View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1111_low_169 (Length: 295)
Name: NF1111_low_169
Description: NF1111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1111_low_169 |
 |  |
|
| [»] scaffold0054 (1 HSPs) |
 |  |  |
|
| [»] scaffold1770 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 51 - 267
Target Start/End: Complemental strand, 3282658 - 3282442
Alignment:
| Q |
51 |
tattaattaatgataatatgatgcattaattttcctttaaaggtaaacaatttgaatattttttcaatttatgcgtttcatccaaacattaatgatatta |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3282658 |
tattaattaatgataatatgatgcattaattttcctttaaaggtaaacaatttgaatattttttcaatttatgcgtttcatccaaacattaatgatatta |
3282559 |
T |
 |
| Q |
151 |
tgacatattattatgcactttcccacatcaagttctctaatttttatgttgtccactttctcacgtcaagttctccaataaagataaactattaattaag |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3282558 |
tgacatattattatgcactttcccacatcaagttctctaatttttatgttgtccactttctcacgtcaagttctccaataaagataaactattaattaag |
3282459 |
T |
 |
| Q |
251 |
caacttctataattttt |
267 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3282458 |
caacttctataattttt |
3282442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 284568 - 284614
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaa |
56 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
284568 |
attattctctaaaatggacaagtattatgaaacggagggagtattaa |
284614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 24771948 - 24771903
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatta |
55 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24771948 |
attattctctaaaatggacaagtattatgaaacggagggagtatta |
24771903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 40783699 - 40783655
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
40783699 |
attattctctaaaatggacaagtattatgaaacggagggagtatt |
40783655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 23045321 - 23045279
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
23045321 |
attattctctaaaatggacaagtattatgaaacggagggagta |
23045279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 33082979 - 33083024
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatta |
55 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
33082979 |
attattctttaaaatggacaagtattatgaaacggagggagtatta |
33083024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 321863 - 321903
Alignment:
| Q |
12 |
tattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
321863 |
tattctctaaaatggacaagtattatgaaacggagggagta |
321903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 23526474 - 23526517
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
23526474 |
attattcttcaaaatggacaagtattatgaaacggagggagtat |
23526517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 47037894 - 47037852
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
|||||||| |||||| ||||| ||||||||||||||||||||| |
|
|
| T |
47037894 |
attattctttaaaatagacaagtattatgaaacggagggagta |
47037852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 41959812 - 41959853
Alignment:
| Q |
14 |
ttctctaaaatggacaattattatgaaacggagggagtatta |
55 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
41959812 |
ttctctaaaatggacatgtattttgaaacggagggagtatta |
41959853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 25614395 - 25614352
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25614395 |
attattctctaaaatggacaattattatgaaacggagggagtat |
25614352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 27814046 - 27814089
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27814046 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
27814089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 40349196 - 40349239
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
40349196 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
40349239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 36453166 - 36453122
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
36453166 |
attattctctaaaatggacaagtattatgaaacggagagagtatt |
36453122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 10981743 - 10981785
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
10981743 |
attattctctaaaatggacaaatattatgaaatggagggagta |
10981785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 47110685 - 47110729
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
|||||||||||||||| | || ||||||||||||||||||||||| |
|
|
| T |
47110685 |
attattctctaaaatgaataagtattatgaaacggagggagtatt |
47110729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 43275441 - 43275391
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaattaa |
60 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
43275441 |
attattctctaaaatggacaagtattatgaaacggagggagtattatttaa |
43275391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 11646367 - 11646323
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11646367 |
attattctctaaaatggacaagtattatgaaacggagggagtatt |
11646323 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 30999566 - 30999522
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30999566 |
attattctctaaaatggacaagtattatgaaacggagggagtatt |
30999522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 36068315 - 36068358
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
36068315 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
36068358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 7147148 - 7147190
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7147148 |
attattctctaaaatggacaagtattatgaaacggagggagta |
7147190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 40058345 - 40058303
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40058345 |
attattctctaaaatggacaagtattatgaaacggagggagta |
40058303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 40918773 - 40918731
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40918773 |
attattctctaaaatggacaagtattatgaaacggagggagta |
40918731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 3585686 - 3585735
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaatta |
59 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
3585686 |
attattctctaaaatagacaagtattatgaaacggatggagtattaatta |
3585735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 37345806 - 37345848
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
37345806 |
attattctctaaaatggacaagtattatgaaacggaaggagta |
37345848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 2539972 - 2539927
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatta |
55 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
2539972 |
attattctttaaaatggacaagtattatgaaacggaaggagtatta |
2539927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 11174265 - 11174221
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
|||||||| ||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
11174265 |
attattctttaaaatgaacaagtattatgaaacggagggagtatt |
11174221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 8626717 - 8626763
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaa |
56 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8626717 |
attattctctaaaatggacaagtattatgaaacggagggagtattaa |
8626763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 1605813 - 1605857
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1605813 |
attattctctaaaatggacaagtattatgaaacggagggagtatt |
1605857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 7761535 - 7761577
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7761535 |
attattctctaaaatggacaagtattatgaaacggagggagta |
7761577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 29260427 - 29260469
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
29260427 |
attattctctaaaatggacaagtattatgaaacggagggagta |
29260469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 15064737 - 15064693
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15064737 |
attattctccaaaatggacaagtattatgaaacggagggagtatt |
15064693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 13757442 - 13757485
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
13757442 |
attattctctaaaatggacaagtattatgaaacggatggagtat |
13757485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 17942678 - 17942721
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
17942678 |
attattctccaaaatggacaagtattatgaaacggagggagtat |
17942721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 4129661 - 4129703
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4129661 |
attattttctaaaatggacaagtattatgaaacggagggagta |
4129703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 31559780 - 31559738
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
31559780 |
attattctctaaaatggagaagtattatgaaacggagggagta |
31559738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 15064933 - 15064973
Alignment:
| Q |
14 |
ttctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
15064933 |
ttctctaaaatggacatgtattttgaaacggagggagtatt |
15064973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 23367024 - 23367069
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatta |
55 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
23367024 |
attattctctaaaatggacaagtattatgaaacggagggagtatta |
23367069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 22388180 - 22388137
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22388180 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
22388137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 39938405 - 39938451
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaa |
56 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
39938405 |
attattctctaaaatggacaagtattataaaacggagggagtattaa |
39938451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 1102736 - 1102781
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatta |
55 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
1102736 |
attattctctcaaatggacaagtattatgaaacggagggagtatta |
1102781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 3519142 - 3519191
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaatta |
59 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||||| |||| |
|
|
| T |
3519142 |
attattctctaaaatggacaagtattatgaaacggaggaagtatttatta |
3519191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 1646522 - 1646569
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaat |
57 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
1646522 |
attattctctaaaatggacaggtattatgaaacggagggagtagtaat |
1646569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 40756953 - 40756902
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaattaat |
61 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||| ||| |||| |
|
|
| T |
40756953 |
attattctccaaaatggacaagtattatgaaacggagggagtagtaagtaat |
40756902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 12969782 - 12969740
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
12969782 |
attattctccaaaatggacaagtattatgaaacggagggagta |
12969740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 37673784 - 37673743
Alignment:
| Q |
11 |
ttattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
37673784 |
ttattctctaaaatggacaagtattatgaaacggaaggagta |
37673743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 12806895 - 12806851
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12806895 |
attattctctaaaatggacaagtattatgaaacggagggagtatt |
12806851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 30720534 - 30720491
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30720534 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
30720491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 36561141 - 36561090
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaattaat |
61 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| ||| |||| |
|
|
| T |
36561141 |
attattctctaaaatggacaagtattatgaaacggagggagtactaactaat |
36561090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 40886652 - 40886610
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40886652 |
attattctctaaaatggacaagtattatgaaacggagggagta |
40886610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 25683271 - 25683229
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
25683271 |
attattctccaaaatggacaagtattatgaaacggagggagta |
25683229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 25773885 - 25773927
Alignment:
| Q |
11 |
ttattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
25773885 |
ttattctctaaaatggacaagtattatgaaacggagagagtat |
25773927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 10285100 - 10285057
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||||||||||||||| |
|
|
| T |
10285100 |
attattctttaaaatagacaagtattatgaaacggagggagtat |
10285057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 23097766 - 23097723
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| ||||||| |
|
|
| T |
23097766 |
attattctccaaaatggacaagtattatgaaacggaaggagtat |
23097723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 11319791 - 11319837
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtattaa |
56 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| | |||||||| |
|
|
| T |
11319791 |
attattctctaaaatagacaagtattatgaaacggatgaagtattaa |
11319837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 25704886 - 25704930
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
25704886 |
attattctctaaaatggacaagtattatgaaacggagggagtatt |
25704930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 44569072 - 44569116
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
44569072 |
attattctctaaaatggacaagtattatgaaacggagggagtatt |
44569116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 14261279 - 14261322
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14261279 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
14261322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 21310656 - 21310699
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21310656 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
21310699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 24706289 - 24706246
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24706289 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
24706246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 12071795 - 12071837
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12071795 |
attattctctaaaatggacaagtattatgaaacggagggagta |
12071837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 21661577 - 21661537
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggag |
50 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21661577 |
attattctctaaaatggacaagtattatgaaacggagggag |
21661537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 21670341 - 21670301
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggag |
50 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21670341 |
attattctctaaaatggacaagtattatgaaacggagggag |
21670301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 22321310 - 22321266
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
22321310 |
attattctctaaaatagacaagtattatgaaacggagggagtatt |
22321266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 40122529 - 40122487
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
40122529 |
attattctctaaaatggacaagtattatgaaacggagagagta |
40122487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 20249056 - 20249011
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatta |
55 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
20249056 |
attattctccaaaatggacaagtattatgaaacggagtgagtatta |
20249011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 21064996 - 21065037
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagt |
51 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
21064996 |
attattctctaaaatgaacaagtattatgaaacggagggagt |
21065037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 39295418 - 39295455
Alignment:
| Q |
17 |
tctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
39295418 |
tctaaaatggacaagtattatgaaacggaaggagtatt |
39295455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 50768097 - 50768129
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaac |
42 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |
|
|
| T |
50768097 |
attattctctaaaatggacaagtattatgaaac |
50768129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 19241710 - 19241667
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19241710 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
19241667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 29375367 - 29375410
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29375367 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
29375410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 36881515 - 36881558
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtat |
53 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
36881515 |
attattctctaaaatggacaagtattatgaaacggagggagtat |
36881558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 13365078 - 13365120
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
13365078 |
attattctctaaaatggacaagtattatgaaacggagggagta |
13365120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 46694152 - 46694110
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
46694152 |
attattctctaaaatggacaagtattatgaaacggagggagta |
46694110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 32835031 - 32834989
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
32835031 |
attattctctacaatggacaagtattatgaaacggagggagta |
32834989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 199090 - 199132
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
|||||| |||||||||||||| |||||||||| |||||||||| |
|
|
| T |
199090 |
attattttctaaaatggacaactattatgaaatggagggagta |
199132 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 19912177 - 19912217
Alignment:
| Q |
14 |
ttctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
19912177 |
ttctctaaaatggacatgtattttgaaacggagggagtatt |
19912217 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 38806344 - 38806384
Alignment:
| Q |
14 |
ttctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
38806344 |
ttctctaaaatggacatgtattttgaaacggagggagtatt |
38806384 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 48820575 - 48820619
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagtatt |
54 |
Q |
| |
|
|||||| | |||||||||||| |||||||||||||||| |||||| |
|
|
| T |
48820575 |
attattttttaaaatggacaagtattatgaaacggaggaagtatt |
48820619 |
T |
 |
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Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 45688 - 45730
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
45688 |
attattctctaaaatggacaagtattatgaaacggagggagta |
45730 |
T |
 |
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Target: scaffold1770 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1770
Description:
Target: scaffold1770; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 396 - 438
Alignment:
| Q |
10 |
attattctctaaaatggacaattattatgaaacggagggagta |
52 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
396 |
attattttctaaaatggacaagtattatgaaacggagggagta |
438 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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