View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1111_low_241 (Length: 233)
Name: NF1111_low_241
Description: NF1111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1111_low_241 |
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Alignment Details
Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41858606 - 41858690
Alignment:
| Q |
1 |
tttattgtatcatttgtatacatgcacaattactgcacagtgatatgatgtcatgctttaccaagttttaacccttttcatctca |
85 |
Q |
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| T |
41858606 |
tttattgtatcatttgtatacatgcacaattactgcacagtgatatgatgtcatgctttaccaagttttaccccttttcatctca |
41858690 |
T |
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