View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11114_high_11 (Length: 243)
Name: NF11114_high_11
Description: NF11114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11114_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 21390644 - 21390859
Alignment:
| Q |
18 |
aacaaccggcggggagcacctcacgatcgcgcacagtaactaggagtccccnnnnnnnnnnnnnnnnacaccaaaggcaaacttcaattcacaatcgaac |
117 |
Q |
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| T |
21390644 |
aacaaccggcggggagcacctcacgatcgcgcacagtaactaggagtccctttttttttttttttttacaccaaaggcaaacttcaattcacaatcgaac |
21390743 |
T |
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| Q |
118 |
ttacactttatgatatgaaggcaacccaaagaatagacaggtaggagcctattcacgcgcctatcgatcaatgtaatccaactagtaactagtgccctta |
217 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
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| T |
21390744 |
ttagactttatgatatgaaggcaacccaaagaatagacaggtaggagcctattcacgcgcctatggatcaatgtaacccaactagtaactagtgccctta |
21390843 |
T |
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| Q |
218 |
atggacctctcctatg |
233 |
Q |
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|||||||||||||||| |
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| T |
21390844 |
atggacctctcctatg |
21390859 |
T |
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