View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11113_high_16 (Length: 236)
Name: NF11113_high_16
Description: NF11113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11113_high_16 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 12365900 - 12366135
Alignment:
| Q |
1 |
aataacaagagttttggaggtttgtttaaaattaaaatgaaatggtaatgaccaaagtggaattgtatgaaagttaaggggtcgtagtgggtggtgacga |
100 |
Q |
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| T |
12365900 |
aataacaagagttttggaggtttgtttaaaattaaaatgaaatggtgatgaccaaagtggaattgtatgaaagttaaggggtggtggtgggtggtgacga |
12365999 |
T |
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| Q |
101 |
aagttgtcagtaggtagtgtcagtgtaactttatctttatcctaaagagtctgaactgtgaatcattcattcataattacttccttttaatgcttttggc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12366000 |
aagttgtcagtaggtagtgtcagtgtaactttatctttatcctaaagagtctgaactgtgaatcattcattcataattacttccttttaatgcttttggc |
12366099 |
T |
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| Q |
201 |
cctagcaagacgtgacgtttctgaaacattttatct |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
12366100 |
cctagcaagacgtgacgtttctgaaacattttatct |
12366135 |
T |
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