View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1111_low_291 (Length: 201)
Name: NF1111_low_291
Description: NF1111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1111_low_291 |
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Alignment Details
Target: chr2 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 43416758 - 43416632
Alignment:
| Q |
1 |
tagttaagctgtgcttcagatataatactctattgtcttgtcacttcagtatggcagcataagaattaggaataaaggaaagaatgcataaagaatctct |
100 |
Q |
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| T |
43416758 |
tagttaagctgtgcttcagatataatactctattgtcttgtcacttcagcatggcagcataagaattaggaataaaggaaagaatgcataaagaatctct |
43416659 |
T |
|
| Q |
101 |
tgtgcaacacttctttctcctatgata |
127 |
Q |
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||||||||||||||||||||||||||| |
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| T |
43416658 |
tgtgcaacacttctttctcctatgata |
43416632 |
T |
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