View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11116_low_7 (Length: 299)
Name: NF11116_low_7
Description: NF11116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11116_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 22 - 280
Target Start/End: Original strand, 22612026 - 22612286
Alignment:
| Q |
22 |
gattatccttctccataaactatgcaaccaacccacgtagaaatctctacactatacctaccactatattgcaaatagagaaggaaggaacacgttgata |
121 |
Q |
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| T |
22612026 |
gattatcattctccataaactatgcaaccaacccacgtagaaatctctacactatacctaccactatattgcaaatagagaaggaaggaacacgttgata |
22612125 |
T |
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| Q |
122 |
t--atatgataagaatcacacctaaatttcatactgacaattattaaataaaagatttttaaatgaatgaaaacaatatatacttgtggaggaaattgaa |
219 |
Q |
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| T |
22612126 |
tatatatgataagaatcacacctaaatttcatactgacaattattaaatagaagatttttaaatgaatgaaaacaatatatacttgtggaggaaattgaa |
22612225 |
T |
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| Q |
220 |
tttggcaatcatgaaaatgacatatttgtgagaccaataaaaagtcagagctgcaagcatg |
280 |
Q |
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| T |
22612226 |
tttggcaatcatgaaaatgacatatttgtgagaccaataaaaagtcagagctgcaagcatg |
22612286 |
T |
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