View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11115_low_9 (Length: 318)

Name: NF11115_low_9
Description: NF11115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11115_low_9
NF11115_low_9
[»] chr4 (44 HSPs)
chr4 (17-290)||(4719912-4720176)
chr4 (53-277)||(11083576-11083811)
chr4 (53-277)||(14297403-14297638)
chr4 (53-277)||(14315652-14315887)
chr4 (53-277)||(21538022-21538257)
chr4 (53-277)||(51683480-51683705)
chr4 (53-277)||(21022458-21022683)
chr4 (53-277)||(50275012-50275237)
chr4 (53-277)||(1089154-1089379)
chr4 (53-277)||(1308684-1308909)
chr4 (54-277)||(48256142-48256366)
chr4 (53-277)||(10752997-10753232)
chr4 (53-277)||(10966766-10967001)
chr4 (53-277)||(30726311-30726536)
chr4 (53-277)||(37021653-37021878)
chr4 (91-277)||(50901758-50901945)
chr4 (53-277)||(67869-68094)
chr4 (53-277)||(55407357-55407582)
chr4 (51-277)||(41933191-41933418)
chr4 (53-182)||(11050093-11050222)
chr4 (53-277)||(40357850-40358075)
chr4 (53-246)||(46436553-46436747)
chr4 (53-182)||(50023113-50023242)
chr4 (53-182)||(44679645-44679774)
chr4 (53-168)||(6181360-6181475)
chr4 (53-168)||(9892838-9892953)
chr4 (53-168)||(49090808-49090923)
chr4 (53-168)||(49165421-49165536)
chr4 (53-182)||(50030231-50030360)
chr4 (53-129)||(50193906-50193982)
chr4 (53-182)||(30704397-30704526)
chr4 (91-160)||(41798603-41798672)
chr4 (53-168)||(31422085-31422201)
chr4 (227-279)||(55279988-55280040)
chr4 (91-182)||(3184330-3184421)
chr4 (91-182)||(3185492-3185583)
chr4 (91-182)||(3185700-3185791)
chr4 (241-279)||(6181549-6181587)
chr4 (241-279)||(49090696-49090734)
chr4 (241-279)||(49165309-49165347)
chr4 (226-279)||(3184232-3184285)
chr4 (230-279)||(31421973-31422022)
chr4 (226-279)||(50023287-50023340)
chr4 (226-279)||(50193754-50193807)
[»] chr3 (48 HSPs)
chr3 (31-290)||(31045142-31045401)
chr3 (53-277)||(42756431-42756654)
chr3 (53-277)||(4007893-4008118)
chr3 (53-277)||(42165440-42165665)
chr3 (53-277)||(48889021-48889246)
chr3 (54-277)||(20917588-20917812)
chr3 (54-277)||(20926550-20926774)
chr3 (53-277)||(597036-597261)
chr3 (53-277)||(3975984-3976209)
chr3 (53-277)||(49196017-49196242)
chr3 (53-277)||(44229991-44230216)
chr3 (53-277)||(47073777-47074002)
chr3 (91-277)||(50216486-50216673)
chr3 (91-277)||(50963232-50963419)
chr3 (56-277)||(30255575-30255797)
chr3 (54-161)||(4178198-4178305)
chr3 (54-277)||(4172084-4172307)
chr3 (53-236)||(42805832-42806016)
chr3 (91-277)||(3501500-3501687)
chr3 (53-168)||(52390966-52391081)
chr3 (53-168)||(16611465-16611580)
chr3 (53-168)||(22047673-22047788)
chr3 (53-168)||(29009247-29009362)
chr3 (53-182)||(17567634-17567763)
chr3 (53-182)||(41612741-41612870)
chr3 (53-168)||(42903760-42903875)
chr3 (53-168)||(46389349-46389464)
chr3 (53-160)||(48563323-48563430)
chr3 (53-168)||(50480354-50480469)
chr3 (53-168)||(54386511-54386626)
chr3 (112-277)||(51807247-51807413)
chr3 (53-168)||(2274484-2274599)
chr3 (91-182)||(36127810-36127901)
chr3 (53-168)||(49144033-49144147)
chr3 (53-168)||(34045764-34045878)
chr3 (53-128)||(46701595-46701670)
chr3 (53-182)||(20351018-20351147)
chr3 (226-279)||(17567808-17567861)
chr3 (230-279)||(34045652-34045701)
chr3 (226-279)||(49144206-49144259)
chr3 (209-277)||(48563221-48563289)
chr3 (226-277)||(4178082-4178133)
chr3 (241-279)||(46389237-46389275)
chr3 (241-279)||(46701784-46701822)
chr3 (241-279)||(54386399-54386437)
chr3 (226-279)||(20350920-20350973)
chr3 (226-279)||(41612643-41612696)
chr3 (226-279)||(50480528-50480581)
[»] scaffold0007 (2 HSPs)
scaffold0007 (17-289)||(251010-251282)
scaffold0007 (81-143)||(246167-246229)
[»] chr7 (33 HSPs)
chr7 (17-277)||(17740982-17741253)
chr7 (53-277)||(39460806-39461031)
chr7 (53-277)||(10517258-10517483)
chr7 (53-277)||(15073798-15074023)
chr7 (53-277)||(36977876-36978101)
chr7 (53-277)||(47776612-47776837)
chr7 (53-277)||(17835354-17835579)
chr7 (53-276)||(42507597-42507821)
chr7 (53-277)||(47672655-47672880)
chr7 (53-277)||(27453189-27453414)
chr7 (53-277)||(37340582-37340807)
chr7 (53-277)||(9494365-9494590)
chr7 (53-277)||(34738644-34738869)
chr7 (53-168)||(41880878-41880993)
chr7 (53-168)||(48403745-48403860)
chr7 (53-182)||(46740117-46740246)
chr7 (54-277)||(14689629-14689853)
chr7 (53-168)||(35609986-35610101)
chr7 (91-168)||(17465329-17465406)
chr7 (91-168)||(17587808-17587885)
chr7 (54-182)||(556217-556345)
chr7 (53-182)||(45257362-45257490)
chr7 (53-129)||(5541110-5541186)
chr7 (53-129)||(16675213-16675289)
chr7 (53-129)||(17649581-17649657)
chr7 (53-123)||(9370960-9371030)
chr7 (226-277)||(556390-556441)
chr7 (228-279)||(5541286-5541336)
chr7 (241-279)||(9371145-9371183)
chr7 (241-279)||(35610175-35610213)
chr7 (226-279)||(16675049-16675102)
chr7 (226-279)||(17649417-17649470)
chr7 (226-279)||(41734439-41734492)
[»] chr8 (36 HSPs)
chr8 (17-278)||(22495185-22495456)
chr8 (53-277)||(24249761-24249985)
chr8 (53-277)||(39601993-39602218)
chr8 (53-271)||(5303791-5304010)
chr8 (53-274)||(15036298-15036520)
chr8 (53-277)||(39846556-39846781)
chr8 (53-277)||(42485108-42485333)
chr8 (53-246)||(39252320-39252514)
chr8 (53-277)||(40076820-40077045)
chr8 (53-277)||(43211783-43212008)
chr8 (54-277)||(43188327-43188551)
chr8 (53-168)||(37327171-37327286)
chr8 (53-277)||(2984400-2984625)
chr8 (53-277)||(489199-489424)
chr8 (53-277)||(34822587-34822812)
chr8 (53-182)||(35552039-35552168)
chr8 (53-182)||(45128123-45128252)
chr8 (53-277)||(39938786-39939011)
chr8 (110-277)||(41249700-41249868)
chr8 (53-168)||(25097-25212)
chr8 (53-168)||(1052912-1053027)
chr8 (53-168)||(23021891-23022006)
chr8 (53-168)||(26659834-26659949)
chr8 (53-182)||(20857659-20857788)
chr8 (193-277)||(37327082-37327165)
chr8 (194-277)||(25864652-25864734)
chr8 (226-279)||(5677346-5677399)
chr8 (53-129)||(34371464-34371540)
chr8 (226-277)||(45128027-45128078)
chr8 (53-117)||(45064670-45064734)
chr8 (214-277)||(45064519-45064582)
chr8 (241-279)||(25286-25324)
chr8 (241-279)||(22510816-22510854)
chr8 (241-279)||(26659722-26659760)
chr8 (226-279)||(20857561-20857614)
chr8 (226-279)||(23022065-23022118)
[»] chr1 (37 HSPs)
chr1 (17-273)||(17514230-17514497)
chr1 (53-277)||(52802409-52802634)
chr1 (54-277)||(23275674-23275899)
chr1 (53-277)||(35258443-35258668)
chr1 (53-277)||(51320992-51321217)
chr1 (53-277)||(19925020-19925245)
chr1 (53-277)||(30890339-30890564)
chr1 (51-277)||(31783296-31783523)
chr1 (53-277)||(45825154-45825380)
chr1 (58-277)||(47502593-47502813)
chr1 (98-277)||(49857558-49857738)
chr1 (91-277)||(19527151-19527338)
chr1 (55-182)||(47656244-47656371)
chr1 (78-279)||(25147569-25147780)
chr1 (94-182)||(23935576-23935664)
chr1 (53-182)||(21141401-21141530)
chr1 (53-182)||(50343539-50343668)
chr1 (53-168)||(2365624-2365739)
chr1 (53-168)||(3731951-3732066)
chr1 (194-277)||(11196158-11196241)
chr1 (53-168)||(13639593-13639708)
chr1 (53-168)||(19156403-19156518)
chr1 (53-168)||(26876045-26876160)
chr1 (51-182)||(22524509-22524638)
chr1 (53-182)||(2424938-2425065)
chr1 (53-182)||(97518-97647)
chr1 (91-168)||(8474173-8474250)
chr1 (53-129)||(38127052-38127128)
chr1 (55-151)||(25166954-25167050)
chr1 (194-277)||(11183459-11183542)
chr1 (226-279)||(21141303-21141356)
chr1 (226-279)||(50343713-50343766)
chr1 (241-279)||(3732140-3732178)
chr1 (241-279)||(8474061-8474099)
chr1 (226-279)||(97692-97745)
chr1 (230-279)||(26875933-26875982)
chr1 (226-279)||(38127227-38127280)
[»] chr6 (22 HSPs)
chr6 (17-177)||(21600983-21601143)
chr6 (53-277)||(6320133-6320358)
chr6 (53-277)||(24088352-24088577)
chr6 (17-275)||(29821561-29821821)
chr6 (175-276)||(30424127-30424228)
chr6 (53-182)||(24722302-24722431)
chr6 (53-277)||(31768979-31769208)
chr6 (53-168)||(6201536-6201651)
chr6 (53-168)||(11688503-11688618)
chr6 (53-168)||(22301568-22301683)
chr6 (53-168)||(30829222-30829337)
chr6 (53-182)||(3501543-3501672)
chr6 (54-129)||(26423424-26423499)
chr6 (133-186)||(14216597-14216650)
chr6 (53-129)||(27617142-27617218)
chr6 (91-158)||(3381182-3381249)
chr6 (241-279)||(6201424-6201462)
chr6 (241-279)||(11688391-11688429)
chr6 (211-276)||(14216495-14216561)
chr6 (241-279)||(30829411-30829449)
chr6 (212-273)||(3381055-3381116)
chr6 (226-279)||(3501445-3501498)
[»] chr5 (19 HSPs)
chr5 (53-277)||(8701794-8702019)
chr5 (53-277)||(38968375-38968601)
chr5 (53-277)||(7757602-7757827)
chr5 (53-277)||(19228242-19228467)
chr5 (53-277)||(512342-512567)
chr5 (53-277)||(20422217-20422452)
chr5 (53-277)||(28241369-28241594)
chr5 (51-277)||(40624482-40624718)
chr5 (53-277)||(8580075-8580300)
chr5 (53-277)||(42537427-42537652)
chr5 (54-277)||(14260-14484)
chr5 (53-277)||(17658600-17658825)
chr5 (53-277)||(42942057-42942281)
chr5 (53-182)||(5197347-5197476)
chr5 (55-160)||(28877039-28877144)
chr5 (53-160)||(19040687-19040794)
chr5 (54-168)||(27673224-27673338)
chr5 (53-129)||(30705563-30705639)
chr5 (226-279)||(5197249-5197302)
[»] chr2 (33 HSPs)
chr2 (53-277)||(28468919-28469144)
chr2 (78-276)||(31367308-31367517)
chr2 (53-277)||(21998468-21998693)
chr2 (53-277)||(39947878-39948103)
chr2 (91-277)||(25965098-25965285)
chr2 (53-277)||(45428869-45429094)
chr2 (53-277)||(32955928-32956149)
chr2 (194-276)||(35464316-35464398)
chr2 (53-277)||(17420845-17421070)
chr2 (104-277)||(7185307-7185481)
chr2 (53-182)||(29401174-29401303)
chr2 (51-182)||(45284546-45284677)
chr2 (51-182)||(45291909-45292040)
chr2 (53-182)||(20938270-20938399)
chr2 (53-168)||(3940299-3940414)
chr2 (53-168)||(5352353-5352468)
chr2 (53-168)||(15831516-15831631)
chr2 (53-168)||(30496517-30496632)
chr2 (53-168)||(43978908-43979023)
chr2 (53-277)||(25515380-25515604)
chr2 (53-182)||(36655920-36656049)
chr2 (53-182)||(10828595-10828724)
chr2 (194-277)||(45137144-45137227)
chr2 (53-161)||(43539308-43539416)
chr2 (226-279)||(3940473-3940526)
chr2 (230-279)||(43978796-43978845)
chr2 (226-279)||(45284448-45284501)
chr2 (226-279)||(45291811-45291864)
chr2 (241-279)||(5352241-5352279)
chr2 (241-279)||(30496706-30496744)
chr2 (241-279)||(43539497-43539535)
chr2 (226-278)||(36656094-36656146)
chr2 (91-131)||(45136900-45136940)
[»] scaffold0180 (1 HSPs)
scaffold0180 (53-277)||(15193-15418)
[»] scaffold0634 (1 HSPs)
scaffold0634 (53-277)||(7696-7921)
[»] scaffold0293 (1 HSPs)
scaffold0293 (53-277)||(298-523)
[»] scaffold0238 (2 HSPs)
scaffold0238 (53-168)||(18503-18618)
scaffold0238 (226-277)||(18677-18728)
[»] scaffold0155 (2 HSPs)
scaffold0155 (194-277)||(8481-8564)
scaffold0155 (53-148)||(10762-10857)
[»] scaffold0101 (1 HSPs)
scaffold0101 (194-277)||(40747-40830)
[»] scaffold0877 (2 HSPs)
scaffold0877 (53-168)||(4224-4339)
scaffold0877 (226-279)||(4398-4451)


Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 17 - 290
Target Start/End: Original strand, 4719912 - 4720176
Alignment:
Q  17 acatcattcccatcaactacaattatctataactatctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaa 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  4719912 acatcattcccatcaactacaattatctataactatataaactaagtaaataatcaatgcaattttcatttgggcattttgtcaaacactttgtgtgcaa 4720011  T
Q  117 agtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaacatcaattacagcaattacattcatttaccgattcataa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||    
T  4720012 agtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaacat---------caattacattcatttaccaattcataa 4720102  T
Q  217 actacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactaccagagtttacaac 290  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  4720103 actacacacgcaatcatcaaaatgtcaattcttacgtaaaccctaaccacatgcaaactaccaaaatttacaac 4720176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 11083576 - 11083811
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| | |||||||| | ||||| |||||||| |||||||||||||||||||||||||||| |||||||||| ||  | |||||| |||||||||    
T  11083576 ctaaactaactcaataatcagtacaattttcatttgggcattttgtcaaacactttgtgtgcaaagcatcaaacatactcaaaatgtgttcatttgacac 11083675  T
Q  153 cattcaaaatcacattctacttaaacatcaatta-----------cagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgt 241  Q
    ||||||||| |||||| |  ||| |||||| |||           || ||| |||||||||||| | || ||||||||||||| ||||| |||||| |||    
T  11083676 cattcaaaaccacatttttattatacatcatttaaacagcataggcaacaactacattcatttatcaatacataaactacacatgcaatgatcaaattgt 11083775  T
Q  242 caattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||| |||||||||||||||||||||||||||    
T  11083776 caattcattcataaaccctaaccacatgcaaactac 11083811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 14297638 - 14297403
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| | |||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||| ||  | |||||| ||||| |||    
T  14297638 ctaaactaactcaataatcaatacaattttcatttgggcattttgtcaaacactttgcgtgcaaagtataaaacatactcaaaatgtgttcatttggcac 14297539  T
Q  153 cattcaaaatcacattctacttaaacatcaatta-----------cagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgt 241  Q
    ||||||||| |||||| |  ||| |||||| |||           || ||| |||||||||||| | |||||||||||||||| ||||| || ||| |||    
T  14297538 cattcaaaaccacatttttattatacatcatttaaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatgatgaaattgt 14297439  T
Q  242 caattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||| |||||| ||||||||||||||||||||    
T  14297438 caattcattcataaaacctaaccacatgcaaactac 14297403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 14315887 - 14315652
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| | |||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||| ||  | |||||| ||||| |||    
T  14315887 ctaaactaactcaataatcaatacaattttcatttgggcattttgtcaaacactttgcgtgcaaagtataaaacatactcaaaatgtgttcatttggcac 14315788  T
Q  153 cattcaaaatcacattctacttaaacatcaatta-----------cagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgt 241  Q
    ||||||||| |||||| |  ||| |||||| |||           || ||| |||||||||||| | |||||||||||||||| ||||| || ||| |||    
T  14315787 cattcaaaaccacatttttattatacatcatttaaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatgatgaaattgt 14315688  T
Q  242 caattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||| |||||| ||||||||||||||||||||    
T  14315687 caattcattcataaaacctaaccacatgcaaactac 14315652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 21538022 - 21538257
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||| ||||  |||||||| ||||| ||     
T  21538022 ctaaactaactaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacagattcaaattgtgttcatttggcat 21538121  T
Q  153 cattcaaaatcacattctacttaaacatcaatta-----------cagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgt 241  Q
    ||||||||| |||||| |  |||||||||| |||           || ||| |||||||||||| | ||||||||||||| || |||||  ||||| |||    
T  21538122 cattcaaaaccacattatcattaaacatcatttaaacaacataggcaacaactacattcatttatcaattcataaactacccatgcaatgttcaaattgt 21538221  T
Q  242 caattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||| |||||||||||||||||||||||||||    
T  21538222 caattcattcataaaccctaaccacatgcaaactac 21538257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 51683705 - 51683480
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  51683705 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 51683606  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||   ||| ||| |||||||||||| | ||||||||| |||||| |||||||||||| ||||||||   |     
T  51683605 cattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaattcataaaatacacatgcaatcatcaaattgtcaattttaaa 51683506  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  51683505 atcaaccctaaccacatgcaaactac 51683480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 21022458 - 21022683
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  21022458 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 21022557  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  21022558 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaa 21022657  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  21022658 atcaaccctaaccacatacaaactac 21022683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 50275237 - 50275012
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| || |||||||||  |||| |||||  | |||||| ||||||||||||||||||||| || ||||||||||  |||||||| ||||| |||    
T  50275237 ctaaactaactacataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagcataaaacatattcaaattgtgttcatttgccac 50275138  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||||| | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  50275137 cattcaaagccacattctgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 50275038  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  50275037 attaaccctaaccacatgcaaactac 50275012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 1089154 - 1089379
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  1089154 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 1089253  T
Q  153 cattcaaaatcacatt-ctacttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  ||||||  || ||||||  ||  | || ||  |||||||||||| | || ||||||||||||  ||||| || ||| |||||||||||      
T  1089254 cattcaaagccacattattatttaaactacatatgcaacatctacattcatttatcaatacataaactacacttgcaatgatgaaattgtcaattcattt 1089353  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    ||||| ||||||||||||||||||||    
T  1089354 ataaaacctaaccacatgcaaactac 1089379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 1308684 - 1308909
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| || ||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  1308684 ctaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 1308783  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||  | || ||  |||||||||||| | || ||||||||||||| ||||| || ||| |||||||||||      
T  1308784 cattcaaagccacattataatttaaactacatatgcaacatctacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattt 1308883  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    ||||| ||||||||||||||||||||    
T  1308884 ataaaacctaaccacatgcaaactac 1308909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 277
Target Start/End: Original strand, 48256142 - 48256366
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  ||||| || ||||| ||||    
T  48256142 taaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgttttcatttgccacc 48256241  T
Q  154 attcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcataca 252  Q
    |||||||  |||||| | | ||||||  ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   | |    
T  48256242 attcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaa 48256341  T
Q  253 taaaccctaaccacatgcaaactac 277  Q
    | |||||||||||||||||||||||    
T  48256342 ttaaccctaaccacatgcaaactac 48256366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 10752997 - 10753232
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| |||||||||   |  ||||  ||||| |||    
T  10752997 ctaaactaattaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatatttaaagagtgtccatttgccac 10753096  T
Q  153 cattcaaaatcacattctacttaaacatcaatta--cagca--------at-tacattcatttaccgattcataaactacacacgcaatcatcaaaatgt 241  Q
    ||||||||| |||||| |  |||||||||| |||  |||||        || |||||||||||| | |||||||||||||||| |||||  ||||| |||    
T  10753097 cattcaaaaccacattatcattaaacatcatttaaacagcataggcaacatctacattcatttatcaattcataaactacacatgcaatgttcaaattgt 10753196  T
Q  242 caattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||| |||||||||||||||||||||||||||    
T  10753197 caattcattcataaaccctaaccacatgcaaactac 10753232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 10966766 - 10967001
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| |||||||||   |  ||||  ||||| |||    
T  10966766 ctaaactaattaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatatttaaagagtgtccatttgccac 10966865  T
Q  153 cattcaaaatcacattctacttaaacatcaatta--cagca--------at-tacattcatttaccgattcataaactacacacgcaatcatcaaaatgt 241  Q
    ||||||||| |||||| |  |||||||||| |||  |||||        || |||||||||||| | |||||||||||||||| |||||  ||||| |||    
T  10966866 cattcaaaaccacattatcattaaacatcatttaaacagcataggcaacatctacattcatttatcaattcataaactacacatgcaatgttcaaattgt 10966965  T
Q  242 caattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||| |||||||||||||||||||||||||||    
T  10966966 caattcattcataaaccctaaccacatgcaaactac 10967001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 30726311 - 30726536
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  30726311 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 30726410  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||| |||||||||||| | || ||||||||||||  ||||| || ||| |||||||||||      
T  30726411 cattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaatacataaactacacgtgcaatgatgaaattgtcaattcattt 30726510  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    ||||| |||||||| |||||||||||    
T  30726511 ataaaacctaaccaaatgcaaactac 30726536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 37021653 - 37021878
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||| ||| ||||||  |||||||| ||||| |||    
T  37021653 ctaaactaactaaataatcaataaaattgtcattgaagcattttatcaaacactttgtgtgcaaagtataaaagatattcaaattgtgttcatttgccac 37021752  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||  | || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  37021753 cattcaaagccacattatgatttaaacaacatatgcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 37021852  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || ||| |||||||||| ||||||||    
T  37021853 atcaactctaaccacatacaaactac 37021878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 277
Target Start/End: Complemental strand, 50901945 - 50901758
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacag 189  Q
    |||||| |||||||||||||||||||| ||| ||||||||||  |||||||| |||| ||||||||||||  |||||| | | ||||||| ||   |||     
T  50901945 cattttatcaaacactttgtgtgcaaaatataaaacatattcaaattgtgttcatttaacaccattcaaagccacattatgaattaaacaacatagacaa 50901846  T
Q  190 caattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   | || ||||||||||||||| |||||||    
T  50901845 caactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgtaaactac 50901758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 68094 - 67869
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  ||||||||||| |||||||||||| ||||||||||  |||||||| |||||  ||    
T  68094 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttatgtgcaaagtataaaacatattcaaattgtgttcatttgctac 67995  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||| ||||| | |||||||||||||||| |||||||| ||| ||||||||   |     
T  67994 cattcaaagccacattatcatttaaacaacataggcaacaactacatttatttatcaattcataaactacacatgcaatcattaaattgtcaattttaaa 67895  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  67894 atcaaccctaaccacatgcaaactac 67869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 55407357 - 55407582
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| ||| |  | ||||   ||||||| |||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  55407357 ctaaactaactaaataatcaatataattttcaatgaggcattcgatcaaacattttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 55407456  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | || |||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  55407457 cattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 55407556  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  55407557 atcaaccctaaccacatgcaaactac 55407582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 51 - 277
Target Start/End: Original strand, 41933191 - 41933418
Alignment:
Q  51 atctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgac 150  Q
    ||||||||||| | ||||||||||  |||| ||||| || | |||| |||||||||||||||||||||||||||||||||||  ||  | || |||||||    
T  41933191 atctaaactaactcaataatcaatataattttcattggggctttttatcaaacactttgtgtgcaaagtatcaaacatattcaaataatcttcatttgac 41933290  T
Q  151 accattcaaaatcacattctactt-----------aaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaat 239  Q
    ||||||||||| |||||| |||||           |||||||||||||| ||| |||||||||||        |||||||  ||| ||||||||||||||    
T  41933291 accattcaaaaccacattgtacttaaaacacattcaaacatcaattacaacaactacattcattt--------ataaact--acatgcaatcatcaaaat 41933380  T
Q  240 gtcaattcatacataaaccctaaccacatgcaaactac 277  Q
     ||||||| ||||| ||||||| |||||||||||||||    
T  41933381 atcaattcctacatcaaccctatccacatgcaaactac 41933418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 11050093 - 11050222
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| ||||| |||||||||||||||||||||||||||||  |||||||| ||||| |||    
T  11050093 ctaaactaactaaataatcaatataattttcattgatgcattttatcaaatactttgtgtgcaaagtatcaaacatattcaaattgtgttcatttggcac 11050192  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  11050193 cattcaaaaccacattatactctaacatca 11050222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 40357850 - 40358075
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||| ||||||||||||| ||||||||||  | |||||| ||||| |||    
T  40357850 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttggtgtgcaaagtataaaacatattcaaactgtgttcatttgccac 40357949  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||| ||| | |||  ||||||||||| |||||||||||| | ||||||   |     
T  40357950 cattcaaatccacattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaa 40358049  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  40358050 atcaaccctaaccacatacaaactac 40358075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 46436747 - 46436553
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  ||||  ||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  46436747 ctaaactaactaaataatcaataaaattgccattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 46436648  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaatt 246  Q
    |||||| || |||| | | | ||||||| ||    || ||| ||||||| ||||   |||||||||||||||| |||||||||||| ||||||||    
T  46436647 cattcagaaccacaatatcatttaaacagcataagcaacaactacattcgtttattaattcataaactacacatgcaatcatcaaattgtcaatt 46436553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 50023113 - 50023242
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  50023113 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 50023212  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  50023213 cattcaaaaccacattatactctaacatca 50023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 44679645 - 44679774
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||| |||  |||||    |||||| |||||||||||||||||||| ||||||||||| ||  | ||||||  |||| |||    
T  44679645 ctaaactaactaaataatcaatgaaatggtcattgaaacattttatcaaacactttgtgtgcaaaatatcaaacatactcaaaatgtgttcttttgccac 44679744  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    |||||||||||||||| ||||  |||||||    
T  44679745 cattcaaaatcacattatactctaacatca 44679774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 6181360 - 6181475
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  6181360 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 6181459  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  6181460 caatcaaaaccacatt 6181475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 9892838 - 9892953
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  9892838 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 9892937  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  9892938 cattcaaaaccacatt 9892953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 49090923 - 49090808
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  49090923 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 49090824  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  49090823 caatcaaaaccacatt 49090808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 49165536 - 49165421
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||| ||||||||||| ||  | ||||||| |||| |||    
T  49165536 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaactatcaaacatactcaaaatgtgttattttgccac 49165437  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  49165436 cattcaaaaccacatt 49165421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 50030231 - 50030360
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| |||||||||| |  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  50030231 ctaaactaactaaataatcagtaaaattgtcattgatgcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 50030330  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  50030331 cattcaaaaccacattatactctaacatca 50030360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 50193982 - 50193906
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacata 129  Q
    ||||||||||||||||||||||  |||| |||||  | |||||| ||||||||||| ||||||||||||||||||||    
T  50193982 ctaaactaagtaaataatcaataaaattgtcattgagacattttatcaaacactttatgtgcaaagtatcaaacata 50193906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 30704526 - 30704397
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  |  ||||| |||||||||||||||||||||||||||||||| |   | ||||||  |||  |||    
T  30704526 ctaaactaactaaataatcaataaaattgtcattgagatattttatcaaacactttgtgtgcaaagtatcaaacatactaaaaatgtgttcttttcccac 30704427  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    |||||||||| ||||| ||||  |||||||    
T  30704426 cattcaaaattacattatactctaacatca 30704397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 41798603 - 41798672
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaa 160  Q
    |||||| |||||||||||||||||||||||| ||||||||||  |||||||| |||||  ||||||||||    
T  41798603 cattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgctaccattcaaa 41798672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 31422201 - 31422085
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcatttt-gtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgaca 151  Q
    ||||||||| ||||||||||||  |||| |||||    ||||||  |||||||||||||||||||||||||||||||| ||  | ||||||| |||| ||    
T  31422201 ctaaactaactaaataatcaataaaattgtcattgacacattttattcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcca 31422102  T
Q  152 ccattcaaaatcacatt 168  Q
    ||| |||||| ||||||    
T  31422101 ccaatcaaaaccacatt 31422085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 55279988 - 55280040
Alignment:
Q  227 caatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  55279988 caatcatcaaaatgtcaattcctacatcaaccttaaccacatgcgaactacca 55280040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 3184421 - 3184330
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaacatca 182  Q
    |||||| |||||||||||| ||||||||||||||||||| ||  | |||| |  |||| |||||||||||| |||||| ||||  |||||||    
T  3184421 cattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatgtgatcttttgccaccattcaaaaccacattatactctaacatca 3184330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 3185492 - 3185583
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaacatca 182  Q
    |||||| |||||||||||| ||||||||||||||||||| ||  | |||| |  |||| |||||||||||| |||||| ||||  |||||||    
T  3185492 cattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatgtgatcttttgccaccattcaaaaccacattatactctaacatca 3185583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 3185700 - 3185791
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaacatca 182  Q
    |||||| |||||||||||| ||||||||||||||||||| ||  | |||| |  |||| |||||||||||| |||||| ||||  |||||||    
T  3185700 cattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatgtgatcttttgccaccattcaaaaccacattatactctaacatca 3185791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 6181549 - 6181587
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  6181549 tcaattcatacattaaccctaaccacatgaaaactacca 6181587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 49090734 - 49090696
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  49090734 tcaattcatacattaaccctaaccacatgaaaactacca 49090696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 49165347 - 49165309
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  49165347 tcaattcatacattaaccctaaccacatgaaaactacca 49165309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 3184285 - 3184232
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||    
T  3184285 gcaatcatcaaaaattcaattcctacatcaaccctaaacacatgaaaactacca 3184232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 31422022 - 31421973
Alignment:
Q  230 tcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||| |||| |||||||| ||||| ||||||||||||||| |||||||||    
T  31422022 tcataaaaaagtcaattcctacatcaaccctaaccacatgaaaactacca 31421973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 50023287 - 50023340
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||  |||||||||    
T  50023287 gcaatcatcaaaaattcaattcctacatcaaccctaaccacataaaaactacca 50023340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 50193807 - 50193754
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| |||||||||| |||| |||||||||    
T  50193807 gcaatcatcaaaaattcaattcctacatcaaccctaaccccatgaaaactacca 50193754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 8e-95; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 31 - 290
Target Start/End: Original strand, 31045142 - 31045401
Alignment:
Q  31 aactacaattatctataactatctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatat 130  Q
    |||||||||||||||||||||  |||||||| |||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  31045142 aactacaattatctataactacataaactaactaaataataaatgcaattctcattttggcattttgtcaaacactttgtgtgcaaagtatcaaacatat 31045241  T
Q  131 tctcattgtgttaatttgacaccattcaaaatcacattctacttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaat 230  Q
    || |||||||||| ||||||||||||||||| |||||| |||||||||||||||||||  || ||||||| |||| | ||| |||||||||||| |||||    
T  31045242 tcacattgtgttattttgacaccattcaaaaccacattttacttaaacatcaattacattaactacattcgtttatcaatttataaactacacatgcaat 31045341  T
Q  231 catcaaaatgtcaattcatacataaaccctaaccacatgcaaactaccagagtttacaac 290  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  31045342 catcaaaatgtcaattcattcataaaccctaaccacatgcaaactaccaaaatttacaac 31045401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 42756654 - 42756431
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  42756654 ctaaactaactaaataatcaat--aattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 42756557  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||   ||||| | | ||||||| ||   ||| ||| ||||| |||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  42756556 cattcaaagcgacattatgatttaaacaacatagacaacaactacatccatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 42756457  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  42756456 atcaaccctaaccacatgcaaactac 42756431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 4007893 - 4008118
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  4007893 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 4007992  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| ||||||||| || ||||||||   |     
T  4007993 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcgaattgtcaattttaaa 4008092  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  4008093 atcaaccctaaccacatacaaactac 4008118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 42165665 - 42165440
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||| ||||||  |||||||| ||||| |||    
T  42165665 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaatatattcaaattgtgttcatttgccac 42165566  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  42165565 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 42165466  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  42165465 atcaaccctaaccacatacaaactac 42165440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 48889246 - 48889021
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | | |||  |||||||||||||||||||||||| ||||||||||  ||| |||| ||||  |||    
T  48889246 ctaaactaactaaataatcaatataattttcattgaggcctttgatcaaacactttgtgtgcaaagtataaaacatattcaaattatgttcatttaccac 48889147  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    |||||||| ||||||| | | ||||||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  48889146 cattcaaagtcacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 48889047  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  48889046 atcaaccctaaccacatgcaaactac 48889021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 277
Target Start/End: Original strand, 20917588 - 20917812
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| ||||    
T  20917588 taaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccacc 20917687  T
Q  154 attcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcataca 252  Q
    |||||||  |||||| | | || |||| ||    || ||| |||||||||||| | |||||||||||| ||| |||||||||||| ||||||||   | |    
T  20917688 attcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaactatacatgcaatcatcaaattgtcaattttaaaa 20917787  T
Q  253 taaaccctaaccacatgcaaactac 277  Q
    | |||||||||||||||||||||||    
T  20917788 tcaaccctaaccacatgcaaactac 20917812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 277
Target Start/End: Original strand, 20926550 - 20926774
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| ||||    
T  20926550 taaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccacc 20926649  T
Q  154 attcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcataca 252  Q
    |||||||  |||||| | | || |||| ||    || ||| |||||||||||| | |||||||||||| ||| |||||||||||| ||||||||   | |    
T  20926650 attcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaactatacatgcaatcatcaaattgtcaattttaaaa 20926749  T
Q  253 taaaccctaaccacatgcaaactac 277  Q
    | |||||||||||||||||||||||    
T  20926750 tcaaccctaaccacatgcaaactac 20926774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 597261 - 597036
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    |||| |||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  597261 ctaagctaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtatcaaacataatcaaaatgtgttcttttgccac 597162  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| |||||||   ||     
T  597161 cattcaaagccacattatgatttaaacaacatgggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaatatttaa 597062  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  597061 atcaaccctaaccacatgcaaactac 597036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 3976209 - 3975984
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  3976209 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 3976110  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||| |||||||| || || |||  ||||||||||| |||||||||||| ||||||||  ||     
T  3976109 cattcaaagccacattatgatttaaactacataggcaacaactacattcaattgccaatttctaaactacacatgcaatcatcaaattgtcaatttttaa 3976010  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  3976009 atcaaccctaaccacatacaaactac 3975984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 49196017 - 49196242
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  49196017 ctaaactaactaaataatcaatataattttcattgaagcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 49196116  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | || |||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  49196117 cattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 49196216  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||| ||||||||||||||||||    
T  49196217 atcaaccttaaccacatgcaaactac 49196242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 44230216 - 44229991
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    |||||| || ||||||||||||  |||| |||||  | |||||| |||||||| ||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  44230216 ctaaaccaactaaataatcaataaaattgtcattgaggcattttatcaaacacattgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 44230117  T
Q  153 cattcaaaatcacattctactt-aaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    | ||||||  |||||| |  || ||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  44230116 cgttcaaagccacattatgttttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 44230017  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  44230016 atcaaccctaaccacatgcaaactac 44229991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 47073777 - 47074002
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||| ||||||  |||||||| ||||| |||    
T  47073777 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaatatattcaaattgtgttcatttgccac 47073876  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | |||||||  |    || ||| |||||||||||| | |||| ||||||||||| ||| |||||||| ||||||||   |     
T  47073877 cattcaaagccacattatgatttaaacaatataggcaacaactacattcatttatcaattcctaaactacacatgcattcatcaaattgtcaattttaaa 47073976  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  47073977 atcaaccctaaccacatacaaactac 47074002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 277
Target Start/End: Original strand, 50216486 - 50216673
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacag 189  Q
    |||||| ||||||||||||||||||||| || ||||||||||  |||||||| ||||| |||||||||||| |||||| | | ||||||| ||    ||     
T  50216486 cattttatcaaacactttgtgtgcaaagcataaaacatattcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggcaa 50216585  T
Q  190 caattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||| |||||||||||| | |||| |||| |||||| |||||||||||| | ||||||   | || |||||||||||||||||||||||    
T  50216586 caactacattcatttatcaattcctaaattacacatgcaatcatcaaattatcaattttaaaatcaaccctaaccacatgcaaactac 50216673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 277
Target Start/End: Complemental strand, 50963419 - 50963232
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacag 189  Q
    |||||| |||||||||||||||| ||||||| ||||||||||  |||||||| ||||| |||||||||||  |||||| | | ||||||| ||    ||     
T  50963419 cattttatcaaacactttgtgtgtaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaa 50963320  T
Q  190 caattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   | || |||||||||||||| ||||||||    
T  50963319 caactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactac 50963232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 277
Target Start/End: Original strand, 30255575 - 30255797
Alignment:
Q  56 aactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccat 155  Q
    |||||| ||||||||||||  || | |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| ||||||    
T  30255575 aactaactaaataatcaatataaatttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccat 30255674  T
Q  156 tcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacata 254  Q
    |||||  |||||| | | ||||||| ||    || ||| |||||||||||| | ||||| |||||| ||| |||||||||||| |||||| |   | ||     
T  30255675 tcaaagccacattatgatttaaacaacataggcaacaactacattcatttagcaattcacaaactaaacatgcaatcatcaaattgtcaactttaaaatc 30255774  T
Q  255 aaccctaaccacatgcaaactac 277  Q
    |||||||||||||||||||||||    
T  30255775 aaccctaaccacatgcaaactac 30255797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 4178305 - 4178198
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| ||||||||||||  |||| |||||||| |||||||||||||||||||||||||||||||||||  |||||  ||| | || ||||||||||    
T  4178305 taaactaactaaataatcaataaaattttcatttgggcattttgtcaaacactttgtgtgcaaagtatcaaaagtattcaaattatcttcatttgacacc 4178206  T
Q  154 attcaaaa 161  Q
    ||||||||    
T  4178205 attcaaaa 4178198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 54 - 277
Target Start/End: Complemental strand, 4172307 - 4172084
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||||||||||||||||  |||||  ||| | || |||| |||||    
T  4172307 taaactaactaaataatcaataaaattctcatttgggcattttgtcaaacactttttgtgcaaagtatcaaaagtattcaaattatcttcatttaacacc 4172208  T
Q  154 attcaaaatcacattctactta-----------aacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtc 242  Q
    |||||||| |||| | ||||||           ||||||||||||| ||  |||||||||||        |||||||  ||| |||||||||||||| ||    
T  4172207 attcaaaa-cacactgtacttaaaacacgttcgaacatcaattacaacagctacattcattt--------ataaact--acatgcaatcatcaaaatatc 4172119  T
Q  243 aattcatacataaaccctaaccacatgcaaactac 277  Q
    ||||| ||||| ||||||||| |||||||||||||    
T  4172118 aattcctacatcaaccctaacaacatgcaaactac 4172084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 53 - 236
Target Start/End: Original strand, 42805832 - 42806016
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  ||||||| |||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  42805832 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacattttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 42805931  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaa 236  Q
    ||||||||  |||||| | | ||||||| ||   ||| ||| |||||||||||| | |||||||||||| ||| ||||| |||||    
T  42805932 cattcaaagccacattatcatttaaacaacatagacaacaactacattcatttatcaattcataaactatacatgcaattatcaa 42806016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 277
Target Start/End: Original strand, 3501500 - 3501687
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacag 189  Q
    |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||||||||||  |||||| | | ||||||| ||    ||     
T  3501500 cattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaacataggcaa 3501599  T
Q  190 caattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||| |||||||| ||| | |||  ||||||||||| |||||||||||| | ||||||   | || |||||||||||||| ||||||||    
T  3501600 caactacattcaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaactac 3501687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 52390966 - 52391081
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  | || |||||    |||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||| |||    
T  52390966 ctaaactaactaaataatcaataaatttgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttattttgccac 52391065  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  52391066 cattcaaaaccacatt 52391081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 16611580 - 16611465
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  16611580 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 16611481  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  16611480 cattcaaaaccacatt 16611465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 22047673 - 22047788
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  22047673 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 22047772  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  22047773 cattcaaaaccacatt 22047788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 29009362 - 29009247
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  29009362 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 29009263  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  29009262 cattcaaaaccacatt 29009247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 17567634 - 17567763
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  17567634 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 17567733  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    |||| |||| |||||| ||||  |||||||    
T  17567734 cattgaaaaccacattatactctaacatca 17567763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 41612870 - 41612741
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| || |||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  41612870 ctaaactaactagataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 41612771  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  41612770 cattcaaaaccacattatactctaacatca 41612741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 42903760 - 42903875
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  42903760 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 42903859  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  42903860 caatcaaaaccacatt 42903875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 46389464 - 46389349
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  46389464 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 46389365  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  46389364 caatcaaaaccacatt 46389349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 48563430 - 48563323
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  ||||||| |||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  48563430 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacattttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 48563331  T
Q  153 cattcaaa 160  Q
    ||||||||    
T  48563330 cattcaaa 48563323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 50480354 - 50480469
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  50480354 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 50480453  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  50480454 caatcaaaaccacatt 50480469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 54386626 - 54386511
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  54386626 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 54386527  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  54386526 caatcaaaaccacatt 54386511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 112 - 277
Target Start/End: Complemental strand, 51807413 - 51807247
Alignment:
Q  112 tgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgat 210  Q
    |||||||||| ||||||||||  |||||||| ||||| |||||||||||  |||||| | | ||||||| ||   ||| ||| |||||||||||| | ||    
T  51807413 tgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaat 51807314  T
Q  211 tcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |  ||||||||||| |||||||||||| ||||||||   | || || | ||||||||||||||||||    
T  51807313 ttctaaactacacatgcaatcatcaaattgtcaattttaaaatcaatcataaccacatgcaaactac 51807247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 2274484 - 2274599
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||  |||    
T  2274484 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttcccac 2274583  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  2274584 cattcaaaaccacatt 2274599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 36127901 - 36127810
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaacatca 182  Q
    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||||||||||| |||||| ||||  |||||||    
T  36127901 cattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccaccattcaaaaccacattatactctaacatca 36127810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 49144033 - 49144147
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||| ||||||  | ||||||| |||| |||    
T  49144033 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaa-atattcaaaatgtgttattttgccac 49144131  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  49144132 caatcaaaaccacatt 49144147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 34045878 - 34045764
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||| ||| ||  | ||||||| |||| |||    
T  34045878 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaa-atactcaaaatgtgttattttgccac 34045780  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  34045779 caatcaaaaccacatt 34045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 46701595 - 46701670
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacat 128  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||    
T  46701595 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacat 46701670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 20351147 - 20351018
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttg-tcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgaca 151  Q
    ||||||||| ||||||||||||  |||| |||||  | ||||||  |||||||||||||||||||||||||||||||| ||  | ||||||  |||| ||    
T  20351147 ctaaactaactaaataatcaataaaattgtcattgagacattttaatcaaacactttgtgtgcaaagtatcaaacatactc-aaatgtgttcttttgcca 20351049  T
Q  152 ccattcaaaatcacattctacttaaacatca 182  Q
    |||||||||| || ||| ||||  |||||||    
T  20351048 ccattcaaaaccaaattatactctaacatca 20351018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 17567808 - 17567861
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||| |||||||||    
T  17567808 gcaatcatcaaaaattcaattcctacatcaaccctaaccacatgaaaactacca 17567861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 34045701 - 34045652
Alignment:
Q  230 tcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||  ||||||||||||| ||||||||||||||| |||||||||    
T  34045701 tcatcaaaaattcaattcatacattaaccctaaccacatgaaaactacca 34045652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 49144206 - 49144259
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||| |||||||||  ||||||||||||| ||||||||||||||| |||||||||    
T  49144206 gcactcatcaaaaattcaattcatacattaaccctaaccacatgaaaactacca 49144259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 48563289 - 48563221
Alignment:
Q  209 attcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||||||| |||||||| |||||||||||| ||||||||   | || |||| ||||||||||||||||||    
T  48563289 attcatagactacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaactac 48563221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 4178133 - 4178082
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||||||||| ||||||| ||||| |||||||||  ||||||||||||    
T  4178133 gcaatcatcaaaatatcaattcctacatcaaccctaacagcatgcaaactac 4178082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 46389275 - 46389237
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  46389275 tcaattcatacattaaccctaaccacatgaaaactacca 46389237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 46701784 - 46701822
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  46701784 tcaattcatacattaaccctaaccacatgaaaactacca 46701822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 54386437 - 54386399
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  54386437 tcaattcatacattaaccctaaccacatgaaaactacca 54386399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 20350973 - 20350920
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||| ||||  ||||||| ||||| ||||||||||||||| |||||||||    
T  20350973 gcaatcataaaaaattcaattcctacatcaaccctaaccacatgaaaactacca 20350920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 41612696 - 41612643
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||| |||||||  ||||||| ||||| ||||||||||||||| |||||||||    
T  41612696 gcaattatcaaaaattcaattcctacattaaccctaaccacatgaaaactacca 41612643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 50480528 - 50480581
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||| |||| |||| |||||||| ||||| ||||||||||||||| |||||||||    
T  50480528 gcactcataaaaaagtcaattcctacatcaaccctaaccacatgaaaactacca 50480581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 169; Significance: 1e-90; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 251010 - 251282
Alignment:
Q  17 acatcattcccatcaactacaattatctataactatctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaa 116  Q
    |||| |||| |||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||  ||||||||||| |||||| |||| ||    
T  251010 acatgattctcatcaactacaattatctataactacaaaaactaagtaaataatcaatgcaattttcatttgagcattttgtcaatcactttatgtgtaa 251109  T
Q  117 agtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaacatcaattacagcaattacattcatttaccgattcataa 216  Q
    | ||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||| | ||||||||    
T  251110 aatatcaaacatattcttattgtgttaatttgacaccattcaaaaccacattcttcttaaacatcaattacatcaactacattcatttatcaattcataa 251209  T
Q  217 actacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactaccagagtttacaa 289  Q
    |||||||| ||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||| | |||||||    
T  251210 actacacatgcaattatcaaaatgccaattcatacgtaaaccctaaccatatgcaaactaccaaaatttacaa 251282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 246229 - 246167
Alignment:
Q  81 ctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgtta 143  Q
    ||||||| | |||||| |||||||||||| ||||||||||| ||||||||  |||||||||||    
T  246229 ctcatttaggcattttatcaaacactttgggtgcaaagtataaaacatatagtcattgtgtta 246167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 4e-72; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 17 - 277
Target Start/End: Original strand, 17740982 - 17741253
Alignment:
Q  17 acatcattcccatcaactacaattatctataactatctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaa 116  Q
    |||||||| ||||||||||||||||| ||||||||  |||||||| ||||||||||||  |||||||||||||  ||||| |||||||||||||||||||    
T  17740982 acatcatttccatcaactacaattatttataactacataaactaactaaataatcaatataattctcatttgggaattttatcaaacactttgtgtgcaa 17741081  T
Q  117 agtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaac-----------atcaattacagcaattacattcattta 205  Q
    ||||||||||||||||  |||||||| || || |||||||||||| |||||| |||||||||           |||||||||| ||| ||||||||||||    
T  17741082 agtatcaaacatattcaaattgtgttcatatggcaccattcaaaaccacattatacttaaacatcatttaaatatcaattacaacaactacattcattta 17741181  T
Q  206 ccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
     | |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  17741182 tcaattcataaactacacatgcaatcttcaaaatgtcaattcattcataaaccctaaccacatgcaaactac 17741253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 39461031 - 39460806
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  39461031 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 39460932  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | |||||||  |    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  39460931 cattcaaagccacattatgatttaaacaaaataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 39460832  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  39460831 atcaaccctaaccacatgcaaactac 39460806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 10517483 - 10517258
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  10517483 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 10517384  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  10517383 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 10517284  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  10517283 atcaaccctaaccacatacaaactac 10517258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 15073798 - 15074023
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  15073798 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 15073897  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||| |||||||||||| | || ||||||||||||| ||||| || ||| |||||||||||      
T  15073898 cattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattt 15073997  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    ||||| ||||||||||||||||||||    
T  15073998 ataaaacctaaccacatgcaaactac 15074023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 36978101 - 36977876
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  ||| |||| ||||  |||    
T  36978101 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattatgttcatttaccac 36978002  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    |||||||| ||||||| | | ||||||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  36978001 cattcaaagtcacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 36977902  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  36977901 atcaaccctaaccacatgcaaactac 36977876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 47776837 - 47776612
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  | || |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  47776837 ctaaactaactaaataatcaataaatttgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgtcac 47776738  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  47776737 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 47776638  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  47776637 atcaaccctaaccacatgcaaactac 47776612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 17835579 - 17835354
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  17835579 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 17835480  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  17835479 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 17835380  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||| ||||||||| ||||||||    
T  17835379 atcaaccttaaccacatacaaactac 17835354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 276
Target Start/End: Original strand, 42507597 - 42507821
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  42507597 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 42507696  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||| |||||||||||| | || ||||||||||||| ||||| || ||| ||| |||||||      
T  42507697 cattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgttaattcattt 42507796  T
Q  252 ataaaccctaaccacatgcaaacta 276  Q
    ||||| |||||||||||||||||||    
T  42507797 ataaaacctaaccacatgcaaacta 42507821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 47672655 - 47672880
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  47672655 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 47672754  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | ||||||| | || ||| |||||||||||| ||||||||   |     
T  47672755 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcatagattatacatgcaatcatcaaattgtcaattttaaa 47672854  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  47672855 atcaaccctaaccacatgcaaactac 47672880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 27453189 - 27453414
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||| | ||||||||||||  |||| ||| |  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  27453189 ctaaactgactaaataatcaataaaattgtcaatgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 27453288  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||     | ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  27453289 cattcaaagccacattatgatttaaacaacataggtaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaa 27453388  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || ||| |||||||||||||||||||    
T  27453389 atcaactctaaccacatgcaaactac 27453414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 37340807 - 37340582
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  37340807 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 37340708  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||  | |||||||||||||||| | |||||||||| ||||||||   |     
T  37340707 cattcaaagccacattatgatttaaacaacataggcaacaagtacattcatttttcaattcataaactacacatgaaatcatcaaattgtcaattttaaa 37340608  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || || ||||||||||| ||||||||    
T  37340607 atcaatcctaaccacatccaaactac 37340582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 9494365 - 9494590
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  9494365 ctaaactaactaaataatcaatataattttcattgacgcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 9494464  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | ||||||||| |||||| |||| ||||||| | ||||||   |     
T  9494465 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaattacacatgcaaccatcaaattttcaattttaaa 9494564  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || ||||| |||||||||||||||||    
T  9494565 atcaacccaaaccacatgcaaactac 9494590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 34738869 - 34738644
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| || |||||||||  |||| ||||   | |||||| |||||||||||||| |||||| || ||||||||||  |||||||| ||||| |||    
T  34738869 ctaaactaactacataatcaataaaattgtcatcgagacattttatcaaacactttgtgagcaaagcataaaacatattcaaattgtgttcatttgccac 34738770  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||     | ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  34738769 cattcaaagccacattatgatttaaacaacataggtaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 34738670  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  34738669 atcaaccctaaccacatgcaaactac 34738644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 41880993 - 41880878
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  41880993 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 41880894  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  41880893 cattcaaaaccacatt 41880878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 48403860 - 48403745
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  48403860 ctaaactaactaaataatcaataaaattatcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 48403761  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  48403760 cattcaaaaccacatt 48403745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 46740117 - 46740246
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||| ||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  46740117 ctaaactaattaaataatcaataaaattgtcattgacacattttatcaatcactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 46740216  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    |||||||||||||||| ||||  |||||||    
T  46740217 cattcaaaatcacattatactctaacatca 46740246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 277
Target Start/End: Original strand, 14689629 - 14689853
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| ||||||||||||  |||| |||||  | |||||  ||||||||||||| |||||||||| ||| ||||||  |||||||| ||||| |||     
T  14689629 taaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtatgcaaagtataaaagatattcaaattgtgtttatttgccact 14689728  T
Q  154 attcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcataca 252  Q
    |||||||   ||||| | | ||||||| ||   ||| ||| |||||||||||| | ||  |||||||||||| ||||| || ||| |||||||||||  |    
T  14689729 attcaaagctacattatcatttaaacaacatagacaacaactacattcatttatcaataaataaactacacatgcaatgatgaaattgtcaattcattta 14689828  T
Q  253 taaaccctaaccacatgcaaactac 277  Q
    | || | ||||||||| ||||||||    
T  14689829 tcaaacttaaccacatacaaactac 14689853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 35609986 - 35610101
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  35609986 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 35610085  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  35610086 caatcaaaaccacatt 35610101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 17465329 - 17465406
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacatt 168  Q
    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||||||||||| ||||||    
T  17465329 cattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacatt 17465406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 17587885 - 17587808
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacatt 168  Q
    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||||||||||| ||||||    
T  17587885 cattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacatt 17587808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 182
Target Start/End: Original strand, 556217 - 556345
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| |||||||| |||  |||| |||||  | |||||| ||||||||||||| |||||||||||||||||| ||  | | |||| ||||| ||||    
T  556217 taaactaactaaataataaataaaattgtcattgaggcattttatcaaacactttgtatgcaaagtatcaaacatactcaaaatatgttcatttgccacc 556316  T
Q  154 attcaaaatcacattctacttaaacatca 182  Q
    |||||||| |||||| ||||  |||||||    
T  556317 attcaaaaccacattatactctaacatca 556345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 45257490 - 45257362
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||  |||    
T  45257490 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgtt-ttttaccac 45257392  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  45257391 cattcaaaaccacattatactctaacatca 45257362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 5541110 - 5541186
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacata 129  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| ||||||| ||||||||||||||||||||||||    
T  5541110 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacaatttgtgtgcaaagtatcaaacata 5541186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 16675289 - 16675213
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacata 129  Q
    |||||||||  |||||||||||  |||| |||||  | |||||| | ||||||||||||||||||||||||||||||    
T  16675289 ctaaactaacaaaataatcaataaaattgtcattgagacattttattaaacactttgtgtgcaaagtatcaaacata 16675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 17649657 - 17649581
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacata 129  Q
    |||||||||  |||||||||||  |||| |||||  | |||||| | ||||||||||||||||||||||||||||||    
T  17649657 ctaaactaacaaaataatcaataaaattgtcattgagacattttattaaacactttgtgtgcaaagtatcaaacata 17649581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 9370960 - 9371030
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatca 123  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| ||||||||||||||||||||||||||    
T  9370960 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatca 9371030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 556390 - 556441
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||||||||  ||||||| |||||||||| |||||||||| |||||||    
T  556390 gcaatcatcaaaaattcaattcctacataaaccttaaccacatgaaaactac 556441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 5541286 - 5541336
Alignment:
Q  228 aatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||| ||||||| ||||| ||||||||||||||| |||||||||    
T  5541286 aatcatcaaaat-tcaattcctacatcaaccctaaccacatgaaaactacca 5541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 9371145 - 9371183
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  9371145 tcaattcatacattaaccctaaccacatgaaaactacca 9371183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 35610175 - 35610213
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  35610175 tcaattcatacattaaccctaaccacatgaaaactacca 35610213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 16675102 - 16675049
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||   |||||| ||||| ||||||||||||||| |||||||||    
T  16675102 gcaatcatcaaaagtccaattcctacatcaaccctaaccacatgaaaactacca 16675049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 17649470 - 17649417
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||   |||||| ||||| ||||||||||||||| |||||||||    
T  17649470 gcaatcatcaaaagtccaattcctacatcaaccctaaccacatgaaaactacca 17649417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 41734492 - 41734439
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||| | |||||||  |||| |||||||||||| ||||||||||||    
T  41734492 gcaatcatcaaattttcaattccaacatcaaccctaaccacgtgcaaactacca 41734439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 278
Target Start/End: Complemental strand, 22495456 - 22495185
Alignment:
Q  17 acatcattcccatcaactacaattatctataactatctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaa 116  Q
    ||||||||| ||||||||||||| || ||||||||  ||||||||||||||||||||||||||| |||||||| |||||| ||||| |   | |||||||    
T  22495456 acatcattctcatcaactacaataatatataactacataaactaagtaaataatcaatgcaattttcatttgggcattttatcaaaaaacatttgtgcaa 22495357  T
Q  117 agtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaac-----------atcaattacagcaattacattcattta 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||           |||||||||| ||| ||||||||||||    
T  22495356 agtatcaaacatattctcattgtgttaatttgacaccattcaaaaccacattctacttaaacatcatctaaacatcaattacatcaactacattcattta 22495257  T
Q  206 ccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacc 278  Q
     | |||| ||||||||||| |||| |||||||||||||||||||||  ||| ||||| || ||||||||||||    
T  22495256 tcaattcgtaaactacacatgcaaccatcaaaatgtcaattcatac-gaaaacctaatcatatgcaaactacc 22495185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 24249985 - 24249761
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||| | ||||||||||||  |||||||||| || |||||| ||||| ||||| |||||||||||||||||||||||  | |||| | |||||||||    
T  24249985 ctaaactgactaaataatcaatataattctcattggggcattttatcaaatactttatgtgcaaagtatcaaacatattcaaaatgtgctcatttgacac 24249886  T
Q  153 cattcaaaatcacattctacttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcataca 252  Q
    ||||||||| |||||| ||||||||||||||||||| ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||| || |    
T  24249885 cattcaaaaccacattatacttaaacatcaattacaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattcctata 24249786  T
Q  253 taaaccctaaccacatgcaaactac 277  Q
    | |||||||||||||||||||||||    
T  24249785 tcaaccctaaccacatgcaaactac 24249761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 39602218 - 39601993
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  39602218 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 39602119  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  39602118 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 39602019  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  39602018 atcaaccctaaccacatacaaactac 39601993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 53 - 271
Target Start/End: Original strand, 5303791 - 5304010
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  5303791 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 5303890  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||   ||| ||| |||||||||||| | |||||||||||||||| |||||||| ||| ||||||||   |     
T  5303891 cattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaattcataaactacacatgcaatcatgaaattgtcaattttaaa 5303990  T
Q  252 ataaaccctaaccacatgca 271  Q
    || |||||||||||||||||    
T  5303991 atcaaccctaaccacatgca 5304010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 53 - 274
Target Start/End: Original strand, 15036298 - 15036520
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  15036298 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 15036397  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| | ||||||||| |||||||||||| ||||||||   |     
T  15036398 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctgaactacacatgcaatcatcaaattgtcaattttgaa 15036497  T
Q  252 ataaaccctaaccacatgcaaac 274  Q
    || |||||||||||||| |||||    
T  15036498 atcaaccctaaccacatacaaac 15036520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 39846556 - 39846781
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| ||||   | || ||| ||||||||||||||| |||||||| ||||||||||  |||||||| ||||| |||    
T  39846556 ctaaactaactaaataatcaataaaattgtcatggagacagtttatcaaacactttgtgtacaaagtataaaacatattcaaattgtgttcatttgccac 39846655  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  39846656 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 39846755  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  39846756 atcaaccctaaccacatgcaaactac 39846781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 42485108 - 42485333
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| || ||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  42485108 ctaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 42485207  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||  |||||||||||| | || ||||||||||||| ||||| || ||| |||||||||||      
T  42485208 cattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattt 42485307  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    ||||| ||||||||||||||||||||    
T  42485308 ataaaacctaaccacatgcaaactac 42485333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 39252514 - 39252320
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  ||||| || ||||| |||    
T  39252514 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtattcatttgccac 39252415  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaatt 246  Q
    ||||||||  |||||| | | ||||||| ||  | || ||| ||||||||||||   |||| ||||||||||| |||||||||||| ||||||||    
T  39252414 cattcaaagccacattatgatttaaacaacatatgcaacaactacattcatttattaattcctaaactacacatgcaatcatcaaattgtcaatt 39252320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 40076820 - 40077045
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||| ||| ||||||||||  |||||||| ||||| |||    
T  40076820 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaattataaaacatattcaaattgtgttcatttgccac 40076919  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||  |||||||||||| | ||||||||||||||||   |||||||||| ||||||||   |     
T  40076920 cattcaaagccacattatgatttaaacaacataggcaacagctacattcatttatcaattcataaactacacatataatcatcaaattgtcaattttaaa 40077019  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  40077020 atcaaccctaaccacatgcaaactac 40077045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 43212008 - 43211783
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||  |||    
T  43212008 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttcccac 43211909  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| ||||||||| || ||||||||   |     
T  43211908 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcgaattgtcaattttaaa 43211809  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||| ||||| ||||||||    
T  43211808 atcaaccctaagcacatacaaactac 43211783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 277
Target Start/End: Complemental strand, 43188551 - 43188327
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| ||||||||||||  |||| |||||    |||||| ||||||||||||| |||||||||| ||||||||||  || ||||| ||||| ||||    
T  43188551 taaactaactaaataatcaataaaattgtcattgaaacattttatcaaacactttgtatgcaaagtataaaacatattcaaatcgtgttcatttgccacc 43188452  T
Q  154 attcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcataca 252  Q
    |||||||  |||||| | | ||||||| ||   ||| ||| ||||||||||||   |||| ||||||||||| |||||||||||| ||||||||   | |    
T  43188451 attcaaagccacattatgatttaaacaacatagacaacaactacattcatttattaattcctaaactacacatgcaatcatcaaattgtcaattttaaaa 43188352  T
Q  253 taaaccctaaccacatgcaaactac 277  Q
    | |||| ||||||||||||||||||    
T  43188351 tcaaccataaccacatgcaaactac 43188327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 37327286 - 37327171
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  37327286 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 37327187  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||||||||||    
T  37327186 cattcaaaatcacatt 37327171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 2984625 - 2984400
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| || ||  | |||||| |||||||||||||||||||||||| |||| |||||  |||||||| ||||| ||     
T  2984625 ctaaactaactaaataatcaatataattgtcgttgaggcattttatcaaacactttgtgtgcaaagtatgaaacttattcaaattgtgtttatttggcat 2984526  T
Q  153 cattcaaaatcacattctacttaaacatcaattacag--caattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcata 250  Q
    ||||||||| |||||| |||||||| |||| | | ||  ||||||||||||| ||     || | ||| ||||| |||||||||||| ||||||||   |    
T  2984525 cattcaaaaccacattatacttaaaaatcattcaaagatcaattacattcatctataacatc-ttaacaacacatgcaatcatcaaattgtcaattttaa 2984427  T
Q  251 cataaaccctaaccacatgcaaactac 277  Q
     || |||||||||||||||||||||||    
T  2984426 aatcaaccctaaccacatgcaaactac 2984400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 489199 - 489424
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| || ||||||||||||||||||||| |||||||||   |||||||| |||||  ||    
T  489199 ctaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatatttaaattgtgttcatttgcaac 489298  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||  |||||||||||| | || ||||||||||||| ||||| || ||| |||||||||||      
T  489299 cattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattt 489398  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
     |||| ||||||||||||||||||||    
T  489399 gtaaaacctaaccacatgcaaactac 489424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 34822587 - 34822812
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||| ||||| |||||||||   |||||||| |||||        
T  34822587 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcagagtataaaacatatttaaattgtgttcatttgcagt 34822686  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | |||| || ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  34822687 cattcaaagccacattatgatttaaccaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 34822786  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  34822787 atcaaccctaaccacatgcaaactac 34822812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 35552168 - 35552039
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  35552168 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 35552069  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  35552068 cattcaaaaccacattatactctaacatca 35552039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 45128252 - 45128123
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| | |||||||||| |||||| |||| || |||||| |||||||||||||||||||||||||||||||| ||  |  |||||  |||| |||    
T  45128252 ctaaactaactcaataatcaatacaattcacattggggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaacgtgttcttttgccac 45128153  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  45128152 cattcaaaaccacattatactctaacatca 45128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 39938786 - 39939011
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| || |||||||||  |||| |||||  | |||||| ||||| |||||||||||||||||| |||| |||||  |||||||| ||||| |||    
T  39938786 ctaaactaactacataatcaataaaattgtcattgagacattttatcaaatactttgtgtgcaaagtataaaacttattcaaattgtgttcatttgccac 39938885  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  | |||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||| ||| | |||||||||| | ||||||   |     
T  39938886 cattcaaagccccattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactatacatgtaatcatcaaattatcaattttaaa 39938985  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || ||||||||||||||| |||||||    
T  39938986 atcaaccctaaccacatgtaaactac 39939011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 277
Target Start/End: Original strand, 41249700 - 41249868
Alignment:
Q  110 tgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccg 208  Q
    |||||||||||| || |||||||  |||||||| ||||| |||||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| |     
T  41249700 tgtgcaaagtataaagcatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatca 41249799  T
Q  209 attcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||| ||||||||||| |||||||||||| ||||||||   | ||  ||||||||||||||||||||||    
T  41249800 attcctaaactacacatgcaatcatcaaattgtcaattttaaaatctaccctaaccacatgcaaactac 41249868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 25097 - 25212
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  25097 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 25196  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  25197 caatcaaaaccacatt 25212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 1053027 - 1052912
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  1053027 ctaaactaactaaataatcaataaaattgtcattgatacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 1052928  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  1052927 caatcaaaaccacatt 1052912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 23021891 - 23022006
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  23021891 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 23021990  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  23021991 caatcaaaaccacatt 23022006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 26659949 - 26659834
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  26659949 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 26659850  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  26659849 caatcaaaaccacatt 26659834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 20857788 - 20857659
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| ||||||| |||||||||||||||||||||||| ||  | ||||||  ||||  ||    
T  20857788 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacaatttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcaac 20857689  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  20857688 cattcaaaaccacattatactctaacatca 20857659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 37327165 - 37327082
Alignment:
Q  193 ttacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||||||||||||| | |||||||||||||||| |||||||||||| ||||||||   | || |||||||| ||||||||||||||    
T  37327165 ttacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaa-cacatgcaaactac 37327082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 25864652 - 25864734
Alignment:
Q  194 tacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||||||| | |||||||| ||||||| |||||||||||| ||||||||   | || |||||||||||||||||||||||    
T  25864652 tacattcatttatcaattcataa-ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactac 25864734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 5677399 - 5677346
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||    
T  5677399 gcaatcatcaaaatttcaattcctacatcaaccctaaccacatgcagactacca 5677346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 34371464 - 34371540
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacata 129  Q
    ||||||||| |||||||||||   |||| |||||    |||||| ||||||||||||||||||||||||||||||||    
T  34371464 ctaaactaactaaataatcaaaaaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacata 34371540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 45128078 - 45128027
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||||||||| ||||||| ||||| |||| ||||||||||||||||||    
T  45128078 gcaatcatcaaaatttcaattcctacatcaaccataaccacatgcaaactac 45128027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 45064734 - 45064670
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaa 117  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| ||||||||||||||||||||    
T  45064734 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaa 45064670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 45064582 - 45064519
Alignment:
Q  214 taaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||||||||||| |||||||||||| ||||||||   | || |||||||||||||| ||||||||    
T  45064582 taaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactac 45064519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 25286 - 25324
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  25286 tcaattcatacattaaccctaaccacatgaaaactacca 25324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 22510854 - 22510816
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  22510854 tcaattcatacattaaccctaaccacatgaaaactacca 22510816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 26659760 - 26659722
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  26659760 tcaattcatacattaaccctaaccacatgaaaactacca 26659722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 20857614 - 20857561
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| |||| |||||||||| |||||||||    
T  20857614 gcaatcatcaaaaattcaattcctacatcaaccttaaccacatgaaaactacca 20857561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 23022065 - 23022118
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||| |||| |||| |||||||| ||||| ||||||||||||||| |||||||||    
T  23022065 gcactcataaaaaagtcaattcctacatcaaccctaaccacatgaaaactacca 23022118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 273
Target Start/End: Original strand, 17514230 - 17514497
Alignment:
Q  17 acatcattcccatcaactacaattatctataactatctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaa 116  Q
    |||||||| |||||||||||||||||| |||||||  |||| ||| ||||||||||||  |||| | |||||| |||||| |||||||||||||||||||    
T  17514230 acatcatttccatcaactacaattatccataactacataaattaactaaataatcaatataatttttatttgggcattttatcaaacactttgtgtgcaa 17514329  T
Q  117 agtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctac-----------ttaaacatcaattacagcaattacattcattta 205  Q
    || |||||||||||||  |||||||| ||||| |||||||||||| |||||| |||           |||||||||||||||| ||| || |||||||||    
T  17514330 agaatcaaacatattcaaattgtgttcatttggcaccattcaaaaccacattatacttatacatcatttaaacatcaattacaacaactatattcattta 17514429  T
Q  206 ccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaa 273  Q
     | |||||||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||||||    
T  17514430 tcaattcataaactacacacgtaatcttcaaaatgtcaattcatttataaaccctaaccacatgcaaa 17514497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 52802634 - 52802409
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| |||| |||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||| ||||||  ||||||||| |||| |||    
T  52802634 ctaaactaactaaacaatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaagatattcaaattgtgttattttgccac 52802535  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    |||||||||||||||| | ||||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  52802534 cattcaaaatcacattatgacttaaacaacataagcaacaactacattcatttatcaattcttaaactacacatgcaatcatcaaattgtcaattttaaa 52802435  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  52802434 atcaaccctaaccacatgcaaactac 52802409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 277
Target Start/End: Original strand, 23275674 - 23275899
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||| | ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| ||||    
T  23275674 taaactgactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgtcacc 23275773  T
Q  154 -attcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
     ||||||| ||||||| | | ||||||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| |||||||| | |     
T  23275774 cattcaaagtcacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaatttaaaa 23275873  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  23275874 atcaaccctaaccacatgcaaactac 23275899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 35258443 - 35258668
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  35258443 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 35258542  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| || ||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  35258543 cattcaaagccacattatgatttaaacaacataggcaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 35258642  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  35258643 atcaaccctaaccacatgcaaactac 35258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 51321217 - 51320992
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||| ||| ||||||||||  |||||||| ||||| |||    
T  51321217 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaaatataaaacatattcaaattgtgttcatttgccac 51321118  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
     ||||||| ||||||| | | |||||||  |    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  51321117 tattcaaagtcacattatgatttaaacaatataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 51321018  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  51321017 atcaaccctaaccacatgcaaactac 51320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 19925245 - 19925020
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| || ||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  19925245 ctaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 19925146  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||  |||||||||||| | || ||||||||||||| ||||| || ||| |||||||||||      
T  19925145 cattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattt 19925046  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    ||||| ||||||||||||||||||||    
T  19925045 ataaaacctaaccacatgcaaactac 19925020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 30890564 - 30890339
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| || ||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  30890564 ctaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 30890465  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||  |||||||||||| | || ||||||||||||| ||||| || ||| |||||||||||      
T  30890464 cattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattt 30890365  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    ||||| ||||||||||||||||||||    
T  30890364 ataaaacctaaccacatgcaaactac 30890339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 277
Target Start/End: Original strand, 31783296 - 31783523
Alignment:
Q  51 atctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgac 150  Q
    ||||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |    
T  31783296 atctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 31783395  T
Q  151 accattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcat 249  Q
    ||||||||||  |||||| | | ||||| | ||    || ||| |||||| ||||| | |||| |||||||||||  ||||||||||| ||||||||       
T  31783396 accattcaaagccacattatgatttaaagaacataggcaacaactacatttatttatcaattcctaaactacacatacaatcatcaaattgtcaatttta 31783495  T
Q  250 acataaaccctaaccacatgcaaactac 277  Q
    | || |||||||||||||| ||||||||    
T  31783496 aaatcaaccctaaccacatacaaactac 31783523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 45825380 - 45825154
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaa-gtatcaaacatattctcattgtgttaatttgaca 151  Q
    ||||| ||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||| |||| ||||||||||  |||||||| ||||| ||    
T  45825380 ctaaattaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaaagtataaaacatattcaaattgtgttcatttgcca 45825281  T
Q  152 ccattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcata 250  Q
    |||||||||  |||||| | | || |||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |    
T  45825280 ccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaa 45825181  T
Q  251 cataaaccctaaccacatgcaaactac 277  Q
     || |||||||||||||||||||||||    
T  45825180 aatcaaccctaaccacatgcaaactac 45825154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 277
Target Start/End: Complemental strand, 47502813 - 47502593
Alignment:
Q  58 ctaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattc 157  Q
    |||| ||||||||||||  |||| |||||  | ||||||  ||||||||||||||||||||||| ||||||||||  |||||||| ||||| ||||||||    
T  47502813 ctaactaaataatcaataaaattgtcattgaggcattttaccaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 47502714  T
Q  158 aaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaa 256  Q
    |||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| |||| |||||| |||||||||||| ||||||||   | || ||    
T  47502713 aaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaattacacatgcaatcatcaaattgtcaattttaaaatcaa 47502614  T
Q  257 ccctaaccacatgcaaactac 277  Q
    | |||||||||||||||||||    
T  47502613 ctctaaccacatgcaaactac 47502593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 277
Target Start/End: Original strand, 49857558 - 49857738
Alignment:
Q  98 tcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacagcaattac 196  Q
    |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||||||||||  |||||||| | ||||||| ||    || ||| |||    
T  49857558 tcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattctcatttaaacaacataggcaacaactac 49857657  T
Q  197 attcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||||||||| | |  ||||||||||||| ||||| || ||| | |||||||||  ||||| ||||||||||||||||||||    
T  49857658 attcatttatcaaaacataaactacacatgcaatgataaaattatcaattcatttataaaacctaaccacatgcaaactac 49857738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 277
Target Start/End: Original strand, 19527151 - 19527338
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacag 189  Q
    |||||| ||||||||||||||||||||  || ||||||||||  |||||||  ||||| |||||||||||  |||||| | | ||||||| ||    ||     
T  19527151 cattttatcaaacactttgtgtgcaaaacataaaacatattcaaattgtgtccatttgccaccattcaaagccacattatgatttaaacaacataggcaa 19527250  T
Q  190 caattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||| |||||||||||| | ||||||||| |||||| |||||||||||| ||||||||   | || |||| ||||||||||||||||||    
T  19527251 caactacattcatttatcaattcataaaatacacatgcaatcatcaaattgtcaattttaaaatcaaccataaccacatgcaaactac 19527338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 47656371 - 47656244
Alignment:
Q  55 aaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacca 154  Q
    ||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||||    
T  47656371 aaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccacca 47656272  T
Q  155 ttcaaaatcacattctacttaaacatca 182  Q
    |||||||||||||| ||||  |||||||    
T  47656271 ttcaaaatcacattatactctaacatca 47656244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 279
Target Start/End: Complemental strand, 25147780 - 25147569
Alignment:
Q  78 attctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaa 177  Q
    |||||||||| |  |||||  ||||||||||| ||||||||||| |||| ||||  ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  25147780 attctcatttaggtattttaacaaacactttgagtgcaaagtatgaaacttattggcattgtgttaattggacaccattcaaaattacattgtacttaaa 25147681  T
Q  178 catcaatt-----------acagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccac 266  Q
    ||||| ||           ||| ||| ||||||||| ||     |||||||||||||| |||||||||||| | ||||||| ||||| ||| |||||||     
T  25147680 catcatttaaacaacattcacatcaactacattcatctataacatcataaactacacatgcaatcatcaaagt-tcaattcctacatcaacactaaccag 25147582  T
Q  267 atgcaaactacca 279  Q
    |||||||||||||    
T  25147581 atgcaaactacca 25147569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 23935576 - 23935664
Alignment:
Q  94 tttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaacatca 182  Q
    |||| ||||||||||| ||||||||||| |||| ||||  |||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  23935576 tttgacaaacactttgagtgcaaagtatgaaacttattaccattgtgttaatttgacaccattcaaaaccacattgtacttaaaaatca 23935664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 21141530 - 21141401
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | |||| |  |||| |||    
T  21141530 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgatcttttgccac 21141431  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  21141430 cattcaaaaccacattatactctaacatca 21141401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 50343539 - 50343668
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  50343539 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 50343638  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| || ||| ||||  |||||||    
T  50343639 cattcaaaaccatattatactctaacatca 50343668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 2365739 - 2365624
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  2365739 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 2365640  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  2365639 cattcaaaaccacatt 2365624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 3731951 - 3732066
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  3731951 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 3732050  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  3732051 caatcaaaaccacatt 3732066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 11196241 - 11196158
Alignment:
Q  194 tacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||| ||||| | |||||||||||||||| |||||||||||||||||||||   | || |||||||||||||||||||||||    
T  11196241 tacattaatttatcaattcataaactacacatgcaatcatcaaaatgtcaattttaaaatcaaccctaaccacatgcaaactac 11196158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 13639593 - 13639708
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  13639593 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 13639692  T
Q  153 cattcaaaatcacatt 168  Q
     |||||||| ||||||    
T  13639693 aattcaaaaccacatt 13639708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 19156518 - 19156403
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  19156518 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 19156419  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  19156418 cattcaaaaccacatt 19156403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 26876160 - 26876045
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  26876160 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 26876061  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  26876060 caatcaaaaccacatt 26876045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 22524638 - 22524509
Alignment:
Q  51 atctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgac 150  Q
    ||||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||  ||||  ||| |||| ||||| |    
T  22524638 atctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaac--attcaaattatgtttatttggc 22524541  T
Q  151 accattcaaaatcacattctacttaaacatca 182  Q
     |||||| ||| |||||| |||||||| ||||    
T  22524540 tccattccaaaccacattatacttaaaaatca 22524509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 2424938 - 2425065
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| | |||  | |||||| |||||||||||||||||||||||| ||||  ||||  |||||||| ||||| | |    
T  2424938 ctaaactaaataaataatcaataaaattgttattgaggcattttatcaaacactttgtgtgcaaagtataaaac--attcaaattgtgtttatttggctc 2425035  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||| ||| |||||| |||||||| ||||    
T  2425036 cattccaaaccacattatacttaaaaatca 2425065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 97518 - 97647
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||| ||||  |||| |||||  | |||||| ||||||||||||||| |||||||||||||||| ||  | |||| |  |||| |||    
T  97518 ctaaactaactaaataaacaataaaattatcattgaggcattttctcaaacactttgtgtacaaagtatcaaacatactcaaaatgtgatcttttgccac 97617  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  97618 cattcaaaaccacattatactctaacatca 97647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 8474250 - 8474173
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacatt 168  Q
    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| ||||| |||||| ||||||    
T  8474250 cattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccaatcaaaaccacatt 8474173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 38127052 - 38127128
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacata 129  Q
    ||||||||| ||| ||||||||  |||| |||||  | |||||| ||||||||||||||||||||||||||||||||    
T  38127052 ctaaactaactaagtaatcaataaaattttcattgagacattttatcaaacactttgtgtgcaaagtatcaaacata 38127128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 25167050 - 25166954
Alignment:
Q  55 aaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgaca 151  Q
    |||||||  ||| |||||||| ||| ||||||| |  ||||| |||||||||||| ||||||||||| |||||||  |||||||| |||||| ||||    
T  25167050 aaactaacaaaaaaatcaatgtaatcctcatttaggaattttatcaaacactttgagtgcaaagtatgaaacatagactcattgtattaattggaca 25166954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 11183542 - 11183459
Alignment:
Q  194 tacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||| ||||| | |||||||||||||||| | |||||||||| ||||||||   | || ||| |||||||||||||||||||    
T  11183542 tacattaatttatcaattcataaactacacatgtaatcatcaaattgtcaattttaaaatcaactctaaccacatgcaaactac 11183459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 21141356 - 21141303
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||| |||||||||    
T  21141356 gcaatcatcaaaaattcaattcctacatcaaccctaaccacatgaaaactacca 21141303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 50343713 - 50343766
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||| |||||||||    
T  50343713 gcaatcatcaaaaattcaattcctacatcaaccctaaccacatgaaaactacca 50343766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 3732140 - 3732178
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  3732140 tcaattcatacattaaccctaaccacatgaaaactacca 3732178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 8474099 - 8474061
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  8474099 tcaattcatacattaaccctaaccacatgaaaactacca 8474061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 97692 - 97745
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||    
T  97692 gcaatcatcaaaaattcaattcctacatcaaccctaaacacatgaaaactacca 97745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 26875982 - 26875933
Alignment:
Q  230 tcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||| |||| |||||||| ||||| ||||||||||||||| |||||||||    
T  26875982 tcataaaaaagtcaattcctacatcaaccctaaccacatgaaaactacca 26875933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 38127227 - 38127280
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||| | |||||||  |||| |||||||||||| ||||||||||||    
T  38127227 gcaatcatcaaattttcaattccaacatcaaccctaaccacgtgcaaactacca 38127280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 21601143 - 21600983
Alignment:
Q  17 acatcattcccatcaactacaattatctataactatctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaa 116  Q
    |||||||| |||| |||||||||||||||||||||  |||||||| ||||||||||||  ||||||||||||| |||||| |||||||||||||||||||    
T  21601143 acatcatttccattaactacaattatctataactacataaactaactaaataatcaatataattctcatttgggcattttatcaaacactttgtgtgcaa 21601044  T
Q  117 agtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaa 177  Q
    ||||||||||||||||  |||||||| ||||| |||||||||||| |||||| ||||||||    
T  21601043 agtatcaaacatattcaaattgtgttcatttgtcaccattcaaaaccacattatacttaaa 21600983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 6320133 - 6320358
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||| ||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  6320133 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacgctttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 6320232  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | || |||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  6320233 cattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 6320332  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  6320333 atcaaccctaaccacatgcaaactac 6320358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 24088352 - 24088577
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  ||||||||||||||| |||||||| ||||||||||  |||||||| ||||| |||    
T  24088352 ctaaactaactaaataatcaatataattttcattgagacatttgatcaaacactttgtgtacaaagtataaaacatattcaaattgtgttcatttgccac 24088451  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||   ||| ||| |||||||||||| | |||||||||||||||| ||||| |||||| ||||||||   |     
T  24088452 cattcaaagccacattatcatttaaacaacatagacaacaactacattcatttatcaattcataaactacacatgcaattatcaaattgtcaattttaaa 24088551  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || ||| |||||||||||||||||||    
T  24088552 atcaacactaaccacatgcaaactac 24088577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 275
Target Start/End: Original strand, 29821561 - 29821821
Alignment:
Q  17 acatcattcccatcaactacaattatctataactatc-taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgca 115  Q
    |||||||||| | |||||||| | ||||||||| ||| |||||||| |||||||||||| |||| | ||||| | ||||||   ||| | |||  |||||    
T  29821561 acatcattcctagcaactacagtcatctataac-atcataaactaactaaataatcaattcaat-cacatttaggcattttaagaaatagttttagtgca 29821658  T
Q  116 aagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctac-----ttaaacatcaattacagcaattacattcatttaccgat 210  Q
    || |||  ||| || | ||||||| ||||||||||||||||||||||||||||||||     ||||||||||||||||| || |||||||||||    ||    
T  29821659 aaatat--aacttaatatcattgttttaatttgacaccattcaaaatcacattctacttaatttaaacatcaattacagtaactacattcatttctaaat 29821756  T
Q  211 tcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaact 275  Q
    ||||||| ||||||  || | |||||||||||||||| || || |||||||||||||| ||||||    
T  29821757 tcataaattacacatacatttatcaaaatgtcaattcctagatcaaccctaaccacatacaaact 29821821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 30424127 - 30424228
Alignment:
Q  175 aaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaac 274  Q
    |||||||||||| |  || |||||||||||| | |||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  30424127 aaacatcaattataataactacattcatttatcaattcctaaactatacatgcaatcatcaaaatgtcaattcatacataaactctaaccacatgcacac 30424226  T
Q  275 ta 276  Q
    ||    
T  30424227 ta 30424228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 24722431 - 24722302
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  ||||||||    
T  24722431 ctaaactaactaaataatcaataaaattgtcattgacgcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgacac 24722332  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  24722331 cattcaaaaacacattatactctaacatca 24722302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 31769208 - 31768979
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  | || |||||  | |||||| |||||||||||||||||||||||| ||||||||||  ||||||||  |||| |||    
T  31769208 ctaaactaactaaataatcaataaatttgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcttttgccac 31769109  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactaca----cacgcaatcatcaaaatgtcaattc 247  Q
    ||||||||| |||||| | | ||||||| ||    || ||| |||||||||||  | |||| ||||| |||    || |||||||||||| |||| |||     
T  31769108 cattcaaaaccacattatgatttaaacaacataagcaacaactacattcatttgtcaattcctaaaccacacatgcaagcaatcatcaaattgtcgattt 31769009  T
Q  248 atacataaaccctaaccacatgcaaactac 277  Q
      | || |||||||||||||||||||||||    
T  31769008 taaaatcaaccctaaccacatgcaaactac 31768979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 6201651 - 6201536
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  6201651 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 6201552  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  6201551 caatcaaaaccacatt 6201536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 11688618 - 11688503
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  11688618 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 11688519  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  11688518 caatcaaaaccacatt 11688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 22301683 - 22301568
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  22301683 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 22301584  T
Q  153 cattcaaaatcacatt 168  Q
     |||||||| ||||||    
T  22301583 aattcaaaaccacatt 22301568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 30829222 - 30829337
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  30829222 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 30829321  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  30829322 caatcaaaaccacatt 30829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 3501672 - 3501543
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||| ||||  |||| || ||  | |||||| |||||||||||||||||||||||||||||||| ||  | |||| |  |||| |||    
T  3501672 ctaaactaactaaataaacaataaaattgtccttgaggcattttctcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgatcttttgccac 3501573  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  3501572 cattcaaaaccacattatactctaacatca 3501543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 26423499 - 26423424
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacata 129  Q
    |||||||| ||||||| ||||  |||| |||||  | |||||| ||||||||||||||||||||||||||||||||    
T  26423499 taaactaactaaataaacaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacata 26423424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 14216650 - 14216597
Alignment:
Q  133 tcattgtgttaatttgacaccattcaaaatcacattctacttaaacatcaatta 186  Q
    |||| |||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  14216650 tcatcgtgttaatttcacaccattcaaaacctcattctacttaaacatcaatta 14216597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 27617218 - 27617142
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacata 129  Q
    ||||||||| ||||||||||||  | || |||||    |||||| ||||||||||||||||||||||||||||||||    
T  27617218 ctaaactaactaaataatcaataaatttgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacata 27617142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 3381249 - 3381182
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattca 158  Q
    |||||| |||| ||||||||||||||  ||| ||||||||||  |||||||| |||||||||||||||    
T  3381249 cattttatcaaccactttgtgtgcaatatataaaacatattcaaattgtgttcatttgacaccattca 3381182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 6201462 - 6201424
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  6201462 tcaattcatacattaaccctaaccacatgaaaactacca 6201424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 11688429 - 11688391
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  11688429 tcaattcatacattaaccctaaccacatgaaaactacca 11688391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 14216561 - 14216495
Alignment:
Q  211 tcataaactacacacgcaatc-atcaaaatgtcaattcatacataaaccctaaccacatgcaaacta 276  Q
    |||||||||||||| |||||| | |||||  |||||||||  || ||||||||||||||||||||||    
T  14216561 tcataaactacacatgcaatctaccaaaagttcaattcatgtatcaaccctaaccacatgcaaacta 14216495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 30829411 - 30829449
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  30829411 tcaattcatacattaaccctaaccacatgaaaactacca 30829449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 3381116 - 3381055
Alignment:
Q  212 cataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaa 273  Q
    ||||||||||||| ||||| || ||| ||||||||||   ||||| ||||||||||||||||    
T  3381116 cataaactacacatgcaatgatgaaattgtcaattcacttataaaacctaaccacatgcaaa 3381055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 3501498 - 3501445
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||    
T  3501498 gcaatcatcaaaaattcaattcctacatcaaccctaaacacatgaaaactacca 3501445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 8701794 - 8702019
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    |||||| || ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  8701794 ctaaacaaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 8701893  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||  | || | | |||||||||||| | |||||||||||||||| |||||||||||| |||||||||||      
T  8701894 cattcaaagccacattatgatttaaacaacatatgcaactactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattcattt 8701993  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    ||||| ||||||||||||||||||||    
T  8701994 ataaaacctaaccacatgcaaactac 8702019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 38968601 - 38968375
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  38968601 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 38968502  T
Q  153 cattcaaaa-tcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcata 250  Q
    |||||| || ||||||| | | || |||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |    
T  38968501 cattcataagtcacattatgattttaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaa 38968402  T
Q  251 cataaaccctaaccacatgcaaactac 277  Q
     ||||||||||||||||||||||||||    
T  38968401 aataaaccctaaccacatgcaaactac 38968375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 7757827 - 7757602
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| |||||| |||  |||||||| ||||| |||    
T  7757827 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatgttcaaattgtgttcatttgccac 7757728  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||| |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  7757727 cattcaaaaccacattataatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 7757628  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  7757627 atcaaccctaaccacatacaaactac 7757602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 19228242 - 19228467
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  |||||||||||||||||||||||| ||||||||||  ||| |||| ||||| |||    
T  19228242 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattatgttcatttgccac 19228341  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  19228342 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 19228441  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  19228442 atcaaccctaaccacatgcaaactac 19228467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 512342 - 512567
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||| ||||  |||| |||||  |  ||||  |||||||||||| ||||||||||| ||||||||||  |||||||| ||||| |||    
T  512342 ctaaactaactaaataagcaatataattttcattgaggtatttgatcaaacactttgggtgcaaagtataaaacatattcaaattgtgttcatttgccac 512441  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||   ||| ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  512442 cattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 512541  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  512542 atcaaccctaaccacatgcaaactac 512567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 20422452 - 20422217
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| |||||||||||   |||| ||||| || |||||| |||||||||||||||| ||||||||||||||||||  | |||||| ||||| |||    
T  20422452 ctaaactaactaaataatcaaaataattgtcattggggcattttatcaaacactttgtgtgaaaagtatcaaacatattcaaaatgtgttcatttggcac 20422353  T
Q  153 cattcaaaatcacattctacttaaacatcaatta-----------cagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgt 241  Q
    |||| ||||  ||||| ||||  ||||||| |||           || ||| |||||||||||| | ||||||| ||||||||  ||||||||||| |||    
T  20422352 catttaaaactacattatactagaacatcatttaaataacatagacaacaactacattcatttatcaattcatacactacacatccaatcatcaaattgt 20422253  T
Q  242 caattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||| ||||| |||||||||||||||||||||||    
T  20422252 caattcctacatcaaccctaaccacatgcaaactac 20422217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 28241369 - 28241594
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| || ||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  28241369 ctaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 28241468  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||  |||||||||||| | || ||||||||||||| ||||| || ||| |||||||||||      
T  28241469 cattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattt 28241568  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    ||||| ||||||||||||||||||||    
T  28241569 ataaaacctaaccacatgcaaactac 28241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 277
Target Start/End: Original strand, 40624482 - 40624718
Alignment:
Q  51 atctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgac 150  Q
    ||||||||||| ||||||||||||  |||| | |||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |    
T  40624482 atctaaactaactaaataatcaataaaattgttattaaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgtc 40624581  T
Q  151 accattcaaaatcacattctacttaaacatcaatta-----------cagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaat 239  Q
    ||||||||||| |||||| |  |||||||||| |||           || ||| |||||||||||| | ||||||||| |||||| |||||||||||| |    
T  40624582 accattcaaaaccacattatcattaaacatcatttaaacagcataggcaacaactacattcatttatcaattcataaaatacacatgcaatcatcaaatt 40624681  T
Q  240 gtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||   | || |||||||| ||||||||||||||    
T  40624682 gtcaattttaaaattaaccctaa-cacatgcaaactac 40624718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 8580075 - 8580300
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  8580075 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 8580174  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||   ||||| | | ||||||| ||    || ||| |||||||| ||| | |||  ||||||||||| |||||||||||| ||||||||   |     
T  8580175 cattcaaagctacattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaactacacatgcaatcatcaaattgtcaattttgaa 8580274  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  8580275 atcaaccctaaccacatacaaactac 8580300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 42537652 - 42537427
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  || | |||||  | |||||  |||||||||||||||||||||||| ||||||||||  ||| |||| ||||| |||    
T  42537652 ctaaactaactaaataatcaatataaatttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattatgttcatttgccac 42537553  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | || |||| ||    || ||| |||||||||||| | |||||||||||||||| |||||||||||| ||||||||   |     
T  42537552 cattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaa 42537453  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || ||||||||| |||||||||||||    
T  42537452 attaaccctaacaacatgcaaactac 42537427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 277
Target Start/End: Original strand, 14260 - 14484
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| ||||    
T  14260 taaactaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccacc 14359  T
Q  154 attcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcataca 252  Q
    |||||||  |||||| | | ||||||| ||    || ||| |||||| ||||| | |||| |||||||| || |||||||||||| | ||||||   | |    
T  14360 attcaaagccacattatgatttaaacaacataggcaacaactacatttatttatcaattcctaaactacgcatgcaatcatcaaattttcaattttgaaa 14459  T
Q  253 taaaccctaaccacatgcaaactac 277  Q
    | |||||||||||||| ||||||||    
T  14460 tcaaccctaaccacatacaaactac 14484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 17658825 - 17658600
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||  ||||||||||||| |||||||||| ||||||||||  |||||||| ||||| |||    
T  17658825 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtatgcaaagtataaaacatattcaaattgtgttcatttgccac 17658726  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||| |||||| | | ||||||| ||    |  ||| |||||||||||| | ||  |||||||||||| ||||| || ||| |||||||||||      
T  17658725 cattcaaaaccacattatgatttaaacaacataggccacaactacattcatttatcaataaataaactacacatgcaatgatgaaattgtcaattcattt 17658626  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || || ||||||||||| ||||||||    
T  17658625 atcaaacctaaccacatacaaactac 17658600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 42942057 - 42942281
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| |||| |||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  ||| |||| ||||| |||    
T  42942057 ctaaactaactaaa-aatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattatgttcatttgccac 42942155  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
     |||||||  || ||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  42942156 aattcaaagccatattatgatttaaacagcataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 42942255  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  42942256 atcaaccctaaccacatgcaaactac 42942281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 5197476 - 5197347
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  5197476 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 5197377  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  5197376 cattcaaaaccacattatactctaacatca 5197347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 28877144 - 28877039
Alignment:
Q  55 aaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacca 154  Q
    ||||||| ||||||||||||  |||| |||||  | |||||| |||||||||| ||||||||||||| ||||||||||  |||||||| ||||| |||||    
T  28877144 aaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttggtgtgcaaagtataaaacatattcaaattgtgttcatttgccacca 28877045  T
Q  155 ttcaaa 160  Q
    ||||||    
T  28877044 ttcaaa 28877039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 19040687 - 19040794
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  | || |||||    |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  19040687 ctaaactaactaaataatcaataaatttgtcattgacacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 19040786  T
Q  153 cattcaaa 160  Q
    ||||||||    
T  19040787 cattcaaa 19040794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 27673224 - 27673338
Alignment:
Q  54 taaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 153  Q
    |||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||| ||||||||||| ||  | ||||||  |||| ||||    
T  27673224 taaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaaatatcaaacatactcaaaatgtgttcttttgccacc 27673323  T
Q  154 attcaaaatcacatt 168  Q
    |||||||| ||||||    
T  27673324 attcaaaaccacatt 27673338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 30705639 - 30705563
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacata 129  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||| |||||||||||    
T  30705639 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaaatatcaaacata 30705563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 5197302 - 5197249
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||| ||||  ||||||||||||| ||||||||||||||| |||||||||    
T  5197302 gcaatcataaaaaattcaattcatacatcaaccctaaccacatgaaaactacca 5197249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 6e-34; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 28469144 - 28468919
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  28469144 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 28469045  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || |||||||||||| ||| | |||  ||||||||||| |||||||||||| ||||||||   |     
T  28469044 cattcaaagccacattatgatttaaacaacataggcaacaattacattcaattatcaatttctaaactacacatgcaatcatcaaattgtcaattttaaa 28468945  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  28468944 atcaaccctaaccacatacaaactac 28468919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 78 - 276
Target Start/End: Complemental strand, 31367517 - 31367308
Alignment:
Q  78 attctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattctacttaaa 177  Q
    |||||||||| | ||||||  |||||||||| |||||||| ||| |||| || | ||||| |||| |||||||||||||||||| |||||||||||||||    
T  31367517 attctcatttaggcattttaacaaacactttttgtgcaaaatatgaaacttaatatcattatgttgatttgacaccattcaaaaccacattctacttaaa 31367418  T
Q  178 catca-----------attacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccac 266  Q
    |||||           |||||| ||| || |||||||||   |||||||||||| | | |||||||||||||| ||||||| ||||| ||||||||||||    
T  31367417 catcatttaaacatcaattacaacaaataaattcatttataaattcataaactatatatgcaatcatcaaaatatcaattcctacatcaaccctaaccac 31367318  T
Q  267 atgcaaacta 276  Q
    ||||||||||    
T  31367317 atgcaaacta 31367308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 21998693 - 21998468
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  21998693 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 21998594  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||   ||| ||| || ||||| ||| | |||  ||||||||||| |||||||||||| ||||||||   |     
T  21998593 cattcaaagccacattatgatttaaacaacatagacaacaaataaattcaattatcaattactaaactacacatgcaatcatcaaattgtcaattttaaa 21998494  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  21998493 atcaaccctaaccacatacaaactac 21998468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 39948103 - 39947878
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  ||||||||  |||| |||    
T  39948103 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcttttgccac 39948004  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| ||||||||| || ||||||||   |     
T  39948003 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcgaattgtcaattttaaa 39947904  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  39947903 atcaaccctaaccacatacaaactac 39947878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 277
Target Start/End: Complemental strand, 25965285 - 25965098
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacag 189  Q
    |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| || ||||||||  |||||| | | ||||||| ||     |     
T  25965285 cattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaacattcaaagccacattatgatttaaacaacataggaaa 25965186  T
Q  190 caattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   | || |||||||||||||||||||||||    
T  25965185 caactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactac 25965098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 45429094 - 45428869
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  45429094 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 45428995  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  |     || ||| |||||||| ||| | |||  ||||||||||| |||||||||||| ||||| ||  ||     
T  45428994 cattcaaagccacattatgatttaaactacgtaggcaacaactacattcaattatcaatttctaaactacacatgcaatcatcaaattgtcattttttaa 45428895  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  45428894 atcaaccctaaccacatacaaactac 45428869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 32955928 - 32956149
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| |||||||||||    ||| |||||  | |||||| |||||||||||| ||||||||||| ||||||||||  |||||||| ||||| |||    
T  32955928 ctaaactaactaaataatcaa----attgtcattgaggcattttatcaaacactttgcgtgcaaagtataaaacatattcaaattgtgttcatttgccac 32956023  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  32956024 cattcaaagccacattataatttaaacaacataggcaacaagtacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaa 32956123  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || ||||| |||||||| ||||||||    
T  32956124 atcaacccaaaccacatacaaactac 32956149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 35464316 - 35464398
Alignment:
Q  194 tacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaacta 276  Q
    ||||||||||||   |||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  35464316 tacattcatttataaattcataaactacacatgcaatcatcagaatgtcaattcatacataaatcctaaccacatgcaaacta 35464398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 17421070 - 17420845
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| ||||||||||  |||||||||||| ||||||||||  |||||||| ||||| |||    
T  17421070 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgttcatttgccac 17420971  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||| | | | |||  ||||||||||| |||||||||||| | ||||||   |     
T  17420970 cattcaaacccacattatgatttaaacaacataggcaacaactacattcaatgatcaatttctaaactacacatgcaatcatcaaattctcaattttgaa 17420871  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||||||||||||    
T  17420870 atcaaccctaaccacatgcaaactac 17420845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 277
Target Start/End: Complemental strand, 7185481 - 7185307
Alignment:
Q  104 actttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaatcacattct-acttaaacatcaattacagcaattacattcat 202  Q
    |||||||||||||||||| ||||||||||  |||||||| ||||| |||||||||||  |||||| | | ||||||| ||    || ||| |||||||||    
T  7185481 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcat 7185382  T
Q  203 ttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||| | |||| ||||| ||||| |||||||||||| ||||||||   | || |||||||||||||| ||||||||    
T  7185381 ttatcaattcctaaacaacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactac 7185307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 29401174 - 29401303
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  29401174 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 29401273  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  29401274 cattcaaaaccacattatactctaacatca 29401303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 45284677 - 45284546
Alignment:
Q  51 atctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgac 150  Q
    ||||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| |   | ||||||  |||| |    
T  45284677 atctaaactaactaaataatcaataaaattgtcattgagccattttatcaaacactttgtgtgcaaagtatcaaacatacttaaaatgtgttcttttgcc 45284578  T
Q  151 accattcaaaatcacattctacttaaacatca 182  Q
    ||||||||||| |||||| ||||  |||||||    
T  45284577 accattcaaaaccacattatactctaacatca 45284546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 45292040 - 45291909
Alignment:
Q  51 atctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgac 150  Q
    ||||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||||||||||| |   | ||||||  |||| |    
T  45292040 atctaaactaactaaataatcaataaaattgtcattgagccattttatcaaacactttgtgtgcaaagtatcaaacatacttaaaatgtgttcttttgcc 45291941  T
Q  151 accattcaaaatcacattctacttaaacatca 182  Q
    ||||||||||| |||||| ||||  |||||||    
T  45291940 accattcaaaaccacattatactctaacatca 45291909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 20938399 - 20938270
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  20938399 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 20938300  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    ||||||||| |||||| ||||  |||||||    
T  20938299 cattcaaaaccacattatactctaacatca 20938270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 3940299 - 3940414
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  3940299 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 3940398  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  3940399 caatcaaaaccacatt 3940414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 5352468 - 5352353
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  5352468 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 5352369  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  5352368 caatcaaaaccacatt 5352353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 15831631 - 15831516
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| ||||| |||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  15831631 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaagactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 15831532  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  15831531 cattcaaaaccacatt 15831516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 30496517 - 30496632
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  30496517 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 30496616  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  30496617 caatcaaaaccacatt 30496632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 43979023 - 43978908
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| |||||||||||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  43979023 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 43978924  T
Q  153 cattcaaaatcacatt 168  Q
    || |||||| ||||||    
T  43978923 caatcaaaaccacatt 43978908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 25515380 - 25515604
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| | ||||||||||  ||||||||||  | |||||| |||||||||||||||||||||||||||||||| ||  || ||| |  |||| |||    
T  25515380 ctaaactaactcaataatcaatataattctcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaatcgtgctc-tttgccac 25515478  T
Q  153 cattcaaaatcacattctactt-----------aaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgt 241  Q
    ||||||||| |||||| ||||            ||||||||| || ||||| |||||||| |||        |||||||||   |||||||||||||| |    
T  25515479 cattcaaaaccacattatactctaacatcattcaaacatcaactaaagcaactacattcaatta--------taaactacat--gcaatcatcaaaattt 25515568  T
Q  242 caattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||| ||||| |||||||||||||||||||||||    
T  25515569 caattcctacatcaaccctaaccacatgcaaactac 25515604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 36655920 - 36656049
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||  |||||  | |||||| |||||||||||||||||||||||||||||||| ||  | ||||||  |||| |||    
T  36655920 ctaaactaactaaataatcaataaaatgttcattgagacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 36656019  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
    |||| |||| |||||| ||||  |||||||    
T  36656020 cattgaaaaccacattatactctaacatca 36656049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 10828595 - 10828724
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| ||||||||||||||| |||||||||||||||| ||  | || |||  |||| |||    
T  10828595 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtccaaagtatcaaacatactcaaaatgcgttcttttgccac 10828694  T
Q  153 cattcaaaatcacattctacttaaacatca 182  Q
     |||||||| |||||| ||||  |||||||    
T  10828695 aattcaaaaccacattatactctaacatca 10828724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 45137144 - 45137227
Alignment:
Q  194 tacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   | || |||| ||||||||||||||||||    
T  45137144 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaactac 45137227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 43539308 - 43539416
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||    |||||| ||||| || ||||||||||||||||||||||| ||  | ||||||| |||| |||    
T  43539308 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaaaacattgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 43539407  T
Q  153 cattcaaaa 161  Q
    || ||||||    
T  43539408 caatcaaaa 43539416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 3940473 - 3940526
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||| |||||||||  ||||||||||||| ||||||||||||||| |||||||||    
T  3940473 gcactcatcaaaaattcaattcatacattaaccctaaccacatgaaaactacca 3940526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 43978845 - 43978796
Alignment:
Q  230 tcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||  ||||||||||||| ||||||||||||||| |||||||||    
T  43978845 tcatcaaaaattcaattcatacattaaccctaaccacatgaaaactacca 43978796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 45284501 - 45284448
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||| |||||||||    
T  45284501 gcaatcatcaaaaattcaattcctacatcaaccctaaccacatgaaaactacca 45284448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 45291864 - 45291811
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||  ||||||| ||||| ||||||||||||||| |||||||||    
T  45291864 gcaatcatcaaaaattcaattcctacatcaaccctaaccacatgaaaactacca 45291811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 5352279 - 5352241
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  5352279 tcaattcatacattaaccctaaccacatgaaaactacca 5352241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 30496706 - 30496744
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  30496706 tcaattcatacattaaccctaaccacatgaaaactacca 30496744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 43539497 - 43539535
Alignment:
Q  241 tcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  43539497 tcaattcatacattaaccctaaccacatgaaaactacca 43539535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 36656094 - 36656146
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacc 278  Q
    ||||||||||||   ||||||| ||||| ||||||||||||||| ||||||||    
T  36656094 gcaatcatcaaatattcaattcctacatcaaccctaaccacatgaaaactacc 36656146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 45136900 - 45136940
Alignment:
Q  91 cattttgtcaaacactttgtgtgcaaagtatcaaacatatt 131  Q
    |||||| |||||||||||||||||||||||| ||| |||||    
T  45136900 cattttatcaaacactttgtgtgcaaagtataaaatatatt 45136940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 15193 - 15418
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  15193 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 15292  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    ||  || |||||||||||| | |||  ||||||||||| |||||||||||| ||||||||   |     
T  15293 cattcaaagccacattatgatttaaacaacataggcaataactacattcatttatcaatttctaaactacacatgcaatcatcaaattgtcaattttaaa 15392  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  15393 atcaaccctaaccacatacaaactac 15418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 277
Target Start/End: Complemental strand, 7921 - 7696
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| |||| |||||||  |||| |||||  | |||||| ||||| |||||||||||||||||| ||||||||||  |||||||| ||||| ||     
T  7921 ctaaactaactaaaaaatcaataaaattgtcattgaggcattttatcaaatactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccat 7822  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||| ||    || ||| |||||||||||| | |||| ||||||||||| |||||||||||| ||||||||   |     
T  7821 cattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaa 7722  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  7721 atcaaccctaaccacatacaaactac 7696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 277
Target Start/End: Original strand, 298 - 523
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| |||||||| |||  |||| |||||  | |||||| |||||||| ||||||||||||||| ||||||||||  |||||||| ||||| |||    
T  298 ctaaactaactaaataattaataaaattgtcattgagacattttatcaaacacgttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 397  T
Q  153 cattcaaaatcacattct-acttaaacatcaattacagcaattacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatac 251  Q
    ||||||||  |||||| | | ||||||  ||    || ||| |||||||| ||| | |||  ||||||||||| |||||||||||| ||||||||   |     
T  398 cattcaaagccacattatgatttaaactacataggcaacaactacattcaattatcaatttctaaactacacatgcaatcatcaaattgtcaattttgaa 497  T
Q  252 ataaaccctaaccacatgcaaactac 277  Q
    || |||||||||||||| ||||||||    
T  498 atcaaccctaaccacatacaaactac 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 18503 - 18618
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||| ||||||||||||||||||| ||  | ||||||  |||| |||    
T  18503 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgcgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 18602  T
Q  153 cattcaaaatcacatt 168  Q
    ||||||||| ||||||    
T  18603 cattcaaaaccacatt 18618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 18677 - 18728
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    ||||| |||||||| ||||||| ||||| ||||||||||||||| |||||||    
T  18677 gcaataatcaaaatttcaattcctacatcaaccctaaccacatgaaaactac 18728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 8564 - 8481
Alignment:
Q  194 tacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||||||| | |||||||||||| ||| |||||||||||| ||||||||   | || |||||||||||||||||||||||    
T  8564 tacattcatttatcaattcataaactatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactac 8481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 10857 - 10762
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttg 148  Q
    ||||||||| ||||||||||||  |||| |||||  | |||||| |||||||||||||||| ||||||| ||||||||||  |||||||| |||||    
T  10857 ctaaactaactaaataatcaatataattgtcattgagacattttttcaaacactttgtgtgtaaagtataaaacatattcaaattgtgttcatttg 10762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 40747 - 40830
Alignment:
Q  194 tacattcatttaccgattcataaactacacacgcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactac 277  Q
    |||||||||||| | || ||||||||||||| ||||| || ||| |||||||||||  ||||| ||||||||||||||||||||    
T  40747 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactac 40830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 4224 - 4339
Alignment:
Q  53 ctaaactaagtaaataatcaatgcaattctcatttggtcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacac 152  Q
    ||||||||| | ||||||||||  |||||||||| || || ||| ||||||||||||||||||||  |||||||||| ||  | ||||||  |||| |||    
T  4224 ctaaactaactcaataatcaatataattctcattggggcactttatcaaacactttgtgtgcaaaacatcaaacatactcaaaatgtgttcttttgccac 4323  T
Q  153 cattcaaaatcacatt 168  Q
    |||| |||| ||||||    
T  4324 cattaaaaaccacatt 4339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 4398 - 4451
Alignment:
Q  226 gcaatcatcaaaatgtcaattcatacataaaccctaaccacatgcaaactacca 279  Q
    |||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||    
T  4398 gcaatcatcaaaatttcaattcctacatcaacccttaccacatgcaaactacca 4451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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