View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1111_low_200 (Length: 274)

Name: NF1111_low_200
Description: NF1111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1111_low_200
NF1111_low_200
[»] chr8 (3 HSPs)
chr8 (1-201)||(12333504-12333704)
chr8 (110-197)||(36494146-36494233)
chr8 (38-141)||(17660534-17660637)
[»] chr2 (4 HSPs)
chr2 (2-193)||(10690190-10690381)
chr2 (2-159)||(19852148-19852305)
chr2 (14-194)||(13838427-13838606)
chr2 (88-141)||(6825116-6825169)
[»] scaffold0061 (1 HSPs)
scaffold0061 (26-208)||(60489-60671)
[»] scaffold0017 (1 HSPs)
scaffold0017 (26-208)||(137962-138144)
[»] chr4 (5 HSPs)
chr4 (29-123)||(20508333-20508427)
chr4 (23-126)||(19732347-19732450)
chr4 (29-171)||(29327135-29327276)
chr4 (31-129)||(8811943-8812041)
chr4 (43-141)||(10561669-10561767)
[»] chr3 (4 HSPs)
chr3 (104-197)||(6826571-6826664)
chr3 (56-126)||(961522-961592)
chr3 (56-141)||(27924158-27924243)
chr3 (35-87)||(16186001-16186053)
[»] chr5 (4 HSPs)
chr5 (56-126)||(33171369-33171439)
chr5 (29-123)||(12833585-12833679)
chr5 (35-123)||(27164457-27164545)
chr5 (29-123)||(12865563-12865657)
[»] scaffold0070 (1 HSPs)
scaffold0070 (145-200)||(27822-27877)
[»] scaffold0746 (1 HSPs)
scaffold0746 (145-200)||(1325-1380)
[»] chr6 (5 HSPs)
chr6 (56-126)||(13939428-13939498)
chr6 (14-126)||(34601730-34601842)
chr6 (14-126)||(34628272-34628384)
chr6 (14-126)||(34723006-34723118)
chr6 (16-56)||(20587077-20587117)
[»] chr7 (1 HSPs)
chr7 (101-141)||(12377321-12377361)


Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 12333504 - 12333704
Alignment:
Q  1 tatcacttgccgcagtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12333504 tatcacttgccgcagtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctg 12333603  T
Q  101 tcaactttaggaataagagcaataaaagttgagttaataccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12333604 tcaactttaggaataagagcaataaaagttgagttaataccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttca 12333703  T
Q  201 t 201  Q
    |    
T  12333704 t 12333704  T

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Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 36494146 - 36494233
Alignment:
Q  110 ggaataagagcaataaaagttgagttaataccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgct 197  Q
    |||||||| || |||||||||||||||||||| || |||| ||||||||||||||| |||||| |||||||| ||||||| |||||||    
T  36494146 ggaataagcgcgataaaagttgagttaatacctcgagacagcttcccatttcgatggaattctaccataaactgcataatgtcctgct 36494233  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 17660534 - 17660637
Alignment:
Q  38 aaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaa 137  Q
    |||| |||||||| |||||||||||  ||||| ||||| |||||||| |  | || |||  ||||||| |||||||| || || |||||||| |||||||    
T  17660534 aaaattttataaagactacccaccaaagaaataggacgaaaatcattaaggcgctgaggattgtcaaccttaggaatgagggctataaaagtggagttaa 17660633  T
Q  138 tacc 141  Q
    ||||    
T  17660634 tacc 17660637  T

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Target: chr2 (Bit Score: 124; Significance: 8e-64; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 2 - 193
Target Start/End: Original strand, 10690190 - 10690381
Alignment:
Q  2 atcacttgccgcagtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgt 101  Q
    |||||||||| || |||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||| ||| ||||||||    
T  10690190 atcacttgccacaatctactggcaagaaccttcgccaaaactttataaacactacccaccaacgaaatgggacgaaagtcattcaatttctgagggctgt 10690289  T
Q  102 caactttaggaataagagcaataaaagttgagttaataccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcc 193  Q
    ||| ||||| |||||||||||||||| ||| ||||||||| || ||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10690290 caattttagaaataagagcaataaaaattgtgttaatacctcgcgacaatttcccattttgatgaaattctcccataaaccgcataatatcc 10690381  T

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Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 19852305 - 19852148
Alignment:
Q  2 atcacttgccgcagtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgt 101  Q
    |||||||| |||| |||| |||| |||||||||||||||||||||||||  || ||||||| ||| || || ||  | ||||||||| ||  |||| |||    
T  19852305 atcacttggcgcaatctattagcaagaaccttcgccaaaactttataaatgcttcccaccaacgagatcggtcgatagtcattcaatttccgagggttgt 19852206  T
Q  102 caactttaggaataagagcaataaaagttgagttaataccgcgtgacaacttcccatt 159  Q
    ||| |||||||||||| ||||||||| |||| |||||||| | |||||| ||||||||    
T  19852205 caattttaggaataagcgcaataaaatttgaattaataccccttgacaatttcccatt 19852148  T

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Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 13838606 - 13838427
Alignment:
Q  14 agtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaa 113  Q
    |||||| |||| || ||||||||||||| ||||||||  || ||||| |  ||||||||||| || ||||||||| | |  ||| | |||| |||  | |    
T  13838606 agtctattagcaaggaccttcgccaaaattttataaaggctccccacgaaagaaatgggacgaaagtcattcaatttttgcgggttatcaattttcagga 13838507  T
Q  114 taagagcaataaaagttgagttaataccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcct 194  Q
    | |||||||| ||||  || || ||||| | |||||||||||||||||||||||| ||| ||||||| |||||||| ||||    
T  13838506 ttagagcaatgaaagaagaatttatacctcttgacaacttcccatttcgatgaaactctaccataaa-cgcataatgtcct 13838427  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 6825116 - 6825169
Alignment:
Q  88 tctcttagggctgtcaactttaggaataagagcaataaaagttgagttaatacc 141  Q
    ||||| |||||| |||||||| || ||||||||||||||||| | |||||||||    
T  6825116 tctctgagggctatcaacttttggtataagagcaataaaagtagtgttaatacc 6825169  T

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Target: scaffold0061 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 60489 - 60671
Alignment:
Q  26 agaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataa 125  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| || || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  60489 agaacctttgccaaaactttataaatactacccaccagcgaaatggggcgaaagtcattcaatttctgagggctgtcaattttaggaataagagcaataa 60588  T
Q  126 aagttgagttaataccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttcatctcactc 208  Q
    |||||||||||||||| | ||| || | |||||| || |||||||| ||||||||||| | ||||||||||||||| ||||||    
T  60589 aagttgagttaatacctcttgataattccccattgcggtgaaattcccccataaaccgaaaaatatcctgcttcatgtcactc 60671  T

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Target: scaffold0017 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 138144 - 137962
Alignment:
Q  26 agaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataa 125  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| || || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  138144 agaacctttgccaaaactttataaatactacccaccagcgaaatggggcgaaagtcattcaatttctgagggctgtcaattttaggaataagagcaataa 138045  T
Q  126 aagttgagttaataccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttcatctcactc 208  Q
    |||||||||||||||| | ||| || | |||||| || |||||||| ||||||||||| | ||||||||||||||| ||||||    
T  138044 aagttgagttaatacctcttgataattccccattgcggtgaaattcccccataaaccgaaaaatatcctgcttcatgtcactc 137962  T

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Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 20508427 - 20508333
Alignment:
Q  29 accttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaat 123  Q
    ||||||||||| |  ||||| | |||||||||||||||||| ||||||||||||||||| | || |||||||||||  |||||||||||||||||    
T  20508427 accttcgccaatatcttatacaaactacccaccagcgaaatcggacggaaatcattcaaccgctgagggctgtcaatcttaggaataagagcaat 20508333  T

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Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 19732450 - 19732347
Alignment:
Q  23 gctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaa 122  Q
    ||||||||||| ||||||| |||||| | ||  ||||||| ||||||||| |  |||||||||||  ||  ||| ||||| |||||||||||||||||||    
T  19732450 gctagaacctttgccaaaattttatagagacatcccaccaacgaaatgggtcaaaaatcattcaaagtccgaggactgtctactttaggaataagagcaa 19732351  T
Q  123 taaa 126  Q
    ||||    
T  19732350 taaa 19732347  T

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Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 29327276 - 29327135
Alignment:
Q  29 accttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaag 128  Q
    ||||| ||||||| ||||||||  || |||||||  |||| |||||| ||||||| |||| | |||||| |||||| ||| ||||| |||||||| ||||    
T  29327276 acctttgccaaaattttataaatgctccccaccaaggaaaagggacgaaaatcatacaattttttagggttgtcaatttttggaatgagagcaat-aaag 29327178  T
Q  129 ttgagttaataccgcgtgacaacttcccatttcgatgaaattc 171  Q
    | || |||||||| |  ||||| || ||||| |||||||||||    
T  29327177 tagaattaatacctctcgacaattttccattccgatgaaattc 29327135  T

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Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 8812041 - 8811943
Alignment:
Q  31 cttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagt 129  Q
    ||||||||||| |||||| | |||||||||||  |||||||||||||| |||||||| |  |  ||  | ||||| ||||||||||| |||||||||||    
T  8812041 cttcgccaaaattttatacatactacccaccaatgaaatgggacggaagtcattcaaacgttgtggattatcaaccttaggaataagggcaataaaagt 8811943  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 141
Target Start/End: Complemental strand, 10561767 - 10561669
Alignment:
Q  43 tttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaatacc 141  Q
    |||||| | ||| |||||||  ||||| || || ||||||||||  | || |||||||||||| |||||||| || ||||| ||||| |||||||||||    
T  10561767 tttatacaaacttcccaccaaagaaatagggcgaaaatcattcaggcgctgagggctgtcaaccttaggaatgagggcaatgaaagtagagttaatacc 10561669  T

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Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 6826571 - 6826664
Alignment:
Q  104 actttaggaataagagcaataaaagttgagttaataccgcgtgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgct 197  Q
    ||||| |||||||| || ||||||||  |||||||||| || |||| ||||||||||||||| |||||| |||||||||||||||| |||||||    
T  6826571 acttttggaataagcgcgataaaagtatagttaatacctcgagacagcttcccatttcgatggaattctaccataaaccgcataatgtcctgct 6826664  T

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Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 961592 - 961522
Alignment:
Q  56 cccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaa 126  Q
    ||||||| | ||||||| |  |||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  961592 cccaccaacaaaatgggtcaaaaatcattcaatgtctgaggactgtcaactttaggaataagagcaataaa 961522  T

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Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 27924243 - 27924158
Alignment:
Q  56 cccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaaagttgagttaatacc 141  Q
    |||||||| ||||| ||  | |||||||| ||  |||||||||| || ||||||||||| |||||||||||||||| ||| |||||    
T  27924243 cccaccagagaaataggctgaaaatcattaaacttcttagggctatctactttaggaattagagcaataaaagttgtgttgatacc 27924158  T

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Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 16186001 - 16186053
Alignment:
Q  35 gccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaa 87  Q
    ||||||| |||||||| ||||||||||| ||||||||| || |||||||||||    
T  16186001 gccaaaattttataaagactacccaccaacgaaatgggtcgaaaatcattcaa 16186053  T

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Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 33171369 - 33171439
Alignment:
Q  56 cccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaa 126  Q
    ||||||| ||||||||| || |||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  33171369 cccaccaacgaaatgggtcgaaaatcattcaatgtctgaggactgtcaactttaggaataagagcaataaa 33171439  T

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Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 12833585 - 12833679
Alignment:
Q  29 accttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaat 123  Q
    ||||||||||| |  ||||| | ||||||||||||||||||  | | |||||||| ||| | || |||||||||||| |||||||||||||||||    
T  12833585 accttcgccaatatcttatacaaactacccaccagcgaaatcagtctgaaatcatccaaccgctgagggctgtcaaccttaggaataagagcaat 12833679  T

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Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 27164545 - 27164457
Alignment:
Q  35 gccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaat 123  Q
    ||||||| |||||||| |||||||| || |||||| || || |||||||||||   |||||| || || ||||||||||||||||||||    
T  27164545 gccaaaattttataaagactacccaacaacgaaataggtcgaaaatcattcaaggacttaggactctctactttaggaataagagcaat 27164457  T

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Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 12865563 - 12865657
Alignment:
Q  29 accttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaat 123  Q
    ||||||||||| |  ||||| | |||| |||||||||||||  | | |||||||| ||| | || |||||||||||| |||||||||||||||||    
T  12865563 accttcgccaatatcttatacaaactaaccaccagcgaaatcagtctgaaatcatccaaccgctgagggctgtcaaccttaggaataagagcaat 12865657  T

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Target: scaffold0070 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 27822 - 27877
Alignment:
Q  145 tgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttca 200  Q
    ||||| ||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  27822 tgacagcttcccatttcgatggaattctacaataaaccgcataatatcctgcttca 27877  T

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Target: scaffold0746 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 1380 - 1325
Alignment:
Q  145 tgacaacttcccatttcgatgaaattctcccataaaccgcataatatcctgcttca 200  Q
    ||||||||||||||||||||| |||||| | | |||||||||||| ||||||||||    
T  1380 tgacaacttcccatttcgatggaattctacaagaaaccgcataatgtcctgcttca 1325  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 13939428 - 13939498
Alignment:
Q  56 cccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaataagagcaataaa 126  Q
    ||||||| ||||| ||| || |||||||||||| ||| |||  |||| |||||||||||||||||||||||    
T  13939428 cccaccaacgaaaagggtcgaaaatcattcaatgtctgaggattgtctactttaggaataagagcaataaa 13939498  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 34601730 - 34601842
Alignment:
Q  14 agtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaa 113  Q
    |||||| ||||||  ||||| ||||||| |||||| |  || |||||||  |||||||| |||||||||||||| |  | ||| |||||||| || ||||    
T  34601730 agtctattagctaacaccttagccaaaattttatacaagcttcccaccaaagaaatggggcggaaatcattcaaacgttgaggactgtcaaccttcggaa 34601829  T
Q  114 taagagcaataaa 126  Q
    | |||||||||||    
T  34601830 tgagagcaataaa 34601842  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 34628272 - 34628384
Alignment:
Q  14 agtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaa 113  Q
    |||||| ||||||  ||||| ||||||| |||||| |  || |||||||  |||||||| |||||||||||||| |  | ||| |||||||| || ||||    
T  34628272 agtctattagctaacaccttagccaaaattttatacaagcttcccaccaaagaaatggggcggaaatcattcaaacgttgaggactgtcaaccttcggaa 34628371  T
Q  114 taagagcaataaa 126  Q
    | |||||||||||    
T  34628372 tgagagcaataaa 34628384  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 34723006 - 34723118
Alignment:
Q  14 agtctactagctagaaccttcgccaaaactttataaacactacccaccagcgaaatgggacggaaatcattcaatctcttagggctgtcaactttaggaa 113  Q
    |||||| ||||||  ||||| ||||||| |||||| |  || |||||||  |||||||| |||||||||||||| |  | ||| |||||||| || ||||    
T  34723006 agtctattagctaacaccttagccaaaattttatacaagcttcccaccaaagaaatggggcggaaatcattcaaacgttgaggactgtcaaccttcggaa 34723105  T
Q  114 taagagcaataaa 126  Q
    | |||||||||||    
T  34723106 tgagagcaataaa 34723118  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 20587117 - 20587077
Alignment:
Q  16 tctactagctagaaccttcgccaaaactttataaacactac 56  Q
    |||| |||||| |||||||||||||| ||||||||||||||    
T  20587117 tctattagctaaaaccttcgccaaaattttataaacactac 20587077  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 12377361 - 12377321
Alignment:
Q  101 tcaactttaggaataagagcaataaaagttgagttaatacc 141  Q
    ||||||||||| ||||||||||||||||| || ||||||||    
T  12377361 tcaactttaggtataagagcaataaaagtggaattaatacc 12377321  T

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