View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1111_low_5 (Length: 651)

Name: NF1111_low_5
Description: NF1111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1111_low_5
NF1111_low_5
[»] scaffold0154 (1 HSPs)
scaffold0154 (306-637)||(11729-12061)
[»] chr3 (91 HSPs)
chr3 (306-637)||(53915750-53916082)
chr3 (306-637)||(1313082-1313412)
chr3 (305-637)||(51943041-51943374)
chr3 (306-631)||(27635887-27636212)
chr3 (306-637)||(53917918-53918250)
chr3 (306-637)||(457950-458287)
chr3 (306-629)||(746422-746752)
chr3 (306-637)||(455573-455910)
chr3 (306-606)||(10621827-10622127)
chr3 (304-637)||(25533105-25533445)
chr3 (308-580)||(42989954-42990228)
chr3 (306-637)||(42991953-42992289)
chr3 (306-637)||(4104149-4104483)
chr3 (305-606)||(41848803-41849114)
chr3 (517-637)||(6561694-6561813)
chr3 (306-380)||(6561613-6561687)
chr3 (555-637)||(15780781-15780863)
chr3 (537-629)||(23633363-23633455)
chr3 (316-472)||(11066255-11066429)
chr3 (543-629)||(28761690-28761776)
chr3 (316-389)||(53974124-53974197)
chr3 (557-637)||(11170327-11170407)
chr3 (558-637)||(1626937-1627016)
chr3 (543-637)||(880706-880800)
chr3 (559-637)||(10956281-10956359)
chr3 (559-637)||(10958577-10958655)
chr3 (555-637)||(45882860-45882942)
chr3 (556-637)||(4308535-4308616)
chr3 (316-456)||(11072644-11072801)
chr3 (537-626)||(53597144-53597232)
chr3 (557-637)||(3859451-3859531)
chr3 (557-637)||(5522869-5522949)
chr3 (557-637)||(11163073-11163153)
chr3 (537-629)||(24979611-24979702)
chr3 (338-461)||(54287487-54287627)
chr3 (555-634)||(1321362-1321441)
chr3 (558-637)||(28137549-28137628)
chr3 (558-637)||(47701849-47701928)
chr3 (558-637)||(53468709-53468788)
chr3 (543-637)||(890025-890119)
chr3 (559-637)||(6231374-6231452)
chr3 (555-637)||(26720469-26720551)
chr3 (555-637)||(48361925-48362006)
chr3 (556-637)||(51727260-51727341)
chr3 (558-629)||(36011751-36011822)
chr3 (558-637)||(43423717-43423796)
chr3 (543-629)||(3314593-3314679)
chr3 (555-629)||(12268228-12268302)
chr3 (557-635)||(22114561-22114639)
chr3 (559-637)||(43421669-43421747)
chr3 (391-456)||(53974011-53974077)
chr3 (557-637)||(6066050-6066131)
chr3 (557-637)||(18097154-18097235)
chr3 (557-637)||(18099424-18099504)
chr3 (555-637)||(32264293-32264379)
chr3 (556-637)||(35918203-35918284)
chr3 (556-637)||(43226008-43226089)
chr3 (557-637)||(5191576-5191656)
chr3 (537-637)||(32218999-32219098)
chr3 (557-629)||(35777344-35777416)
chr3 (558-629)||(5927026-5927097)
chr3 (557-637)||(6063700-6063782)
chr3 (558-629)||(28100303-28100374)
chr3 (558-637)||(28102256-28102335)
chr3 (559-629)||(3306724-3306794)
chr3 (558-616)||(28180948-28181006)
chr3 (559-629)||(51675017-51675087)
chr3 (556-621)||(6484307-6484372)
chr3 (556-637)||(43228213-43228294)
chr3 (544-629)||(53591105-53591190)
chr3 (545-629)||(23636938-23637022)
chr3 (543-629)||(31151256-31151344)
chr3 (555-616)||(24177200-24177261)
chr3 (556-637)||(39715392-39715472)
chr3 (537-629)||(1618917-1619012)
chr3 (555-637)||(18162585-18162666)
chr3 (306-346)||(27000083-27000123)
chr3 (557-629)||(50493922-50493994)
chr3 (558-637)||(47149149-47149233)
chr3 (558-629)||(54691836-54691906)
chr3 (538-619)||(4560537-4560618)
chr3 (545-601)||(13419787-13419844)
chr3 (558-635)||(10084645-10084726)
chr3 (555-635)||(10191565-10191649)
chr3 (555-626)||(13420437-13420508)
chr3 (598-637)||(30005805-30005844)
chr3 (598-637)||(38890004-38890043)
chr3 (598-637)||(42990268-42990307)
chr3 (557-612)||(53896475-53896530)
chr3 (558-637)||(54884081-54884160)
chr3 (557-606)||(6719396-6719445)
[»] chr4 (93 HSPs)
chr4 (306-637)||(5100743-5101074)
chr4 (306-637)||(56030189-56030521)
chr4 (306-637)||(14787687-14788021)
chr4 (306-637)||(17662490-17662826)
chr4 (306-606)||(22132686-22132987)
chr4 (306-629)||(44600102-44600428)
chr4 (305-580)||(22134943-22135220)
chr4 (306-637)||(24347959-24348295)
chr4 (322-579)||(30136331-30136589)
chr4 (306-456)||(47211158-47211308)
chr4 (306-472)||(9022060-9022225)
chr4 (306-507)||(38890517-38890701)
chr4 (305-629)||(10112625-10112942)
chr4 (413-629)||(19322547-19322766)
chr4 (434-637)||(53404998-53405207)
chr4 (305-460)||(9863498-9863650)
chr4 (308-407)||(19322410-19322510)
chr4 (517-637)||(47210996-47211122)
chr4 (316-472)||(38209098-38209259)
chr4 (555-637)||(22802990-22803072)
chr4 (555-637)||(48486314-48486396)
chr4 (306-377)||(14789500-14789571)
chr4 (517-637)||(18709419-18709547)
chr4 (555-637)||(22801118-22801200)
chr4 (386-472)||(54929094-54929180)
chr4 (543-644)||(24446828-24446929)
chr4 (555-637)||(5198415-5198497)
chr4 (543-637)||(19095865-19095959)
chr4 (555-637)||(47274722-47274804)
chr4 (555-626)||(619714-619785)
chr4 (386-465)||(10979676-10979755)
chr4 (555-637)||(24888791-24888873)
chr4 (555-629)||(40091679-40091753)
chr4 (556-637)||(36378288-36378369)
chr4 (557-637)||(11434952-11435032)
chr4 (537-629)||(15032800-15032892)
chr4 (558-637)||(3937465-3937543)
chr4 (555-629)||(8756513-8756588)
chr4 (543-629)||(18537734-18537821)
chr4 (322-384)||(5516771-5516833)
chr4 (555-637)||(22044646-22044728)
chr4 (543-637)||(38928434-38928528)
chr4 (555-637)||(51015241-51015323)
chr4 (556-637)||(6764835-6764916)
chr4 (555-637)||(36919841-36919925)
chr4 (556-637)||(40637070-40637151)
chr4 (558-637)||(2891314-2891394)
chr4 (545-637)||(12396101-12396193)
chr4 (545-637)||(12401063-12401155)
chr4 (558-637)||(38270242-38270321)
chr4 (555-637)||(22046941-22047023)
chr4 (555-629)||(24878984-24879058)
chr4 (559-629)||(33415751-33415821)
chr4 (559-637)||(37313322-37313400)
chr4 (537-629)||(16186100-16186193)
chr4 (543-616)||(18535106-18535179)
chr4 (557-629)||(9174410-9174482)
chr4 (557-629)||(16934407-16934479)
chr4 (557-637)||(18847150-18847230)
chr4 (537-637)||(52942702-52942802)
chr4 (555-637)||(24880446-24880528)
chr4 (562-620)||(41997494-41997552)
chr4 (555-637)||(9148246-9148330)
chr4 (560-629)||(9176738-9176807)
chr4 (556-637)||(14633316-14633396)
chr4 (320-389)||(29609914-29609983)
chr4 (557-637)||(37089627-37089710)
chr4 (556-637)||(47868397-47868478)
chr4 (557-629)||(16932053-16932125)
chr4 (557-637)||(7941316-7941398)
chr4 (389-448)||(29609838-29609897)
chr4 (556-637)||(2485128-2485210)
chr4 (555-637)||(31849855-31849937)
chr4 (555-637)||(5637721-5637807)
chr4 (556-637)||(16453305-16453386)
chr4 (537-606)||(25357614-25357683)
chr4 (555-637)||(36921750-36921833)
chr4 (316-387)||(54929198-54929267)
chr4 (559-606)||(40999234-40999281)
chr4 (559-637)||(13543953-13544036)
chr4 (386-428)||(14647172-14647214)
chr4 (558-629)||(12102088-12102161)
chr4 (555-637)||(38409194-38409282)
chr4 (556-637)||(8631675-8631760)
chr4 (558-637)||(6132871-6132949)
chr4 (598-637)||(11006493-11006532)
chr4 (598-637)||(11008822-11008861)
chr4 (558-637)||(18409603-18409681)
chr4 (556-603)||(36380370-36380417)
chr4 (556-629)||(16455283-16455356)
chr4 (558-606)||(52043716-52043765)
chr4 (555-591)||(3824875-3824911)
chr4 (391-435)||(5516703-5516747)
[»] chr7 (77 HSPs)
chr7 (306-637)||(37412384-37412716)
chr7 (306-637)||(21989853-21990183)
chr7 (306-637)||(7092431-7092768)
chr7 (306-637)||(7094678-7095015)
chr7 (306-637)||(11756925-11757262)
chr7 (304-637)||(3035413-3035754)
chr7 (306-637)||(31156167-31156500)
chr7 (303-637)||(18345234-18345574)
chr7 (306-637)||(20299155-20299492)
chr7 (306-637)||(20625734-20626071)
chr7 (306-637)||(20629625-20629962)
chr7 (306-637)||(20642044-20642381)
chr7 (306-637)||(42331255-42331593)
chr7 (305-637)||(38393682-38394019)
chr7 (306-629)||(7472244-7472574)
chr7 (305-606)||(1606170-1606472)
chr7 (306-637)||(7470278-7470621)
chr7 (306-637)||(28485261-28485599)
chr7 (306-629)||(28487249-28487578)
chr7 (306-580)||(38395986-38396262)
chr7 (306-637)||(7351908-7352246)
chr7 (306-637)||(7349529-7349867)
chr7 (306-580)||(1849665-1849941)
chr7 (306-574)||(21470614-21470883)
chr7 (375-637)||(13099732-13099996)
chr7 (306-506)||(47865328-47865528)
chr7 (314-637)||(24258166-24258496)
chr7 (306-626)||(3676997-3677301)
chr7 (306-454)||(443326-443474)
chr7 (386-606)||(43253811-43254035)
chr7 (410-637)||(20297163-20297395)
chr7 (309-472)||(40281824-40281989)
chr7 (517-637)||(443508-443628)
chr7 (537-629)||(7188476-7188568)
chr7 (555-637)||(27306485-27306567)
chr7 (316-472)||(10690684-10690845)
chr7 (555-637)||(44515-44597)
chr7 (537-616)||(20091818-20091897)
chr7 (555-626)||(22392424-22392495)
chr7 (543-637)||(11355197-11355291)
chr7 (555-637)||(18567564-18567646)
chr7 (543-637)||(20137365-20137459)
chr7 (555-637)||(31435303-31435385)
chr7 (316-369)||(20297108-20297161)
chr7 (557-637)||(1049551-1049631)
chr7 (557-637)||(22251798-22251878)
chr7 (545-637)||(22828889-22828981)
chr7 (543-637)||(4296191-4296286)
chr7 (558-637)||(21679981-21680060)
chr7 (555-621)||(35580-35646)
chr7 (558-637)||(21678020-21678099)
chr7 (558-637)||(44724533-44724612)
chr7 (323-472)||(12310442-12310608)
chr7 (555-637)||(26804524-26804602)
chr7 (538-629)||(30906313-30906405)
chr7 (558-637)||(42223110-42223190)
chr7 (559-629)||(24465503-24465574)
chr7 (543-637)||(9680753-9680852)
chr7 (558-628)||(39146252-39146322)
chr7 (314-360)||(43254023-43254069)
chr7 (557-629)||(25542484-25542555)
chr7 (557-637)||(40836998-40837078)
chr7 (560-629)||(24817613-24817682)
chr7 (556-637)||(48457601-48457686)
chr7 (558-629)||(24748548-24748619)
chr7 (558-637)||(25276095-25276174)
chr7 (559-637)||(9679009-9679092)
chr7 (555-629)||(3878522-3878602)
chr7 (555-626)||(6332177-6332248)
chr7 (598-637)||(1849975-1850014)
chr7 (353-384)||(6628853-6628884)
chr7 (386-433)||(12484976-12485023)
chr7 (386-433)||(12506407-12506454)
chr7 (353-384)||(12657667-12657698)
chr7 (353-383)||(12485044-12485074)
chr7 (353-383)||(12506475-12506505)
chr7 (583-629)||(21592407-21592453)
[»] chr5 (67 HSPs)
chr5 (303-637)||(26097418-26097756)
chr5 (306-637)||(26098507-26098841)
chr5 (306-637)||(18468698-18469034)
chr5 (308-637)||(18511468-18511800)
chr5 (306-637)||(27912219-27912559)
chr5 (309-637)||(18509574-18509904)
chr5 (306-580)||(25803707-25803982)
chr5 (306-606)||(27910135-27910437)
chr5 (306-602)||(3373332-3373630)
chr5 (326-637)||(10586549-10586865)
chr5 (306-621)||(18596326-18596654)
chr5 (305-606)||(15551924-15552227)
chr5 (306-489)||(21288529-21288713)
chr5 (386-637)||(18466453-18466707)
chr5 (313-458)||(17415748-17415893)
chr5 (439-637)||(40221340-40221545)
chr5 (306-410)||(6661929-6662033)
chr5 (517-630)||(41585969-41586082)
chr5 (386-601)||(15143262-15143475)
chr5 (306-385)||(40221282-40221361)
chr5 (555-631)||(36402590-36402666)
chr5 (519-629)||(6661446-6661555)
chr5 (555-629)||(2818600-2818674)
chr5 (555-637)||(12556179-12556261)
chr5 (555-637)||(20507718-20507800)
chr5 (306-360)||(18466411-18466465)
chr5 (555-629)||(25921737-25921811)
chr5 (316-389)||(5779144-5779217)
chr5 (561-637)||(10474579-10474655)
chr5 (557-637)||(31542678-31542758)
chr5 (558-629)||(36208524-36208596)
chr5 (558-629)||(17072827-17072898)
chr5 (558-629)||(25904047-25904118)
chr5 (558-629)||(34530930-34531001)
chr5 (306-360)||(15143220-15143274)
chr5 (565-637)||(21288715-21288787)
chr5 (557-637)||(31545023-31545103)
chr5 (558-629)||(24126800-24126871)
chr5 (555-637)||(4236570-4236652)
chr5 (555-629)||(21947968-21948041)
chr5 (543-637)||(31472869-31472963)
chr5 (556-637)||(10529355-10529436)
chr5 (557-637)||(38882048-38882129)
chr5 (556-637)||(39854426-39854506)
chr5 (557-637)||(31179627-31179707)
chr5 (556-636)||(37706037-37706117)
chr5 (558-637)||(2174863-2174942)
chr5 (538-637)||(6756419-6756517)
chr5 (555-637)||(16776098-16776181)
chr5 (558-637)||(20042994-20043073)
chr5 (558-627)||(20044954-20045023)
chr5 (556-637)||(4409999-4410084)
chr5 (558-637)||(695833-695912)
chr5 (558-637)||(1189865-1189949)
chr5 (537-616)||(42770697-42770775)
chr5 (557-619)||(31466252-31466314)
chr5 (386-459)||(32520241-32520316)
chr5 (558-637)||(39398249-39398327)
chr5 (558-608)||(2723911-2723961)
chr5 (556-637)||(17818746-17818826)
chr5 (555-606)||(2144878-2144930)
chr5 (598-637)||(25804009-25804048)
chr5 (598-637)||(34477310-34477349)
chr5 (598-637)||(34479675-34479714)
chr5 (353-387)||(2532750-2532784)
chr5 (418-472)||(6661594-6661648)
chr5 (539-606)||(4897638-4897710)
[»] scaffold0005 (4 HSPs)
scaffold0005 (306-637)||(51709-52043)
scaffold0005 (306-377)||(50159-50230)
scaffold0005 (556-637)||(183896-183976)
scaffold0005 (386-428)||(170076-170118)
[»] chr2 (60 HSPs)
chr2 (305-637)||(42923765-42924095)
chr2 (306-637)||(42452449-42452782)
chr2 (306-637)||(23452493-23452829)
chr2 (306-606)||(35215883-35216184)
chr2 (306-580)||(35218290-35218565)
chr2 (306-576)||(27583643-27583907)
chr2 (316-472)||(28568584-28568740)
chr2 (306-435)||(27136368-27136505)
chr2 (316-472)||(15693583-15693755)
chr2 (313-401)||(34575608-34575696)
chr2 (555-637)||(40032314-40032396)
chr2 (316-464)||(41303457-41303623)
chr2 (316-381)||(28568346-28568411)
chr2 (557-637)||(24162468-24162548)
chr2 (537-629)||(37963191-37963283)
chr2 (558-637)||(22163203-22163282)
chr2 (543-637)||(31733021-31733115)
chr2 (557-637)||(13910300-13910380)
chr2 (557-637)||(19504601-19504681)
chr2 (557-637)||(27104718-27104798)
chr2 (558-629)||(11578368-11578439)
chr2 (558-637)||(19007560-19007639)
chr2 (386-457)||(39286971-39287042)
chr2 (559-637)||(6264401-6264479)
chr2 (543-629)||(17849022-17849108)
chr2 (555-637)||(22287592-22287674)
chr2 (555-637)||(22407665-22407747)
chr2 (555-637)||(42064432-42064514)
chr2 (555-619)||(12342684-12342748)
chr2 (387-472)||(7502638-7502723)
chr2 (559-637)||(15539731-15539809)
chr2 (555-629)||(18800566-18800640)
chr2 (543-637)||(28196542-28196636)
chr2 (411-507)||(34575528-34575617)
chr2 (556-629)||(45280249-45280322)
chr2 (561-637)||(3022086-3022162)
chr2 (558-629)||(11739824-11739895)
chr2 (386-465)||(41304806-41304884)
chr2 (555-637)||(6259071-6259153)
chr2 (559-637)||(19502267-19502345)
chr2 (555-637)||(43623824-43623906)
chr2 (555-637)||(21520949-21521033)
chr2 (537-606)||(40699209-40699278)
chr2 (558-621)||(14837193-14837256)
chr2 (320-384)||(39286892-39286952)
chr2 (559-637)||(38020064-38020142)
chr2 (543-629)||(45239240-45239331)
chr2 (556-629)||(22874060-22874133)
chr2 (537-601)||(20147040-20147104)
chr2 (319-370)||(7502582-7502633)
chr2 (566-629)||(34979843-34979906)
chr2 (316-389)||(41304898-41304964)
chr2 (556-637)||(5377685-5377770)
chr2 (543-629)||(17848350-17848434)
chr2 (555-606)||(35107217-35107268)
chr2 (598-637)||(38020162-38020201)
chr2 (588-617)||(38414311-38414340)
chr2 (555-606)||(17897528-17897580)
chr2 (545-597)||(20146903-20146955)
chr2 (558-606)||(20589581-20589629)
[»] chr1 (96 HSPs)
chr1 (306-637)||(47905956-47906293)
chr1 (306-637)||(31735779-31736115)
chr1 (306-637)||(17324894-17325227)
chr1 (306-637)||(28998511-28998844)
chr1 (306-637)||(29004227-29004560)
chr1 (306-637)||(39931762-39932096)
chr1 (306-606)||(24325347-24325648)
chr1 (306-629)||(9459683-9460013)
chr1 (306-637)||(9463502-9463840)
chr1 (306-610)||(48664852-48665167)
chr1 (306-606)||(15295137-15295439)
chr1 (306-637)||(27337196-27337532)
chr1 (306-637)||(27339388-27339730)
chr1 (306-637)||(2949489-2949815)
chr1 (333-637)||(21948445-21948756)
chr1 (305-495)||(4131693-4131883)
chr1 (305-495)||(45693835-45694025)
chr1 (306-491)||(6115532-6115718)
chr1 (306-494)||(6997214-6997395)
chr1 (304-421)||(46432521-46432638)
chr1 (344-504)||(6996067-6996221)
chr1 (418-606)||(46432017-46432207)
chr1 (306-459)||(16561131-16561284)
chr1 (428-636)||(2510583-2510801)
chr1 (530-637)||(6995958-6996065)
chr1 (386-472)||(11693580-11693666)
chr1 (316-472)||(13785662-13785835)
chr1 (440-610)||(26520403-26520580)
chr1 (316-435)||(32260746-32260882)
chr1 (389-472)||(14352759-14352842)
chr1 (555-637)||(13215022-13215104)
chr1 (555-637)||(41646861-41646943)
chr1 (555-637)||(47451589-47451671)
chr1 (545-626)||(49495468-49495549)
chr1 (555-629)||(28207332-28207406)
chr1 (555-637)||(38925736-38925818)
chr1 (558-631)||(14183850-14183923)
chr1 (532-637)||(20302378-20302482)
chr1 (537-637)||(31423132-31423232)
chr1 (537-629)||(42922157-42922249)
chr1 (541-629)||(50079087-50079175)
chr1 (557-637)||(51749982-51750062)
chr1 (538-629)||(18800835-18800925)
chr1 (445-507)||(6115479-6115541)
chr1 (543-629)||(11457741-11457827)
chr1 (555-637)||(15823487-15823569)
chr1 (559-637)||(18307054-18307132)
chr1 (559-637)||(25248772-25248850)
chr1 (559-629)||(25251541-25251611)
chr1 (543-629)||(50076938-50077024)
chr1 (557-637)||(6822958-6823038)
chr1 (557-637)||(13761780-13761860)
chr1 (343-472)||(10115509-10115653)
chr1 (555-637)||(16428594-16428676)
chr1 (559-637)||(17318838-17318916)
chr1 (537-629)||(8347535-8347627)
chr1 (555-637)||(28842434-28842518)
chr1 (555-616)||(30790673-30790734)
chr1 (584-637)||(4131637-4131692)
chr1 (557-637)||(10400086-10400166)
chr1 (557-621)||(16231544-16231608)
chr1 (537-629)||(39462443-39462534)
chr1 (557-629)||(51752308-51752380)
chr1 (558-629)||(2617460-2617531)
chr1 (558-637)||(17186386-17186465)
chr1 (558-629)||(31489859-31489930)
chr1 (556-637)||(9241344-9241425)
chr1 (557-637)||(6823827-6823908)
chr1 (556-629)||(12302771-12302849)
chr1 (373-426)||(13112046-13112099)
chr1 (558-619)||(50248848-50248909)
chr1 (557-629)||(16226110-16226182)
chr1 (557-637)||(20291400-20291480)
chr1 (316-383)||(11693686-11693753)
chr1 (537-636)||(14098229-14098327)
chr1 (558-637)||(18839531-18839610)
chr1 (556-637)||(6756469-6756550)
chr1 (304-345)||(6997388-6997429)
chr1 (537-629)||(8349314-8349407)
chr1 (518-607)||(16561373-16561461)
chr1 (555-629)||(28840619-28840695)
chr1 (537-609)||(16431024-16431096)
chr1 (589-637)||(31425277-31425325)
chr1 (590-629)||(6115345-6115384)
chr1 (558-621)||(17324009-17324072)
chr1 (555-598)||(43104100-43104143)
chr1 (557-629)||(47177301-47177377)
chr1 (557-629)||(47179652-47179728)
chr1 (555-634)||(3579877-3579958)
chr1 (558-635)||(50307807-50307884)
chr1 (353-384)||(16855265-16855296)
chr1 (306-337)||(21964366-21964397)
chr1 (558-629)||(26613503-26613577)
chr1 (555-616)||(15669669-15669731)
chr1 (543-609)||(40133864-40133930)
chr1 (564-621)||(13125730-13125787)
[»] scaffold0031 (1 HSPs)
scaffold0031 (305-637)||(78882-79217)
[»] chr6 (56 HSPs)
chr6 (304-629)||(12195779-12196106)
chr6 (306-637)||(2629141-2629479)
chr6 (306-637)||(30034859-30035196)
chr6 (314-637)||(17852275-17852600)
chr6 (306-629)||(30966923-30967251)
chr6 (306-580)||(18317751-18318027)
chr6 (306-580)||(26932883-26933158)
chr6 (306-637)||(19704825-19705165)
chr6 (304-507)||(5275727-5275930)
chr6 (308-615)||(17011781-17012080)
chr6 (305-507)||(22858343-22858537)
chr6 (308-472)||(20526548-20526708)
chr6 (328-472)||(30445243-30445404)
chr6 (537-629)||(15532945-15533036)
chr6 (537-635)||(15541398-15541495)
chr6 (543-630)||(15346355-15346442)
chr6 (558-637)||(24338704-24338783)
chr6 (558-637)||(32447572-32447651)
chr6 (543-637)||(3390343-3390437)
chr6 (558-635)||(13057173-13057250)
chr6 (556-621)||(30729100-30729165)
chr6 (558-637)||(25477253-25477332)
chr6 (555-637)||(1072133-1072215)
chr6 (555-637)||(14507431-14507513)
chr6 (555-637)||(15530378-15530460)
chr6 (556-637)||(28241577-28241658)
chr6 (316-472)||(30443022-30443195)
chr6 (558-629)||(3233995-3234065)
chr6 (555-637)||(8995455-8995537)
chr6 (555-637)||(9019902-9019984)
chr6 (560-637)||(3632194-3632271)
chr6 (557-637)||(11983285-11983365)
chr6 (565-637)||(14459021-14459093)
chr6 (557-637)||(19227664-19227744)
chr6 (558-621)||(22490618-22490681)
chr6 (556-637)||(1230505-1230586)
chr6 (558-635)||(13039733-13039810)
chr6 (558-637)||(3630120-3630199)
chr6 (555-616)||(3028127-3028188)
chr6 (556-629)||(12186331-12186406)
chr6 (543-621)||(15367000-15367085)
chr6 (590-629)||(15719665-15719704)
chr6 (598-637)||(26065005-26065044)
chr6 (598-637)||(26084974-26085013)
chr6 (555-637)||(32279973-32280054)
chr6 (558-639)||(14466312-14466393)
chr6 (565-637)||(13870678-13870749)
chr6 (557-637)||(20915612-20915694)
chr6 (598-637)||(4816487-4816526)
chr6 (320-363)||(12158532-12158575)
chr6 (558-629)||(12161819-12161889)
chr6 (555-606)||(25466457-25466508)
chr6 (558-608)||(10584105-10584155)
chr6 (532-577)||(28038021-28038066)
chr6 (340-384)||(3833176-3833220)
chr6 (543-629)||(26945112-26945200)
[»] chr8 (54 HSPs)
chr8 (307-637)||(41382420-41382752)
chr8 (306-637)||(41384493-41384823)
chr8 (306-637)||(15808962-15809298)
chr8 (305-629)||(43529870-43530199)
chr8 (306-637)||(28283475-28283813)
chr8 (306-629)||(3873750-3874081)
chr8 (306-629)||(608470-608805)
chr8 (305-464)||(32339093-32339252)
chr8 (306-423)||(3265635-3265752)
chr8 (457-637)||(181434-181616)
chr8 (517-637)||(32339264-32339388)
chr8 (517-637)||(24873437-24873563)
chr8 (543-637)||(14419447-14419541)
chr8 (543-637)||(13858740-13858834)
chr8 (543-644)||(35872627-35872728)
chr8 (555-637)||(4424015-4424097)
chr8 (555-637)||(14807748-14807830)
chr8 (555-637)||(15072707-15072789)
chr8 (557-637)||(44720842-44720922)
chr8 (555-629)||(2468362-2468436)
chr8 (555-637)||(3886174-3886256)
chr8 (543-637)||(5622994-5623088)
chr8 (555-637)||(28251823-28251905)
chr8 (556-637)||(26775199-26775280)
chr8 (558-637)||(27107153-27107232)
chr8 (558-637)||(33541644-33541723)
chr8 (555-637)||(27826983-27827065)
chr8 (555-637)||(27829294-27829376)
chr8 (556-629)||(1225164-1225237)
chr8 (537-629)||(15185974-15186066)
chr8 (557-637)||(18810707-18810787)
chr8 (386-472)||(11701364-11701447)
chr8 (316-387)||(13986304-13986374)
chr8 (558-637)||(14477276-14477355)
chr8 (558-637)||(25952521-25952600)
chr8 (537-612)||(31162192-31162267)
chr8 (559-637)||(36865538-36865617)
chr8 (543-637)||(30480759-30480853)
chr8 (557-637)||(18812892-18812972)
chr8 (537-629)||(27910994-27911086)
chr8 (537-629)||(27957413-27957505)
chr8 (316-387)||(30679186-30679256)
chr8 (555-637)||(15067978-15068060)
chr8 (555-637)||(12517280-12517364)
chr8 (589-637)||(37214466-37214514)
chr8 (558-637)||(5372434-5372512)
chr8 (389-460)||(13986214-13986285)
chr8 (558-629)||(21482322-21482393)
chr8 (538-601)||(6375969-6376032)
chr8 (586-629)||(21480542-21480585)
chr8 (556-606)||(14419784-14419834)
chr8 (589-629)||(3005890-3005931)
chr8 (358-387)||(27820149-27820178)
chr8 (316-360)||(11701435-11701479)
[»] scaffold0511 (1 HSPs)
scaffold0511 (306-637)||(1735-2074)
[»] scaffold0468 (3 HSPs)
scaffold0468 (307-421)||(2070-2184)
scaffold0468 (449-507)||(2022-2080)
scaffold0468 (518-629)||(1895-2004)
[»] scaffold0133 (2 HSPs)
scaffold0133 (306-454)||(4546-4694)
scaffold0133 (517-629)||(4727-4839)
[»] scaffold1674 (1 HSPs)
scaffold1674 (306-400)||(1-95)
[»] scaffold0339 (1 HSPs)
scaffold0339 (555-637)||(3947-4029)
[»] scaffold0131 (1 HSPs)
scaffold0131 (555-637)||(14969-15051)
[»] scaffold0250 (1 HSPs)
scaffold0250 (557-637)||(2832-2912)
[»] scaffold0224 (1 HSPs)
scaffold0224 (537-629)||(16082-16174)
[»] scaffold0008 (2 HSPs)
scaffold0008 (389-459)||(57836-57905)
scaffold0008 (316-387)||(57926-57995)
[»] scaffold0552 (1 HSPs)
scaffold0552 (556-637)||(1087-1168)
[»] scaffold0038 (1 HSPs)
scaffold0038 (556-637)||(41739-41820)
[»] scaffold0472 (1 HSPs)
scaffold0472 (557-629)||(6151-6223)
[»] scaffold0004 (1 HSPs)
scaffold0004 (543-629)||(79797-79883)
[»] scaffold0025 (2 HSPs)
scaffold0025 (555-637)||(69547-69633)
scaffold0025 (555-637)||(73279-73365)
[»] scaffold0057 (1 HSPs)
scaffold0057 (559-616)||(16924-16981)
[»] scaffold0533 (1 HSPs)
scaffold0533 (343-384)||(2232-2273)
[»] scaffold0045 (1 HSPs)
scaffold0045 (543-626)||(85169-85251)
[»] scaffold0474 (1 HSPs)
scaffold0474 (316-366)||(10443-10493)


Alignment Details
Target: scaffold0154 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 12061 - 11729
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12061 tgttgtagtatgattcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttgtgctgaaaatatatttatgg 11962  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  11961 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 11862  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  11861 agaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaacctggagatag 11762  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||| |||||||||||| |||||    
T  11761 agggggctgaaacagggatttagaatgacaaca 11729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 262; Significance: 1e-146; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 53916082 - 53915750
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53916082 tgttgtagtatgactcaaaatttgagggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 53915983  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  53915982 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 53915883  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||          ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  53915882 agaaaaaaaaacgtatcttgagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaaccttaagatag 53915783  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||| ||||| ||| |||||    
T  53915782 agggggctgaaacaagggtttaggatgacaaca 53915750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 1313082 - 1313412
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  1313082 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaatgatttgtttcaaatatattttgtgttgaaaatatatttatgg 1313181  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  1313182 acaataaatatatttctgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 1313281  T
Q  506 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga 605  Q
    ||         ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1313282 agaaaaaaaaagtatctttagtgtgatattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaaccttgagataga 1313381  T
Q  606 gggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||| |||| ||||||||||    
T  1313382 gggggctgaaacaagg-tttacaatggcaaca 1313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 305 - 637
Target Start/End: Original strand, 51943041 - 51943374
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51943041 gtgttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 51943140  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || |||||    
T  51943141 gacaataaatatatttttgtaccgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgtaaatattctttcattgaag 51943240  T
Q  505 gag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    |||          ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  51943241 gagaaagaaaaacgtatcttcagtgtggtattcgttccaaatttatgatttatacttttactataaatatagaccttgaatcagagtaaacctggagata 51943340  T
Q  604 gagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||| |||||||||| | ||||||| |||||||    
T  51943341 gagggtgctgaaacaaaggtttagaaaggcaaca 51943374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 306 - 631
Target Start/End: Complemental strand, 27636212 - 27635887
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  27636212 tgttgtagtatgatttaaaatttgatggatggagaatattgttgctaaaaatataaaatattagtttcaaatatattttgtgctgaaaatatatttatgg 27636113  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27636112 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 27636013  T
Q  506 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttata-cttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||         |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| ||| |||||||||||||||||||    
T  27636012 ag-aaaaaaatgtatcttcagtgtggtattcgttccaaatttatgagttatattttttactacaaatatagaccttgaattagagtaaaccttgagatag 27635914  T
Q  605 agggggctgaaacaaggatttagaatg 631  Q
    ||||||||||||||||| |||||||||    
T  27635913 agggggctgaaacaagggtttagaatg 27635887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 53918250 - 53917918
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  53918250 tgttatagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaacatatatttatgg 53918151  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  53918150 acaataaatatatttttttaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 53918051  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||          ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |    
T  53918050 agaaaaaaaaacgtatcttcagtgtggtattcgtttcaaatttatgagttatacttttactataaatatagaccttgaatcagattaaaccttgagatgg 53917951  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||| | ||||||||| |||||    
T  53917950 agggggctgaaacaatggtttagaatgacaaca 53917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 457950 - 458287
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  457950 tgttgtagtatgactcaaaatttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttgtgg 458049  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  458050 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 458149  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||    ||    
T  458150 agaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaaccttgagaga 458249  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  458250 gatagagggggctgaaacaagggtttagaaaggcaaca 458287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 306 - 629
Target Start/End: Original strand, 746422 - 746752
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  746422 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 746521  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  746522 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 746621  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 598  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  746622 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 746721  T
Q  599 agatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||| |||||||    
T  746722 agatagagggggctgaaacaagggtttagaa 746752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 455573 - 455910
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  455573 tgttgtagtatgactcaaaatttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttgtgg 455672  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  455673 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 455772  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||    ||    
T  455773 agaaaaaaaaaacgtatcttcagtgcggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaaccttgagaga 455872  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  455873 gatagagggggctgaaacaagggtttagaaaggcaaca 455910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 306 - 606
Target Start/End: Complemental strand, 10622127 - 10621827
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  10622127 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaagatatatttatgg 10622028  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  10622027 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 10621928  T
Q  506 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga 605  Q
    ||         ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| |||    
T  10621927 agaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagaga 10621828  T
Q  606 g 606  Q
    |    
T  10621827 g 10621827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 304 - 637
Target Start/End: Original strand, 25533105 - 25533445
Alignment:
Q  304 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttat 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25533105 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttttgctgaaaatatatttat 25533204  T
Q  404 ggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaa 503  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  25533205 ggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaa 25533304  T
Q  504 ggagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------ 597  Q
    ||||         |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||          
T  25533305 ggag-aaaaaaacgtatcttcagtgtgatatttgttctaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagaga 25533403  T
Q  598 --gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
      |||||||||||||||||||||||| ||||||| |||||||    
T  25533404 gagagatagagggggctgaaacaagggtttagaaaggcaaca 25533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 308 - 580
Target Start/End: Original strand, 42989954 - 42990228
Alignment:
Q  308 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggac 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  42989954 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttttgctgaaagtatatttatggac 42990053  T
Q  408 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 507  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  42990054 aataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaaggag 42990153  T
Q  508 --nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 580  Q
               ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42990154 aaaaaaaaaatgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagacctt 42990228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 42991953 - 42992289
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42991953 tgttgtagtatgactcaaaatttgatggatggagaatattgttgttaaaaatataaaaggtttgtttcaaatatattttgtgctgaaaatatatttatgg 42992052  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  42992053 acaataaatatatttttgtattgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 42992152  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 600  Q
    ||          |||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||| |||||  ||||   ||||| ||    |||    
T  42992153 agaaaaaaaaacgtatcttcagtgtaatattaattccaaatttatgagttatacttttactataaatatataccttgtatcatgctaaactttaagagag 42992252  T
Q  601 atagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| |||| || |||||||    
T  42992253 atagagggggctgaaacaagggtttaaaaaggcaaca 42992289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 4104483 - 4104149
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4104483 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatactttatgctgaaaatatatttatgg 4104384  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  4104383 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatattctttcactgaagg 4104284  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           |||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    ||    
T  4104283 agaaaaaaaaaacgta---tcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagaga 4104187  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  4104186 gatagagggggctgaaacaagggtttagaaaggcaaca 4104149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 305 - 606
Target Start/End: Original strand, 41848803 - 41849114
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41848803 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 41848902  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||     
T  41848903 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaaaggaatattatatttttgatgcaaatattctttaactgaaa 41849002  T
Q  505 gag----------nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaac 594  Q
    |||                   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  |||||  |||||    
T  41849003 gagaaaaaaaaaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagacattgtatcaggctaaac 41849102  T
Q  595 cttgagatagag 606  Q
     |||||| ||||    
T  41849103 tttgagagagag 41849114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 517 - 637
Target Start/End: Original strand, 6561694 - 6561813
Alignment:
Q  517 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    |||||||||||||| |||||||||||||||||||||||||| || | |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  6561694 gtatcttcagtgtgatattcgttccaaatttatgagttatatttct-ctataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaa 6561792  T
Q  617 caaggatttagaatggcaaca 637  Q
    ||||| ||||||| |||||||    
T  6561793 caagggtttagaaaggcaaca 6561813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 6561613 - 6561687
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatata 380  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6561613 tgttgtagtatgactcgaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatata 6561687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 15780781 - 15780863
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| | |||||||||||||||||||||||| |||||||||||||||    
T  15780781 atacttttactataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttagaatggcaaca 15780863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 537 - 629
Target Start/End: Original strand, 23633363 - 23633455
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| ||||||||  ||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  23633363 gttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagagggctaaaacaaggatttagaa 23633455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 316 - 472
Target Start/End: Original strand, 11066255 - 11066429
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaat-ataaaagatttgtttcaaatatattttgtgct-----------------gaaaatat 397  Q
    ||||||| ||||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||| |||||||                 |||||||     
T  11066255 tgactcataatttgatggatgaagaatattgttgctaaaaaagataaatgatttgtttcaaatatatcttgtgctttcggaagattgttgttgaaaatac 11066354  T
Q  398 atttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    ||||||||||||||||||||||||| |||| ||||||| |  |||||||||||||||||||| |||| |||||||    
T  11066355 atttatggacaataaatatatttttttaccatatgaaggaatatttgatgcaaatatatttttaaagagaatatt 11066429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 543 - 629
Target Start/End: Complemental strand, 28761776 - 28761690
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||  ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||| |||||||    
T  28761776 aatttatgagggatacttttactataaatatagactttgcatcagagtaaaccttgagatagagggggttgaaacaagggtttagaa 28761690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 53974197 - 53974124
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgct 389  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  53974197 tgactcaaaatttgatggatgaagaatgttgttgttaaaaatataaaagatttgtttcaattatattttgtgct 53974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 11170327 - 11170407
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  11170327 acttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 11170407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 1627016 - 1626937
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  1627016 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 1626937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 880800 - 880706
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  880800 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagaggggtctgaaacaagagtttagaatggcaaca 880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 559 - 637
Target Start/End: Complemental strand, 10956359 - 10956281
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||  |||||||||||| |  ||||||||||||||||||||||| |||||||||||||||    
T  10956359 ttttactataaatatagaccttgtatcagagtaaacatgaagatagagggggctgaaacaagggtttagaatggcaaca 10956281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 559 - 637
Target Start/End: Complemental strand, 10958655 - 10958577
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||  |||||||||||| |  ||||||||||||||||||||||| |||||||||||||||    
T  10958655 ttttactataaatatagaccttgtatcagagtaaacataaagatagagggggctgaaacaagggtttagaatggcaaca 10958577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 45882860 - 45882942
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||| |||||||  ||||||||||||||||||||||||| ||||||| |||||||    
T  45882860 atacttttactataaatatagaccttgtatcatagtaaactatgagatagagggggctgaaacaagggtttagaaaggcaaca 45882942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 4308616 - 4308535
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  4308616 tactttcactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 4308535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 316 - 456
Target Start/End: Original strand, 11072644 - 11072801
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgct-----------------gaaaatata 398  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||||| |||||||||||||||||| |||||||                 ||||||| |    
T  11072644 tgactcaaaatttgatggatgaagaagattgttgcaaaaaatataaatgatttgtttcaaatatatcttgtgcttccagaagattgttgctgaaaataca 11072743  T
Q  399 tttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatat 456  Q
    ||||||||||| ||||| ||||||||||||||| | | | ||||||||||||||||||    
T  11072744 tttatggacaacaaatagatttttgtaccgtattacggaagatttgatgcaaatatat 11072801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 537 - 626
Target Start/End: Original strand, 53597144 - 53597232
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 626  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||| ||||    
T  53597144 gttccaattttatgagggatacttttactataaatatagaccttgtatcagagtaaaccttgagataga-ggggatgaaacaagggttta 53597232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 3859451 - 3859531
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  3859451 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 3859531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 5522949 - 5522869
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  5522949 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 5522869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 11163073 - 11163153
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||| |||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  11163073 acttttacgataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 11163153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 537 - 629
Target Start/End: Original strand, 24979611 - 24979702
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||| | ||| ||||||| |||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||| |||||||    
T  24979611 gttccaaattt-taagtaatactttcactataaatatataccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 24979702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 54287627 - 54287487
Alignment:
Q  338 agaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgct-----------------gaaaatatatttatggacaataaatatattt 420  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||                 ||||||||||||||||| |||||||| ||||    
T  54287627 agaagattgttgctaaaaatataaaagatttgtttcaaatatatttcgtgcttccaaaagattgctgttgaaaatatatttatggataataaatacattt 54287528  T
Q  421 ttgtaccgtatgaagaacgatttgatgcaaatatattttga 461  Q
    |||||| |||||||| |  ||||||||||||||||||||||    
T  54287527 ttgtactgtatgaaggaatatttgatgcaaatatattttga 54287487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 555 - 634
Target Start/End: Original strand, 1321362 - 1321441
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggca 634  Q
    ||||||||||||||||||||||| ||  ||||||| |||| |||||||||||||||||||||||||| ||||||| ||||    
T  1321362 atacttttactataaatatagactttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggca 1321441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 28137628 - 28137549
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  28137628 cttttactataaatatatgcgttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 28137549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 47701928 - 47701849
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  47701928 cttttactataaatatagacattgtatcagtgtaaaccttgagataaagggggctgaaacaagggtttagaaaggcaaca 47701849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 53468788 - 53468709
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  53468788 cttttactataaatatagacattgtatcagtgtaaacctttagataaagggggctgaaacaagggtttagaatggcaaca 53468709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 890119 - 890025
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||||  ||  ||||| |||||||||||||||||||  |||||||||||| |||||||||||||||    
T  890119 aatttatgagggatgcttttactataaatatagatattgtatcagtgtaaaccttgagatagaggaagctgaaacaagggtttagaatggcaaca 890025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 559 - 637
Target Start/End: Original strand, 6231374 - 6231452
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||| ||  ||||| ||||| |||||||||||| |||||||||||||||||||||| |||||||    
T  6231374 ttttactataaatatagacattgtatcagtgtaaatcttgagatagagcgggctgaaacaaggatttagaaaggcaaca 6231452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 26720469 - 26720551
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||| |||| | ||||||||||||||||||| |||| ||||||| |||||||    
T  26720469 atacttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaataagggtttagaaaggcaaca 26720551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 48362006 - 48361925
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||||||| ||||||||||||||||| ||||||||| |||||    
T  48362006 atacttttactataaatatagaccttgtatcatagtaaactttgagatacagggggctgaaacaagg-tttagaatgacaaca 48361925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 51727341 - 51727260
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||| ||||||||||||||||| ||||||| |||||||    
T  51727341 tactttcactataaatatagaccttgtatcagagcaaactttgagataaagggggctgaaacaagggtttagaaaggcaaca 51727260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 36011751 - 36011822
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| ||  || || ||||||||||||||| |||||||||||||||||||||||||    
T  36011751 cttttactataaatatagacattgtattagtgtaaaccttgagataaagggggctgaaacaaggatttagaa 36011822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 43423796 - 43423717
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||  ||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  43423796 cttttactataaatatagacattgtatcactgtaaaccttgagaaagagggggctgaaacaagggtttagaaaggcaaca 43423717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 543 - 629
Target Start/End: Original strand, 3314593 - 3314679
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||  || |||||||||||||||||||  ||  ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  3314593 aatttatgagggatgcttttactataaatatagatattgtatcagtgtaaaccttgagatagagggggctgaaataagggtttagaa 3314679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 12268302 - 12268228
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||| |||  |||||||||||| ||||||||||||| |||||||||||  |||||||    
T  12268302 atacttttactataaatatagaacttgtatcagagtaaactttgagatagagggagctgaaacaagagtttagaa 12268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 635
Target Start/End: Complemental strand, 22114639 - 22114561
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 635  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||| ||||||||||||||| ||||||| |||||    
T  22114639 acttttactataaatatagaccttgtatcagagcaaacttggagatagaaggggctgaaacaagggtttagaaaggcaa 22114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 637
Target Start/End: Complemental strand, 43421747 - 43421669
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||| ||  ||||| ||||||||||||||||| |||| |||||||||| ||||||| |||||||    
T  43421747 ttttactataaatatagacattgtatcagtgtaaaccttgagatagaaggggttgaaacaagggtttagaaaggcaaca 43421669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 53974077 - 53974011
Alignment:
Q  391 aaaatatatttatggacaataaatatatttttgtaccgtatg-aagaacgatttgatgcaaatatat 456  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  53974077 aaaatatatttatagacaataaatatatttttgtaccgtatgaaaggaagatttgatgcaaatatat 53974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 6066131 - 6066050
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagag-ggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  |||| || |||| ||||||||||| ||||||||||||||| ||||||| |||||||    
T  6066131 acttttactataaatatagaccttgtatcaaagcaaactttgagatagaggggggctgaaacaagggtttagaaaggcaaca 6066050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 18097235 - 18097154
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaacctt-gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  |||| ||||||| |  ||||||||||||||| |||||||| |||||||||||||||    
T  18097235 acttttactataaatatagaccttgtatcatagtaaacttgagagatagagggggctcaaacaagggtttagaatggcaaca 18097154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 18099504 - 18099424
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaacctt-gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||| ||||||||||  |||||||||||| |  |||||||||||||||||||||||| |||||||||||||||    
T  18099504 acttttactataa-tatagaccttgtatcagagtaaacttgagagatagagggggctgaaacaagggtttagaatggcaaca 18099424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 32264379 - 32264293
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagta----aaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||    ||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  32264379 atacttttactataaatatagaccttgtatcagagtaaattaactttgagatagagggggctcaaacaagggtttagaaaggcaaca 32264293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 35918284 - 35918203
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  |||| || |||  |||||||||||||||||||||||||| ||||||| |||||||    
T  35918284 tactttcactataaatatagaccttgtatcatagcaaattttgagatagagggggctgaaacaagggtttagaaaggcaaca 35918203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 43226008 - 43226089
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||| ||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  43226008 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 43226089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 5191576 - 5191656
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  |||  || |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  5191576 acttttactataaatatagaccttgtatctaagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 5191656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 537 - 637
Target Start/End: Original strand, 32218999 - 32219098
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaac 636  Q
    ||||||||||| | ||| ||||||| | ||||||||||||||||  ||| || ||||| |||||||||||||||||||||||||| || |||| ||||||    
T  32218999 gttccaaattt-taagtaatactttcagtataaatatagaccttgtatctgactaaactttgagatagagggggctgaaacaagggttcagaaaggcaac 32219097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 629
Target Start/End: Original strand, 35777344 - 35777416
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||| ||  |||| || |||| |||||||||||||||||||||||||| |||||||    
T  35777344 acttttactataaatatagacattgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 35777416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 5927097 - 5927026
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| ||  ||| | |||||||||||||||||| |||||||||||||| |||||||    
T  5927097 cttttactataaatatagacattgtatcggtgtaaaccttgagatagagagggctgaaacaagggtttagaa 5927026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 6063782 - 6063700
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  |||| || |||| ||||||  |||||||||||||||||||| ||||||| |||||||    
T  6063782 acttttactataaatatagaccttgtatcaaagcaaactttgagagatagagggggctgaaacaagggtttagaaaggcaaca 6063700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 28100374 - 28100303
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||  | ||  |||||||||| |||||||||||||||||||||||||||| |||||||    
T  28100374 cttttactataaatataagcgttgtatcagagtaacccttgagatagagggggctgaaacaagggtttagaa 28100303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 28102335 - 28102256
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||  | ||  || ||||||| |||||||||||||||||||||||||||| ||||||| |||||||    
T  28102335 cttttactataaatataagcgttgtattagagtaacccttgagatagagggggctgaaacaagggtttagaaaggcaaca 28102256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 629
Target Start/End: Original strand, 3306724 - 3306794
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||| ||  ||||| |||||||| |||||| ||||||||||||||||| |||||||    
T  3306724 ttttactataaatatagacattgtatcagtgtaaacctagagatatagggggctgaaacaagggtttagaa 3306794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 558 - 616
Target Start/End: Original strand, 28180948 - 28181006
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||    
T  28180948 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaa 28181006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 629
Target Start/End: Complemental strand, 51675087 - 51675017
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||| ||  ||||  |||||| |||||||||||||||||||||||||| |||||||    
T  51675087 ttttactataaatatagacgttgtatcaatgtaaacgttgagatagagggggctgaaacaagggtttagaa 51675017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 6484307 - 6484372
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 621  Q
    ||||||| |||||||||||| | ||  ||||| |||||||||||||||||||||||||||||||||    
T  6484307 tacttttgctataaatataggcattgtatcagtgtaaaccttgagatagagggggctgaaacaagg 6484372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 43228213 - 43228294
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||| ||  ||||||| |||| | |||||||||||||||||||||||  ||||||| |||||||    
T  43228213 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagagtttagaaaggcaaca 43228294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 629
Target Start/End: Original strand, 53591105 - 53591190
Alignment:
Q  544 atttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||  || |||||||||||||||||||| ||  || || ||||||||||||||||||| ||||||||||||  |||||||    
T  53591105 atttatgaggaatgcttttactataaatatagacattgtataagtgtaaaccttgagatagaggaggctgaaacaagagtttagaa 53591190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 545 - 629
Target Start/End: Original strand, 23636938 - 23637022
Alignment:
Q  545 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||  ||| ||||| |||||||||| || ||  ||||||||||||||||||||||||| |||| |||||||| |||||||    
T  23636938 tttatgagggataattttaatataaatatatactttgtatcagagtaaaccttgagatagaggaggctaaaacaagggtttagaa 23637022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 543 - 629
Target Start/End: Original strand, 31151256 - 31151344
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctg-aaacaaggatttagaa 629  Q
    ||||||||||  || |||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||| |||||||| |||||||    
T  31151256 aatttatgagggatgcttttactataaatatagactttgtatcagatgtaaacctcgagatagagggggctgaaaacaagggtttagaa 31151344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 616
Target Start/End: Original strand, 24177200 - 24177261
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    ||||||||| ||||||||||||||||  |||| ||||||| ||||| |||||||||||||||    
T  24177200 atacttttattataaatatagaccttgtatcatagtaaacattgagctagagggggctgaaa 24177261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 39715392 - 39715472
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||| |||||||||||||| ||  ||||| ||||||||||||||||| |||||||||| |||| ||||||  |||||||    
T  39715392 tacttttgctataaatatagacattgtatcagtgtaaaccttgagataga-ggggctgaaataagggtttagagaggcaaca 39715472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 1619012 - 1618917
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagatagagggggctg-aaacaaggatttagaa 629  Q
    ||||||| ||||||||  ||||||| ||||||||||||||||||  | || ||||||||||  |||| ||||||||||| |||||||| |||||||    
T  1619012 gttccaattttatgagggatactttgactataaatatagaccttgtaccatagtaaaccttgagagacagagggggctgaaaacaagggtttagaa 1618917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 18162585 - 18162666
Alignment:
Q  555 atacttttactataaatatagaccttaaatca-gagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||| |||||||| | ||||||||  ||| |||||||||| ||||||| |||||||    
T  18162585 atacttttactataaatatagaccttgtatcatgagtaaacttggagataga--gggatgaaacaagggtttagaaaggcaaca 18162666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 27000083 - 27000123
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattg 346  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  27000083 tgttgtagtatgactgaaaatttgatggatggagaatattg 27000123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 629
Target Start/End: Original strand, 50493922 - 50493994
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||| ||||||||||||||||||  |||| || ||||   |||||||||||||||||||||||| |||||||    
T  50493922 actttcactataaatatagaccttgtatcaaagcaaactgagagatagagggggctgaaacaagggtttagaa 50493994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 47149233 - 47149149
Alignment:
Q  558 cttttactataaatatagaccttaaatcaga-gtaaaccttgag----atagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||  |||||| |||  |||||||    ||||||||||||||||||||| ||||||| |||||||    
T  47149233 cttttactataaatatagaccttgtatcagatgtaggccttgagggagatagagggggctgaaacaagggtttagaaaggcaaca 47149149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 54691906 - 54691836
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||| | ||  ||||||||||||||| |||||||||||| | |||||||| |||||||    
T  54691906 cttttactataaatataggctttgtatcagagtaaaccttaagatagaggggg-taaaacaaggttttagaa 54691836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 538 - 619
Target Start/End: Complemental strand, 4560618 - 4560537
Alignment:
Q  538 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaa 619  Q
    |||||| |||| |||  ||||||| ||||||| |||||||  |  |||| ||||||| ||||||||||||||||||||||||    
T  4560618 ttccaattttacgagggatactttcactataagtatagactatgtatcatagtaaacattgagatagagggggctgaaacaa 4560537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 545 - 601
Target Start/End: Original strand, 13419787 - 13419844
Alignment:
Q  545 tttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgaga 601  Q
    ||||||||  ||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  13419787 tttatgagggatacttttactataaatatagaccttatatcagatgtaaaacttgaga 13419844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 635
Target Start/End: Complemental strand, 10084726 - 10084645
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaa 635  Q
    |||||||||||||||||||||||  ||| ||| |||| ||    |||||||||||||||| ||||||| ||||||| |||||    
T  10084726 cttttactataaatatagaccttgtatcggagcaaactttgagagagatagagggggctggaacaagggtttagaaaggcaa 10084645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 635
Target Start/End: Complemental strand, 10191649 - 10191565
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaa 635  Q
    ||||||||||||||||||||||||||  ||| ||| |||| ||    |||||| ||||||||| ||||||| ||||||| |||||    
T  10191649 atacttttactataaatatagaccttgtatcggagcaaactttgagagagataaagggggctggaacaagggtttagaaaggcaa 10191565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 626
Target Start/End: Complemental strand, 13420508 - 13420437
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 626  Q
    |||||||||||||||||||||   ||  |||| || ||||||||||||| ||| ||||||||||||| ||||    
T  13420508 atacttttactataaatataggttttgtatcaaagcaaaccttgagatataggaggctgaaacaagggttta 13420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Original strand, 30005805 - 30005844
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  30005805 gagatagagggggctgaaacaagggtttagaaaggcaaca 30005844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Original strand, 38890004 - 38890043
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  38890004 gagatagagggggctgaaacaagggtttagaaaggcaaca 38890043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Original strand, 42990268 - 42990307
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  42990268 gagatagagggggctgaaacaagggtttagaaaggcaaca 42990307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 557 - 612
Target Start/End: Complemental strand, 53896530 - 53896475
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggct 612  Q
    ||||| ||||||||||||||||||  |||| || |||| |||||||||||||||||    
T  53896530 actttcactataaatatagaccttgtatcaaagcaaactttgagatagagggggct 53896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 54884081 - 54884160
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||| ||||||||| || ||  ||||  |||||||||||||||||||| |||  ||||||| ||||||| |||||||    
T  54884081 cttttaccataaatataaacattggatcattgtaaaccttgagatagagggagctcgaacaagggtttagaaaggcaaca 54884160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 606
Target Start/End: Complemental strand, 6719445 - 6719396
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagag 606  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||| ||||    
T  6719445 acttttactataaatatagaccttgtatcagagcaaactttgagagagag 6719396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 5100743 - 5101074
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5100743 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgttttaaatatattttgtgctgaaaatatatttatgg 5100842  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  5100843 acaacaaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 5100942  T
Q  506 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga 605  Q
    ||         ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  5100943 agaaaaaaaacgtatcttcaatctggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagggtaaaccttgagataga 5101042  T
Q  606 gggggctgaaacaaggatttagaatggcaaca 637  Q
    |||| ||||||||| | ||||||||| |||||    
T  5101043 ggggactgaaacaaaggtttagaatgacaaca 5101074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 56030189 - 56030521
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56030189 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 56030288  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  56030289 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttggtgcaaatattctttcactgaagg 56030388  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||          |||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||||    
T  56030389 agaaaaaaaaaagtatcttcggtgtggtattctttccaaatttatgagttatatttttactataaatataggctttgtatcagagtaaaccttgagatag 56030488  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    | ||||||||||||||| ||||||||| |||||    
T  56030489 aaggggctgaaacaagggtttagaatgacaaca 56030521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 14788021 - 14787687
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14788021 tgttgtagtatgactcaaaatttgatggatggagaataatgttgctaaaaatataaaagatttgtttcaaatatattttgtggtgaaaatatatttatgg 14787922  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  14787921 acaataaatatatttttgtaccgtataaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 14787822  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagat 602  Q
    ||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||| ||  |||||    
T  14787821 agaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgtatcatactaaactttgagagat 14787722  T
Q  603 agagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||| |||||||||||||||    
T  14787721 agagggggctgaaacaagggtttagaatggcaaca 14787687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 17662826 - 17662490
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17662826 tgttgtagtatgactacaaatttgatggatggagaatattgttgctaaaaatataaaagatttgttttaaatatattttgtgctgaaaatatatttatgg 17662727  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  17662726 acaataaatatatttttgtaccgtacgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 17662627  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 600  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||    |||    
T  17662626 agaaaaaaaaaagtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcagagcaaactttgagagag 17662527  T
Q  601 atagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  17662526 atagagggggctgaaacaagggtttagaaaggcaaca 17662490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 306 - 606
Target Start/End: Complemental strand, 22132987 - 22132686
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22132987 tgttgtagtatgattcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 22132888  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  22132887 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 22132788  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| ||    
T  22132787 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 22132688  T
Q  605 ag 606  Q
    ||    
T  22132687 ag 22132686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 306 - 629
Target Start/End: Complemental strand, 44600428 - 44600102
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44600428 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 44600329  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  44600328 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttaaaagggaatattatatttttgatgcaaatattctttcactgaagg 44600229  T
Q  506 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagat 602  Q
    ||            | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  || | || |||| |||||||    
T  44600228 aggaaaaaaaaaacgaatcttcagtgtggtatttgtttcaaatttatgagttatacttttactataaatatagaccttgtattaaagcaaactttgagat 44600129  T
Q  603 agagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||| |||||||    
T  44600128 agagggggctgaaacaagggtttagaa 44600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 305 - 580
Target Start/End: Complemental strand, 22135220 - 22134943
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22135220 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 22135121  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  22135120 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgattcaaatattctttcactgaag 22135021  T
Q  505 gag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 580  Q
    |||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22135020 gagaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagacctt 22134943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 24347959 - 24348295
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24347959 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgc-gaaaatatatttatgg 24348057  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  24348058 acaataaatatatttttgtattgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 24348157  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||   ||||| ||    ||    
T  24348158 agaaaaaaaaaaagtatcttcaatgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaagctaaactttgagaga 24348257  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  24348258 gatagagggggctgaaacaagggtttagaaaggcaaca 24348295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 322 - 579
Target Start/End: Original strand, 30136331 - 30136589
Alignment:
Q  322 aaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaatatatttt 421  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30136331 aaaatttgatgaatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatggacaataaatatatttt 30136430  T
Q  422 tgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag--nnnnnnnnngta 519  Q
    ||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||| || ||||||||           |||    
T  30136431 tgtactgtatgaagaacgatttgatgcaaatatattttaaaagagaatattatatttttgattcaaatattctttcattgaaggagaaaaaaaaaacgta 30136530  T
Q  520 tcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacct 579  Q
    ||||||||||| ||||||||| |||||||| ||||||| |||  ||||||||||| ||||    
T  30136531 tcttcagtgtgatattcgttctaaatttattagttata-tttctctataaatatatacct 30136589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 306 - 456
Target Start/End: Complemental strand, 47211308 - 47211158
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47211308 tgttgtagtatgacttaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctcaaaatatatttatgg 47211209  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatat 456  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47211208 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatat 47211158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 306 - 472
Target Start/End: Original strand, 9022060 - 9022225
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||| ||||||||| |||||||   |||||||||| | |||||||||| ||||||||||||||||||||| |||||||||||||||||| |    
T  9022060 tgttgtagtatgattcaaaattttatggatgagaaatattgttgttgaaaatataaatgatttgtttcaaatatattttttgctgaaaatatatttat-g 9022158  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  9022159 acaataaatatatttttctaccgtatgaagaaagatttgatgcaaatatattttaaaagggaatatt 9022225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 306 - 507
Target Start/End: Complemental strand, 38890701 - 38890517
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  |||||    
T  38890701 tgttgtagcatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatt------------------tatgg 38890620  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaaggg-aatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| |||    
T  38890619 acaataaatatatttttgtattgtatgaaggacgatttgatgcaaatatattttgaaagggaaatattatatttttgatgcaaatattctttcactaaag 38890520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 305 - 629
Target Start/End: Original strand, 10112625 - 10112942
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    |||||||||||||||| |||||||| || ||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||| ||||||||||    
T  10112625 gtgttgtagtatgacttaaaatttgttgaatgaagaatattgttgctaaaaatataaaag----gtttcaaatatattttgtgctgaaactatatttatg 10112720  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||| ||||||||| | ||||||||| ||||||| |||||||| |||||       ||||||||||||||| || |||| |||    
T  10112721 gacaataaatatatttttgtatcgtatgaaggaagatttgatgtaaatata-tttgaaagagaata-------tttgatgcaaatattatttcactaaag 10112812  T
Q  505 gag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttata-cttttactataaatatagaccttaaatcaga-gtaaaccttgag 600  Q
    |||           |||||||||| |||  || ||||||||||||||||||||||  ||||  ||||||||||||| ||  |||||| |||||||| |||    
T  10112813 gagaaaaaaaaaatgtatcttcagcgtgaaatccgttccaaatttatgagttatatttttttttataaatatagacattgtatcagatgtaaacctcgag 10112912  T
Q  601 atagagggggctg-aaacaaggatttagaa 629  Q
    | |||||| | || |||||||| |||||||    
T  10112913 agagagggagttgaaaacaagggtttagaa 10112942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 413 - 629
Target Start/End: Original strand, 19322547 - 19322766
Alignment:
Q  413 atatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag----n 508  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||         
T  19322547 atatatttttgtactgtataaaggacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaggagaaaaa 19322646  T
Q  509 nnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagaggg 608  Q
            ||||||||| |||| ||||| |||||||||||||||||||| ||   ||||||||||||| |||  ||||||||||||||||||||||||||    
T  19322647 aaagaaatgtatcttcaatgtgatattcattccaaatttatgagttata-ttcatctataaatatagatcttgtatcagagtaaaccttgagatagaggg 19322745  T
Q  609 ggctgaaacaaggatttagaa 629  Q
    || |||||||||| |||||||    
T  19322746 ggatgaaacaagggtttagaa 19322766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 434 - 637
Target Start/End: Original strand, 53404998 - 53405207
Alignment:
Q  434 agaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggagnnnnnnnnn---gtatcttcagtgtg 530  Q
    |||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||| ||||||            |||| |||||||||    
T  53404998 agaacgatttgatgcaaatatattttgaaaggaaaaattatatttttgatgcaaatattctttcactaaaggagaaaaaaaaaaacgtattttcagtgtg 53405097  T
Q  531 gtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga---gggggctgaaacaaggatttag 627  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| |||    ||||||||||||||| |||||    
T  53405098 gtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaagggtttag 53405197  T
Q  628 aatggcaaca 637  Q
    || |||||||    
T  53405198 aaaggcaaca 53405207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 305 - 460
Target Start/End: Original strand, 9863498 - 9863650
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    |||||||| |||||||||||||||| |||||| |  |||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  9863498 gtgttgtaatatgactcaaaatttgttggatgaaatatattgttactaaaaatataaatgatttgtttcaaacatattttgtgctaaaaatatatttatg 9863597  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttg 460  Q
     |||||||||||||||||||   | |||||| | ||||||||||||||||||||||    
T  9863598 aacaataaatatatttttgt---gcatgaaggaagatttgatgcaaatatattttg 9863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 407
Target Start/End: Original strand, 19322410 - 19322510
Alignment:
Q  308 ttgtagtatgactcaaaatttgatggatggagaatattgtt-gctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgga 406  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  19322410 ttgtagtatgactcaaaatttgatggatggagaatattttttgctaaaaatataaaagatttgttttaaatatattttatactgaaaatatatttatgga 19322509  T
Q  407 c 407  Q
    |    
T  19322510 c 19322510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 517 - 637
Target Start/End: Complemental strand, 47211122 - 47210996
Alignment:
Q  517 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------gagatagaggggg 610  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |||||||||||||    
T  47211122 gtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagggagatagaggggg 47211023  T
Q  611 ctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||| ||||||| |||||||    
T  47211022 ctgaaacaagggtttagaaaggcaaca 47210996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 38209259 - 38209098
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgct--gaaaatatatttatggaca--ata 411  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||||||||||||   | || ||  || | || |  |||    
T  38209259 tgactcaaaatttgatggatgaaaaatattgttgttaaaaatataaaagatttgttttaaatatattttgtgcttcaagaagattgttgttgaaaatata 38209160  T
Q  412 aatatatttttgtaccgtatgaagaacgatttgatgcaaatatat-tttgaaagggaatatt 472  Q
    ||||||||||||||| |||||||| | |||||||||||||||||| ||||||| ||||||||    
T  38209159 aatatatttttgtactgtatgaaggaagatttgatgcaaatatatatttgaaaaggaatatt 38209098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 22803072 - 22802990
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  22803072 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatggcaaca 22802990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 48486314 - 48486396
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  48486314 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatggcaaca 48486396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 14789571 - 14789500
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaat 377  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  14789571 tgttgtagtatgactcaaaatttgatggatgaagaataatgttgctaaaaatataaaagatttgtttcaaat 14789500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 517 - 637
Target Start/End: Complemental strand, 18709547 - 18709419
Alignment:
Q  517 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--------gagatagaggg 608  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  || ||  ||||| ||        |||||||||||    
T  18709547 gtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtattaggctaaactttgagagagagagatagaggg 18709448  T
Q  609 ggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||| ||||||| |||||||    
T  18709447 ggctgaaacaagggtttagaaaggcaaca 18709419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 22801200 - 22801118
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  22801200 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatgacaaca 22801118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 386 - 472
Target Start/End: Complemental strand, 54929180 - 54929094
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| ||  ||||||||    
T  54929180 tgctgaaaatatatttatggacaaaaaatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttaataggaatatt 54929094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 543 - 644
Target Start/End: Complemental strand, 24446929 - 24446828
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaacagctag 642  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  24446929 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaacaactag 24446830  T
Q  643 gg 644  Q
    ||    
T  24446829 gg 24446828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 5198415 - 5198497
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  5198415 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 5198497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 543 - 637
Target Start/End: Original strand, 19095865 - 19095959
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  19095865 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaatgacaaca 19095959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 47274722 - 47274804
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  47274722 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 47274804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 555 - 626
Target Start/End: Complemental strand, 619785 - 619714
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 626  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||    
T  619785 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggttta 619714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 10979676 - 10979755
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagg 465  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||||| |||||    
T  10979676 tgctgaaaatatatttatggacaacaaatatatttttgtgctgtatgaaggaagatttgatgcaaatatatttttaaagg 10979755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 24888791 - 24888873
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  24888791 atacttttactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaaaggcaaca 24888873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 40091753 - 40091679
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  40091753 atacttttactataaatatagaccttgtatcaaagtaaactttgagatagagggggctgaaacaagggtttagaa 40091679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 36378288 - 36378369
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| ||  |||||| |||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  36378288 tacttttactataaatatagactttgtatcagaataaaccttgagatagacggggctgaaacaagggtttagaaaggcaaca 36378369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 11434952 - 11435032
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  11434952 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 11435032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 15032892 - 15032800
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| ||||||||  ||||||||||||||||||||||| |   | ||||||||||||||||||| ||||||||||||||||| |||||||    
T  15032892 gttccaattttatgagggatacttttactataaatatagacttggtaccagagtaaaccttgagataaagggggctgaaacaagggtttagaa 15032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 3937543 - 3937465
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||| |||||||||||| ||||||| |||||||    
T  3937543 cttttactataaatatagactttta-tcagagtaaaccttgagatagagggagctgaaacaagggtttagaaaggcaaca 3937465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 8756588 - 8756513
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  8756588 atacttttactataaatatagaccttgtatcagagtaaaccttgagatagaaggggctgaaaacaagggtttagaa 8756513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 543 - 629
Target Start/End: Complemental strand, 18537821 - 18537734
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aaacaaggatttagaa 629  Q
    ||||||||||| || ||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||||| |||||||    
T  18537821 aatttatgagtgatgcttttactataaatatagatcttgtatcagagtaaacattgagatagagggggctgaaaacaagggtttagaa 18537734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 5516833 - 5516771
Alignment:
Q  322 aaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatttt 384  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  5516833 aaaatttgatgaatggagaatattgttgctaaaaatataaatgaattgtttcaaatatatttt 5516771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 22044728 - 22044646
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  22044728 atacttttactataaatataggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 22044646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 38928528 - 38928434
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||| | ||  || |||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  38928528 aatttatgagggattcttttactataaatataggctttgtattagagtaaaccttgagatagagggggctgaaacaagagtttagaaaggcaaca 38928434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 51015241 - 51015323
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||| ||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  51015241 atacttttactataaatatagactttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 51015323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 6764835 - 6764916
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  6764835 tactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 6764916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 36919925 - 36919841
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttg--agatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| |||  ||||| ||||||||||||||||| ||||||| |||||||    
T  36919925 atacttttactataaatatagaccttgtatcagagtaaactttgatagatatagggggctgaaacaagggtttagaaaggcaaca 36919841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 40637070 - 40637151
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  40637070 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 40637151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 2891314 - 2891394
Alignment:
Q  558 cttttactataaatatagacctta-aatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  |||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  2891314 cttttactataaatatagacattgtaatcagtgtaaaccttaagatagagggggctgaaacaagggtttagaaaggcaaca 2891394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 545 - 637
Target Start/End: Complemental strand, 12396193 - 12396101
Alignment:
Q  545 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||  || |||||||||||||||||||| ||  || |  ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  12396193 tttatgagggatgcttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaaggatttagaaaggcaaca 12396101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 545 - 637
Target Start/End: Complemental strand, 12401155 - 12401063
Alignment:
Q  545 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||  || |||||||||||||||||||| ||  || |  ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  12401155 tttatgagggatgcttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaaggatttagaaaggcaaca 12401063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 38270321 - 38270242
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||| | ||||||||||||| ||||||| |||||||    
T  38270321 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaagaggctgaaacaagggtttagaaaggcaaca 38270242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 22047023 - 22046941
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||||  ||| ||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  22047023 atacttttactataaatataggccttgtatcggagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 22046941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 629
Target Start/End: Original strand, 24878984 - 24879058
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  ||| |||||||| | |||||||||||||||||||| ||| |||||||    
T  24878984 atacttttactataaatatagaccttgtatccgagtaaacttggagatagagggggctgaaactagggtttagaa 24879058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 629
Target Start/End: Complemental strand, 33415821 - 33415751
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||| |||||||| | ||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  33415821 ttttactacaaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 33415751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 637
Target Start/End: Complemental strand, 37313400 - 37313322
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||   ||  |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  37313400 ttttactataaatataggttttgtatcaaagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 37313322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 16186193 - 16186100
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggct-gaaacaaggatttagaa 629  Q
    ||||||| |||| |||  |||||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  16186193 gttccaattttaggagggatacttttactataaatataaaccttgtatcagagtaaaccttgagagagagggggctaaaaacaagggtttagaa 16186100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 18535179 - 18535106
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    ||||||||||  || ||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  18535179 aatttatgagggatgcttttacaataaatatagacctcgattcagagtaaaccttgagatagagggggctgaaa 18535106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 629
Target Start/End: Complemental strand, 9174482 - 9174410
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||  |||| || |||| | |||||||||||||||||||||||| |||||||    
T  9174482 acttttactataaatatagaccttgtatcaaagcaaacttggagatagagggggctgaaacaagggtttagaa 9174410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 629
Target Start/End: Complemental strand, 16934479 - 16934407
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||  |||| || |||| ||||||||||||||||||| |||||| |||||||    
T  16934479 acttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgatacaagggtttagaa 16934407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 18847150 - 18847230
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  |||| |  |||| ||||||||||||||| |||||||||| ||||||| |||||||    
T  18847150 acttttactataaatatagaccttgtatcaaaacaaactttgagatagagggggttgaaacaagggtttagaaaggcaaca 18847230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 637
Target Start/End: Complemental strand, 52942802 - 52942702
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagacctt--aaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggca 634  Q
    ||||||||||| | ||| ||||||| ||||||||||||||||||  | |||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||    
T  52942802 gttccaaattt-taagtaatactttcactataaatatagaccttgtatatcagactaaactttgagatagagggg-ctgaaacaagggtttagaaaggca 52942705  T
Q  635 aca 637  Q
    |||    
T  52942704 aca 52942702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 24880446 - 24880528
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||| |||||||| | ||||||||||||||  |||| ||| ||||||| |||||||    
T  24880446 atacttttactataaatatagaccttgtatcggagtaaacttggagatagagggggcgtaaactagggtttagaaaggcaaca 24880528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 41997494 - 41997552
Alignment:
Q  562 tactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaag 620  Q
    |||||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||    
T  41997494 tactataaatatagactttgtatcagagtaaaccttgagataaagggggctgaaacaag 41997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 9148246 - 9148330
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||||  ||||||| |||| ||||||  |||||||||||||| ||||| ||||||| |||||||    
T  9148246 atacttttactataaatataggccttgtatcagagcaaactttgagagatagagggggctgaagcaagggtttagaaaggcaaca 9148330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 629
Target Start/End: Complemental strand, 9176807 - 9176738
Alignment:
Q  560 tttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||  |||| || |||| | |||||||||||||||||||||||| |||||||    
T  9176807 tttactataaatatagaccttgtatcaaagcaaacttggagatagagggggctgaaacaagggtttagaa 9176738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 14633316 - 14633396
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||||||  |||||||||||| | ||||||| |||||||    
T  14633316 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaaaggcaaca 14633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 320 - 389
Target Start/End: Complemental strand, 29609983 - 29609914
Alignment:
Q  320 tcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgct 389  Q
    ||||||||||||||||| |||||||||||||||||| |||    ||||| ||||||||||||||||||||    
T  29609983 tcaaaatttgatggatgaagaatattgttgctaaaagtattcttgatttttttcaaatatattttgtgct 29609914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 37089710 - 37089627
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaacctt---gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  |||||  ||||| |    |||||||||||||||||||||||| |||||||||||||||    
T  37089710 acttttactataaatatagaccttgtatcaggctaaacttgagagagatagagggggctgaaacaagggtttagaatggcaaca 37089627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 47868397 - 47868478
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| | ||||||||| ||||||||| |||| ||||||| |||||||    
T  47868397 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagagggctgaaagaagggtttagaaaggcaaca 47868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 629
Target Start/End: Complemental strand, 16932125 - 16932053
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||| |||||| |||||||    
T  16932125 acttttactataaatataaaccttgtatcaaagcaaactttgagatagagggggctgatacaagggtttagaa 16932053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 7941316 - 7941398
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||  ||||||| |||||  ||||  |||||||||||||||||||| ||||||| |||||||    
T  7941316 acttttactataaatatagacgttgtatcagagcaaaccgggagagatagagggggctgaaacaagggtttagaaaggcaaca 7941398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 448
Target Start/End: Complemental strand, 29609897 - 29609838
Alignment:
Q  389 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgc 448  Q
    |||||||||||||||| | | |||||||||||||||||||||||||| | ||||||||||    
T  29609897 tgaaaatatatttatgaagagtaaatatatttttgtaccgtatgaaggaagatttgatgc 29609838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 2485210 - 2485128
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatag-agggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| ||||| ||| |||||||| |||||||| ||||||| |||||||    
T  2485210 tactttcactataaatatagaccttgtatcagagcaaactttgagctagaagggggctaaaacaagggtttagaaaggcaaca 2485128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 31849937 - 31849855
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||| ||||||||  |||  ||||||| ||||   |||||||||||||||||||||||| ||||||| |||||||    
T  31849937 atacttttactagaaatataggtcttgtatcagagcaaactaggagatagagggggctgaaacaagggtttagaaaggcaaca 31849855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 5637807 - 5637721
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  || |||| |||| ||    |||||||||||||||||||||||  ||||||| |||||||    
T  5637807 atacttttactataaatatagaccttgtataagagcaaactttgagagagatagagggggctgaaacaagagtttagaaaggcaaca 5637721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 16453305 - 16453386
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||| |||||||||||| | ||  ||||||| |||||  |||||||||||||||||||||||| |||| || |||||||    
T  16453305 tacttttgctataaatataggctttgtatcagagcaaaccgagagatagagggggctgaaacaagggtttaaaaaggcaaca 16453386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 606
Target Start/End: Original strand, 25357614 - 25357683
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 606  Q
    ||||||| |||| |||  ||||||||||||||||||||||||||  |||| |||||||||||||| ||||    
T  25357614 gttccaattttacgagggatacttttactataaatatagaccttgtatcaaagtaaaccttgagagagag 25357683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 36921833 - 36921750
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaacctt--gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||| |||||||||||||||  |||||||||||| ||  ||||||||||||| ||||||||||  |||||| |||||||    
T  36921833 atacttttacaataaatatagaccttgtatcagagtaaactttgagagatagaggggg-tgaaacaagggcttagaaaggcaaca 36921750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 387
Target Start/End: Complemental strand, 54929267 - 54929198
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtg 387  Q
    ||||| |||||||||||||   | |||||||||||||||||||||||||||||| || |||| |||||||||    
T  54929267 tgacttaaaatttgatggaa--ataatattgttgctaaaaatataaaagatttgatttaaatgtattttgtg 54929198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 40999281 - 40999234
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagag 606  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||    
T  40999281 ttttactataaatataaaccttatatcagagtaaaccttgaggtagag 40999234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 637
Target Start/End: Original strand, 13543953 - 13544036
Alignment:
Q  559 ttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| |||  |||||| |||||| ||||||    |||||||||||||||||||||| ||||||| |||||    
T  13543953 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaaggatctagaatgacaaca 13544036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 14647214 - 14647172
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccg 428  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  14647214 tgctgaaaatatattcatggacaacaaatatatttttgtaccg 14647172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 12102088 - 12102161
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagataga-gggggctg-aaacaaggatttagaa 629  Q
    ||||||||||||||||||| |||  ||||||  ||||||||||||||| |||||||| |||||||| |||||||    
T  12102088 cttttactataaatatagatcttgtatcagataaaaccttgagatagaggggggctgaaaacaagggtttagaa 12102161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 38409194 - 38409282
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaacctt------gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||| |||| ||      |||||||||||||||||||||| | |||| || |||||||    
T  38409194 atacttttactataaatatagaccttgtatcagagcaaactttgagagggagatagagggggctgaaacaatggtttaaaaaggcaaca 38409282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 8631760 - 8631675
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||| ||  |||| || |||| ||    |||||||||||||||||||||||| ||||||| |||||||    
T  8631760 tactttcactataaatatagactttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 8631675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 6132871 - 6132949
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||| | |||||| |||||||||||| ||||| ||||||| || |||| |||||||    
T  6132871 cttttactataaatatagacattgtatcggtgtaaacattgagatagaggaggctg-aacaagggttcagaaaggcaaca 6132949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Complemental strand, 11006532 - 11006493
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  11006532 gagatagagggggctgaaacaagggtttagaaaggcaaca 11006493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Complemental strand, 11008861 - 11008822
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  11008861 gagatagagggggctgaaacaagggtttagaaaggcaaca 11008822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 18409681 - 18409603
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||  ||  ||||| ||||||  |||||||||| || ||||||||||| ||||||| |||||||    
T  18409681 cttttactataaatatagaatttgtatcagtgtaaacaatgagatagagagg-ctgaaacaagggtttagaaaggcaaca 18409603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 36380370 - 36380417
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    |||||||||||||||||| ||| ||  |||||||||||||||||||||    
T  36380370 tacttttactataaatatggactttgtatcagagtaaaccttgagata 36380417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 629
Target Start/End: Original strand, 16455283 - 16455356
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| |||| ||||||| | ||  ||||||| |||||  |||||| ||||||||||||||||| |||||||    
T  16455283 tacttttgctattaatataggctttgtatcagagcaaaccgagagataaagggggctgaaacaagggtttagaa 16455356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 558 - 606
Target Start/End: Complemental strand, 52043765 - 52043716
Alignment:
Q  558 cttttactataaatatagaccttaaatcaga-gtaaaccttgagatagag 606  Q
    |||||||||||||||||||||||  |||||| ||||||||||||| ||||    
T  52043765 cttttactataaatatagaccttgtatcagatgtaaaccttgagagagag 52043716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 591
Target Start/End: Complemental strand, 3824911 - 3824875
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagta 591  Q
    ||||||||||||||||||||||||||  |||||||||    
T  3824911 atacttttactataaatatagaccttgtatcagagta 3824875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 391 - 435
Target Start/End: Complemental strand, 5516747 - 5516703
Alignment:
Q  391 aaaatatatttatggacaataaatatatttttgtaccgtatgaag 435  Q
    ||||||||||||| || ||||||||||||||| || |||||||||    
T  5516747 aaaatatatttatagataataaatatatttttttatcgtatgaag 5516703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 37412716 - 37412384
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37412716 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 37412617  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37412616 acaataaatataattatgtaacgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattcttccactgaagg 37412517  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||          |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||     
T  37412516 agaaaaaaaaacgtatcttcagtgtgttattcgttccaaatttatgagttatatttttactataaatatagaccttgaatcagagtaaacctggagatat 37412417  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||| |||||||||||||||    
T  37412416 agggggctgaaacaagggtttagaatggcaaca 37412384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 21989853 - 21990183
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  21989853 tgttgtagtatgacccaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattgtgt--tgaaaatatatttatgg 21989950  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  21989951 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 21990050  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    ||           |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  21990051 aggaaaaaaaaacgtatcttctgtgtggtattcgttccaaatttatgagttataattttactataaatatagaccttgaatcagagtaaacctggagata 21990150  T
Q  604 gagggggctgaaacaaggatttagaatggcaaca 637  Q
    || ||||||||||||||| ||||||||| |||||    
T  21990151 ga-ggggctgaaacaagggtttagaatgacaaca 21990183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 7092768 - 7092431
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7092768 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaagatatatttatgg 7092669  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  7092668 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 7092569  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||||||| |||| ||    ||    
T  7092568 aggaaaaaaaattgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttactataaatatagaccttgtatcagagcaaactttgagaga 7092469  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||| |||||||||||||||||| ||||||||| |||||    
T  7092468 gatggagggggctgaaacaagggtttagaatgacaaca 7092431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 7095015 - 7094678
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7095015 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 7094916  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||    
T  7094915 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaaggaaatattatattttttatgcaaatattctttcactgaagg 7094816  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  ||||||| |||| ||    ||    
T  7094815 aggaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttattataaatatagaccttgtatcagagcaaactttgagaga 7094716  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| |||||||||||||||    
T  7094715 gatagagggggctgaaacaagggtttagaatggcaaca 7094678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 11756925 - 11757262
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11756925 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 11757024  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  11757025 acaataaatatatttttgtatcgtatgaagaactatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 11757124  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 600  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||    
T  11757125 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 11757224  T
Q  601 atagagggggctgaaacaa-ggatttagaatggcaaca 637  Q
    ||||||||||||||||||| || ||||||||| |||||    
T  11757225 atagagggggctgaaacaaggggtttagaatgacaaca 11757262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 304 - 637
Target Start/End: Original strand, 3035413 - 3035754
Alignment:
Q  304 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttat 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3035413 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttat 3035512  T
Q  404 ggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaa 503  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  3035513 ggacaataaatatatttttgtatcgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaa 3035612  T
Q  504 gg----agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt-- 597  Q
    ||    ||         ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      
T  3035613 ggagaaagaaaaaaaacgtatcttcagtatggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttga 3035712  T
Q  598 --gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
      |||||||||||||||||||||||| ||||||| |||||||    
T  3035713 gagagatagagggggctgaaacaagggtttagaaaggcaaca 3035754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 31156500 - 31156167
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31156500 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 31156401  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  31156400 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 31156301  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    ||           | ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||  ||||  | |||| ||||||||    
T  31156300 agaaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagctatacttttactataaatatagagcttgtatcaaggcaaactttgagata 31156201  T
Q  604 gagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| ||||||| |||||||    
T  31156200 gagggggctgaaacaagggtttagaaaggcaaca 31156167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 303 - 637
Target Start/End: Original strand, 18345234 - 18345574
Alignment:
Q  303 gagtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatattta 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18345234 gagtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaatatattta 18345333  T
Q  403 tggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactga 502  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  18345334 ttgacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaatggaatattatatttttgatgcaaatattctttcactga 18345433  T
Q  503 aggag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--- 597  Q
    |||||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  | ||| ||       
T  18345434 aggagaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctgaactttgag 18345533  T
Q  598 -gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
     ||||||||||||| |||||||||| ||||||| |||||||    
T  18345534 ggagatagagggggttgaaacaagggtttagaaaggcaaca 18345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 20299155 - 20299492
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20299155 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttgtgctgaaaatatatttatgg 20299254  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  20299255 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 20299354  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 600  Q
    ||          ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||    
T  20299355 agaaaaaaaaacgtatcttcagtgtggtatttgttccatatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 20299454  T
Q  601 atagagggggctgaaacaa-ggatttagaatggcaaca 637  Q
    ||||||||||||||||||| || ||||||||| |||||    
T  20299455 atagagggggctgaaacaaggggtttagaatgacaaca 20299492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 20625734 - 20626071
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20625734 tgttctagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 20625833  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  20625834 acaataaatatatttttgtatcgtatgaagaacgatttgatacaaatatattttgaaagggaatattatatttttgatgcaaatattttttcactgaagg 20625933  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  |||||| ||||| ||    ||    
T  20625934 agcaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttattataaatatagaccttctatcagactaaactttgagaga 20626033  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  20626034 gatagagggggctgaaacaagggtttagaaaggcaaca 20626071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 20629625 - 20629962
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20629625 tgttctagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 20629724  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  20629725 acaataaatatatttttgtatcgtatgaagaacgatttgatacaaatatattttgaaagggaatattatatttttgatgcaaatattttttcactgaagg 20629824  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  |||||| ||||| ||    ||    
T  20629825 agcaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttattataaatatagaccttctatcagactaaactttgagaga 20629924  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  20629925 gatagagggggctgaaacaagggtttagaaaggcaaca 20629962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 20642044 - 20642381
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20642044 tgttctagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 20642143  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  20642144 acaataaatatatttttgtatcgtatgaagaacgatttgatacaaatatattttgaaagggaatattatatttttgatgcaaatattttttcactgaagg 20642243  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  |||||| ||||| ||    ||    
T  20642244 agcaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttattataaatatagaccttctatcagactaaactttgagaga 20642343  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  20642344 gatagagggggctgaaacaagggtttagaaaggcaaca 20642381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 42331593 - 42331255
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42331593 tgttgtagtatgacttaaaatttgatgaatgaagaatattgttgctaaaaatataaaagatttgttttaaatatattttgtgctgaaaatatatttatgg 42331494  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  42331493 acaataagtatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 42331394  T
Q  506 ag-------nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttg 598  Q
    ||                ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| ||||| |||    
T  42331393 agaaagaaaaaaaaaaacgtatctttagtgtggtattcgttccaaatttatgagttatacttttactataaatatagactttgtatcagactaaactttg 42331294  T
Q  599 agatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  42331293 agatagagggggctgaaacaagggtttagaatgacaaca 42331255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 305 - 637
Target Start/End: Original strand, 38393682 - 38394019
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  38393682 gtgttgtagtatgattctaaatttgatggatggagaatattgttgctaaaaatatataagatttgtttcaaatatattttgtgctgaaaatttatttatg 38393781  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  38393782 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatgttatatttttgatgcaaatattctttcactgaag 38393881  T
Q  505 gag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    | |          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    ||    
T  38393882 gtgaaaaaataacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagaga 38393981  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  38393982 gatagagggggctgaaacaagggtttagaaaggcaaca 38394019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 306 - 629
Target Start/End: Complemental strand, 7472574 - 7472244
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7472574 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 7472475  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  7472474 acaataaatatattattgtatcatatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 7472375  T
Q  506 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----g 598  Q
    ||            ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||| ||||| ||    |    
T  7472374 agaaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatatgtttactataaatatagaccttgtatcagactaaactttgagag 7472275  T
Q  599 agatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||| |||||||    
T  7472274 agatagagggggctgaaacaagggtttagaa 7472244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 305 - 606
Target Start/End: Original strand, 1606170 - 1606472
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1606170 gtgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatg 1606269  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  1606270 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaag 1606369  T
Q  505 gag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    |||          | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| || |||| ||||||||    
T  1606370 gagaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaaagcaaactttgagata 1606469  T
Q  604 gag 606  Q
    |||    
T  1606470 gag 1606472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 7470621 - 7470278
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7470621 tgttgtagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaacatttgtttcaaatatattttgtgctgaaaatatatttatgg 7470522  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  7470521 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 7470422  T
Q  506 ag--------nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt 597  Q
    ||                 |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||| ||||| ||    
T  7470421 agaaaagaaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttactataaatatagaccttgtatcagactaaacttt 7470322  T
Q  598 ----gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
        |||||||||||||||||||||||| ||||||| |||||||    
T  7470321 gagagagatagagggggctgaaacaagggtttagaaaggcaaca 7470278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 28485261 - 28485599
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28485261 tgttgtagtatgattcaaaatttgatggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttgtgctgaaaatatatttatgg 28485360  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  28485361 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcaccgaagg 28485460  T
Q  506 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----g 598  Q
    ||            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |    
T  28485461 aggaaaaaaaacacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagag 28485560  T
Q  599 agatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||| |||| |||||||||| ||||||| |||||||    
T  28485561 agatagaaggggttgaaacaagggtttagaaaggcaaca 28485599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 306 - 629
Target Start/End: Original strand, 28487249 - 28487578
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28487249 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgcttcaaatatattttgtgctgaaaatatatttatgg 28487348  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  28487349 acaataaatataattttgtatcgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 28487448  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| |  |||||  ||||| ||    ||    
T  28487449 agaaaaaaaaaacgtatcttcagtgtggtatttgttctaaatttatgagttatacttttcctataaatatagaccatgtatcaggctaaactttgagaga 28487548  T
Q  600 gatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||| |||||||    
T  28487549 gatagagggggctgaaacaagggtttagaa 28487578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 306 - 580
Target Start/End: Original strand, 38395986 - 38396262
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38395986 tgttgtagtatgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgt 38396085  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  38396086 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 38396185  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 580  Q
    ||           |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38396186 agaaaaaaaaaacgtatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatatagacctt 38396262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 7352246 - 7351908
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7352246 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 7352147  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |    
T  7352146 acaataaatatatttttgtatcgcatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgaggcaaatattctttcactgaatg 7352047  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 598  Q
    ||          |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||  |||||  ||||| ||      |    
T  7352046 agaaaaaaaaacgtatcttcagtgtgatatttgttccaaatttatgagttatacttttactataaatataaaccttgtatcaggctaaactttgagagag 7351947  T
Q  599 agatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  7351946 agatagagggggctgaaacaagggtttagaaaggcaaca 7351908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 7349867 - 7349529
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7349867 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 7349768  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||| |    
T  7349767 acaataaatatatttttgtatcgcatgaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgaggcaaatattctttcactgaatg 7349668  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 598  Q
    ||          |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  7349667 agaaaaaaaaacgtatcttcagtgtgatatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 7349568  T
Q  599 agatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| || ||||||| |||||||    
T  7349567 agatagagggggctgaaacaggggtttagaaaggcaaca 7349529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 306 - 580
Target Start/End: Original strand, 1849665 - 1849941
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1849665 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 1849764  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  1849765 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcagatattctttcactgaagg 1849864  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 580  Q
    ||           | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1849865 agaaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagacctt 1849941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 306 - 574
Target Start/End: Complemental strand, 21470883 - 21470614
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21470883 tgttgtagtttgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 21470784  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  21470783 acaataaatatatttttatatcgtatgaagaacgatttgatgcgaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 21470684  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatata 574  Q
    ||          |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21470683 agaaaaaaaaacgtatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatata 21470614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 375 - 637
Target Start/End: Complemental strand, 13099996 - 13099732
Alignment:
Q  375 aatatattttgtgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattat 474  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13099996 aatatattttgtgctgaaaatatatttatggacaataaatatattttcgtaccgtatgaagaacgatttgatacaaatatattttgaaagggaatattat 13099897  T
Q  475 atgtttgatgcaaatattcttccactgaaggag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaata 572  Q
    || |||||||||||||||||| |||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13099896 atttttgatgcaaatattctttcactgaaggagaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaata 13099797  T
Q  573 tagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13099796 tagaccttgaatcaaagtaaaccttgagatagagggggttgaaacaagggtttagaatggcaaca 13099732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 306 - 506
Target Start/End: Original strand, 47865328 - 47865528
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47865328 tgttgtagtatgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 47865427  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  47865428 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 47865527  T
Q  506 a 506  Q
    |    
T  47865528 a 47865528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 314 - 637
Target Start/End: Original strand, 24258166 - 24258496
Alignment:
Q  314 tatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaa 413  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24258166 tatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaa 24258265  T
Q  414 tatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag------ 507  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||          
T  24258266 tatatttttgtacagtatgaaggacga-ttgatgcaaatatattttgaaagggaatattatatttttgatgtaaatattctttcactgaaggagaaaaaa 24258364  T
Q  508 -nnnnnnnnngtatcttca--gtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
              |||||||||  ||||| |||||||||||||||||||||||||| |||  ||||||||||||   ||  |||||||||||| |||||||||    
T  24258365 ataaagaaatgtatcttcagtgtgtgatattcgttccaaatttatgagttata-tttctctataaatataggttttgtatcagagtaaacattgagatag 24258463  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||| ||||||| |||||||    
T  24258464 agggggctgaaacaagggtttagaaaggcaaca 24258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 306 - 626
Target Start/End: Original strand, 3676997 - 3677301
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
T  3676997 tgttgtagtatgactcaaaatttgatagatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaa----------- 3677085  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  3677086 --------tatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 3677177  T
Q  506 ag----nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 601  Q
    ||             |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| ||| ||||||||||||| | ||||    
T  3677178 agagaaaaaaaaaacgtatcttcagtgtgatattcgttccaaatttatgagttatgtttttactataaatatagatcttgaatcagagtaaacttggaga 3677277  T
Q  602 tagagggggctgaaacaaggattta 626  Q
    |||| ||||||||||||||| ||||    
T  3677278 taga-ggggctgaaacaagggttta 3677301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 306 - 454
Target Start/End: Original strand, 443326 - 443474
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  443326 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 443425  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatat 454  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  443426 acaataaatatatttttgtaccgtctgaagaacaatttgatgcaaatat 443474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 386 - 606
Target Start/End: Complemental strand, 43254035 - 43253811
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgc 485  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43254035 tgctaaaaatatatttatggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgc 43253936  T
Q  486 aaatattcttccactgaaggag----nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctta 581  Q
    |||||||||| |||||||||||             |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  43253935 aaatattctttcactgaaggagaaaaaataagaaagtatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttg 43253836  T
Q  582 aatcagagtaaaccttgagatagag 606  Q
     |||||  ||||| |||||| ||||    
T  43253835 tatcaggctaaactttgagagagag 43253811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 410 - 637
Target Start/End: Original strand, 20297163 - 20297395
Alignment:
Q  410 taaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag-n 508  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||      
T  20297163 taaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcaccgaaggagaa 20297262  T
Q  509 nnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gagatag 604  Q
            ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| ||||||  |||||  ||||| ||    |||||||    
T  20297263 aaaaaaacgtatcttcagtgtggtatttgttccaaatttacgagttatacttttactaaaaatatggaccttgtatcaggctaaactttgagagagatag 20297362  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||| |||||||||||||||    
T  20297363 agggggctgaaacaagggtttagaatggcaaca 20297395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 309 - 472
Target Start/End: Complemental strand, 40281989 - 40281824
Alignment:
Q  309 tgtagtatgactcaaaatttgatggatggagaata--ttgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgga 406  Q
    |||||||||||||||||||||||||||| |||| |  |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  40281989 tgtagtatgactcaaaatttgatggatgaagaagaatttgttgctaaaaatataaaatatttgtttcaaatatattttgtgttgaaaatatatttatgga 40281890  T
Q  407 caataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
     |||||||||||||||||||||||||||  |  ||||||| |  ||||||||| ||| ||||||||    
T  40281889 aaataaatatatttttgtaccgtatgaaagaatatttgatacggatatatttttaaaaggaatatt 40281824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 517 - 637
Target Start/End: Original strand, 443508 - 443628
Alignment:
Q  517 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| |||    
T  443508 gtatcttcagtgtggaattcgttccaaatttatgagttatacttttactataaatatagactttgaatcagagtaaaccttgagatagagggagctaaaa 443607  T
Q  617 caaggatttagaatggcaaca 637  Q
    ||| | |||||||||||||||    
T  443608 caatggtttagaatggcaaca 443628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 537 - 629
Target Start/End: Original strand, 7188476 - 7188568
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| ||||||||  ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  7188476 gttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 7188568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 27306567 - 27306485
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  27306567 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 27306485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 316 - 472
Target Start/End: Original strand, 10690684 - 10690845
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatat------ttatggacaa 409  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||| | ||||||||||||||||||||||   || | ||      ||||| ||||    
T  10690684 tgactcaaaatttgatggagggagaagattgttgctaaaaatataaaag-tatgtttcaaatatattttgtgctttcaaaaaattgttgcttatgtacaa 10690782  T
Q  410 taaatatatttttgtaccgtatga-agaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    |||||||||||||||||| | ||| ||||  |||||||||||||||||||| ||| ||||||||    
T  10690783 taaatatatttttgtaccatgtgacagaa-tatttgatgcaaatatatttttaaaaggaatatt 10690845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 44515 - 44597
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  44515 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 44597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 537 - 616
Target Start/End: Complemental strand, 20091897 - 20091818
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    ||||||| ||||||||  ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  20091897 gttccaattttatgagggatacttttactataaatatagactttttatcagagtaaaccttgagatagagggggctgaaa 20091818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 555 - 626
Target Start/End: Original strand, 22392424 - 22392495
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 626  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||    
T  22392424 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggttta 22392495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 543 - 637
Target Start/End: Original strand, 11355197 - 11355291
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||| | ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  11355197 aatttatgagggattcttttactataaatataggctttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 11355291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 18567564 - 18567646
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  18567564 atacttttactataaatatagatcttgtatcagagtaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 18567646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 20137459 - 20137365
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||| | | ||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  20137459 aatttatgagggattcttttactataaatattggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 20137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 31435385 - 31435303
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  31435385 atacttttactataaatatagatcttgtatcagagtaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 31435303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 20297108 - 20297161
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttg 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20297108 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttg 20297161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 1049631 - 1049551
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  || |||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  1049631 acttttactataaatatagaccttgtattagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 1049551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 22251878 - 22251798
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||| |||||||    
T  22251878 acttttactataaatataaaccttgaatcagagtaaactttgagatagaggaggctgaaacaagagtttagaaaggcaaca 22251798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 545 - 637
Target Start/End: Complemental strand, 22828981 - 22828889
Alignment:
Q  545 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||  ||||||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  22828981 tttatgagggatacttttactataaatataggctttgtatccgagtaaaccttgagatagagggggctgaaacaagagtttagaaaggcaaca 22828889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 4296286 - 4296191
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaa-atcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||||| ||   ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  4296286 aatttatgagggatgcttttactataaatatagacatttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaatgacaaca 4296191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 21679981 - 21680060
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  || || ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  21679981 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 21680060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 621
Target Start/End: Original strand, 35580 - 35646
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 621  Q
    ||||||||||||||||||||||||||  ||||||| |||| ||||||||||||||||||||||||||    
T  35580 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagg 35646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 21678020 - 21678099
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||  ||  ||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  21678020 cttttactataaatatagatattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 21678099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 44724533 - 44724612
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||| |||||||| |||||| ||||||||||||||||| ||||||| |||||||    
T  44724533 cttttactataaatatagacattgtatcagtgtaaacctggagatatagggggctgaaacaagggtttagaaaggcaaca 44724612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 472
Target Start/End: Complemental strand, 12310608 - 12310442
Alignment:
Q  323 aaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg-----------------tgctgaaaatatatttatgg 405  Q
    |||||| ||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||                 |||||||| |||| ||| ||    
T  12310608 aaatttaatggatgaagaagattgttgctactgatataaaagatttgtttcaaatatattttgtgcttctagaagattgttgctgaaattatacttaagg 12310509  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    ||| | |||||||||||||||||||||||| | ||||||||| ||||||||||| ||| ||||||||    
T  12310508 acagttaatatatttttgtaccgtatgaaggaagatttgatgtaaatatatttttaaaaggaatatt 12310442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 26804524 - 26804602
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  26804524 atacttttactataaatatagaccttgt----gagtaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 26804602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 629
Target Start/End: Complemental strand, 30906405 - 30906313
Alignment:
Q  538 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aaacaaggatttagaa 629  Q
    |||||| |||||||   |||||||| |||||||||||||||||  || |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  30906405 ttccaattttatgatggatacttttgctataaatatagaccttgtataagagtaaatcttgagatagagggggctgaaaacaagaatttagaa 30906313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 42223110 - 42223190
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagataga-gggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| | ||  ||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||    
T  42223110 cttttactataaatataggctttgtatcagagtaaaccttgagatagatgtgggatgaaacaagggtttagaatggcaaca 42223190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 559 - 629
Target Start/End: Original strand, 24465503 - 24465574
Alignment:
Q  559 ttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||| |||||||| ||  |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  24465503 ttttactatagatatagactttgtatcagatgtaaaccttgagatagagggggctgaaacaagggtttagaa 24465574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 543 - 637
Target Start/End: Original strand, 9680753 - 9680852
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||||||||  |||||| |||||||||||||    ||||||||| |||||||||| ||||||| |||||||    
T  9680753 aatttatgagggatgcttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggttgaaacaagggtttagaagggcaaca 9680852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 558 - 628
Target Start/End: Complemental strand, 39146322 - 39146252
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttaga 628  Q
    ||||||||||||||||||||  |  ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  39146322 cttttactataaatatagacactgtatcagtgtaaaccttgagatggagggggctgaaacaagggtttaga 39146252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 314 - 360
Target Start/End: Complemental strand, 43254069 - 43254023
Alignment:
Q  314 tatgactcaaaatttgatggatggagaatattgttgctaaaaatata 360  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  43254069 tatgtctcaaaatttgatggatggagaatattgttgctaaaaatata 43254023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 629
Target Start/End: Original strand, 25542484 - 25542555
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||| | |||||||    
T  25542484 acttttactataaatatagaccttgtatcagagcaaactttgagataga-ggggctgaaacaaaggtttagaa 25542555  T

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Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 40837078 - 40836998
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||  | ||||| ||||||||||||| |||| ||||||| |||||||    
T  40837078 acttttactataaatatagaccttgtatcagagcaaatttggagattgagggggctgaaagaagggtttagaaaggcaaca 40836998  T

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Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 560 - 629
Target Start/End: Complemental strand, 24817682 - 24817613
Alignment:
Q  560 tttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||| ||||||||||||||||  |||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  24817682 tttaatataaatatagaccttgtatcagatgtaaaccttgagataga-ggggctgaaacaagggtttagaa 24817613  T

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Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 48457601 - 48457686
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  |||||  ||||| ||    |||||||||||||||||||||||| ||||||| |||||||    
T  48457601 tactttcactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 48457686  T

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Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 24748548 - 24748619
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||| ||||||||||||| ||  ||||| |||||| ||||  |||||||||||||||||||| |||||||    
T  24748548 cttttattataaatatagacattgtatcagtgtaaactttgacttagagggggctgaaacaagggtttagaa 24748619  T

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Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 25276095 - 25276174
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||  | ||  ||||||| |||| ||||||||||||||||| ||||||  |||||||| |||||||    
T  25276095 cttttactataaatatatgctttgtatcagagcaaactttgagatagagggggctaaaacaataatttagaaaggcaaca 25276174  T

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Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 637
Target Start/End: Original strand, 9679009 - 9679092
Alignment:
Q  559 ttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| |||  |||||| |||||| ||||||    |||||||||||||||||||||| ||||||| |||||    
T  9679009 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaaggatctagaatgacaaca 9679092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 629
Target Start/End: Original strand, 3878522 - 3878602
Alignment:
Q  555 atacttttactataaat----atagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||    |||||||||  ||||||| |||| ||||||  |||||||||||||||||||| |||||||    
T  3878522 atacttttactataaattaatatagaccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaa 3878602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 626
Target Start/End: Original strand, 6332177 - 6332248
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggct-gaaacaaggattta 626  Q
    |||||||||||||||||||| | |||  |||||||| |||||||||| |||||||||| ||||||||| ||||    
T  6332177 atacttttactataaatataaaacttgtatcagagt-aaccttgagagagagggggctggaaacaagggttta 6332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Original strand, 1849975 - 1850014
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  1849975 gagatagagggggctgaaacaagggtttagaaaggcaaca 1850014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 384
Target Start/End: Original strand, 6628853 - 6628884
Alignment:
Q  353 aaaatataaaagatttgtttcaaatatatttt 384  Q
    ||||||||||||||||||||||||||||||||    
T  6628853 aaaatataaaagatttgtttcaaatatatttt 6628884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 433
Target Start/End: Complemental strand, 12485023 - 12484976
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatga 433  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||||||    
T  12485023 tgctgaaaatatatttatggatagcaaatatatttttgtatcgtatga 12484976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 433
Target Start/End: Complemental strand, 12506454 - 12506407
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatga 433  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||||||    
T  12506454 tgctgaaaatatatttatggatagcaaatatatttttgtatcgtatga 12506407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 384
Target Start/End: Complemental strand, 12657698 - 12657667
Alignment:
Q  353 aaaatataaaagatttgtttcaaatatatttt 384  Q
    ||||||||||||||||||||||||||||||||    
T  12657698 aaaatataaaagatttgtttcaaatatatttt 12657667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 353 - 383
Target Start/End: Complemental strand, 12485074 - 12485044
Alignment:
Q  353 aaaatataaaagatttgtttcaaatatattt 383  Q
    |||||||||||||||||||||||||||||||    
T  12485074 aaaatataaaagatttgtttcaaatatattt 12485044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 353 - 383
Target Start/End: Complemental strand, 12506505 - 12506475
Alignment:
Q  353 aaaatataaaagatttgtttcaaatatattt 383  Q
    |||||||||||||||||||||||||||||||    
T  12506505 aaaatataaaagatttgtttcaaatatattt 12506475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 583 - 629
Target Start/End: Complemental strand, 21592453 - 21592407
Alignment:
Q  583 atcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||| |||||| |||||||||||||||||||||||| | |||||||    
T  21592453 atcagtgtaaactttgagatagagggggctgaaacaaaggtttagaa 21592407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 246; Significance: 1e-136; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 303 - 637
Target Start/End: Original strand, 26097418 - 26097756
Alignment:
Q  303 gagtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatattta 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  26097418 gagtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttgtactgaaaatatattta 26097517  T
Q  403 tggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttga--aagggaatattatatgtttgatgcaaatattcttccact 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||||| |||||||||||||||||| ||||    
T  26097518 tggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaagaaggaaatgttatatttttgatgcaaatattctttcact 26097617  T
Q  501 gaaggag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttg 598  Q
    |||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  26097618 gaaggaggaaaaaaaaatgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaactttg 26097717  T
Q  599 agatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| || | |||||||||||||||    
T  26097718 agatagagggggctgaaataaaggtttagaatggcaaca 26097756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 26098841 - 26098507
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26098841 tgttgtagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 26098742  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| || ||||||    
T  26098741 acaataaatatatttttgtaccgtataaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatacaaaaattctttcattgaagg 26098642  T
Q  506 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagat 602  Q
    ||            ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  26098641 agaaataaaaaaacgtatcttcaatgtggtattcgttccaattttatgagttatacttttactataaatatagaccttgaatcagagtaaacctggagat 26098542  T
Q  603 agagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||| |||| |||||||||||||||    
T  26098541 agagggggctgaaataagggtttagaatggcaaca 26098507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 18468698 - 18469034
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18468698 tgttgtagtatgactcaaaatttgatggatggagaatatttttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 18468797  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  18468798 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 18468897  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 600  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||   ||||| ||    |||    
T  18468898 agaaaataaaaagtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcatgataaactttgagagag 18468997  T
Q  601 atagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  18468998 atagagggggctgaaacaagggtttagaaaggcaaca 18469034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 308 - 637
Target Start/End: Complemental strand, 18511800 - 18511468
Alignment:
Q  308 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggac 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18511800 ttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcgaatatattttgtgctgaaaatatatttatggac 18511701  T
Q  408 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  18511700 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaaggaaatattatatttttgatgcaaatattctttcactgaaggag 18511601  T
Q  508 -nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagatag 604  Q
              ||||||| |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  |||||| ||||| ||  |||||||    
T  18511600 aaaaaaaaacgtatctttagtgtggtattcgttccaaatttatgagttatatgtttaatataaatatagaccttgtatcagactaaactttgagagatag 18511501  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||| ||||||||| |||||    
T  18511500 agggggctgaaacaagggtttagaatgacaaca 18511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 27912219 - 27912559
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27912219 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 27912318  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27912319 acaataaatatatttttgtatcgtatgaaaaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 27912418  T
Q  506 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----- 597  Q
    ||            |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||         
T  27912419 agaaaaaaaaaaacgtatcttcagtgtgatatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagag 27912518  T
Q  598 -gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
     ||||||||||| |||||||||||| ||||||| |||||||    
T  27912519 agagatagagggtgctgaaacaagggtttagaaaggcaaca 27912559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 309 - 637
Target Start/End: Complemental strand, 18509904 - 18509574
Alignment:
Q  309 tgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggaca 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  18509904 tgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcgaatatattttgtgctgaaaatatatttatggaca 18509805  T
Q  409 ataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag- 507  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||     
T  18509804 ataaatatatttttgtaccgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaggaga 18509705  T
Q  508 nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagag- 606  Q
             |||||||||||||||||||| | ||||||||||||||||||  |||||||||||||||||||||  |||||| ||||| |||||| | ||     
T  18509704 aaaaaaaacgtatcttcagtgtggtattcatcccaaatttatgagttatatgtttactataaatatagaccttgtatcagactaaactttgagagataga 18509605  T
Q  607 ggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||| ||||||||| |||||    
T  18509604 ggggctgaaacaagggtttagaatgacaaca 18509574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 306 - 580
Target Start/End: Original strand, 25803707 - 25803982
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25803707 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 25803806  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  25803807 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 25803906  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 580  Q
    ||          |||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25803907 agaaaaaaaaacgtatcttcagtgtaatatttgttccaaatttatgagttatacttttactataaatatagacctt 25803982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 306 - 606
Target Start/End: Original strand, 27910135 - 27910437
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27910135 tgttgtagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 27910234  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27910235 acaataaatatatttttgtattgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 27910334  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    ||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| |    
T  27910335 agaaaaaaaaaaagtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggttaaactttgagaga 27910434  T
Q  604 gag 606  Q
    |||    
T  27910435 gag 27910437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 306 - 602
Target Start/End: Complemental strand, 3373630 - 3373332
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3373630 tgttgtagtatgactcagaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 3373531  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  3373530 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattttttcactgaagg 3373431  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagat 602  Q
    ||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| || |||| |||||||    
T  3373430 agaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaaagcaaactttgagat 3373332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 326 - 637
Target Start/End: Original strand, 10586549 - 10586865
Alignment:
Q  326 tttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaatatatttttgta 425  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10586549 tttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaatatatttttgta 10586648  T
Q  426 ccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag--nnnnnnnnngtatctt 523  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||           |||||||    
T  10586649 tcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaggagaaaaaaaaaacgtatctt 10586748  T
Q  524 cagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga---gggggctgaaacaag 620  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| |||    ||||||||||||||    
T  10586749 cagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaag 10586848  T
Q  621 gatttagaatggcaaca 637  Q
    | |||||||||||||||    
T  10586849 ggtttagaatggcaaca 10586865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 306 - 621
Target Start/End: Original strand, 18596326 - 18596654
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18596326 tgttgtactatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaaaatatatttatgg 18596425  T
Q  406 aca-----------ataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattct 494  Q
    |||           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  18596426 acaataaatataccataaatatatttttgtaccgtataaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgatacaaatattct 18596525  T
Q  495 tccactgaaggag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaa 592  Q
      |||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18596526 atcactgaaggagaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaa 18596625  T
Q  593 accttgagatagagggggctgaaacaagg 621  Q
    |||||| ||||||||||||||||||||||    
T  18596626 accttgggatagagggggctgaaacaagg 18596654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 305 - 606
Target Start/End: Original strand, 15551924 - 15552227
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  15551924 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaagatatatttatg 15552023  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||| ||||||||    
T  15552024 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatatgacatttttgatgcaaatattctttcactgaag 15552123  T
Q  505 gag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagat 602  Q
    |||           |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||||||     
T  15552124 gagaaaaaaaaaacgtatcttcagcgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagag 15552223  T
Q  603 agag 606  Q
    ||||    
T  15552224 agag 15552227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 306 - 489
Target Start/End: Original strand, 21288529 - 21288713
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  21288529 tgttgtagtataactcaaaatttgatggatggagaatattgttgctaaaaataaaaaagatttgtttaaaatatattttgtgctgaaaatatatttatgg 21288628  T
Q  406 acaataaatatatttt-tgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaat 489  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  21288629 acaataaatatattttcggtaccgtatgaagaacgattttatgcaaatatattttgaaagggaatattatatttttgatgcaaat 21288713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 386 - 637
Target Start/End: Original strand, 18466453 - 18466707
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgc 485  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18466453 tgctaaaaatatatttatggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgc 18466552  T
Q  486 aaatattcttccactgaaggagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatc 585  Q
    |||||||||| |||| ||||||         ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||    
T  18466553 aaatattctttcactaaaggag-aaaaaaaagtatcttcagtgtggtatttgttccaaatttatgagttatatttttactataaatatagaccttgtatc 18466651  T
Q  586 agagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||  ||||| ||    |||||||||||||||||||||||| ||||||| |||||||    
T  18466652 aggctaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 18466707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 313 - 458
Target Start/End: Complemental strand, 17415893 - 17415748
Alignment:
Q  313 gtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataa 412  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17415893 gtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttttgctgaaaatatatttatggacaataa 17415794  T
Q  413 atatatttttgtaccgtatgaagaacgatttgatgcaaatatattt 458  Q
    |||||||||||||| |||||||| |  |||||||||||||||||||    
T  17415793 atatatttttgtactgtatgaaggaaaatttgatgcaaatatattt 17415748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 439 - 637
Target Start/End: Original strand, 40221340 - 40221545
Alignment:
Q  439 gatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggagnnnnnnnnn---------gtatcttcagtgt 529  Q
    |||||| | |||||||||||||||| |||||||||||| |||||||||||||||||| ||||| |||||                  |||||||||||||    
T  40221340 gatttgtttcaaatatattttgaaaaggaatattatatttttgatgcaaatattctttcactgcaggagaaggaaaaaacaaaaaacgtatcttcagtgt 40221439  T
Q  530 ggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    | ||| ||||| ||||||||||||||  |||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||| |||||||    
T  40221440 gatatccgttctaaatttatgagtta--cttttactataaatatagacattgactcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 40221537  T
Q  630 tggcaaca 637  Q
    ||||||||    
T  40221538 tggcaaca 40221545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 306 - 410
Target Start/End: Complemental strand, 6662033 - 6661929
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  6662033 tgttgtagtatgacttaaaacttgatggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttgtgttgaaaatatatttatgg 6661934  T
Q  406 acaat 410  Q
    |||||    
T  6661933 acaat 6661929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 517 - 630
Target Start/End: Complemental strand, 41586082 - 41585969
Alignment:
Q  517 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||   ||  ||||||||||||||||||||| ||||||||||||    
T  41586082 gtatcttcagtctggtattcgttccaaatctatgagttatacttttactataaatataggttttgtatcagagtaaaccttgagataaagggggctgaaa 41585983  T
Q  617 caaggatttagaat 630  Q
    ||||| ||||||||    
T  41585982 caagggtttagaat 41585969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 386 - 601
Target Start/End: Original strand, 15143262 - 15143475
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgc 485  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||       ||||||||    
T  15143262 tgctaaaaatatatttatggacaataaatacatttttgtaccatatgaaggaagatttgatgcaaatatattttgaaagggaata-------tttgatgc 15143354  T
Q  486 aaatattcttccactgaa-----ggagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 580  Q
    |||||||||| |||||||     |||          |||||||||| ||| ||| |||| ||||||||||||||||| |||  |||||||||||||||||    
T  15143355 aaatattctttcactgaagaaggggaaaaaagaaacgtatcttcagcgtgatatccgttacaaatttatgagttata-tttctctataaatatagacctt 15143453  T
Q  581 aaatcaga-gtaaaccttgaga 601  Q
      |||||| |||||||||||||    
T  15143454 gtatcagatgtaaaccttgaga 15143475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 306 - 385
Target Start/End: Original strand, 40221282 - 40221361
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg 385  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40221282 tgttgtagtatgactcaaaatttaattgatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg 40221361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 555 - 631
Target Start/End: Complemental strand, 36402666 - 36402590
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatg 631  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  36402666 atacttttactataaatatagaccttatatcagagtaaacgttgagatagagggggctgaaacaagggtttagaatg 36402590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 519 - 629
Target Start/End: Complemental strand, 6661555 - 6661446
Alignment:
Q  519 atcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaaca 618  Q
    |||||||||||  ||| |||| ||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||    
T  6661555 atcttcagtgttatatccgtttcaaatttatgagttata-tttcactataaatatagaccttgtatcagagtaaaccttgagatagagagggttgaaaca 6661457  T
Q  619 aggatttagaa 629  Q
    ||| |||||||    
T  6661456 agggtttagaa 6661446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 2818674 - 2818600
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||    
T  2818674 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 2818600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 12556261 - 12556179
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||    
T  12556261 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaataagggtttagaatgacaaca 12556179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 20507800 - 20507718
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  20507800 atacttttactataaatatagatcttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 20507718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 306 - 360
Target Start/End: Original strand, 18466411 - 18466465
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18466411 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 18466465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 25921811 - 25921737
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| |||||||    
T  25921811 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 25921737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 5779217 - 5779144
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgct 389  Q
    ||||| |||||||||| |||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  5779217 tgacttaaaatttgatagatgaagaagattattgctaaaaatataaaagatttgtttcaaatatattttgtgct 5779144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 561 - 637
Target Start/End: Complemental strand, 10474655 - 10474579
Alignment:
Q  561 ttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||| ||  ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  10474655 ttactataaatatagacattgtatcagtgtaaaccttgaaatagagggggctgaaacaaggatttagaaaggcaaca 10474579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 31542678 - 31542758
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  |||| || |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  31542678 acttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 31542758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 36208524 - 36208596
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aaacaaggatttagaa 629  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  36208524 cttttactataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaaacaagggtttagaa 36208596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 17072827 - 17072898
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17072827 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 17072898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 25904047 - 25904118
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  25904047 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 25904118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 34531001 - 34530930
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||  |||||||    
T  34531001 cttttactgtaaatatagactttgaatcagagtaaaccttgagatagagggggctgaaacaagtgtttagaa 34530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 306 - 360
Target Start/End: Original strand, 15143220 - 15143274
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 360  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15143220 tgttatagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 15143274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 565 - 637
Target Start/End: Original strand, 21288715 - 21288787
Alignment:
Q  565 tataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||| |||||||| ||||||    
T  21288715 tataaatatagaccttgaattagagtaaaccttgagatagagggggttgaaataagggtttagaatagcaaca 21288787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 31545023 - 31545103
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  |||| || |||| |||||||| ||||||||||||||||| ||||||| |||||||    
T  31545023 acttttactataaatatagaccttgtatcaaagcaaactttgagataaagggggctgaaacaagggtttagaaaggcaaca 31545103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 24126800 - 24126871
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||  |||||||    
T  24126800 cttttactataaatatagacattatatcagtgtaaaccttgagatagatggggctgaaacaagagtttagaa 24126871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 4236570 - 4236652
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||| |||| | |||||| ||||||||||||||||  ||||||| |||||||    
T  4236570 atacttttactataaatatagaccttgtatcagagcaaacttggagataaagggggctgaaacaagagtttagaaaggcaaca 4236652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 629
Target Start/End: Original strand, 21947968 - 21948041
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  |||||||||||  |||||||||| ||||||||||||||| |||||||    
T  21947968 atacttttactataaatatagaccttgtatcagagtaaattttgagataga-ggggctgaaacaagggtttagaa 21948041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 31472963 - 31472869
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||| ||| ||  || || |||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  31472963 aatttatgagggatgcttttactataaatatggacattgtattagtgtaaaccttgagatagagggggctaaaacaagggtttagaaaggcaaca 31472869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 10529436 - 10529355
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| ||||||||||| ||| |||||||||| ||||||| |||||||    
T  10529436 tactttcactataaatatagaccttgtatcagagcaaactttgagatagagtgggttgaaacaagggtttagaaaggcaaca 10529355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 38882048 - 38882129
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagataga-gggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||| |||||||||||||||| ||||||| |||||||    
T  38882048 acttttactataaatatagaccttgtatcagagcaaacttggagatagaggggggctgaaacaagggtttagaaaggcaaca 38882129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 39854426 - 39854506
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  39854426 tactttcactataaatatagaccttgtatcagagcaaactttgagataga-ggggctgaaacaagggtttagaaaggcaaca 39854506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 31179707 - 31179627
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||  |||| || |||| ||||||||||||| |||||||||||| ||||||| |||||||    
T  31179707 acttttactataaatatagacattgtatcaaagcaaactttgagatagagggagctgaaacaagggtttagaaaggcaaca 31179627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 636
Target Start/End: Complemental strand, 37706117 - 37706037
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaac 636  Q
    ||||||| |||||||||||||| ||  ||||| |||||||||||||||||||||||||||| || | ||||||| ||||||    
T  37706117 tacttttgctataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaataaaggtttagaaaggcaac 37706037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 2174863 - 2174942
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||| || ||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  2174863 cttttactataaatacaggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 2174942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 538 - 637
Target Start/End: Original strand, 6756419 - 6756517
Alignment:
Q  538 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||| | ||||||||||||||||| |||||||| |||  |||| | ||||| ||||||||||||| |||||||||| | ||||||| |||||||    
T  6756419 ttccaaattt-taagttatacttttactattaatatagatcttgtatcatattaaactttgagatagagggagctgaaacaatggtttagaaaggcaaca 6756517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 16776098 - 16776181
Alignment:
Q  555 atacttttactataaa-tatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||| ||||||||||  ||| ||| |||| |||||||||||||||||||||||||| |||| || |||||||    
T  16776098 atacttttactataaaatatagaccttgtatctgagcaaactttgagatagagggggctgaaacaagggtttacaaaggcaaca 16776181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 20042994 - 20043073
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| | ||  |||| || ||||||||||||||||||||||||||||||  ||||||| |||||||    
T  20042994 cttttactataaatataggctttgtatcatagcaaaccttgagatagagggggctgaaacaagtgtttagaaaggcaaca 20043073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 558 - 627
Target Start/End: Original strand, 20044954 - 20045023
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttag 627  Q
    |||||||||||||||||| | ||  ||||||| ||||||||||| ||||||||||||||||||| |||||    
T  20044954 cttttactataaatataggctttgtatcagagcaaaccttgagacagagggggctgaaacaagggtttag 20045023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 4409999 - 4410084
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| ||||||    |||||||||||||||||||| ||||||| |||||||    
T  4409999 tactttcactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 4410084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 695833 - 695912
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||| ||||||||| ||  || || ||||||||||||||| |||||| |||||||||| ||||||| |||||||    
T  695833 cttttactatgaatatagacattgtatgagtgtaaaccttgagataaagggggatgaaacaagggtttagaaaggcaaca 695912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 1189949 - 1189865
Alignment:
Q  558 cttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||  |||||| |||||||||||||    |||||||||||||||||||  ||||||| |||||||    
T  1189949 cttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggctgaaacaagagtttagaaaggcaaca 1189865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 537 - 616
Target Start/End: Original strand, 42770697 - 42770775
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    ||||||| ||||||||  |||||||||||||||||||| || ||  ||| ||||||||||||||||||||||| ||||||    
T  42770697 gttccaattttatgagggatacttttactataaatataaactttgtatc-gagtaaaccttgagatagaggggactgaaa 42770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 619
Target Start/End: Complemental strand, 31466314 - 31466252
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaa 619  Q
    ||||||||||||||||||||||||  |||||| ||||| |||||||| | |||||||||||||    
T  31466314 acttttactataaatatagaccttgtatcagactaaactttgagataaaaggggctgaaacaa 31466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 32520241 - 32520316
Alignment:
Q  386 tgctgaaaatatatttatggacaataaa--tatatttttgtaccgtatgaagaacgatttgatgcaaatatatttt 459  Q
    ||||||||||||||||||| | | ||||  ||||||||||||||||| ||||||  |||||||||||| |||||||    
T  32520241 tgctgaaaatatatttatgtagagtaaaaatatatttttgtaccgtacgaagaaaaatttgatgcaaacatatttt 32520316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 39398327 - 39398249
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||| || ||  | | | ||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  39398327 cttttactataaatataaacattgtaccggtgtaaaccttgagatagagggg-ctgaaacaagggtttagaaaggcaaca 39398249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 558 - 608
Target Start/End: Original strand, 2723911 - 2723961
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagaggg 608  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||    
T  2723911 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaggg 2723961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 17818826 - 17818746
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||  ||||||||||||| ||  ||||| ||||||||||||| ||| ||||||||||||||  ||||||| |||||||    
T  17818826 tacttttgttataaatatagacattgtatcagtgtaaaccttgagaaaga-ggggctgaaacaagagtttagaaaggcaaca 17818746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 606
Target Start/End: Complemental strand, 2144930 - 2144878
Alignment:
Q  555 atacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagag 606  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||| ||||    
T  2144930 atacttttactataaatatagaccttgtatcagatgtaaaccttgagagagag 2144878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Original strand, 25804009 - 25804048
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  25804009 gagatagagggggctcaaacaagggtttagaatggcaaca 25804048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Complemental strand, 34477349 - 34477310
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  34477349 gagatagagggggctgaaacaagggtttagaaaggcaaca 34477310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Complemental strand, 34479714 - 34479675
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  34479714 gagatagagggggctgaaacaagggtttagaaaggcaaca 34479675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 353 - 387
Target Start/End: Complemental strand, 2532784 - 2532750
Alignment:
Q  353 aaaatataaaagatttgtttcaaatatattttgtg 387  Q
    ||||||||||||||||||||||||||||| |||||    
T  2532784 aaaatataaaagatttgtttcaaatatatcttgtg 2532750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 472
Target Start/End: Complemental strand, 6661648 - 6661594
Alignment:
Q  418 tttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    ||||||||| | |||||| | ||||||| | ||||||||||||||||||||||||    
T  6661648 tttttgtactgaatgaaggaagatttgaagtaaatatattttgaaagggaatatt 6661594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 606
Target Start/End: Original strand, 4897638 - 4897710
Alignment:
Q  539 tccaaatttatgagttatacttttactataaata-----tagaccttaaatcagagtaaaccttgagatagag 606  Q
    ||||| ||||||||  ||||||||||||||||||     ||||||||  ||||||||||||||||||| ||||    
T  4897638 tccaattttatgagggatacttttactataaataatatatagaccttgcatcagagtaaaccttgagagagag 4897710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 245; Significance: 1e-135; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 51709 - 52043
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51709 tgttgtagtatgactcaaaatttgatggatggagaataatgttgctaaaaatataaaagatttgtttcaaatatattttgtggtgaaaatatatttatgg 51808  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  51809 acaataaatatatttttgtaccgtataaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 51908  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagat 602  Q
    ||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||| ||  |||||    
T  51909 agaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgtatcatactaaactttgagagat 52008  T
Q  603 agagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||| |||||||||||||||    
T  52009 agagggggctgaaacaagggtttagaatggcaaca 52043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 50159 - 50230
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaat 377  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  50159 tgttgtagtatgactcaaaatttgatggatgaagaataatgttgctaaaaatataaaagatttgtttcaaat 50230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 183976 - 183896
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||||||  |||||||||||| | ||||||| |||||||    
T  183976 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaaaggcaaca 183896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 170076 - 170118
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccg 428  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  170076 tgctgaaaatatattcatggacaacaaatatatttttgtaccg 170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 305 - 637
Target Start/End: Complemental strand, 42924095 - 42923765
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42924095 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 42923996  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||    
T  42923995 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaaagaaatattatatttttgatgcaaatattctttcactgaag 42923896  T
Q  505 gagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagat 602  Q
    |||         |||||||||    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  |||||    
T  42923895 gagaacaaataagtatcttca----ggtgttcgttccaaatttatgagttatacttttactataaatatagaccttgaatcatagtaaaccttgagagat 42923800  T
Q  603 agagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||| ||||||||||||| |||||||||||||||    
T  42923799 agaggaggctgaaacaagggtttagaatggcaaca 42923765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 42452449 - 42452782
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42452449 tgttgtagtatgacttaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 42452548  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  42452549 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 42452648  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    ||           |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||  ||||||| |||| | ||||||    
T  42452649 agaaaaaaaaaatgtatcttcggtgtggtatttgttccaaatttatgagttatacttttattataaatatagacattgtatcagagcaaacttggagata 42452748  T
Q  604 gagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| ||||||| |||||||    
T  42452749 gagggggctgaaacaagggtttagaaaggcaaca 42452782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 23452829 - 23452493
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  23452829 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttatgctgaaaataaatttatgg 23452730  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  23452729 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 23452630  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 600  Q
    ||          ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||    
T  23452629 agaaaaaaaaaagtaccttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 23452530  T
Q  601 atagagggggctgaaacaaggatttagaatggcaaca 637  Q
    | ||||||||||||||||||| ||||||| |||||||    
T  23452529 acagagggggctgaaacaagggtttagaaaggcaaca 23452493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 306 - 606
Target Start/End: Complemental strand, 35216184 - 35215883
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35216184 tgttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 35216085  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  35216084 acaataaatatatttttgtatcgtataaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcagatattctttcactgaagg 35215985  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||          | |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| ||    
T  35215984 agaaaaaaaaatgaatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 35215885  T
Q  605 ag 606  Q
    ||    
T  35215884 ag 35215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 306 - 580
Target Start/End: Complemental strand, 35218565 - 35218290
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35218565 tgttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 35218466  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  35218465 acaataaatatatttttgtatcgtataaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaagg 35218366  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 580  Q
    ||          | ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  35218365 agaaaaaaaaacgaatcttcagtgtggtatttgctccaaatttatgagttatacttttactataaatatagacctt 35218290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 306 - 576
Target Start/End: Complemental strand, 27583907 - 27583643
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  27583907 tgttgtagtatgactcaaattttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaagatatatttatga 27583808  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||| |||| ||||||| |  |||||||||||||||||||||||| ||||||       |||||||||||||||||| |||||||||    
T  27583807 acaataaatatatttttataccatatgaaggaatatttgatgcaaatatattttgaaaaggaata-------tttgatgcaaatattctttcactgaagg 27583715  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatataga 576  Q
    ||           |||||||||| ||| ||| |||||||||||||||||||||| |||  |||||||||||||    
T  27583714 agaaaaaagaaatgtatcttcagcgtgatatccgttccaaatttatgagttata-tttctctataaatataga 27583643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 28568740 - 28568584
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaata 415  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  28568740 tgactcaaaatttgatagatgaagaatattgttgctaaaactataaaagatttgtttcaaatatattttgttttgaaaatatatttatggacaataaata 28568641  T
Q  416 tatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||    
T  28568640 tatttttgtatcgtgtgaaggaagatttgatgcaaatatattttgaaagggaatatt 28568584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 306 - 435
Target Start/End: Complemental strand, 27136505 - 27136368
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat--------at 397  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||        ||    
T  27136505 tgttgtagtatgactcaaaatttgatggatgaagaatattggtgctaaaaatataaaagatttgtttcaaatatattttgtgttgaaaatatataaatat 27136406  T
Q  398 atttatggacaataaatatatttttgtaccgtatgaag 435  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  27136405 atttatggaaaataaatatatttttgtaccgtatgaag 27136368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 316 - 472
Target Start/End: Original strand, 15693583 - 15693755
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgct-----------------gaaaatata 398  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||                 |||||||||    
T  15693583 tgacttaaaatttgatggatgaataatattgttgctaaaaatataaa-gatttgtttcaaatatattttgtgcttccaaaaacttgttgctgaaaatata 15693681  T
Q  399 tttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    ||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||    
T  15693682 tttatgggcaataaatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttaaaggggatatt 15693755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 313 - 401
Target Start/End: Complemental strand, 34575696 - 34575608
Alignment:
Q  313 gtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatattt 401  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  34575696 gtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgttctaaatatattttgtgctgaaaatatattt 34575608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 40032396 - 40032314
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  40032396 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 40032314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 316 - 464
Target Start/End: Complemental strand, 41303623 - 41303457
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaa-tataaaagatttgtttcaaatatattttg-----------------tgctgaaaatat 397  Q
    ||||||| ||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||                 ||||||||||||    
T  41303623 tgactcagaatttgatggatgaagaagattgttgctaaaaaatataaaagatttgtttcaaatatattttgtgcttccataagattgttgctgaaaatat 41303524  T
Q  398 atttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaag 464  Q
    ||||||||||| |||||||| ||||||||||| ||||| | || ||||| |||||||||||| ||||    
T  41303523 atttatggacagtaaatataattttgtaccgtgtgaaggaagaattgattcaaatatatttttaaag 41303457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 28568346 - 28568411
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatat 381  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  28568346 tgactcaaaatttgatggatgaagaatattgttgttaaaaatataaaagatttgtttcaaatatat 28568411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 24162548 - 24162468
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  24162548 acttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 24162468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 37963283 - 37963191
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| |||||||   ||||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  37963283 gttccaattttatgatggatacttttactataaatatagactttgtataagagtaaaccttgagatagagggggctgaaacaagggtttagaa 37963191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 22163282 - 22163203
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  22163282 cttttactataaatatagacattgtatcagtgtaaactttgagatagagggggctgaaacaaggatttagaaaggcaaca 22163203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 31733115 - 31733021
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||||| ||  | |||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  31733115 aatttatgagggatgcttttactataaatatagactttgtaacagagtaaacattgagatagagggggctgaaacaagggtttagaaaggcaaca 31733021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 13910380 - 13910300
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  13910380 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 13910300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 19504681 - 19504601
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  19504681 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 19504601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 27104718 - 27104798
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| || |||| |||||||    
T  27104718 acttttactataaatatagaccttgtatcagagaaaactttgagatagagggggctgaaacaagggttcagaaaggcaaca 27104798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 11578439 - 11578368
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||||| |||||||    
T  11578439 cttttactataaatatagaccttatatcagggtaaatcttgagatagagtgggctgaaacaagggtttagaa 11578368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 19007560 - 19007639
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| | ||  |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  19007560 cttttactataaatataggctttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 19007639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 386 - 457
Target Start/End: Original strand, 39286971 - 39287042
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatatt 457  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||||||||||||    
T  39286971 tgcttaaaatatatttatggacaataaatatatttttgtaccatatgaatgaagatttgatgcaaatatatt 39287042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 559 - 637
Target Start/End: Complemental strand, 6264479 - 6264401
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||| | ||||||| |||||||    
T  6264479 ttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaaaggtttagaaaggcaaca 6264401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 543 - 629
Target Start/End: Original strand, 17849022 - 17849108
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||  || ||||||||||||||||| || ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17849022 aatttatgagggatgcttttactataaatataaacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 17849108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 22287674 - 22287592
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  || | ||||||| |||||||| ||||||||||||||||| ||||||| |||||||    
T  22287674 atacttttactataaatatagaccttgtattaaagtaaactttgagatatagggggctgaaacaagggtttagaaaggcaaca 22287592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 22407747 - 22407665
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||||||||  ||||||| |||| |||||||||||| ||||||| |||||||    
T  22407747 atacttttactataaatatagaccttgtatcagagtaaactgtgagatatagggtgctgaaacaagggtttagaaaggcaaca 22407665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 42064432 - 42064514
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||| |||| | ||||||||||| |||||||||||| ||||||| |||||||    
T  42064432 atacttttactataaatatagaccttgtatcagagcaaacttggagatagagggagctgaaacaagggtttagaaaggcaaca 42064514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 555 - 619
Target Start/End: Complemental strand, 12342748 - 12342684
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaa 619  Q
    |||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||    
T  12342748 atacttttactataaatatacacattgtatcagagtaaaccttgagatagagggggctgaaacaa 12342684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 7502638 - 7502723
Alignment:
Q  387 gctgaaaatatatttatggacaataaatatatttttgtaccgtatga-agaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    |||||||||||||||||| |||||||| |||||||||||  |||||| |||| ||||||||||||||||||||| ||||| ||||||    
T  7502638 gctgaaaatatatttatgaacaataaaaatatttttgtattgtatgacagaa-gatttgatgcaaatatatttttaaaggaaatatt 7502723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 637
Target Start/End: Complemental strand, 15539809 - 15539731
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||| ||  ||||| ||||||||||||||| |||||| |||||||||| ||||||||| |||||    
T  15539809 ttttactataaatatagacattgtatcagtgtaaaccttgagatatagggggttgaaacaagggtttagaatgacaaca 15539731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 18800640 - 18800566
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  ||||| |||||| | |||||| ||||||||||||||||| |||||||    
T  18800640 atacttttactataaatatagaccttgtatcagggtaaacatggagatatagggggctgaaacaagggtttagaa 18800566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 543 - 637
Target Start/End: Original strand, 28196542 - 28196636
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||  | ||  |||||||||||| |||||||||||||||||||||||| | ||||||| |||||||    
T  28196542 aatttatgagggattcttttactataaatatatgctttgtatcagagtaaacattgagatagagggggctgaaacaaaggtttagaaaggcaaca 28196636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 507
Target Start/End: Complemental strand, 34575617 - 34575528
Alignment:
Q  411 aaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 507  Q
    ||||||||||||||||| ||| ||| |  |||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||    
T  34575617 aaatatatttttgtaccatataaaggaaaatttgatgcaaatatattttgaaagggaata-------tttgatgcaaatattctttcactgaaggag 34575528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 45280322 - 45280249
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||| |||||||||||| |||||  ||||||| |||| |||||||||||||||||||||||||| |||||||    
T  45280322 tactttcactataaatatataccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 45280249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 561 - 637
Target Start/End: Original strand, 3022086 - 3022162
Alignment:
Q  561 ttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| ||| ||||||||||||| |||| || |||||||    
T  3022086 ttactataaatatagactttgtatcagagtaaaccttgagatataggaggctgaaacaagggtttataaaggcaaca 3022162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 11739895 - 11739824
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| ||  || || ||||||||||||||||||||||||| ||||||| |||||||    
T  11739895 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctggaacaagggtttagaa 11739824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 41304884 - 41304806
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagg 465  Q
    |||||| |||||||||||||| | |||||||||||||||| | ||||||| | ||||||||||||||||||||| |||||    
T  41304884 tgctgacaatatatttatggatagtaaatatatttttgta-catatgaaggaagatttgatgcaaatatatttttaaagg 41304806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 6259153 - 6259071
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  || ||| ||||| |||||||||||| || |||||||||  ||||||| |||||||    
T  6259153 atacttttactataaatatagaccttgtattagactaaactttgagatagaggaggatgaaacaagagtttagaaaggcaaca 6259071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 637
Target Start/End: Complemental strand, 19502345 - 19502267
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||  ||||||| |||| | |||||| ||||||||||||||||  ||||||| |||||||    
T  19502345 ttttactataaatatagaccttgtatcagagcaaacttggagataaagggggctgaaacaagagtttagaaaggcaaca 19502267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 43623906 - 43623824
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||| |||||||||  ||||||||||||   ||||||||||||| |||||||| | ||||||| |||||||    
T  43623906 atacttttactataaaaatagaccttgtatcagagtaaactgggagatagaggggggtgaaacaatggtttagaaaggcaaca 43623824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 21521033 - 21520949
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| |||||  |||||| ||||| ||||||  |||| ||||||||||||||| ||||||| |||||||    
T  21521033 atacttttactataaatataaaccttgtatcagactaaactttgagagatagatggggctgaaacaagggtttagaaaggcaaca 21520949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 537 - 606
Target Start/End: Original strand, 40699209 - 40699278
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 606  Q
    ||||||| ||| ||||  ||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  40699209 gttccaattttctgagggatacttttactataaatatagaccttgcatcagagtaaaccttgagagagag 40699278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 621
Target Start/End: Original strand, 14837193 - 14837256
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 621  Q
    |||||||| ||||||||||| ||  ||||| |||||||||||||||||||| ||||||||||||    
T  14837193 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaagg 14837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 39286892 - 39286952
Alignment:
Q  320 tcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatttt 384  Q
    |||||||||||||||||    | |||||||||||||||||||| |||||||||||||||||||||    
T  39286892 tcaaaatttgatggatg----agattgttgctaaaaatataaatgatttgtttcaaatatatttt 39286952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 637
Target Start/End: Original strand, 38020064 - 38020142
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||| ||  ||| | |||||||| ||||||||||||| || ||||||| ||||||| |||||||    
T  38020064 ttttactataaatatagacattgtatcggtgtaaacctggagatagagggggttggaacaagggtttagaaaggcaaca 38020142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 543 - 629
Target Start/End: Complemental strand, 45239331 - 45239240
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||  || ||||||||||||||||||||| |  |||||| |||||||||||||    |||||||||||||||||| |||||||||    
T  45239331 aatttatgagggatgcttttactataaatatagaccattcatcagatgtaaaccttgagagagatagagggggctgaaacaatgatttagaa 45239240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 556 - 629
Target Start/End: Original strand, 22874060 - 22874133
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| ||||||||| || | ||  ||||||| |||||| |||||||||||||||||||||||| |||||||    
T  22874060 tacttttgctataaatacaggctttgtatcagagcaaacctggagatagagggggctgaaacaagggtttagaa 22874133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 601
Target Start/End: Complemental strand, 20147104 - 20147040
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 601  Q
    ||||||| ||||||||  ||| ||||||||||||||||||||||  |||| ||||||||||||||    
T  20147104 gttccaattttatgaggaatatttttactataaatatagaccttgtatcaaagtaaaccttgaga 20147040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 7502582 - 7502633
Alignment:
Q  319 ctcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgt 370  Q
    |||||||||||||||||| |||| ||||||||| ||| ||||||||||||||    
T  7502582 ctcaaaatttgatggatgaagaagattgttgctcaaagtataaaagatttgt 7502633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 566 - 629
Target Start/End: Complemental strand, 34979906 - 34979843
Alignment:
Q  566 ataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||| ||  || || ||||||||||||||||||||||||||||||||  |||||||    
T  34979906 ataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagcgtttagaa 34979843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 41304964 - 41304898
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgct 389  Q
    ||||||||||||||||||||| |||| |||     |||||||||||||||||||  ||||||||||||||||||    
T  41304964 tgactcaaaatttgatggatgaagaagatt-----taaaaatataaaagatttg--tcaaatatattttgtgct 41304898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 5377770 - 5377685
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||   |||||| |||| ||    |||||||||||| ||||||||||| ||||||| |||||||    
T  5377770 tactttcactataaatatagaccttgtttcagagcaaactttgagagagatagaggggactgaaacaagggtttagaaaggcaaca 5377685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 629
Target Start/End: Original strand, 17848350 - 17848434
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||  || |||||||||||||||||| | ||  |||||  ||| ||||||||||||||||||| |||| ||| |||||||    
T  17848350 aatttatgagggattcttttactataaatataggctttgtatcag--taatccttgagatagagggggctcaaacgagggtttagaa 17848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 606
Target Start/End: Original strand, 35107217 - 35107268
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 606  Q
    ||||||||||||||||||||||| ||  |||| ||||||||||||| |||||    
T  35107217 atacttttactataaatatagacattgtatcatagtaaaccttgaggtagag 35107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Original strand, 38020162 - 38020201
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  38020162 gagatagagggggctgaaacaagggtttagaaaggcaaca 38020201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 617
Target Start/End: Complemental strand, 38414340 - 38414311
Alignment:
Q  588 agtaaaccttgagatagagggggctgaaac 617  Q
    ||||||||||||||||||||||||||||||    
T  38414340 agtaaaccttgagatagagggggctgaaac 38414311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 606
Target Start/End: Complemental strand, 17897580 - 17897528
Alignment:
Q  555 atacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagag 606  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||| |||||    
T  17897580 atacttttactataaatatagaccttgtatcagatgtaaaacttgaggtagag 17897528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 545 - 597
Target Start/End: Complemental strand, 20146955 - 20146903
Alignment:
Q  545 tttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt 597  Q
    ||||||||  ||| ||||||||||||||||||||||  |||| ||||||||||    
T  20146955 tttatgagggatatttttactataaatatagaccttgtatcaaagtaaacctt 20146903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 606
Target Start/End: Original strand, 20589581 - 20589629
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagag 606  Q
    |||||||||||||||||||||||  ||||||  ||||||||||| ||||    
T  20589581 cttttactataaatatagaccttgtatcagatgaaaccttgagagagag 20589629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 96)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 47905956 - 47906293
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47905956 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 47906055  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  47906056 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 47906155  T
Q  506 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------ga 599  Q
    ||         ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      ||    
T  47906156 agaaaaaaaaagtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagaga 47906255  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| |||||||||||||||    
T  47906256 gatagagggggctgaaacaagggtttagaatggcaaca 47906293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 31736115 - 31735779
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31736115 tgttgtagtatgactcaaaatttgatggaaggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 31736016  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  31736015 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 31735916  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacct----tgag 600  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |    ||||    
T  31735915 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgaatgag 31735816  T
Q  601 atagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||| |||||||| ||||||| |||||||    
T  31735815 atagagggggctaaaacaagggtttagaaaggcaaca 31735779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 17325227 - 17324894
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  17325227 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgagttgaaaatatatttatgg 17325128  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||    
T  17325127 acaataaatatatttttgtaccgtatgaaaaacgatttgatgcaaatatattttgcaagggaatattatattttttatgcaaatattctttcactgaagg 17325028  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    ||           |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||    
T  17325027 agaaaaaaaaaacgtatcttcagggtgatattcgttccaaatttatgagttatacttttactataaatatagaccttgaaccagagtaaacctgaagata 17324928  T
Q  604 gagggggctgaaacaaggatttagaatggcaaca 637  Q
     |||||||| |||||||| |||||||||||||||    
T  17324927 cagggggctaaaacaagggtttagaatggcaaca 17324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 28998844 - 28998511
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28998844 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaactataaaagatttgtttaaaatatattttgtgctgaaaatatatttatgg 28998745  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  28998744 acaataaatacatttttgtaccgtacgaagaaatatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 28998645  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    ||           |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||    
T  28998644 agaaaaaaaaaccgtatatttagtgtggtattcgttccaaatttatgagttatacttttactataaatatagactttgaatcagagtaaactttgagata 28998545  T
Q  604 gagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||| ||||||||||||| ||||||||| |||||    
T  28998544 gaggaggctgaaacaagggtttagaatgacaaca 28998511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 29004560 - 29004227
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29004560 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaactataaaagatttgtttaaaatatattttgtgctgaaaatatatttatgg 29004461  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  29004460 acaataaatacatttttgtaccgtacgaagaaatatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 29004361  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    ||           |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||    
T  29004360 agaaaaaaaaaccgtatatttagtgtggtattcgttccaaatttatgagttatacttttactataaatatagactttgaatcagagtaaactttgagata 29004261  T
Q  604 gagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||| ||||||||||||| ||||||||| |||||    
T  29004260 gaggaggctgaaacaagggtttagaatgacaaca 29004227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 39931762 - 39932096
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39931762 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 39931861  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  | ||||||    
T  39931862 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatacttttgatgcaaatattcttttattgaagg 39931961  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagat 602  Q
    ||          ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||  || |||  |||| ||  |||||    
T  39931962 agaaaaaaaaacgtatcttcagtgtagtattcgttccaaatttatgagttatatgtttactataaatatagaccttgtatgagacaaaactttgagagat 39932061  T
Q  603 agagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||| ||||||| |||||||    
T  39932062 agagggggctgaaacaagggtttagaaaggcaaca 39932096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 306 - 606
Target Start/End: Original strand, 24325347 - 24325648
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24325347 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 24325446  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  24325447 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagtgaatattatatttttgatgcaaatattctttcactgaagg 24325546  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||          ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| |||||| ||    
T  24325547 agaaaaaaaaatgtatctttagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcagagcaaactttgagagag 24325646  T
Q  605 ag 606  Q
    ||    
T  24325647 ag 24325648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 306 - 629
Target Start/End: Complemental strand, 9460013 - 9459683
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9460013 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 9459914  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  9459913 acaataaatatatttttataccgtatgaagaacaatttaatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 9459814  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 598  Q
    ||          ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  9459813 agaaaaaaaaacgtatcttcattgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 9459714  T
Q  599 agatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||| |||||||    
T  9459713 agatagagggggctgaaacaagggtttagaa 9459683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 9463840 - 9463502
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9463840 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 9463741  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  9463740 acaataaatatatttttatatcgtatgaagaacaatttaatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 9463641  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 598  Q
    ||          ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  9463640 agaaaaaaaaacgtatcttcattgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 9463541  T
Q  599 agatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  9463540 agatagagggggctgaaacaagggtttagaaaggcaaca 9463502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 306 - 610
Target Start/End: Original strand, 48664852 - 48665167
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48664852 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 48664951  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag- 504  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| || |||||     
T  48664952 acaataaatatatttttgtaccgtatgaagaacgatttgatgcacatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaaga 48665051  T
Q  505 ----------gagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaac 594  Q
               |          ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48665052 aagaaaaaaaaaaaaaaaaaacgtatcttcagtgtagtatttgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaac 48665151  T
Q  595 cttgagatagaggggg 610  Q
    ||| ||||||||||||    
T  48665152 cttaagatagaggggg 48665167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 306 - 606
Target Start/End: Complemental strand, 15295439 - 15295137
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15295439 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 15295340  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  15295339 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagcgaatattatatttttgatgcaaatattctttcactgaagg 15295240  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    ||           ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||  ||||||| |||| |||||| |    
T  15295239 agaaaaaaaaaatgtatcttcagtgtggtattcgttcctaatttatgagttatatgtttactataaatatagaccttgtatcagagcaaactttgagaga 15295140  T
Q  604 gag 606  Q
    |||    
T  15295139 gag 15295137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 27337532 - 27337196
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27337532 tgttgtagtatgactccaaatttgatggatggggaatattgttgctaaaaatatataagatttgtttcaaatatattttgtgctgaaaatatatttatgg 27337433  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  27337432 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttaactgaagg 27337333  T
Q  506 -agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 600  Q
     |          ||||||||  ||||||||| |||||||||||||| |||||||||||||||||||||||||||||  || ||  ||||| ||    |||    
T  27337332 aaaaaaaaaaacgtatcttcgatgtggtatttgttccaaatttatgcgttatacttttactataaatatagaccttgtattaggctaaactttgagagag 27337233  T
Q  601 atagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  27337232 atagagggggctgaaacaagggtttagaaaggcaaca 27337196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 27339730 - 27339388
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatat----tt 401  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||    
T  27339730 tgttgtagtatgactccaaatttgacggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatatattt 27339631  T
Q  402 atggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactg 501  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  27339630 atggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactg 27339531  T
Q  502 aagg---agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt- 597  Q
    ||||   |          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  || ||  ||||| ||     
T  27339530 aaggaaaaaaaaaagaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtattaggctaaactttg 27339431  T
Q  598 ---gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
       ||||||||||||||||||||||||  |||||| |||||||    
T  27339430 agagagatagagggggctgaaacaagggcttagaaaggcaaca 27339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 2949815 - 2949489
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2949815 tgttatagtatgactcaaaatttcatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 2949716  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag- 504  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||     
T  2949715 acaataaatatatttttgtattgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatacaaatattctttcactgaaga 2949616  T
Q  505 gagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    ||          ||||||      |||||||||||||||||||||||||||||||||||| |||||||||||  || |||| ||| ||||||||||||||    
T  2949615 gaaaaaaaaaacgtatct------tggtattcgttccaaatttatgagttatacttttacaataaatatagatattgaatccgagaaaaccttgagatag 2949522  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||| ||||||||| |||||    
T  2949521 agggggctgaaacaagggtttagaatgacaaca 2949489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 333 - 637
Target Start/End: Complemental strand, 21948756 - 21948445
Alignment:
Q  333 gatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaatatatttttgtaccgtatg 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21948756 gatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaatatatttttgtatcgtatg 21948657  T
Q  433 aagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag---nnnnnnnnngtatcttcagtgt 529  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||            |||||||||||||    
T  21948656 aagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcacagaaggaggaaaaaaaaaacgtatcttcagtgt 21948557  T
Q  530 ggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggattt 625  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||  |||| | ||||| ||    |||||||||||||||||||||||| |||    
T  21948556 ggtattcgttccaaatttatgagttatatgtttactataaatatagaccttgtatcatactaaactttgagagagatagagggggctgaaacaagggttt 21948457  T
Q  626 agaatggcaaca 637  Q
    |||| |||||||    
T  21948456 agaaaggcaaca 21948445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 305 - 495
Target Start/End: Complemental strand, 4131883 - 4131693
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  4131883 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaacatatatttatg 4131784  T
Q  405 gac-aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattctt 495  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4131783 gacaaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatat-tttgatgcaaatattctt 4131693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 305 - 495
Target Start/End: Complemental strand, 45694025 - 45693835
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45694025 gtgttgtactatgattcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaatatatttatg 45693926  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattctt 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||    
T  45693925 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagagaataatatattttttatgcaaatattctt 45693835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 306 - 491
Target Start/End: Complemental strand, 6115718 - 6115532
Alignment:
Q  306 tgttgtagtatgactcaaaa-tttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6115718 tgttgtaggatgactcaaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 6115619  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatat 491  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  6115618 gacaataaatatatttttgtatcgtatgaatgacgatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatat 6115532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 306 - 494
Target Start/End: Original strand, 6997214 - 6997395
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  6997214 tgttatagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaatata-ttatgg 6997312  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattct 494  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||      ||||||| ||||||||||| |||||||||||||||||    
T  6997313 acaataaatatatttttataccgtatgaagaacgatttgatgcaaa------ttgaaagagaatattatatttttgatgcaaatattct 6997395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 46432638 - 46432521
Alignment:
Q  304 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttat 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46432638 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttat 46432539  T
Q  404 ggacaataaatatatttt 421  Q
    ||||||||||||||||||    
T  46432538 ggacaataaatatatttt 46432521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 344 - 504
Target Start/End: Original strand, 6996067 - 6996221
Alignment:
Q  344 ttgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgattt 443  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6996067 ttgttgctaaaaatataaaagacttgtttcaaatatattttgtgctgaaaatatatttatggacaatacatatatttttgtaccgtatgaagaacgattt 6996166  T
Q  444 gatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    |||| |||      ||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  6996167 gatgtaaa------ttgaaagggaatattatatttttgttgcaaatattctttcactgaag 6996221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 418 - 606
Target Start/End: Complemental strand, 46432207 - 46432017
Alignment:
Q  418 tttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag--nnnnnnnn 515  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||              
T  46432207 tttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaggagaaaaaaaaaa 46432108  T
Q  516 ngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 606  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| ||||    
T  46432107 cgtatcttcactgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagag 46432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 306 - 459
Target Start/End: Original strand, 16561131 - 16561284
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||| |||||| |||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  16561131 tgttgttgtatgattcaaaatttgttggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttgtgctgaaaatatatttattg 16561230  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatatttt 459  Q
    ||||||||||| |||||||||||||||||| |  ||||||  ||||||||||||    
T  16561231 acaataaatatctttttgtaccgtatgaaggaatatttgaaacaaatatatttt 16561284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 428 - 636
Target Start/End: Complemental strand, 2510801 - 2510583
Alignment:
Q  428 gtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg------agnnnnnnnnngtatc 521  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||      ||         ||||     
T  2510801 gtatgaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaaggagggaaagaaaaaaaacgtatt 2510702  T
Q  522 ttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaac 617  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    ||||||||||||||||||||    
T  2510701 ttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaac 2510602  T
Q  618 aaggatttagaatggcaac 636  Q
    |||| |||| || ||||||    
T  2510601 aagggtttataaaggcaac 2510583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 530 - 637
Target Start/End: Complemental strand, 6996065 - 6995958
Alignment:
Q  530 ggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| | |||||||    
T  6996065 ggtattcgttccaaatttatgagttatacttttattataaatatagaccttgaatcagagtaaatcttgagatagagggggccgaaacaacggtttagaa 6995966  T
Q  630 tggcaaca 637  Q
     |||||||    
T  6995965 aggcaaca 6995958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 386 - 472
Target Start/End: Complemental strand, 11693666 - 11693580
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  11693666 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttaaagggaatatt 11693580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 13785835 - 13785662
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg-----------------tgctgaaaatata 398  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||                 |||||||||||||    
T  13785835 tgactcaaaaattgatggatggagaatattgtcgctaaaaatatgaaagatttgtttcaaatatattttgtgtttctagaatattgttgctgaaaatata 13785736  T
Q  399 tttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    ||||| || | |||||||||||||||| ||||||||| | ||||||||||||||||||||| ||| ||||||||    
T  13785735 tttatagatagtaaatatatttttgtatcgtatgaaggaagatttgatgcaaatatatttttaaaaggaatatt 13785662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 440 - 610
Target Start/End: Complemental strand, 26520580 - 26520403
Alignment:
Q  440 atttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggagnnnnnnnnn--------gtatcttcagtgtgg 531  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||| ||                 ||||||||||||||     
T  26520580 atttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcaccgaagaagaaaaaaacaaaagaaatgtatcttcagtgtga 26520481  T
Q  532 tattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagaggggg 610  Q
    |||||||||||||||||| ||||||| || | |||||||||||||| ||  ||||||||||||||||||||||||||||    
T  26520480 tattcgttccaaatttataagttatatttct-ctataaatatagactttgtatcagagtaaaccttgagatagaggggg 26520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 32260746 - 32260882
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttg-----------------tgctgaaaatata 398  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||                 |||||||||||||    
T  32260746 tgactcaaaatttgatggatgaagaagattgttgctaaaaatataaaagaattgtttaaaatatattttgtgttttcagaagattgttgctgaaaatata 32260845  T
Q  399 tttatggacaataaatatatttttgtaccgtatgaag 435  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32260846 tttatgaacaataaatatatttttgtaccgtatgaag 32260882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 389 - 472
Target Start/End: Original strand, 14352759 - 14352842
Alignment:
Q  389 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    |||||||||||||||| | | |||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  14352759 tgaaaatatatttatgaatagtaaatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttaaagggaatatt 14352842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 13215022 - 13215104
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||| ||||||| |||||||    
T  13215022 atacttttactataaatatagaccttgtatcagagtaaattttgagatagagggggctgaaacaagggtttagaaaggcaaca 13215104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 41646861 - 41646943
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||    
T  41646861 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaataagggtttagaaaggcaaca 41646943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 47451589 - 47451671
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||    
T  47451589 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggcttaaacaagggtttggaatggcaaca 47451671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 545 - 626
Target Start/End: Complemental strand, 49495549 - 49495468
Alignment:
Q  545 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 626  Q
    ||||||||  ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  49495549 tttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggttta 49495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 28207406 - 28207332
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| |||||||    
T  28207406 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 28207332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 38925818 - 38925736
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||  || |||| |||||||    
T  38925818 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagagttcagaaaggcaaca 38925736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 558 - 631
Target Start/End: Complemental strand, 14183923 - 14183850
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatg 631  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  14183923 cttttactataaatatagaccatgtatcagagtaaaccttgagatagagagggctgaaacaagggtttagaatg 14183850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 532 - 637
Target Start/End: Original strand, 20302378 - 20302482
Alignment:
Q  532 tattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatg 631  Q
    |||| ||||||||||| | ||| | ||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |    
T  20302378 tatttgttccaaattt-taagtgaaacttttattataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 20302476  T
Q  632 gcaaca 637  Q
    ||||||    
T  20302477 gcaaca 20302482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 537 - 637
Target Start/End: Complemental strand, 31423232 - 31423132
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaac 636  Q
    ||||||| |||||| |  ||||||||||||||||||||  | ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  31423232 gttccaattttatgggagatacttttactataaatataagcattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaac 31423133  T
Q  637 a 637  Q
    |    
T  31423132 a 31423132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 537 - 629
Target Start/End: Original strand, 42922157 - 42922249
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||  ||||||||||||||||||||||  ||  ||||||||||||||| |||||||||||| ||||| |||| |||||||    
T  42922157 gttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagatagagggggttgaaataagggtttagaa 42922249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 541 - 629
Target Start/End: Complemental strand, 50079175 - 50079087
Alignment:
Q  541 caaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||  || |||||||||||||||||||| ||  || || ||||||||||||||||||||||||||||||||| |||||||    
T  50079175 caaatttatgagggatgcttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 50079087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 51749982 - 51750062
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  51749982 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 51750062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 538 - 629
Target Start/End: Complemental strand, 18800925 - 18800835
Alignment:
Q  538 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||| ||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||||||||||| | |||||||    
T  18800925 ttccaattttatgagg-atacttttactataaatatagaccttgtatcagagtaaaccttgagatacaaggggctgaaacaaaggtttagaa 18800835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 445 - 507
Target Start/End: Complemental strand, 6115541 - 6115479
Alignment:
Q  445 atgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 507  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  6115541 atgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaaggag 6115479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 543 - 629
Target Start/End: Complemental strand, 11457827 - 11457741
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||| | |||||||    
T  11457827 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaatggtttagaa 11457741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 15823487 - 15823569
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||| ||||||| | |||||| ||||||||||||||||| ||||||| |||||||    
T  15823487 atacttttactataaatatagaccttgtatcaaagtaaacttagagataaagggggctgaaacaagggtttagaaaggcaaca 15823569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 559 - 637
Target Start/End: Original strand, 18307054 - 18307132
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||| |||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  18307054 ttttgctataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 18307132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 559 - 637
Target Start/End: Complemental strand, 25248850 - 25248772
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25248850 tttttctagaaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 25248772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 559 - 629
Target Start/End: Complemental strand, 25251611 - 25251541
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| | |||||||    
T  25251611 ttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaaaggtttagaa 25251541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 543 - 629
Target Start/End: Complemental strand, 50077024 - 50076938
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  50077024 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagaaagggctgaaacaaggatttagaa 50076938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 6822958 - 6823038
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||  |||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  6822958 acttttactatttatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 6823038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 13761780 - 13761860
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| | ||||||||| |||||||||||||| ||||||| |||||||    
T  13761780 acttttactataaatatagaccttgtatcagagcaaacttggagatagagagggctgaaacaagggtttagaaaggcaaca 13761860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 472
Target Start/End: Original strand, 10115509 - 10115653
Alignment:
Q  343 attgttgctaaaaatataaaagatttgtttcaaatatattttgtgct-----------------gaaaatatatttatggacaataaatatatttttgta 425  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||||||  |||| |     
T  10115509 attgttgttaaaaatataaaagatttgtttcaaatatattttgtgcttccataagattgttgttgaaaatatatttatggacaataaatat--ttttatc 10115606  T
Q  426 ccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    |||||||||| |  |||||||||||||||||||| ||| ||||||||    
T  10115607 ccgtatgaaggaatatttgatgcaaatatatttttaaacggaatatt 10115653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 16428594 - 16428676
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||   ||| ||||||| ||||| | ||||||||||||||||||||||| ||||||| |||||||    
T  16428594 atacttttactataaatataggttttatatcagagcaaaccattagatagagggggctgaaacaagggtttagaaaggcaaca 16428676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 637
Target Start/End: Original strand, 17318838 - 17318916
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||   ||  |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  17318838 ttttactataaatataggttttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 17318916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 8347627 - 8347535
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| ||||||||   ||||||||||||||| |||||||||  |||||| |||||||||||||||||||||| |||||||||| |||||||    
T  8347627 gttccaattttatgaggggtacttttactataaa-atagaccttgtatcagatgtaaaccttgagatagagggggttgaaacaagggtttagaa 8347535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 28842434 - 28842518
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| |||||  ||||||| |||| ||||||  |||||||||||||||||||| ||||||| |||||||    
T  28842434 atacttttactataaatataaaccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaaaggcaaca 28842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 555 - 616
Target Start/End: Complemental strand, 30790734 - 30790673
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||    
T  30790734 atacttttactataaatatagacattgtatcagagtaaaccttgagatagagggagctgaaa 30790673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 584 - 637
Target Start/End: Complemental strand, 4131692 - 4131637
Alignment:
Q  584 tcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  4131692 tcagagtaaaccttgagagatagagggggctgaaacaaggatttagaatggcaaca 4131637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 10400166 - 10400086
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| |||||||||||||||||  ||||||| ||||   |||||||||||||||||||||||| ||||||||| |||||    
T  10400166 actttttctataaatatagaccttgtatcagagcaaactgggagatagagggggctgaaacaagggtttagaatgacaaca 10400086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 621
Target Start/End: Original strand, 16231544 - 16231608
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 621  Q
    ||||||||||||||||||||||||  |||| || |||| ||||||||||||||||||||||||||    
T  16231544 acttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagg 16231608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 537 - 629
Target Start/End: Original strand, 39462443 - 39462534
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||| | ||| ||||||| ||||||||||||||||||  |||||||||||| |||||||||||  ||||||||||| | |||||||    
T  39462443 gttccaaattt-taagtaatactttcactataaatatagaccttgtatcagagtaaactttgagatagagaaggctgaaacaaaggtttagaa 39462534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 629
Target Start/End: Original strand, 51752308 - 51752380
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||  |||||||    
T  51752308 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagagtttagaa 51752380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 2617460 - 2617531
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||| ||||||||||||||||||  ||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  2617460 ctttcactataaatatagaccttgtatcagagcaaactttgagatagaggaggctgaaacaagggtttagaa 2617531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 17186465 - 17186386
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||  ||  ||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||    
T  17186465 cttttaatataaatatagattttgtatcagagcaaaccttgagatagagggggctgaaataagggtttagaaaggcaaca 17186386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 31489859 - 31489930
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| ||  || || |||||||||||||||||||||| |||||||||| |||||||    
T  31489859 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggttgaaacaagggtttagaa 31489930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 9241425 - 9241344
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagag-ggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| | ||  ||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||    
T  9241425 tacttttactataaatataggctttgtatcagagtaaaccttaagatagaggggggctgaaacaagg-tttagaaaggcaaca 9241344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 6823827 - 6823908
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagataga-gggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||  |||||||||||  ||||||| |||| |||||||||| |||||||||||||||| ||||||| |||||||    
T  6823827 acttttactatttatatagaccttgtatcagagcaaactttgagatagaggggggctgaaacaagggtttagaaaggcaaca 6823908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 12302849 - 12302771
Alignment:
Q  556 tacttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||    |||||||||||||||||||| |||||||    
T  12302849 tacttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggctgaaacaagggtttagaa 12302771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 426
Target Start/End: Complemental strand, 13112099 - 13112046
Alignment:
Q  373 caaatatattttgtgctgaaaatatatttatggacaataaatatatttttgtac 426  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13112099 caaatgtattttatgctgaaaatatattcatggacaataaatatatttttgtac 13112046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 558 - 619
Target Start/End: Complemental strand, 50248909 - 50248848
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaa 619  Q
    |||||||||||||||||||| ||  ||||| |||||||||||||||||||| ||||||||||    
T  50248909 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaa 50248848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 629
Target Start/End: Original strand, 16226110 - 16226182
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||  |||| || |||| |||||||||||||| || |||||||| |||||||    
T  16226110 acttttactataaatatagaccttgtatcaaagcaaactttgagatagaggggtctaaaacaagggtttagaa 16226182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 20291400 - 20291480
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  || |||| |||  ||||||||||||| | |||||||||| ||||||| |||||||    
T  20291400 acttttactataaatatagaccttgtattagagcaaattttgagatagagggagatgaaacaagggtttagaaaggcaaca 20291480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 11693753 - 11693686
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattt 383  Q
    ||||||||||||||||||||| |||| ||| ||||||||| |||||||  ||||||| ||||||||||    
T  11693753 tgactcaaaatttgatggatgaagaagattattgctaaaattataaaaattttgttttaaatatattt 11693686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 537 - 636
Target Start/End: Complemental strand, 14098327 - 14098229
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaac 636  Q
    ||||||||||| | ||| ||||||| ||||||||||||||||||  |||| | ||||| |||||||||||||| ||||||||| | |||| || ||||||    
T  14098327 gttccaaattt-taagtaatactttcactataaatatagaccttgtatcaaactaaactttgagatagaggggactgaaacaatggtttaaaaaggcaac 14098229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 18839531 - 18839610
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  || |  ||||||| ||||||||||||||||||||||||| ||||||  |||||||    
T  18839531 cttttactataaatatagacattgtattattgtaaaccatgagatagagggggctgaaacaagggtttagataggcaaca 18839610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 6756469 - 6756550
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||| |||||||||||||| ||  ||| | ||||||||||| ||||||||| |||||||||||  |||||| |||||||    
T  6756469 tacttttgctataaatatagacattgtatcggtgtaaaccttgaaatagaggggactgaaacaagggcttagaaaggcaaca 6756550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 6997429 - 6997388
Alignment:
Q  304 agtgttgtagtatgactcaaaatttgatggatggagaatatt 345  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  6997429 agtgttgtagtatgactcaaaatatgatggatggagaatatt 6997388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 8349407 - 8349314
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| ||||||||  ||| ||||| |||||||||||| |||  || ||| | |||||||||||||||| |||||||||||||| |||||||    
T  8349407 gttccaattttatgagggataattttattataaatatagatcttgtattagatgcaaaccttgagatagagagggctgaaacaagggtttagaa 8349314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 607
Target Start/End: Original strand, 16561373 - 16561461
Alignment:
Q  518 tatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagg 607  Q
    ||||||||| ||| ||| |||| ||||||||||||||||| |||  ||||||||||| |||||| ||||||  ||||||||||| |||||    
T  16561373 tatcttcagcgtgatatccgtttcaaatttatgagttata-tttctctataaatataaaccttatatcagatgaaaccttgagagagagg 16561461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 629
Target Start/End: Original strand, 28840619 - 28840695
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaacctt--gagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  ||||||| |||| ||  |||||| |||||| |||||||||| |||||||    
T  28840619 atacttttactataaatatagaccttgtatcagagcaaactttgagagatacagggggatgaaacaagggtttagaa 28840695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 16431024 - 16431096
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggg 609  Q
    ||||||| ||||||||  |||||||||||||||||||||   ||  ||||||| |||||||||||||||||||    
T  16431024 gttccaattttatgagggatacttttactataaatataggttttgtatcagagcaaaccttgagatagagggg 16431096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 589 - 637
Target Start/End: Complemental strand, 31425325 - 31425277
Alignment:
Q  589 gtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  31425325 gtaaaccttgagataaagggggctgaaacaagggtttagaaaggcaaca 31425277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 590 - 629
Target Start/End: Complemental strand, 6115384 - 6115345
Alignment:
Q  590 taaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  6115384 taaaccttgagatagagggggctgaaacaagggtttagaa 6115345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 621
Target Start/End: Original strand, 17324009 - 17324072
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 621  Q
    |||||| ||||||||||||| ||  || ||||||||||||||||||||| ||||| ||||||||    
T  17324009 cttttattataaatatagactttgtattagagtaaaccttgagatagagagggctaaaacaagg 17324072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 555 - 598
Target Start/End: Original strand, 43104100 - 43104143
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttg 598  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  43104100 atacttttactataaatatagaccttgtatcagagtaaaccttg 43104143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 557 - 629
Target Start/End: Original strand, 47177301 - 47177377
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||  |||| || |||| ||    |||||||||||||||||||||||| |||||||    
T  47177301 acttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttagaa 47177377  T

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Target: chr1; HSP #88
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 557 - 629
Target Start/End: Original strand, 47179652 - 47179728
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||  |||| || |||| ||    |||||||||||||||||||||||| |||||||    
T  47179652 acttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttagaa 47179728  T

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Target: chr1; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 555 - 634
Target Start/End: Complemental strand, 3579958 - 3579877
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagag--ggggctgaaacaaggatttagaatggca 634  Q
    ||||||||||| ||||||||||||||  ||||| |||||  |||||||||||  ||||||||||||||| || |||| ||||    
T  3579958 atacttttactttaaatatagaccttgtatcagcgtaaaatttgagatagagggggggctgaaacaagggttcagaaaggca 3579877  T

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Target: chr1; HSP #90
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 558 - 635
Target Start/End: Complemental strand, 50307884 - 50307807
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 635  Q
    |||||||||||||||||  | ||  |||| |||||||||||||||| | |||||||||| |||| ||||||| |||||    
T  50307884 cttttactataaatataagctttgtatcaaagtaaaccttgagatatatggggctgaaaaaagggtttagaaaggcaa 50307807  T

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Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 384
Target Start/End: Complemental strand, 16855296 - 16855265
Alignment:
Q  353 aaaatataaaagatttgtttcaaatatatttt 384  Q
    ||||||||||||||||||||||||||||||||    
T  16855296 aaaatataaaagatttgtttcaaatatatttt 16855265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 337
Target Start/End: Complemental strand, 21964397 - 21964366
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatgg 337  Q
    ||||||||||||||||||||||||||||||||    
T  21964397 tgttgtagtatgactcaaaatttgatggatgg 21964366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 26613577 - 26613503
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaacctt--gagatagagggggctg-aaacaaggatttagaa 629  Q
    ||||| |||||||||||||||||  ||||||  |||||||  |||||||||||||||| |||||||| |||||||    
T  26613577 cttttgctataaatatagaccttgtatcagatgaaaccttgagagatagagggggctgaaaacaagggtttagaa 26613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 616
Target Start/End: Complemental strand, 15669731 - 15669669
Alignment:
Q  555 atacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaa 616  Q
    |||||||||||||||||| |||||||  | |||| |||||| ||| |||||||||||||||||    
T  15669731 atacttttactataaatacagaccttgtagcagatgtaaacattgggatagagggggctgaaa 15669669  T

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Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 609
Target Start/End: Original strand, 40133864 - 40133930
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggg 609  Q
    ||||||||||  || |||||||||||||||||| | ||  ||||||||||| ||||||||| |||||    
T  40133864 aatttatgagggattcttttactataaatataggctttgtatcagagtaaatcttgagatatagggg 40133930  T

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Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 621
Target Start/End: Complemental strand, 13125787 - 13125730
Alignment:
Q  564 ctataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 621  Q
    ||||||||| | |||||  ||||||||||| ||||||| | |||||||||||||||||    
T  13125787 ctataaatagaaaccttgtatcagagtaaaacttgagagaaagggggctgaaacaagg 13125730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 305 - 637
Target Start/End: Original strand, 78882 - 79217
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  78882 gtgttgtagtatgacttaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtctcaaatatattttctgctaaaaatatatttatg 78981  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  78982 gataataaatatatttttgtactgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaag 79081  T
Q  505 gag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 601  Q
    |||            |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  79082 gaggaaaaaaaaaatgtatcttcagtgtggtattcgttccaaatttatgagttatacctttactataaatatagaccttgaatcagagtaaaacttgaga 79181  T
Q  602 tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||| |||||||| ||||||| |||||||    
T  79182 tagagggggctaaaacaagggtttagaaaggcaaca 79217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 238; Significance: 1e-131; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 304 - 629
Target Start/End: Complemental strand, 12196106 - 12195779
Alignment:
Q  304 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttat 403  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12196106 agtgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttat 12196007  T
Q  404 ggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaa 503  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  12196006 ggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaa 12195907  T
Q  504 ggag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 601  Q
    ||||           | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| || |||| ||||||    
T  12195906 ggagaaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaaagcaaactttgaga 12195807  T
Q  602 tagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| |||||||    
T  12195806 tagagggggctgaaacaagggtttagaa 12195779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 2629479 - 2629141
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2629479 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 2629380  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  2629379 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 2629280  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 603  Q
    ||           ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||||   ||||| |||||| |    
T  2629279 aggaaaaaaaaacgtatcttcagtgtagtatttgttccaaatttattagttatacttttactataaatatagaccttgtatcatgttaaactttgagaga 2629180  T
Q  604 gag-----ggggctgaaacaaggatttagaatggcaaca 637  Q
    |||     ||||||||||||||| ||||||| |||||||    
T  2629179 gagatagaggggctgaaacaagggtttagaaaggcaaca 2629141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 30035196 - 30034859
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  30035196 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaatatatttatag 30035097  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  30035096 acaataaatatatttttgtatcgtatgaagaacgatttaatgcaaatatattttgaaagggaatattatatttttgatgcagatattctttcactgaagg 30034997  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    ||    
T  30034996 agaaaataaaaacgtatcttcaatgtgatatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttaagaga 30034897  T
Q  600 gatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||| ||| |||||||| ||||||| |||||||    
T  30034896 gatagagggagctaaaacaagggtttagaaaggcaaca 30034859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 314 - 637
Target Start/End: Original strand, 17852275 - 17852600
Alignment:
Q  314 tatgactcaaaatttgatggatggagaatattgt--tgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaata 411  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  17852275 tatgactcaaaatttgatg-atggagaatattgtgttgctaaaaatataaaagatttgtttcaaatat--tttatgctgaaaatatatttatggacaata 17852371  T
Q  412 aatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag---- 507  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||        
T  17852372 aatatatttttgtaccttatgaagaactatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattatttcactgaaagagaaga 17852471  T
Q  508 nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagg 607  Q
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  17852472 aaaaaaaaagtatcttc-gtgtggtattcgttccaaatttatgagttatacttttactataaatatagactttgaatcagagtaaaccttgagatagagg 17852570  T
Q  608 gggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||| ||||||||| |||||    
T  17852571 gggctgaaacaagggtttagaatgacaaca 17852600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 306 - 629
Target Start/End: Original strand, 30966923 - 30967251
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30966923 tgttgtagtatgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttgtgctgaaaatatatttatgg 30967022  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  30967023 acaataaatatatttttgtattgtatgaagaacgatttaatgcaaatatattttgaaagcgaatattatatttttgatgcaaatattctttcactgaagg 30967122  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    ||           | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  || ||  ||||| ||    ||    
T  30967123 agaaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtat-aggctaaactttgagaga 30967221  T
Q  600 gatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||| |||||||    
T  30967222 gatagagggggctgaaacaagggtttagaa 30967251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 306 - 580
Target Start/End: Original strand, 18317751 - 18318027
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18317751 tgttgtagtatgactcaaaatttgaaggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 18317850  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  18317851 acaataaatatatttttgtatcgtatgaaggaagatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatattctttcactgaagg 18317950  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 580  Q
    ||           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18317951 agaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatactttcactataaatatagacctt 18318027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 306 - 580
Target Start/End: Complemental strand, 26933158 - 26932883
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||    
T  26933158 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatattattatgg 26933059  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  26933058 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 26932959  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 580  Q
    ||          | ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  26932958 agaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgggttatactttcactataaatatagacctt 26932883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 19705165 - 19704825
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19705165 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaagatattttgtgctgaaaatatatttatgg 19705066  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  19705065 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatattctttcactgaagg 19704966  T
Q  506 ag----nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt---- 597  Q
    ||             ||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||| |||| ||        
T  19704965 agaaaaaaaagaaacgtatcttaagtgtgatattcgttccaaatttatgagttata-tttcactataaatatagaccttgtatcagagcaaactttgaga 19704867  T
Q  598 --gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
      ||||| |||||||||||||||||| ||||||| |||||||    
T  19704866 gagagatggagggggctgaaacaagggtttagaaaggcaaca 19704825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 304 - 507
Target Start/End: Complemental strand, 5275930 - 5275727
Alignment:
Q  304 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttat 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5275930 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttgtgctgaaaatatatttat 5275831  T
Q  404 ggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaa 503  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  5275830 ggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaa 5275731  T
Q  504 ggag 507  Q
    ||||    
T  5275730 ggag 5275727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 308 - 615
Target Start/End: Original strand, 17011781 - 17012080
Alignment:
Q  308 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggac 407  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||||||  ||||||  ||||||||||||||||||    
T  17011781 ttgtagtatgacttaaaatttgatggatgaagaatattattgctaaaaatataaaag-tttgttttaaatat--tttgtgtagaaaatatatttatggac 17011877  T
Q  408 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 507  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||  |     
T  17011878 aataaatatatttttgtaccgtatgatggacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaaaa- 17011976  T
Q  508 nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagg 607  Q
             |||||||||| ||| | |||||||||||||||||||||||| |||  |||||||||||||||||  ||| |||||||||||||||||||||    
T  17011977 ---aaaaacgtatcttcagagtgatgttcgttccaaatttatgagttata-tttctctataaatatagaccttgtatcggagtaaaccttgagatagagg 17012072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 305 - 507
Target Start/End: Complemental strand, 22858537 - 22858343
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  22858537 gtgttgtagtatgactcaaaatttgatggatgaagaatattgttaataaaaatataaaagatttgttttaaatatactttgtgctgaaaatatatttatg 22858438  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    ||||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||        |||||||||||||||||| || |||||    
T  22858437 gacaataaatatatttttgtaccgtatgaaagaagattagatgcaaatatattttgaaagggaat--------tttgatgcaaatattctttcattgaag 22858346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 308 - 472
Target Start/End: Original strand, 20526548 - 20526708
Alignment:
Q  308 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggac 407  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       
T  20526548 ttgtagtatgactcaaaatttgatgggtgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttatgctgaaaatatatttatg--- 20526644  T
Q  408 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatata-ttttgaaagggaatatt 472  Q
      || ||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||    
T  20526645 --tacatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttgaaagagaatatt 20526708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 328 - 472
Target Start/End: Original strand, 30445243 - 30445404
Alignment:
Q  328 tgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgct-----------------gaaaatatatttatggacaat 410  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||                 ||||||||||||||| |||||    
T  30445243 tgatggatgaagaatattgttgctagaaatataaaatatttgtttcaaatatattttgtgcttccagaatattgttgctgaaaatatatttatgaacaat 30445342  T
Q  411 aaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    ||||||||||||||||| ||||||| | ||||||||||||||||||||| ||| ||||||||    
T  30445343 aaatatatttttgtaccatatgaaggaagatttgatgcaaatatattttaaaaaggaatatt 30445404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 15533036 - 15532945
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||| | ||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| |||||||    
T  15533036 gttccaaattt-taagttatacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 15532945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 537 - 635
Target Start/End: Complemental strand, 15541495 - 15541398
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 635  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| ||||||| |||||    
T  15541495 gttccaaattt-taagttacacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaaaggcaa 15541398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 543 - 630
Target Start/End: Original strand, 15346355 - 15346442
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaat 630  Q
    ||||||||||  ||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  15346355 aatttatgagggatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaccaagggtttagaat 15346442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 24338783 - 24338704
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  24338783 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 24338704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 32447651 - 32447572
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  32447651 cttttactataaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 32447572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 543 - 637
Target Start/End: Original strand, 3390343 - 3390437
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  ||||||||||||||||||||||| ||  |||||  |||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  3390343 aatttatgagagatacttttactataaatatagacattgtatcagtataaaccttgagatagacggggctgaaacaagggtttagaaaggcaaca 3390437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 558 - 635
Target Start/End: Original strand, 13057173 - 13057250
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 635  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  13057173 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaa 13057250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 556 - 621
Target Start/End: Complemental strand, 30729165 - 30729100
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 621  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  30729165 tacttttactataaatatagatcttgtatcagagtaaaccttgagatagagggggctgaaacaagg 30729100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 25477253 - 25477332
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||| ||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25477253 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 25477332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 1072215 - 1072133
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||| ||  |||||||||||| |||||||||| || |||||||||||| ||||||| |||||||    
T  1072215 atacttttactataaatatagacattgtatcagagtaaactttgagatagaaggagctgaaacaagggtttagaaaggcaaca 1072133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 14507513 - 14507431
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  || |||| |||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  14507513 atacttttactataaatatagaccttgtattagagcaaactttgagatagagggggctaaaacaagggtttagaaaggcaaca 14507431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 15530460 - 15530378
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||||||||   |||||||||||||||||| |||||  ||||||||||||||    
T  15530460 atacttttactataaatatagaccttgtatcagagtaaactgggagatagagggggctgaagcaagggcttagaatggcaaca 15530378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 28241658 - 28241577
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  28241658 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaaaggcaaca 28241577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 316 - 472
Target Start/End: Original strand, 30443022 - 30443195
Alignment:
Q  316 tgactcaaaattt--gatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatttt-----------------gtgctgaaaata 396  Q
    |||||||||||||  |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||                  |||||||||||    
T  30443022 tgactcaaaatttatgatggatgaagaatattgttgttaaaaatataagagatttgtttcaaatatattttttgcttccagaagattgttgctgaaaata 30443121  T
Q  397 tatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    ||||||||||||  |||||||| |||||||||||| ||| | |||||||||||||| |||||| ||| | ||||||    
T  30443122 tatttatggaca--aaatatatgtttgtaccgtataaaggaagatttgatgcaaatgtatttttaaaagaaatatt 30443195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 3234065 - 3233995
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  3234065 cttttactataaatatagac-ttgtatcagtgtaaaccttaagatagagggggctgaaacaaggatttagaa 3233995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 8995455 - 8995537
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| |||  ||||||||||||   ||||||||||||||| |||||||| ||||||| |||||||    
T  8995455 atacttttactataaatatagatcttgtatcagagtaaactgagagatagagggggctaaaacaagggtttagaaaggcaaca 8995537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 9019902 - 9019984
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||| |||  ||||||||||||   ||||||||||||||| |||||||| ||||||| |||||||    
T  9019902 atacttttactataaatatagatcttgtatcagagtaaactgagagatagagggggctaaaacaagggtttagaaaggcaaca 9019984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 560 - 637
Target Start/End: Complemental strand, 3632271 - 3632194
Alignment:
Q  560 tttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| ||  ||||| |||||||||||||||||||| | |||||||||| ||||||| |||||||    
T  3632271 tttactataaatatagacattgtatcagtgtaaaccttgagatagagggagttgaaacaagggtttagaaaggcaaca 3632194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 11983365 - 11983285
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||| |  |||||| |||||||    
T  11983365 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaaaggcttagaaaggcaaca 11983285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 565 - 637
Target Start/End: Complemental strand, 14459093 - 14459021
Alignment:
Q  565 tataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||  ||||||| |||| ||||||||||||||||||||| |||| ||||||| |||||||    
T  14459093 tataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaataagggtttagaaaggcaaca 14459021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 19227744 - 19227664
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| |||  ||||||| |||| |||||||| |||||||| |||||||| ||||||| |||||||    
T  19227744 acttttactataaatatagatcttgtatcagagcaaactttgagataaagggggctcaaacaagggtttagaaaggcaaca 19227664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 558 - 621
Target Start/End: Original strand, 22490618 - 22490681
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 621  Q
    ||||||| |||||||||||| || ||| || |||||||||||||||||||||||||||||||||    
T  22490618 cttttaccataaatatagacattgaattagtgtaaaccttgagatagagggggctgaaacaagg 22490681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 1230586 - 1230505
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  |||| || |||| ||||||||||| ||| |||||||||| ||||||| |||||||    
T  1230586 tactttcactataaatatagaccttgtatcatagcaaactttgagatagagagggttgaaacaagggtttagaaaggcaaca 1230505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 558 - 635
Target Start/End: Original strand, 13039733 - 13039810
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 635  Q
    |||||||||||||||||||  ||  ||||| ||||||||||||||| ||| ||||||||||||| ||||||| |||||    
T  13039733 cttttactataaatatagatattgtatcagtgtaaaccttgagatataggaggctgaaacaagggtttagaaaggcaa 13039810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 3630199 - 3630120
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||  ||||| ||||||||||||||||||||||||  | ||||||| |||||||    
T  3630199 cttttactataaatatagacattgtatcaatgtaaaacttgagatagagggggctgaaacatcggtttagaaaggcaaca 3630120  T

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Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 616
Target Start/End: Complemental strand, 3028188 - 3028127
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||||| | ||||||||||    
T  3028188 atacttttactataaatatagaccttgtatcaaagtaaaccatgagataaaaggggctgaaa 3028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 12186406 - 12186331
Alignment:
Q  556 tacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctg-aaacaaggatttagaa 629  Q
    ||||||||||||||||||| |||||  |||| | ||||||||||||||||| ||||||| |||||||| |||||||    
T  12186406 tacttttactataaatataaaccttgtatcacatgtaaaccttgagatagaaggggctgaaaacaagggtttagaa 12186331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 621
Target Start/End: Original strand, 15367000 - 15367085
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcaga-------gtaaaccttgagatagagggggctgaaacaagg 621  Q
    ||||||||||  ||||||||||||||||||||||| ||  ||||||       ||||||||||||||||||||||||||| |||||    
T  15367000 aatttatgagggatacttttactataaatatagacattgtatcagacatcggtgtaaaccttgagatagagggggctgaaccaagg 15367085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 590 - 629
Target Start/End: Original strand, 15719665 - 15719704
Alignment:
Q  590 taaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  15719665 taaaccttgagatagagggggctgaaacaagggtttagaa 15719704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 598 - 637
Target Start/End: Original strand, 26065005 - 26065044
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  26065005 gagatagagggggctgaaacaagggtttagaatggcaaca 26065044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 598 - 637
Target Start/End: Original strand, 26084974 - 26085013
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  26084974 gagatagagggggctgaaacaagggtttagaatggcaaca 26085013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 32279973 - 32280054
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||| ||||| |||||||||||  |||| ||||||| | |||||||| ||||||||||||||| |||| || |||||||    
T  32279973 atacttttcctatatatatagaccttgtatcatagtaaacttggagataga-ggggctgaaacaagggtttaaaaaggcaaca 32280054  T

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Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 558 - 639
Target Start/End: Original strand, 14466312 - 14466393
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaacagc 639  Q
    ||||||||||| |||||||| ||  || ||| ||||||||||||||||| ||| |||||||||  ||||||| | |||||||    
T  14466312 cttttactatagatatagactttgtattagaataaaccttgagatagagagggttgaaacaagagtttagaaagacaacagc 14466393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 637
Target Start/End: Complemental strand, 13870749 - 13870678
Alignment:
Q  565 tataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||| | ||  ||||||| ||||||||||||||| |||||||||| |||| ||||||| |||||||    
T  13870749 tataaatataggctttgtatcagagcaaaccttgagataga-ggggctgaaataagggtttagaaaggcaaca 13870678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 557 - 637
Target Start/End: Complemental strand, 20915694 - 20915612
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||  |||||  ||||  ||||||    |||||||||||||||||||| ||||||| |||||||    
T  20915694 acttttactataaatatagaccttgtatcaggctaaa--ttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 20915612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 598 - 637
Target Start/End: Complemental strand, 4816526 - 4816487
Alignment:
Q  598 gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  4816526 gagatagagggggctgaaacaagggtttagaaaggcaaca 4816487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 12158532 - 12158575
Alignment:
Q  320 tcaaaatttgatggatggagaatattgttgctaaaaatataaaa 363  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||    
T  12158532 tcaaaatttgatgaatgaagaagattgttgctaaaaatataaaa 12158575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 12161889 - 12161819
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||| ||||||||||| ||  ||||  ||||||||||||||| | ||||||||||||||| |||||||    
T  12161889 cttttactttaaatatagacattgtatcattgtaaaccttgagata-aaggggctgaaacaagggtttagaa 12161819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 555 - 606
Target Start/End: Complemental strand, 25466508 - 25466457
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 606  Q
    |||||||||||||||||||||| |||   ||||||||||||||||| |||||    
T  25466508 atacttttactataaatatagatcttttgtcagagtaaaccttgaggtagag 25466457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 558 - 608
Target Start/End: Original strand, 10584105 - 10584155
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagaggg 608  Q
    ||||||||||||||||| || ||  ||||| ||||||||||||||||||||    
T  10584105 cttttactataaatataaacattgtatcagtgtaaaccttgagatagaggg 10584155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 577
Target Start/End: Complemental strand, 28038066 - 28038021
Alignment:
Q  532 tattcgttccaaatttatgagttatacttttactataaatatagac 577  Q
    |||| ||||||| ||||||||  |||||||||||||||||||||||    
T  28038066 tatttgttccaattttatgagggatacttttactataaatatagac 28038021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 3833176 - 3833220
Alignment:
Q  340 aatattgttgctaaaaatataaaagatttgtttcaaatatatttt 384  Q
    |||||| |||||||||| |||||| |||||||| |||||||||||    
T  3833176 aatattattgctaaaaacataaaatatttgttttaaatatatttt 3833220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 629
Target Start/End: Original strand, 26945112 - 26945200
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatca-gagtaaaccttgagatagagggggctg-aaacaaggatttagaa 629  Q
    ||||||||||  || ||||||||||||||||| |||||  |||| |  |||||||||||||| ||||||| | |||||||| |||||||    
T  26945112 aatttatgaggaatgcttttactataaatataaaccttgtatcaggtataaaccttgagatatagggggccgaaaacaagggtttagaa 26945200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 235; Significance: 1e-129; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 307 - 637
Target Start/End: Original strand, 41382420 - 41382752
Alignment:
Q  307 gttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgga 406  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  41382420 gttgtagtatgactcaaaatttgatggatggagaatattgttgttaaaaatataaaagatttgtttcgaatatattttatactgaaaatatatttatgga 41382519  T
Q  407 caataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagga 506  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||| ||    
T  41382520 caataaatatatttttgtaccgtatgaacaacgatttgatgcaaatatattttgaaaggaaatattatattttttatgcaaatattctttcactgaatga 41382619  T
Q  507 g--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
    |           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41382620 gaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaaccttgagatag 41382719  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    | |||||| |||||||| ||||||||| |||||    
T  41382720 atggggctaaaacaagggtttagaatgacaaca 41382752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 41384493 - 41384823
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  41384493 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcgaatatattttatactgaaaatatatttatgg 41384592  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||    
T  41384593 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatat-ttttatgcaaatattctttcattgaagg 41384691  T
Q  506 -agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 604  Q
     |          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||    
T  41384692 aaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcaaagtaaaaattgagatag 41384791  T
Q  605 agggggctgaaacaaggatttagaatggcaaca 637  Q
    | ||||||||||||||| ||||||||| |||||    
T  41384792 a-ggggctgaaacaagggtttagaatgacaaca 41384823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 15808962 - 15809298
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15808962 tgttttagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaaaatatatttatgg 15809061  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  15809062 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 15809161  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 600  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||    
T  15809162 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 15809261  T
Q  601 atagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||| ||||||||||||||||| ||||||| |||||||    
T  15809262 ataaagggggctgaaacaagggtttagaaaggcaaca 15809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 305 - 629
Target Start/End: Original strand, 43529870 - 43530199
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43529870 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 43529969  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  43529970 gacaataaatatatttttgtattgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatattttttatgctaatattctttcactgaag 43530069  T
Q  505 gag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 599  Q
    |||          |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||    ||    
T  43530070 gagaaaaaaaaaagtatcttcagtgtggtatttattccaaatttatgagttatacttttactataaatatagaccttgtatcagagcaaactttgagaga 43530169  T
Q  600 gatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||||| |||||||    
T  43530170 gatagagggggctgaaacaagggtttagaa 43530199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 306 - 637
Target Start/End: Complemental strand, 28283813 - 28283475
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28283813 tgttgtagtatgactcaaaatttgatggatggagaatatttttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 28283714  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  28283713 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagtgaatattatatttttgatgcaaatattctttcactgaagg 28283614  T
Q  506 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 598  Q
    ||          |||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  28283613 agaaaaaaaaacgtatcttcagtgtaatatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 28283514  T
Q  599 agatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28283513 agatagagggggctgaaacaagggtttagaatggcaaca 28283475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 306 - 629
Target Start/End: Original strand, 3873750 - 3874081
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3873750 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 3873849  T
Q  406 acaataaatatatttttgtaccgtatgaag-aacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 504  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  3873850 acaataaatatatttttgtatcgtatgaagaaacgatttgatgcaaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaag 3873949  T
Q  505 gag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt---- 597  Q
    |||             ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  |||||  ||||| ||        
T  3873950 gagaaaaaaaaaaacatatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatatagactttgtatcaggctaaactttgaga 3874049  T
Q  598 gagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| |||||||||||||||| |||||||    
T  3874050 gagatagcgggggctgaaacaagggtttagaa 3874081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 306 - 629
Target Start/End: Original strand, 608470 - 608805
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  608470 tgttgtagtatcactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 608569  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||||||    
T  608570 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagagaatattatatattttatgcaaatattctttcactgaagg 608669  T
Q  506 ag-----nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--- 597  Q
    ||              |||||||| ||||| |||| ||||||||||||||||||||| ||| ||| ||||||||||||||| |||| || |||| ||       
T  608670 agaaaaaaaaaagaacgtatcttcggtgtgatatttgttccaaatttatgagttata-tttcactgtaaatatagaccttatatcatagcaaactttgag 608768  T
Q  598 -----gagatagagggggctgaaacaaggatttagaa 629  Q
         |||||||||||||||||||||||| |||||||    
T  608769 agagagagatagagggggctgaaacaagggtttagaa 608805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 305 - 464
Target Start/End: Original strand, 32339093 - 32339252
Alignment:
Q  305 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339093 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 32339192  T
Q  405 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaag 464  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32339193 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaag 32339252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 306 - 423
Target Start/End: Complemental strand, 3265752 - 3265635
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3265752 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 3265653  T
Q  406 acaataaatatatttttg 423  Q
    ||||||||||||| ||||    
T  3265652 acaataaatatatgtttg 3265635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 457 - 637
Target Start/End: Original strand, 181434 - 181616
Alignment:
Q  457 tttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggagnnnnnnnnn--gtatcttcagtgtggtattcgttccaaatttatgagtt 554  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||||||           ||||||||||||||||||||||||||||||||||||||    
T  181434 tttgaaagggaatattatatttttgatgcaaatattctttcactaaaggagaagaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagtt 181533  T
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  181534 atacttttactataaatatagactttgtatcagactaaactttgagatagagggggctgaaacaagggcttagaatggcaaca 181616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 517 - 637
Target Start/End: Original strand, 32339264 - 32339388
Alignment:
Q  517 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggct 612  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||||||||||||||    
T  32339264 gtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggct 32339363  T
Q  613 gaaacaaggatttagaatggcaaca 637  Q
    ||||||||| ||||||| |||||||    
T  32339364 gaaacaagggtttagaaaggcaaca 32339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 517 - 637
Target Start/End: Complemental strand, 24873563 - 24873437
Alignment:
Q  517 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------gagatagaggggg 610  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |||||||||||||    
T  24873563 gtatcttcagtgttgtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagaggggg 24873464  T
Q  611 ctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||| ||||||| |||||||    
T  24873463 ctgaaacaagggtttagaaaggcaaca 24873437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 14419541 - 14419447
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  14419541 aatttatgagtgatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 14419447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 13858834 - 13858740
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  13858834 aatttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggatgaaacaagggtttagaaaggcaaca 13858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 543 - 644
Target Start/End: Complemental strand, 35872728 - 35872627
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaacagctag 642  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  35872728 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaacaactag 35872629  T
Q  643 gg 644  Q
    ||    
T  35872628 gg 35872627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 4424015 - 4424097
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| |||||||  ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  4424015 atacttttactataaatacagaccttgtatcagagcaaactttgagatagagggggctgaaacaaggatttagaaaggcaaca 4424097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 14807748 - 14807830
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  14807748 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 14807830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 15072707 - 15072789
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  15072707 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 15072789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 44720842 - 44720922
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  44720842 acttttactataaatatagaccttatatcaaagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 44720922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 629
Target Start/End: Complemental strand, 2468436 - 2468362
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  2468436 atacttttactataaatatagaccttgtatcaaagtaaactttgagatagagggagctgaaacaaggatttagaa 2468362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 3886256 - 3886174
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||| ||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  3886256 atacttttactataaatatagactttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 3886174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 5623088 - 5622994
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||| || ||||||||||||||||||   ||  |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  5623088 aatttatgagtgattcttttactataaatataggttttgtatcagaataaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 5622994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 28251905 - 28251823
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||||||||||| ||| |||||||||| |||||||||||||||    
T  28251905 atacttttactataaatatagaccttgtatcatagtaaactttgagatagagtgggttgaaacaagggtttagaatggcaaca 28251823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 556 - 637
Target Start/End: Original strand, 26775199 - 26775280
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| | ||  ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  26775199 tacttttactataaatataggctttgtatcagagcaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 26775280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 27107232 - 27107153
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  |||||  |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  27107232 cttttactataaatatagacattgtatcagtataaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 27107153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 33541723 - 33541644
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| ||  ||||| |||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  33541723 cttttactataaatatagacattgtatcagtgtaaacattgagatagagggggctgaaacaagggtttagaaaggcaaca 33541644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 27826983 - 27827065
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  27826983 atacttttactataaatataggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 27827065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 27829294 - 27829376
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||| ||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  27829294 atacttttactataaatataggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 27829376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 629
Target Start/End: Original strand, 1225164 - 1225237
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| | ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  1225164 tacttttactataaatataggcattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 1225237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 15186066 - 15185974
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| ||||||||  |||||||||||||||||||| || ||  ||||||||||||||||||||| ||| | ||||||||||| |||||||    
T  15186066 gttccaattttatgagggatacttttactataaatataaactttgtatcagagtaaaccttgagataaaggtgactgaaacaagggtttagaa 15185974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 18810707 - 18810787
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| |||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  18810707 acttttactataaatatagatcttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 18810787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 386 - 472
Target Start/End: Complemental strand, 11701447 - 11701364
Alignment:
Q  386 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 472  Q
    |||||||||||||||||||| || |||||||||||||||||||||||  ||| || |||||| ||||||||||| ||||||||||||    
T  11701447 tgctgaaaatatatttatggtcagtaaatatatttttgtaccgtatg--gaa-gaattgatgtaaatatatttttaaagggaatatt 11701364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 316 - 387
Target Start/End: Complemental strand, 13986374 - 13986304
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtg 387  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  13986374 tgactcaaaattttatggatgaagaagattgttgctaaaaatat-aaagatttgttttaaatatattttgtg 13986304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 14477276 - 14477355
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||| | ||  ||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||    
T  14477276 cttttactataaatataggctttgtatcagagcaaaccttgagatagagggggttgaaacaagggtttagaaaggcaaca 14477355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 637
Target Start/End: Original strand, 25952521 - 25952600
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||  | ||  ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25952521 cttttactataaatataagctttgtatcagaggaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 25952600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 537 - 612
Target Start/End: Original strand, 31162192 - 31162267
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggct 612  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  31162192 gttccaattttatgagggatacttttactataaatatagaccttgtatcatagtaaaccttgagaaagagggggct 31162267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 559 - 637
Target Start/End: Original strand, 36865538 - 36865617
Alignment:
Q  559 ttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||| ||  |||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  36865538 ttttactataaatatagacattgtatcagatgtaaaccttaagatagagggggctgaaacaagggtttagaaaggcaaca 36865617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 543 - 637
Target Start/End: Complemental strand, 30480853 - 30480759
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||  || |||||||||||||||||||| ||  || || ||||||||||||||||| |||| |||||||||| ||||||| |||||||    
T  30480853 aatttatgagggatgcttttactataaatatagacattgtattagtgtaaaccttgagatagaaggggttgaaacaagggtttagaaaggcaaca 30480759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 18812892 - 18812972
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| |||  ||||||| |||| | |||||||||| ||||||||||||| ||||||| |||||||    
T  18812892 acttttactataaatatagatcttgtatcagagcaaacttggagatagaggaggctgaaacaagggtttagaaaggcaaca 18812972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 537 - 629
Target Start/End: Original strand, 27910994 - 27911086
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| |||||| |  |||||||||| |||||||| ||| ||  ||||  ||||||||||||||||||||||||||||||||| |||||||    
T  27910994 gttccaattttatgggagatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 27911086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 537 - 629
Target Start/End: Original strand, 27957413 - 27957505
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||| |||||| |  |||||||||| |||||||| ||| ||  ||||  ||||||||||||||||||||||||||||||||| |||||||    
T  27957413 gttccaattttatgggagatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 27957505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 316 - 387
Target Start/End: Complemental strand, 30679256 - 30679186
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtg 387  Q
    ||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||| | ||||||||||||    
T  30679256 tgactcaaaatttgatggatgaagaatat-gttggtaaaaataaaaaagatttgttttagatatattttgtg 30679186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 15067978 - 15068060
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| |||||  ||||   ||||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  15067978 atacttttactataaatataaaccttgtatcaacctaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 15068060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 12517364 - 12517280
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||| ||||| |||||  ||||||| |||| ||||||  |||||||||||||||||||| ||||||| |||||||    
T  12517364 atacttttactatatatatataccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaaaggcaaca 12517280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 589 - 637
Target Start/End: Complemental strand, 37214514 - 37214466
Alignment:
Q  589 gtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  37214514 gtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 37214466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 637
Target Start/End: Complemental strand, 5372512 - 5372434
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||| ||||||| ||  ||||| ||||| ||||||||||| ||||||||||||||| ||||||| |||||||    
T  5372512 cttttactataattatagacattgtatcagtgtaaatcttgagataga-ggggctgaaacaagggtttagaaaggcaaca 5372434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 460
Target Start/End: Complemental strand, 13986285 - 13986214
Alignment:
Q  389 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttg 460  Q
    |||||||||||||||||| | | |||| |||||||||||| |||||  | ||||||||||||||||||||||    
T  13986285 tgaaaatatatttatggatagttaataaatttttgtaccgcatgaaagaagatttgatgcaaatatattttg 13986214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 629
Target Start/End: Original strand, 21482322 - 21482393
Alignment:
Q  558 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||  ||  |||||||||||| ||||||||||| || ||||||||||| |||||||    
T  21482322 cttttactataaatatagaatttgtatcagagtaaactttgagatagagtggactgaaacaagggtttagaa 21482393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 601
Target Start/End: Original strand, 6375969 - 6376032
Alignment:
Q  538 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 601  Q
    |||||| |||||| |  ||||||||||||||||||||||||||  |||||||||||| ||||||    
T  6375969 ttccaattttatgcgggatacttttactataaatatagaccttgtatcagagtaaacattgaga 6376032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 586 - 629
Target Start/End: Original strand, 21480542 - 21480585
Alignment:
Q  586 agagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  21480542 agagtaaaccttgagatagatggggctgaaacaagggtttagaa 21480585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 14419834 - 14419784
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 606  Q
    ||||||| |||||||||||||| ||  ||||| ||||||||||||||||||    
T  14419834 tacttttgctataaatatagacattgtatcagggtaaaccttgagatagag 14419784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 589 - 629
Target Start/End: Complemental strand, 3005931 - 3005890
Alignment:
Q  589 gtaaaccttgagatagagggggct-gaaacaaggatttagaa 629  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  3005931 gtaaaccttgagatagagggggctggaaacaagggtttagaa 3005890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 387
Target Start/End: Complemental strand, 27820178 - 27820149
Alignment:
Q  358 ataaaagatttgtttcaaatatattttgtg 387  Q
    ||||||||||||||||||||||||||||||    
T  27820178 ataaaagatttgtttcaaatatattttgtg 27820149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 11701479 - 11701435
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatata 360  Q
    ||||||||||||||||||| | |||| ||||||||| ||||||||    
T  11701479 tgactcaaaatttgatggacgaagaagattgttgctgaaaatata 11701435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 306 - 637
Target Start/End: Original strand, 1735 - 2074
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1735 tgttgtagtatgactcaaaatttgaaggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 1834  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 505  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  1835 acaataaatatatttttgtatcgtatgaaggaagatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatattctttcactgaagg 1934  T
Q  506 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttg----- 598  Q
    ||           ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||   ||| || |||| |||         
T  1935 agaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttataagttatactttcactataaatatagaccttgtttcatagcaaactttgagaga 2034  T
Q  599 -agatagagggggctgaaacaaggatttagaatggcaaca 637  Q
     ||||| ||||||||||||||||| ||||||| |||||||    
T  2035 aagatatagggggctgaaacaagggtttagaaaggcaaca 2074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 115; Significance: 4e-58; HSPs: 3)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 307 - 421
Target Start/End: Complemental strand, 2184 - 2070
Alignment:
Q  307 gttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgga 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2184 gttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgga 2085  T
Q  407 caataaatatatttt 421  Q
    |||||||||||||||    
T  2084 caataaatatatttt 2070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 507
Target Start/End: Complemental strand, 2080 - 2022
Alignment:
Q  449 aaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 507  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  2080 aaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaaggag 2022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 518 - 629
Target Start/End: Complemental strand, 2004 - 1895
Alignment:
Q  518 tatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaa 616  Q
    ||||||||| ||| ||| | ||||||||||| |||||| | ||   || ||||||||||||||  |||||| |||||||| |||||||||| ||||||||    
T  2004 tatcttcagcgtgatatccattccaaatttacgagttacattt---ctctaaatatagaccttgtatcagatgtaaacctagagatagaggtggctgaaa 1908  T
Q  617 caaggatttagaa 629  Q
    ||||| |||||||    
T  1907 caagggtttagaa 1895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 113; Significance: 7e-57; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 306 - 454
Target Start/End: Original strand, 4546 - 4694
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 405  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  4546 tgttgcagtataactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcgaatatatttcgtgctgaaaatatatttatgg 4645  T
Q  406 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatat 454  Q
    |||||| |||||||||||||| |||||||| || |||||||||||||||    
T  4646 acaatatatatatttttgtactgtatgaaggacaatttgatgcaaatat 4694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 517 - 629
Target Start/End: Original strand, 4727 - 4839
Alignment:
Q  517 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aa 615  Q
    |||||||||||||| |||||||| ||||||||||||||||| || | |||||||||||||||||  ||||||||||||||||||||||||||| ||| ||    
T  4727 gtatcttcagtgtgatattcgtttcaaatttatgagttatatttct-ctataaatatagaccttgtatcagagtaaaccttgagatagaggggtctgaaa 4825  T
Q  616 acaaggatttagaa 629  Q
    | ||||||||||||    
T  4826 aaaaggatttagaa 4839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 95 - 1
Alignment:
Q  306 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatt 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  95 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 3947 - 4029
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  3947 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 637
Target Start/End: Original strand, 14969 - 15051
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||    
T  14969 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaatgatttagaaaggcaaca 15051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 557 - 637
Target Start/End: Original strand, 2832 - 2912
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  2832 acttttactataaatatagaacttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 2912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 537 - 629
Target Start/End: Complemental strand, 16174 - 16082
Alignment:
Q  537 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||  ||||||||||||||||||||||  ||  ||||||||||||||| |||||||||||| ||||| |||| |||||||    
T  16174 gttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagatagagggggttgaaataagggtttagaa 16082  T

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Target: scaffold0008 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 389 - 459
Target Start/End: Complemental strand, 57905 - 57836
Alignment:
Q  389 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatatttt 459  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  57905 tgaaaatatatgtatgaacaataaatatatttttgtaccgtatgaagaa-aatttgatgcaaatatatttt 57836  T

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Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 387
Target Start/End: Complemental strand, 57995 - 57926
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtg 387  Q
    |||||||||||||||||||||  ||||  |||| |||||| |||||||||||||||| | |||| |||||||    
T  57995 tgactcaaaatttgatggatgatgaat--tgtttctaaaagtataaaagatttgttttatatattttttgtg 57926  T

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Target: scaffold0552 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 1168 - 1087
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  1168 tactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 1087  T

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Target: scaffold0038 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 41820 - 41739
Alignment:
Q  556 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||| ||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  41820 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaaaggcaaca 41739  T

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Target: scaffold0472 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 557 - 629
Target Start/End: Original strand, 6151 - 6223
Alignment:
Q  557 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||||||||||||||||  |||| || |||| |||||||||||||||||||||||||| |||||||    
T  6151 acttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 6223  T

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Target: scaffold0004 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 543 - 629
Target Start/End: Original strand, 79797 - 79883
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 629  Q
    ||||||||||  || ||||||||||||||||||   ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  79797 aatttatgagggattcttttactataaatatagtttttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 79883  T

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Target: scaffold0025 (Bit Score: 46; Significance: 7e-17; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 69633 - 69547
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||||||    |||||||||||||||||||| ||||||| |||||||    
T  69633 atacttttacaataaatatagaccttatatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 69547  T

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Target: scaffold0025; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 637
Target Start/End: Complemental strand, 73365 - 73279
Alignment:
Q  555 atacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 637  Q
    |||||||||||||||||||||||| |  |||| || |||| ||    |||||||||||||||||||||||| ||||||| |||||||    
T  73365 atacttttactataaatatagaccgtgtatcaaaggaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 73279  T

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Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 559 - 616
Target Start/End: Complemental strand, 16981 - 16924
Alignment:
Q  559 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 616  Q
    ||||| |||||||||| |||||  ||||||||||||||||||||||||| ||||||||    
T  16981 ttttaatataaatataaaccttgtatcagagtaaaccttgagatagaggaggctgaaa 16924  T

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Target: scaffold0533 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 343 - 384
Target Start/End: Complemental strand, 2273 - 2232
Alignment:
Q  343 attgttgctaaaaatataaaagatttgtttcaaatatatttt 384  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  2273 attgttgcagaaaatataaaagatttgtttcaaatatatttt 2232  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 626
Target Start/End: Original strand, 85169 - 85251
Alignment:
Q  543 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 626  Q
    ||||||||||  || |||||||||||||||||| | ||  |||| |||||||||||||||||| | ||  ||||||||||||||    
T  85169 aatttatgagggattcttttactataaatataggctttgtatcaaagtaaaccttgagatagaagagg-agaaacaaggattta 85251  T

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Target: scaffold0474 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 316 - 366
Target Start/End: Original strand, 10443 - 10493
Alignment:
Q  316 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagat 366  Q
    ||||||||||||||||||||  | || ||||||| ||||||||||||||||    
T  10443 tgactcaaaatttgatggataaaaaagattgttgttaaaaatataaaagat 10493  T

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