View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1111_low_53 (Length: 416)

Name: NF1111_low_53
Description: NF1111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1111_low_53
NF1111_low_53
[»] chr3 (32 HSPs)
chr3 (272-361)||(49628149-49628239)
chr3 (272-361)||(3456921-3457010)
chr3 (272-361)||(4206573-4206662)
chr3 (272-361)||(36691861-36691950)
chr3 (272-361)||(11819061-11819150)
chr3 (272-361)||(30156344-30156432)
chr3 (276-361)||(31270308-31270393)
chr3 (272-361)||(31462808-31462897)
chr3 (272-361)||(13702034-13702123)
chr3 (272-361)||(14585440-14585529)
chr3 (272-361)||(34960920-34961009)
chr3 (272-361)||(48652502-48652591)
chr3 (272-361)||(53155492-53155581)
chr3 (274-361)||(54239080-54239167)
chr3 (272-354)||(1074962-1075044)
chr3 (287-361)||(35174697-35174771)
chr3 (276-361)||(32080816-32080901)
chr3 (272-361)||(48400877-48400966)
chr3 (272-361)||(27189456-27189545)
chr3 (272-361)||(36624756-36624845)
chr3 (278-355)||(53402614-53402691)
chr3 (272-361)||(39610182-39610279)
chr3 (290-361)||(22484961-22485032)
chr3 (288-361)||(40013334-40013410)
chr3 (276-361)||(19645203-19645288)
chr3 (272-361)||(55090645-55090734)
chr3 (288-361)||(24483740-24483813)
chr3 (272-361)||(38527241-38527330)
chr3 (274-358)||(40883933-40884018)
chr3 (323-361)||(41868356-41868394)
chr3 (309-361)||(4817892-4817944)
chr3 (277-327)||(48854889-48854939)
[»] chr8 (29 HSPs)
chr8 (272-361)||(37612631-37612720)
chr8 (274-361)||(41361712-41361799)
chr8 (276-361)||(10338884-10338969)
chr8 (272-361)||(31407810-31407899)
chr8 (272-360)||(2025272-2025360)
chr8 (291-361)||(2234532-2234602)
chr8 (272-361)||(24791230-24791319)
chr8 (272-361)||(10147924-10148014)
chr8 (272-361)||(30026942-30027031)
chr8 (272-361)||(39067751-39067840)
chr8 (272-360)||(1810283-1810370)
chr8 (309-361)||(37128548-37128600)
chr8 (291-361)||(23971156-23971226)
chr8 (277-361)||(9501572-9501657)
chr8 (272-361)||(14600760-14600849)
chr8 (287-361)||(1039955-1040029)
chr8 (288-361)||(12329620-12329693)
chr8 (276-361)||(31202440-31202525)
chr8 (272-360)||(11161860-11161948)
chr8 (313-361)||(31308167-31308215)
chr8 (278-356)||(30039399-30039476)
chr8 (272-361)||(13570788-13570877)
chr8 (288-361)||(3204818-3204890)
chr8 (307-356)||(7281658-7281707)
chr8 (272-336)||(7583851-7583915)
chr8 (276-361)||(24699812-24699899)
chr8 (272-339)||(13576260-13576326)
chr8 (302-358)||(15288863-15288919)
chr8 (302-358)||(15469232-15469288)
[»] chr4 (46 HSPs)
chr4 (274-361)||(31521962-31522049)
chr4 (272-361)||(43244435-43244524)
chr4 (273-360)||(394329-394416)
chr4 (272-361)||(7060302-7060391)
chr4 (272-361)||(22757072-22757161)
chr4 (274-361)||(51152105-51152192)
chr4 (274-361)||(8712510-8712597)
chr4 (287-361)||(13965553-13965627)
chr4 (272-361)||(24825627-24825716)
chr4 (272-361)||(29268831-29268920)
chr4 (272-361)||(44757096-44757185)
chr4 (287-361)||(38944201-38944275)
chr4 (272-361)||(478066-478154)
chr4 (272-361)||(24568767-24568856)
chr4 (272-361)||(6911658-6911747)
chr4 (272-361)||(11210367-11210456)
chr4 (272-361)||(24100117-24100206)
chr4 (276-361)||(26674354-26674439)
chr4 (276-361)||(26742517-26742602)
chr4 (287-361)||(7083870-7083944)
chr4 (272-361)||(24611853-24611942)
chr4 (272-361)||(25658145-25658234)
chr4 (274-355)||(27394810-27394891)
chr4 (272-361)||(30202016-30202105)
chr4 (308-361)||(43493341-43493394)
chr4 (289-361)||(7861259-7861331)
chr4 (276-356)||(22049464-22049543)
chr4 (287-357)||(20399961-20400031)
chr4 (272-361)||(39837572-39837662)
chr4 (274-361)||(19745369-19745456)
chr4 (274-361)||(19794350-19794437)
chr4 (272-361)||(29922812-29922904)
chr4 (291-361)||(50801214-50801284)
chr4 (296-361)||(6881958-6882023)
chr4 (277-361)||(5814330-5814414)
chr4 (287-361)||(45351124-45351200)
chr4 (287-361)||(45360603-45360679)
chr4 (307-361)||(2447813-2447867)
chr4 (318-360)||(39523433-39523475)
chr4 (272-361)||(7084184-7084273)
chr4 (287-360)||(20887810-20887883)
chr4 (288-356)||(12717177-12717244)
chr4 (274-358)||(42197533-42197616)
chr4 (289-339)||(28837072-28837120)
chr4 (272-354)||(626609-626690)
chr4 (283-361)||(36124401-36124479)
[»] chr7 (38 HSPs)
chr7 (275-361)||(17473777-17473863)
chr7 (275-361)||(17579351-17579437)
chr7 (272-361)||(21603441-21603529)
chr7 (272-361)||(36579366-36579455)
chr7 (274-361)||(9785297-9785384)
chr7 (272-361)||(11832996-11833086)
chr7 (276-361)||(28664966-28665051)
chr7 (272-361)||(42603823-42603912)
chr7 (272-361)||(45457610-45457699)
chr7 (274-361)||(5684345-5684432)
chr7 (274-361)||(5709395-5709482)
chr7 (272-361)||(21990639-21990729)
chr7 (272-361)||(17509258-17509346)
chr7 (272-361)||(17543868-17543956)
chr7 (272-361)||(46026083-46026172)
chr7 (272-357)||(48304453-48304538)
chr7 (288-361)||(32740746-32740820)
chr7 (276-361)||(1281191-1281276)
chr7 (272-361)||(27535434-27535523)
chr7 (276-361)||(39533029-39533114)
chr7 (272-361)||(45482042-45482131)
chr7 (274-361)||(22747562-22747648)
chr7 (272-361)||(6667373-6667463)
chr7 (276-361)||(10574363-10574448)
chr7 (272-361)||(42644654-42644743)
chr7 (307-361)||(43847083-43847137)
chr7 (288-357)||(2622586-2622655)
chr7 (272-361)||(3266360-3266455)
chr7 (314-361)||(10094461-10094508)
chr7 (315-361)||(15674666-15674712)
chr7 (272-361)||(41287935-41288025)
chr7 (272-331)||(40761567-40761626)
chr7 (287-361)||(24320277-24320351)
chr7 (276-328)||(36719628-36719680)
chr7 (276-356)||(39707272-39707351)
chr7 (272-326)||(17221643-17221696)
chr7 (288-357)||(4621425-4621494)
chr7 (321-361)||(14657877-14657917)
[»] scaffold0312 (1 HSPs)
scaffold0312 (272-361)||(6115-6204)
[»] chr6 (20 HSPs)
chr6 (272-361)||(14783225-14783314)
chr6 (272-361)||(21507862-21507951)
chr6 (272-361)||(15590133-15590222)
chr6 (272-361)||(6419912-6420001)
chr6 (272-361)||(8693711-8693803)
chr6 (272-361)||(12481424-12481513)
chr6 (276-361)||(31937473-31937557)
chr6 (272-361)||(23654228-23654317)
chr6 (278-347)||(29927447-29927516)
chr6 (272-336)||(4084996-4085060)
chr6 (272-361)||(2304864-2304953)
chr6 (278-355)||(15175797-15175873)
chr6 (278-355)||(15470295-15470371)
chr6 (273-361)||(19402862-19402950)
chr6 (273-361)||(35219958-35220045)
chr6 (274-361)||(4921935-4922023)
chr6 (302-361)||(4393778-4393837)
chr6 (272-361)||(6296303-6296395)
chr6 (272-361)||(6303113-6303205)
chr6 (317-361)||(31937585-31937629)
[»] chr2 (40 HSPs)
chr2 (272-361)||(5754266-5754355)
chr2 (272-359)||(43474184-43474271)
chr2 (272-361)||(11937912-11938002)
chr2 (272-361)||(12704665-12704754)
chr2 (272-361)||(17268178-17268267)
chr2 (276-361)||(27095687-27095772)
chr2 (276-361)||(44942267-44942352)
chr2 (287-361)||(34416815-34416889)
chr2 (272-361)||(9690027-9690116)
chr2 (272-361)||(15919852-15919941)
chr2 (272-361)||(20561186-20561275)
chr2 (272-361)||(22597113-22597202)
chr2 (272-361)||(18089446-18089535)
chr2 (272-361)||(25067830-25067919)
chr2 (276-361)||(33012059-33012144)
chr2 (273-357)||(13740718-13740801)
chr2 (272-360)||(38384497-38384585)
chr2 (272-361)||(9978723-9978812)
chr2 (288-361)||(31908870-31908943)
chr2 (272-361)||(36867986-36868075)
chr2 (272-361)||(38535359-38535448)
chr2 (272-360)||(34963121-34963208)
chr2 (289-361)||(35333500-35333572)
chr2 (272-359)||(7073004-7073091)
chr2 (307-361)||(28231151-28231205)
chr2 (276-361)||(4604361-4604446)
chr2 (272-336)||(32015198-32015262)
chr2 (287-361)||(10287060-10287133)
chr2 (273-361)||(4739310-4739396)
chr2 (287-361)||(34470957-34471033)
chr2 (272-361)||(13879060-13879157)
chr2 (272-361)||(14019185-14019282)
chr2 (276-336)||(28261972-28262032)
chr2 (314-361)||(4426712-4426759)
chr2 (314-361)||(32314462-32314509)
chr2 (325-361)||(4732102-4732138)
chr2 (288-356)||(17767611-17767678)
chr2 (276-331)||(17116490-17116544)
chr2 (278-356)||(11798576-11798653)
chr2 (272-316)||(12891188-12891232)
[»] chr1 (28 HSPs)
chr1 (272-361)||(424345-424434)
chr1 (272-361)||(7995614-7995703)
chr1 (274-361)||(32784088-32784175)
chr1 (276-361)||(3232770-3232855)
chr1 (272-357)||(33487088-33487173)
chr1 (272-361)||(12871599-12871688)
chr1 (276-361)||(14265266-14265351)
chr1 (272-361)||(28678184-28678273)
chr1 (272-361)||(42490871-42490960)
chr1 (276-361)||(20411555-20411640)
chr1 (272-361)||(27534677-27534766)
chr1 (276-357)||(29205267-29205348)
chr1 (289-361)||(37822399-37822471)
chr1 (288-361)||(4882413-4882486)
chr1 (307-361)||(44517160-44517214)
chr1 (272-361)||(18343592-18343681)
chr1 (272-335)||(33939082-33939145)
chr1 (272-361)||(45193680-45193769)
chr1 (57-127)||(49325940-49326010)
chr1 (276-361)||(4871080-4871165)
chr1 (276-361)||(13488590-13488675)
chr1 (287-360)||(17347592-17347664)
chr1 (272-361)||(42276335-42276423)
chr1 (272-361)||(45750456-45750545)
chr1 (134-191)||(49324400-49324457)
chr1 (311-356)||(9298474-9298519)
chr1 (320-361)||(51418040-51418080)
chr1 (321-361)||(29726650-29726690)
[»] chr5 (27 HSPs)
chr5 (278-360)||(17699537-17699619)
chr5 (272-361)||(17331306-17331395)
chr5 (272-361)||(6281022-6281111)
chr5 (276-361)||(27241046-27241131)
chr5 (272-361)||(28040607-28040696)
chr5 (272-361)||(33164522-33164611)
chr5 (272-361)||(43493850-43493939)
chr5 (272-361)||(32347768-32347858)
chr5 (277-361)||(42609127-42609211)
chr5 (274-361)||(29097769-29097856)
chr5 (272-355)||(26295118-26295201)
chr5 (291-357)||(12439692-12439757)
chr5 (272-361)||(17096293-17096385)
chr5 (272-333)||(7771888-7771949)
chr5 (277-361)||(178160-178244)
chr5 (272-361)||(6635227-6635317)
chr5 (287-361)||(34431053-34431127)
chr5 (307-361)||(39179882-39179936)
chr5 (276-361)||(39531457-39531540)
chr5 (276-361)||(981079-981164)
chr5 (272-361)||(3740336-3740424)
chr5 (273-361)||(20483165-20483253)
chr5 (306-361)||(3079359-3079414)
chr5 (272-361)||(23882170-23882259)
chr5 (314-361)||(17687225-17687272)
chr5 (287-361)||(42396566-42396640)
chr5 (324-361)||(12891706-12891743)
[»] scaffold1379 (2 HSPs)
scaffold1379 (272-361)||(1140-1229)
scaffold1379 (320-361)||(1-42)
[»] scaffold0155 (1 HSPs)
scaffold0155 (277-361)||(35065-35149)
[»] scaffold0056 (1 HSPs)
scaffold0056 (289-361)||(74159-74231)
[»] scaffold0536 (1 HSPs)
scaffold0536 (272-361)||(2878-2969)
[»] scaffold0321 (1 HSPs)
scaffold0321 (294-361)||(7178-7245)
[»] scaffold0001 (1 HSPs)
scaffold0001 (272-361)||(404312-404401)
[»] scaffold0432 (1 HSPs)
scaffold0432 (274-361)||(2471-2557)
[»] scaffold0121 (1 HSPs)
scaffold0121 (272-360)||(13300-13392)
[»] scaffold0580 (2 HSPs)
scaffold0580 (278-355)||(840-915)
scaffold0580 (278-355)||(8579-8654)


Alignment Details
Target: chr3 (Bit Score: 71; Significance: 5e-32; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 49628239 - 49628149
Alignment:
Q  272 agaggggtgatttttgg-tcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49628239 agaggggtgatttttgggtcaattttgacctaaaaatcacccctctgaattgtttttccttctatcctagttgaataagtgatttcacata 49628149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 3456921 - 3457010
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| ||||||||||||| | |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  3456921 agaggggtgatttatggtcaattttgatccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttaacata 3457010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 4206662 - 4206573
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||    
T  4206662 agaggggtgatttatggtcaattttgatcaaaaaatcacccctccgaattgtttttccatatatcctaattgaataagtgttttcacata 4206573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 36691950 - 36691861
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  36691950 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttatttttccttctatcctaattgaataagtgatttcacata 36691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 11819061 - 11819150
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||| ||||||||||||||| | || |||||||||||||||||||||    
T  11819061 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 11819150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 30156432 - 30156344
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||    
T  30156432 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattg-ttttccttttatcctaattgaataagtgatttcacata 30156344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 31270308 - 31270393
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| |||| |||||||| |||||| ||||||||||||||||| |||||||||||||||||||||    
T  31270308 gggtgatttagggtcaattttgacccaaaaatcaccccttcgaattatttttccttctatcctaattgaataagtgatttcacata 31270393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 31462897 - 31462808
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||| |||||||||||||||| ||||||| ||||||||||||||| |||||    
T  31462897 agaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgattttacata 31462808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 13702123 - 13702034
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||| |||||| |||||| ||||||| || |||||||||||||||||||||    
T  13702123 agaggggtgatttagggtcaattttgacccaaaagtcaccccttcgaattatttttctttctatcataattgaataagtgatttcacata 13702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 14585440 - 14585529
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||   ||||||||||||| |||| |||| ||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  14585440 agaggggtgatttagagtcaattttgacccaaaaatcactcctctaaattgtttttccttctatcctaattgaataagtgatttcacata 14585529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 34961009 - 34960920
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||| ||  |||||||||||||| |||| ||||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||    
T  34961009 agaggggtgacttagggtcaattttgacccaaaaatcacccctcagaattgttttttcttctattctaattgaataagtgatttcacata 34960920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 48652591 - 48652502
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||| ||||||| |||| |||||||||||| ||||||||||||||| | || |||||||||||||||||||||    
T  48652591 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 48652502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 53155581 - 53155492
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||| | |||||||||||||||| ||||||| || ||||||||||||||||||    
T  53155581 agaggggtgatttagggtcaattttgacccaaaaatcacccattcgaattgtttttccttatatcctaattcaataagtgatttcacata 53155492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 54239167 - 54239080
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  ||| || ||||| |||||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  54239167 aggggtgatttaaggttaaatttgatcaaaaaatcacacatccgaattgtttttccttctatcctaattgaataagtgatttcacata 54239080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 1075044 - 1074962
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatt 354  Q
    ||||||||||||| ||||||||||||||| |||| |||||| ||||| |||||||||||| ||| ||| ||||||||||||||    
T  1075044 agaggggtgatttatggtcaattttgacccaaaaatcacccatccgagttgtttttccttatattctaattgaataagtgatt 1074962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 35174697 - 35174771
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||| |||| |||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  35174697 ggtcaatttcgacccaaaaatcacccctttgaattgtttttccttctatcctaattgaataagtgatttcacata 35174771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 32080901 - 32080816
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| |||| |||||||||||| ||||||||||||||| | || ||||||| |||||||||||||    
T  32080901 gggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataggtgatttcacata 32080816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 48400877 - 48400966
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||| | || |||||||||||||||||| |||| || ||||||||||||||||||    
T  48400877 agaggggtgatttagggtcaattttgacccaaaaatcacacatcggaattgtttttccttctaccctattttaataagtgatttcacata 48400966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 27189545 - 27189456
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||   ||||||||||| | |||| | || | |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  27189545 agaggggtgatttagagtcaattttgatccaaaaattactcttccgaattgtttttccttctatcctaattgaataagtaatttcacata 27189456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 36624845 - 36624756
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||   |||||||  ||||| |||| |||||| ||||||||||||||||||||||||||  | ||||||||||||||||||    
T  36624845 agaggggtgattcagggtcaatcatgacccaaaaatcacccatccgaattgtttttccttctatcctaactaaataagtgatttcacata 36624756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 355
Target Start/End: Original strand, 53402614 - 53402691
Alignment:
Q  278 gtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgattt 355  Q
    |||||||  |||||||||||||| |||| |||||| |||||||||||||||||||||| ||| || ||||||||||||    
T  53402614 gtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttccttctattctaattcaataagtgattt 53402691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 39610182 - 39610279
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttt--------ttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| ||||||||||||||| || | |||||||||||| ||||||        |||||||||||||| |||||||||||||||||||||    
T  39610182 agaggggtgatttatggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacata 39610279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 361
Target Start/End: Original strand, 22484961 - 22485032
Alignment:
Q  290 caattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||| |||| |||| | |||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  22484961 caattttgacccaaaaatcactcttccggattgtttttccttctatcctaattgaataagtgatttcgcata 22485032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 40013410 - 40013334
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttcta---tcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| |||| |||||| | |||||||||||||||||||   ||||| |||||||||||||||||||||    
T  40013410 gtcaattttgacccaaaaatcacccattcgaattgtttttccttctatcctcctaattgaataagtgatttcacata 40013334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 19645203 - 19645288
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| ||||  || || |||||||||||||| ||||| ||||| || ||||||||||||||||||    
T  19645203 gggtgatttagggtcaattttgacctaaaaaccatccatccgaattgttttttcttctgtcctaattaaataagtgatttcacata 19645288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 55090734 - 55090645
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  ||| |||||  ||| |||| |||||||||||| ||||||||||||||| | || || ||||||||||||||||||    
T  55090734 agaggggtgatttagggttaatttcaacccaaaaatcacccctccgatttgtttttccttctaccttaattaaataagtgatttcacata 55090645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 24483813 - 24483740
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||  | || |||||| || |||||||||||| ||||||| || |||||||||||||||||||||    
T  24483813 gtcaattttgacacacaaatcacccatctgaattgtttttcattctatcataattgaataagtgatttcacata 24483740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 38527241 - 38527330
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  | ||||| |||| | |||| |||| | ||| ||||||||||||||||||| || |||||||| ||||||||||||    
T  38527241 agaggggtgatttaggatcaatcttgaaccaaaaatcacacatccaaattgtttttccttctatcttaattgaataaatgatttcacata 38527330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 358
Target Start/End: Complemental strand, 40884018 - 40883933
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttttt-ccttctatcctagttgaataagtgatttcac 358  Q
    |||||||||||  |||||||||||||| |||| ||| |  | |||||||||||| |||| ||||||| ||||||||||||||||||    
T  40884018 aggggtgatttagggtcaattttgacccaaaaatcatcaattcgaattgttttttccttttatcctaattgaataagtgatttcac 40883933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 41868394 - 41868356
Alignment:
Q  323 tttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  41868394 tttttccttctatcctaattgaataagtgatttcacata 41868356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 4817944 - 4817892
Alignment:
Q  309 acccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||| ||||||||||| || ||||||| ||||||| |||||||||||||    
T  4817944 acccctccaaattgtttttctttttatcctaattgaataggtgatttcacata 4817892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 48854889 - 48854939
Alignment:
Q  277 ggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttttt 327  Q
    ||||||||| |||||||||| ||| |||| |||||||||||| ||||||||    
T  48854889 ggtgattttgggtcaattttaacccaaaaatcacccctccgatttgttttt 48854939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 37612631 - 37612720
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37612631 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattttttttccttctatcctagttgaataagtgatttcacata 37612720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 41361712 - 41361799
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||| ||||||||||||||| | || |||||||||||||||||||||    
T  41361712 aggggtgatttatggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccgtaattgaataagtgatttcacata 41361799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 10338969 - 10338884
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||  |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10338969 gggtgatttaaggtcaattttgacgcaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 10338884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 31407899 - 31407810
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  31407899 agaggggtgatttagggtcaattttgacccaaaaatcatctctccgaattgtttttccttctatcatagttgaataaatgatttcacata 31407810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 2025360 - 2025272
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||| ||| ||| ||||||||||||||||||||    
T  2025360 agaggggtgatttatggtcaattttgaccaaaaaatcacccttccaagttgtttttccttttattctaattgaataagtgatttcacat 2025272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 2234602 - 2234532
Alignment:
Q  291 aattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2234602 aattttgatccaaaaatcaccccttcgaattgtttttccttctatcctagttgaataagtgatttcacata 2234532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 24791319 - 24791230
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| ||||||||||||||| |||| ||| || |||||||||||||||||| ||||||| || |||||||||||| |||||    
T  24791319 agaggggtgatttatggtcaattttgacccaaaaatcatccatccgaattgtttttccttatatcctaattcaataagtgatttaacata 24791230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 10147924 - 10148014
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattg-tttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| || | |||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||    
T  10147924 agaggggtgatttagggtcaattttgacccaataatcacccctccgagttgtttttttcttctatcctaattgaataagtgatttcacata 10148014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 30027031 - 30026942
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  ||||| |||||||| |||| |||||| ||||| |||||||| |||||||| || |||||||||||||||||||||    
T  30027031 agaggggtgatttagggtcatttttgacccaaaaatcacccatccgagttgttttttcttctatcataattgaataagtgatttcacata 30026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 39067840 - 39067751
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||||   ||| |||||||||||||||||||||| || ||||||||||||||||||    
T  39067840 agaggggtgatttaaggtcaattttgacccaaaaatcactgttccaaattgtttttccttctatcctaatttaataagtgatttcacata 39067751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 1810370 - 1810283
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||| ||| ||||| ||||||||||| || |||||||||||||||||    
T  1810370 agaggggtgatttagggtcaattttgacccaaaaatcacccctccg-atttttttttcttctatcctaattcaataagtgatttcacat 1810283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 37128600 - 37128548
Alignment:
Q  309 acccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37128600 acccatccgaattgtttttccttctatcctagttgaataagtgatttcacata 37128548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 23971226 - 23971156
Alignment:
Q  291 aattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||| |||| | ||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  23971226 aattttgaccaaaaaatcactcatccgagttgtttttccttctattctaattgaataagtgatttcacata 23971156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 9501572 - 9501657
Alignment:
Q  277 ggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttt-tccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||  |||||||||||| | |||| |||||| || |||||||||| ||||||||||||| |||||||||||||||||||||    
T  9501572 ggtgatttagggtcaattttgatccaaaaatcacccatctgaattgttttttccttctatcctaattgaataagtgatttcacata 9501657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 14600849 - 14600760
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||| ||||||||  |||||||||||||| |||| ||| || ||||| |||||||| ||||||||||| |||||||| ||||||||||||    
T  14600849 agagaggtgatttagggtcaattttgacccaaaaatcatccatccgagttgttttttcttctatcctaattgaataactgatttcacata 14600760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 1040029 - 1039955
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||| | |||| |||||| ||||||||| |||||||||||| ||| || ||||||||||||||||||    
T  1040029 ggtcaattttgatccaaaaatcacccatccgaattggttttccttctattctaattcaataagtgatttcacata 1039955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 361
Target Start/End: Original strand, 12329620 - 12329693
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||| | |||| |||||  | |||||||||||||||| ||||||| |||||||||||||||||||||    
T  12329620 gtcaattttgatccaaaaatcaccatttcgaattgtttttccttttatcctaattgaataagtgatttcacata 12329693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 31202440 - 31202525
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| |||| ||| || ||| ||||||||||| ||||||  || |||||||||||||||||||||    
T  31202440 gggtgatttaaggtcaattttgacccaaaaatcatccatccaaattgtttttctttctattataattgaataagtgatttcacata 31202525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 11161860 - 11161948
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    |||||||| ||||  |||||||||||||| |||| |||||||| | | ||||||||| || ||||||| |||||||||| |||||||||    
T  11161860 agaggggtaatttagggtcaattttgacccaaaaatcaccccttcaagttgtttttctttatatcctaattgaataagtcatttcacat 11161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 31308167 - 31308215
Alignment:
Q  313 ctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  31308167 ctccgagttgtttttccttctatcctaattgaataagtgatttcacata 31308215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 356
Target Start/End: Complemental strand, 30039476 - 30039399
Alignment:
Q  278 gtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttc 356  Q
    ||||||| ||||||||||||||| |||| |||| | |||||||||||||||||||| | ||| ||||||| ||||||||    
T  30039476 gtgatttatggtcaattttgacccaaaa-tcactcatccgaattgtttttccttcttttctaattgaatatgtgatttc 30039399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 13570877 - 13570788
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||   ||||||||||| | |||| |||  | ||| ||||||||||| |||||||||| || ||||||||||||||||||    
T  13570877 agaggggtgatttagagtcaattttgatctaaaaatcattcatcccaattgtttttcattctatcctaattaaataagtgatttcacata 13570788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 3204890 - 3204818
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| |||| | |||| |||||||||||||||| ||||| ||| || ||| ||||||||||||||    
T  3204890 gtcaattttgacccaaaaattaccc-tccgaattgtttttccatctattctaatttaatgagtgatttcacata 3204818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 7281658 - 7281707
Alignment:
Q  307 tcacccctccgaattgtttttccttctatcctagttgaataagtgatttc 356  Q
    |||||| ||||||||||||||| |||| | ||||||||||||||||||||    
T  7281658 tcacccatccgaattgtttttctttcttttctagttgaataagtgatttc 7281707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 7583915 - 7583851
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatc 336  Q
    |||||||||||||  | |||||||||||| |||| |||||| ||||| |||||||||||| ||||    
T  7583915 agaggggtgatttaggatcaattttgacccaaaaatcacccatccgagttgtttttccttttatc 7583851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 24699812 - 24699899
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattg--tttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| |||| |||||| |||||  ||  ||||| ||| ||||||| || ||||||||||||||||||    
T  24699812 gggtgatttagggtcaattttgacccaaaaatcacccatccgagatgttttttttcttatatcctaattaaataagtgatttcacata 24699899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 13576326 - 13576260
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatccta 339  Q
    |||||||||||||  | |||||||||||| |||| ||| |||||||| ||||||||| ||||||||||    
T  13576326 agaggggtgatttaggatcaattttgacctaaaa-tcatccctccgagttgtttttctttctatccta 13576260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 15288919 - 15288863
Alignment:
Q  302 aaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcac 358  Q
    |||| ||| |||| ||||||||||||| |||||||||| || |||| ||||||||||    
T  15288919 aaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcac 15288863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 15469288 - 15469232
Alignment:
Q  302 aaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcac 358  Q
    |||| ||| |||| ||||||||||||| |||||||||| || |||| ||||||||||    
T  15469288 aaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcac 15469232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 31521962 - 31522049
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31521962 aggggtgatttagggtcaattttgacctaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacata 31522049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 43244524 - 43244435
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  43244524 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttccttctatcctaattgaataagtgatttcacata 43244435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 394416 - 394329
Alignment:
Q  273 gaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  394416 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattcaataagtgatttcacat 394329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 7060302 - 7060391
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||| ||||  |||||||||| ||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7060302 agaggggtaatttagggtcaattttaacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacata 7060391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 22757072 - 22757161
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||  |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22757072 agaggggtgatttagggtcaattttgactcaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttcacata 22757161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 51152105 - 51152192
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  ||||||| |||||| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  51152105 aggggtgatttanggtcaatattgacccaaaaatcacccctccgaattgtttttccttctatcctaatttaataagtgatttcacata 51152192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 8712510 - 8712597
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  |||||||||||||| |||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  8712510 aggggtgatttagggtcaattttgacccaaaaatcacccctcataattgtttttccttctatcctagttgagtaagtgatttcacata 8712597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 13965553 - 13965627
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  13965553 ggtcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcctaattgaataagtgatttcacata 13965627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 24825627 - 24825716
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  | |||||||||||| |||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24825627 agaggggtgatttaggatcaattttgacctaaaaatcactcctccgagttgtttttccttctatcctaattgaataagtgatttcacata 24825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 29268920 - 29268831
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  ||||||||||||||  ||| |||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  29268920 agaggggtgatttaaggtcaattttgaccctaaaatcacccctccgagttgtttttccttttatcctaattgaataagtgatttcacata 29268831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 44757185 - 44757096
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||| | ||| |||||||||||||||||||| |||||||||||||||||||||    
T  44757185 agaggggtgatttaaggtcaattttgacccaaaaatcacccattcgagttgtttttccttctatcctaattgaataagtgatttcacata 44757096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 38944275 - 38944201
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||| || |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  38944275 ggtcaattttggcccaaaaatcacccctccaaattgtttttccttctatcgtagttgaataagtgatttcacata 38944201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 478154 - 478066
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| ||||||||||||||| |||| |||||  |||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  478154 agaggggtgatttatggtcaattttgacccaaaaatcacca-tccgaattgtttttccttatatcctaattgaataagtgattttacata 478066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 24568856 - 24568767
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  ||| |||||||||| |||| |||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||    
T  24568856 agaggggtgatttagggtgaattttgacccaaaaatcacccttccgaattatttttccttctatcctaattgaataagtgattttacata 24568767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 6911658 - 6911747
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||| | |||| ||||| |||||| ||||||||||||||| | || |||||||||||||||||||||    
T  6911658 agaggggtgatttagggtcaattttgatccaaaaatcacctctccgatttgtttttccttctaccttaattgaataagtgatttcacata 6911747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 11210456 - 11210367
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  ||||||||||| || |||| ||||||||||||||| |||||||| | ||| || |||||||||||||||||||||    
T  11210456 agaggggtgatttagggtcaattttgccctaaaaatcacccctccgaattatttttcctcccatcataattgaataagtgatttcacata 11210367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 24100117 - 24100206
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  | |||||||||| | |||| | |||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  24100117 agaggggtgatttaggatcaattttgaaccaaaaattacccatccgaattgtttttccttctatcgtaattgaataagtgatttcacata 24100206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 26674354 - 26674439
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  | |||||||||||| |||| |||||||||| ||||| ||||||||||||| || |||||||||||||||||||||    
T  26674354 gggtgatttaggatcaattttgacctaaaaatcacccctccaaattgcttttccttctatcataattgaataagtgatttcacata 26674439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 26742602 - 26742517
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  | |||||||||||| |||| |||||| ||||||||||||||| ||||||| || |||||||||||||||||||||    
T  26742602 gggtgatttaggatcaattttgacccaaaaatcacccatccgaattgtttttctttctatcttaattgaataagtgatttcacata 26742517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 7083944 - 7083870
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||| | |||| ||||||||  |||||||||||||||||||| || |||||||||||||||||||||    
T  7083944 ggtcaattttgatccaaaaatcacccctatgaattgtttttccttctatcataattgaataagtgatttcacata 7083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 24611942 - 24611853
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| |||||||||| |||| |||| |||||||||  | |  |||| |||||||||||| |||||||||||||||||||||    
T  24611942 agaggggtgatttatggtcaatttagacccaaaaatcacccctctaagtcattttcccttctatcctaattgaataagtgatttcacata 24611853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 25658145 - 25658234
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  ||| |||||||||  |||| ||||| |||| |||||||||||||||| ||||| || ||||||||||||||||||    
T  25658145 agaggggtgatttagggttaattttgactcaaaaatcacctctccaaattgtttttccttctttcctaatttaataagtgatttcacata 25658234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 355
Target Start/End: Original strand, 27394810 - 27394891
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgattt 355  Q
    |||||||||||  |||||||||||||| |||| |||||| |||| ||| ||||||||||||||||| |||||||||| ||||    
T  27394810 aggggtgatttagggtcaattttgacccaaaaatcacccttccggattatttttccttctatcctaattgaataagtaattt 27394891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 30202016 - 30202105
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||| | |||| |||||||| | | |||||||||||| |||| || |||||||||||||||||||||    
T  30202016 agaggggtgatttaaggtcaattttgatccaaaaatcaccccttctagttgtttttccttttatcttaattgaataagtgatttcacata 30202105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 43493394 - 43493341
Alignment:
Q  308 cacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  43493394 cacccctccgaattgtttttccttctatcttaattgaataagtgatttcacata 43493341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 7861331 - 7861259
Alignment:
Q  289 tcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||| |||| ||||| ||| ||||| ||||||||||||||||| || ||||||||||||||||||    
T  7861331 tcaattttgacccaaaaatcaccactctgaattatttttccttctatcctaattaaataagtgatttcacata 7861259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 356
Target Start/End: Complemental strand, 22049543 - 22049464
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttc 356  Q
    |||||||||  ||| |||||||||| |||| |||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  22049543 gggtgatttagggttaattttgacccaaaa-tcaccctttcgaattgtttttccttctatcctaattgaataagtgatttc 22049464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 20400031 - 20399961
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttca 357  Q
    |||||||||||||| |||| ||||||  |||||||| |||| ||||||||||| |||||||||||||||||    
T  20400031 ggtcaattttgacccaaaaatcacccacccgaattgctttttcttctatcctaattgaataagtgatttca 20399961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 39837572 - 39837662
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttcc-ttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||   ||||||||||||| |||| |||||||| ||| || ||||||| || ||||||| |||||||||||||||||||||    
T  39837572 agaggggtgatttagcgtcaattttgacccaaaaatcaccccttcgatttttttttcccttttatcctaattgaataagtgatttcacata 39837662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 19745369 - 19745456
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  | |||||||||||| |||| |||  | |||||||||||||| ||| ||||||| |||||||| ||||||||||||    
T  19745369 aggggtgatttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacata 19745456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 19794437 - 19794350
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  | |||||||||||| |||| |||  | |||||||||||||| ||| ||||||| |||||||| ||||||||||||    
T  19794437 aggggtgatttaggatcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacata 19794350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 29922812 - 29922904
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttttt---ccttctatcctagttgaataagtgatttcacata 361  Q
    |||| ||||||||  |||||||||||||| || | |||||||||| | ||||||||   | |||||||||| |||||||||||||||||||||    
T  29922812 agagaggtgatttagggtcaattttgacctaataatcacccctccaagttgttttttttctttctatcctaattgaataagtgatttcacata 29922904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 50801214 - 50801284
Alignment:
Q  291 aattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||| | |||| | || |||||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  50801214 aattttgatctaaaaataactcctccgaattatttttccttttatcctaattgaataagtgatttcacata 50801284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 361
Target Start/End: Original strand, 6881958 - 6882023
Alignment:
Q  296 tgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||| |||| |||||||| ||| || ||||||||||||||||| || ||||||||||||||||||    
T  6881958 tgacccaaaaatcaccccttcgagttatttttccttctatcctaattaaataagtgatttcacata 6882023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 5814330 - 5814414
Alignment:
Q  277 ggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||  |||||||||||| | |||| ||| |||||| | ||||||| ||||||||| || |||||||||| ||||||||||    
T  5814330 ggtgatttagggtcaattttgatccaaaaatcatccctccaagttgttttcccttctatcttaattgaataagttatttcacata 5814414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 45351200 - 45351124
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgt-ttttccttctatcct-agttgaataagtgatttcacata 361  Q
    |||||||||||| | |||| ||||||||||||||||| |||||||| ||| || | |||||||||||||||||||||    
T  45351200 ggtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacata 45351124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 45360679 - 45360603
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgt-ttttccttctatcct-agttgaataagtgatttcacata 361  Q
    |||||||||||| | |||| ||||||||||||||||| |||||||| ||| || | |||||||||||||||||||||    
T  45360679 ggtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacata 45360603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 2447813 - 2447867
Alignment:
Q  307 tcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||| |||||| |||||  |||||||||| |||||||||||||||||||||    
T  2447813 tcaccccttcgaattatttttttttctatcctaattgaataagtgatttcacata 2447867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 39523433 - 39523475
Alignment:
Q  318 aattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    |||||||||||||| ||||||| ||||||||||||||||||||    
T  39523433 aattgtttttccttttatcctaattgaataagtgatttcacat 39523475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 7084184 - 7084273
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  | |||||||||||| |||| | |  | ||||| ||||||||||||||| | || |||||||||||||| ||||||    
T  7084184 agaggggtgatttaggttcaattttgacccaaaaattatgcttccgatttgtttttccttctaccttaattgaataagtgattgcacata 7084273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 20887883 - 20887810
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    |||||||||||||| |||| |||||| |||||||| || ||  ||||||| || || |||||||||||||||||    
T  20887883 ggtcaattttgacccaaaaatcacccatccgaattattattttttctatcttaattcaataagtgatttcacat 20887810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 12717244 - 12717177
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttc 356  Q
    ||||||||||||| |||| ||| || ||||| |||||||| ||||||||||| || |||||||||||||    
T  12717244 gtcaattttgacccaaaa-tcatccgtccgacttgttttttcttctatcctaattaaataagtgatttc 12717177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 358
Target Start/End: Original strand, 42197533 - 42197616
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcac 358  Q
    |||||||||||  ||| ||||||||| ||||| ||||   |||||||| ||||||||||||||||| || ||||||||| |||||    
T  42197533 aggggtgatttagggttaattttgacaaaaaaatcactt-tccgaattatttttccttctatcctaatttaataagtgacttcac 42197616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 28837072 - 28837120
Alignment:
Q  289 tcaattttgaccaaaaactcacccctccgaattgtttttccttctatccta 339  Q
    ||||||||||||||||| |||||| ||||  ||||||||||||||||||||    
T  28837072 tcaattttgaccaaaaaatcacccatccg--ttgtttttccttctatccta 28837120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 354
Target Start/End: Complemental strand, 626690 - 626609
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatt 354  Q
    |||||||||||||  ||  |||||||||| |||| |||||| || ||||| ||||| |||||||| || ||||||||||||||    
T  626690 agaggggtgatttagggctaattttgacccaaaaatcacccatctgaattattttt-cttctatcataattgaataagtgatt 626609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 361
Target Start/End: Complemental strand, 36124479 - 36124401
Alignment:
Q  283 ttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||| |||||||| | |||| |||| | ||| ||||||||||||| ||||| || |||||| | ||||||||||||    
T  36124479 ttttggttaattttgatccaaaaatcactcatcccaattgtttttcctcctatcttaattgaatgattgatttcacata 36124401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 17473863 - 17473777
Alignment:
Q  275 ggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  17473863 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 17473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 361
Target Start/End: Original strand, 17579351 - 17579437
Alignment:
Q  275 ggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  17579351 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 17579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 21603441 - 21603529
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  21603441 agaggggtgatttagggtcaattttgaccaaaaag-cacccctctgaattgtttttccttctatcctaattgaataagtgatttcacata 21603529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 36579455 - 36579366
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| ||||||  ||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36579455 agagggatgatttagggtcaattttgacccgaaaatcacccctccgaattgtttttccttctatcctagttgaataagtgattccacata 36579366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 9785297 - 9785384
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  |||||||||||||| |||| |||||||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  9785297 aggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcttaattgaataagtgatttcacata 9785384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 11832996 - 11833086
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccc-tccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| |||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  11832996 agagggatgatttatggtcaattttgacccaaaaatcaccccctccgaattgtttttccttctttcctaattgaataagtgatttcacata 11833086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 28665051 - 28664966
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  ||||||||||||||  ||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  28665051 gggtgatttagggtcaattttgaccctaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 28664966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 42603912 - 42603823
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||| |||||||| ||||||||||||||  |||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  42603912 agagcggtgatttatggtcaattttgactcaaaaatcacccctccgaattgtttttcattctatcataattgaataagtgatttcacata 42603823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 45457699 - 45457610
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||  |||| |||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  45457699 agaggggtgatttagggtcaattttgacgcaaaaatcactcctccgaattgtttttccttctatcttaattgaataagtgatttcacata 45457610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 5684345 - 5684432
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  |||||||||||||  |||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  5684345 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattgtttttcattctatcctaattgaataagtgatttcacata 5684432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 5709395 - 5709482
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  |||||||||||||  |||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  5709395 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattgtttttcattctatcctaattgaataagtgatttcacata 5709482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 21990639 - 21990729
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattg-tttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||  |||| |||||||||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  21990639 agaggggtgatttagggtcaattttgactgaaaaatcacccctccgaattgttttttcctgctatcctaattgaataagtgatttcacata 21990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 17509346 - 17509258
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| ||||||  ||||||||||||||||||| |||||| |||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  17509346 agagggatgatttagggtcaattttgaccaaaaaatcaccc-tccgaattatttttccttttatcctaattgaataagtgatttcacata 17509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 17543868 - 17543956
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| ||||||  ||||||||||||||||||| |||||| |||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  17543868 agagggatgatttagggtcaattttgaccaaaaaatcaccc-tccgaattatttttccttttatcctaattgaataagtgatttcacata 17543956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 46026172 - 46026083
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||| | |||||||||||||||||||||||||| |||||||||| |||| |||||    
T  46026172 agaggggtgatttagggtcaattttgacccaaaaatcacacatccgaattgtttttccttctatcctaattgaataagttatttaacata 46026083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 357
Target Start/End: Complemental strand, 48304538 - 48304453
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttca 357  Q
    |||||||||||||  |||||||||||||| |||| |||||| ||||||||| ||||||| |||||||| |||||||||||||||||    
T  48304538 agaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgcttttcctgctatcctaattgaataagtgatttca 48304453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 288 - 361
Target Start/End: Original strand, 32740746 - 32740820
Alignment:
Q  288 gtcaattttgaccaaaaac-tcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||||||  |||||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  32740746 gtcaattttgaccaaaaaaatcaccccctcgaattgtttttccttctatcctaattgaataagtgatttcacata 32740820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 1281276 - 1281191
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||| |||||||||||||| |||||| ||||||||||||||| || ||| ||| |||||||||||||||||||||    
T  1281276 gggtgatttagggtccattttgaccaaaaaatcacccatccgaattgtttttcattatattctaattgaataagtgatttcacata 1281191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 27535434 - 27535523
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||| | | |||| |||||| |||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  27535434 agaggggtgatttagggtcaatttttatccaaaaatcacccatccgaattgtttttccttctattctaattgtataagtgatttcacata 27535523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 39533114 - 39533029
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| |||| ||| | ||| |||||||||||||||||||| || |||||||||||||||||||||    
T  39533114 gggtgatttagggtcaattttgacccaaaaatcatctctctgaattgtttttccttctatcttaattgaataagtgatttcacata 39533029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 45482042 - 45482131
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||| |||||||  ||||||||||||||  ||| ||||||||||||  ||||||||||||||||||| || ||||||||||||||||||    
T  45482042 agaggagtgatttagggtcaattttgaccccaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacata 45482131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 22747648 - 22747562
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  |||||||||||||| |||| |||||||||| | ||||||| |||||||||||| ||||||||||||||| |||||    
T  22747648 aggggtgatttagggtcaattttgacccaaaaatcacccctccaagttgtttt-ccttctatcctaattgaataagtgatttgacata 22747562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 6667373 - 6667463
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcct-agttgaataagtgatttcacata 361  Q
    ||||| |||||||  |||||||||||||| |||| ||||||| ||||||||||||| ||||||| || | |||||||||||||||||||||    
T  6667373 agaggagtgatttagggtcaattttgacccaaaaatcaccccaccgaattgttttttcttctattctaatttgaataagtgatttcacata 6667463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 10574363 - 10574448
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||  |||| ||||||||||||||||||||||||| ||||||| ||||||||  ||||| |||||    
T  10574363 gggtgatttagggtcaattttgactcaaaaatcacccctccgaattgtttttccttttatcctaattgaataaacgattttacata 10574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 42644654 - 42644743
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  | |||||||||||  |||| |||| | |  ||||||||||||||||||||||| |||||||||||||||||||||    
T  42644654 agaggggtgatttaggatcaattttgactcaaaaatcactcatttgaattgtttttccttctatcctaattgaataagtgatttcacata 42644743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 43847083 - 43847137
Alignment:
Q  307 tcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  43847083 tcacccctccgaattgtttttcctcttatcctaattgaataagtgatttcacata 43847137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 2622586 - 2622655
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttca 357  Q
    ||||||||||||| |||| |||| | ||||||||||||||||||||||| || |||||||||| ||||||    
T  2622586 gtcaattttgacccaaaaatcacgcatccgaattgtttttccttctatcttaattgaataagtaatttca 2622655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 3266360 - 3266455
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttttt------ccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| ||||||||||||| | || | ||| |||||||| ||||||||      |||||||||||| |||||||||||||||||||||    
T  3266360 agaggggtgatttatggtcaattttgatccaataatcatccctccgagttgttttttttcttccttctatcctaattgaataagtgatttcacata 3266455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 10094461 - 10094508
Alignment:
Q  314 tccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10094461 tccgaattgtttttccttttatcctaattgaataagtgatttcacata 10094508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 15674712 - 15674666
Alignment:
Q  315 ccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||    
T  15674712 ccgaattgtttttcctcctatcctaattgaataagtgatttcacata 15674666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 41287935 - 41288025
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttt-tccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| || | |||||| ||||| |  |||| ||||||||||||| ||||||| |||||||||||||    
T  41287935 agaggggtgatttagggtcaattttgacccaataatcacccatccgagtgattttttccttctatcctaattgaataggtgatttcacata 41288025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 331
Target Start/End: Original strand, 40761567 - 40761626
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttcctt 331  Q
    |||||| ||||||  |||||||||||||| |||| ||||||||||||| |||||||||||    
T  40761567 agagggatgatttagggtcaattttgacccaaaaatcacccctccgaactgtttttcctt 40761626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 24320351 - 24320277
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||| |||| | | ||| ||||||||||||||||| || || ||||||||||||||||||    
T  24320351 ggtcaattttgactcaaaaatcactcattcgagttgtttttccttctatcttaatttaataagtgatttcacata 24320277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 36719680 - 36719628
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttc 328  Q
    |||||||||  |||||||||||| | |||| ||||||||||||||||||||||    
T  36719680 gggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttc 36719628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 356
Target Start/End: Original strand, 39707272 - 39707351
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttc 356  Q
    |||||||||  |||||||||||||| |||| ||| | |||||| ||||||||| |||||||||| || ||||||| |||||    
T  39707272 gggtgatttagggtcaattttgacccaaaa-tcatcactccgagttgtttttctttctatcctaattaaataagttatttc 39707351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 17221643 - 17221696
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttt 326  Q
    ||||||||||||| | || ||||||||||||||| ||||||||| ||||||||||    
T  17221643 agaggggtgatttatagtgaattttgaccaaaaa-tcacccctctgaattgtttt 17221696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 4621494 - 4621425
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttca 357  Q
    ||||||||||||| |||| |||| | | ||| ||||||||||||||| | || ||||||||| |||||||    
T  4621494 gtcaattttgacctaaaaatcactctttcgagttgtttttccttctaccataattgaataagcgatttca 4621425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 14657917 - 14657877
Alignment:
Q  321 tgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||||| || |||||||||| ||||||||||    
T  14657917 tgtttttccttctatcttaattgaataagttatttcacata 14657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 6115 - 6204
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  6115 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 6204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 14783314 - 14783225
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| ||||||  |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14783314 agagggctgatttagggtcaattttgacccaaaaatcacgcctccgaattgtttttccttctatcctagttgaataagtgatttcacata 14783225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 21507951 - 21507862
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21507951 agaggggtgatttagggtcaattttgacccaaacatcacccctccaaattgtttttccttctatcctagttgaataagtgatttcacata 21507862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 15590222 - 15590133
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  15590222 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgttttttcttctatcctaattgaataagtgatttcacata 15590133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 6420001 - 6419912
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||| | |||| ||||||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  6420001 agaggggtgatttagggtcaattttgatccaaaaatcacccctctgagttgtttttccttctatcctaattgaataagtgatttcacata 6419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 8693803 - 8693711
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttcta---tcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||| |||||||||||||||||||||   ||||| |||||||||||||||||||||    
T  8693803 agaggggtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctcctaattgaataagtgatttcacata 8693711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 12481513 - 12481424
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  | |||||||||||| |||| |||||||||||| ||||||||||||||| | || |||||||||||||||||||||    
T  12481513 agaggggtgatttaggatcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 12481424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 31937557 - 31937473
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  ||||| |||||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  31937557 gggtgatttagggtcagttttgacccaaaaatcacccctccgaattgttttt-cttctatcctaattgaataagtgatttcacata 31937473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 23654228 - 23654317
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||| ||||||||  |||||||||||||| |||| |||||| ||||| ||||||||||||||| | ||  ||||||||||||||||||||    
T  23654228 agagaggtgatttagggtcaattttgacccaaaaatcacccatccgatttgtttttccttctaccttaactgaataagtgatttcacata 23654317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 347
Target Start/End: Complemental strand, 29927516 - 29927447
Alignment:
Q  278 gtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaata 347  Q
    ||||||| ||||||||||||||| |||| |||| ||||| | |||||||||||||||||||| |||||||    
T  29927516 gtgatttatggtcaattttgacccaaaaatcactcctccaagttgtttttccttctatcctaattgaata 29927447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 4084996 - 4085060
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatc 336  Q
    |||||||||||||  |||||||||||||| |||| ||| || |||||||||||||||||||||||    
T  4084996 agaggggtgatttagggtcaattttgaccgaaaaatcatccttccgaattgtttttccttctatc 4085060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 2304953 - 2304864
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  | || ||||||||| |||| ||| ||||| || ||||||| |||||| || || |||||||||||||||||||||    
T  2304953 agaggggtgatttaggatcgattttgacccaaaaatcaaccctctgagttgttttcccttctgtcataattgaataagtgatttcacata 2304864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 355
Target Start/End: Original strand, 15175797 - 15175873
Alignment:
Q  278 gtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgattt 355  Q
    |||||||| |||||||||||||| |||| ||||||||||||| |||||||| ||||||  || || ||||||||||||    
T  15175797 gtgattttcggtcaattttgacccaaaa-tcacccctccgaaatgtttttctttctattttacttaaataagtgattt 15175873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 15470371 - 15470295
Alignment:
Q  278 gtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgattt 355  Q
    ||||||||||||||||||||||| |||| ||||||||| ||| |||||||| ||||||  || || ||||||||||||    
T  15470371 gtgatttttggtcaattttgacccaaaa-tcacccctctgaaatgtttttctttctattttacttaaataagtgattt 15470295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 19402950 - 19402862
Alignment:
Q  273 gaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||  ||||| |||||| | |||| ||||||||  || |||||||||||| |||| || ||||| |||||||||||||||    
T  19402950 gaggggtgatttcgggtcacttttgatccaaaaatcacccctttgagttgtttttccttgtatcataattgaacaagtgatttcacata 19402862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 35220045 - 35219958
Alignment:
Q  273 gaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||  |||||||||||||  |||| |||||||||| | ||| |||||||||||||| | | ||||||||||| |||||||    
T  35220045 gaggggtgatttagggtcaattttgactcaaaaatcacccctccaagttg-ttttccttctatccgaatcgaataagtgatatcacata 35219958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 4922023 - 4921935
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctcc--gaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  |||||||||||||| |||| | ||||||||  | | | |||||||||||||| || |||||||||||||||||||||    
T  4922023 aggggtgatttagggtcaattttgacccaaaaat-acccctcccagtagtttttttccttctatcttaattgaataagtgatttcacata 4921935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 4393778 - 4393837
Alignment:
Q  302 aaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||| ||||||||| || ||||||| |||||||||||| | ||| |||||||||||||||    
T  4393778 aaaaatcacccctctgagttgttttaccttctatcctaatagaacaagtgatttcacata 4393837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 6296395 - 6296303
Alignment:
Q  272 agaggggtgatttttggtcaattttgacc--aaaaactcacccctccgaattgttttt-ccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||   || ||||||||||  ||||| |||  | |||||||||||||| ||||||| |||| ||||||||||| |||||||||    
T  6296395 agaggggtgatttagagttaattttgacctaaaaaaatcattcttccgaattgttttttccttctaccctaattgaataagtggtttcacata 6296303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 6303205 - 6303113
Alignment:
Q  272 agaggggtgatttttggtcaattttgacc--aaaaactcacccctccgaattgttttt-ccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||   || ||||||||||  ||||| |||  | |||||||||||||| ||||||| |||| ||||||||||| |||||||||    
T  6303205 agaggggtgatttagagttaattttgacctaaaaaaatcattcttccgaattgttttttccttctaccctaattgaataagtggtttcacata 6303113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 31937629 - 31937585
Alignment:
Q  317 gaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||| | ||||||||| ||||||||||||||| |||||    
T  31937629 gaattgttttttcatctatcctaattgaataagtgatttaacata 31937585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 5754266 - 5754355
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5754266 agaggggtgatttagggtcaattttgacccaaaaatcatccctccgaattgtttttccttctatcctagttgaataaatgatttcacata 5754355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 359
Target Start/End: Complemental strand, 43474271 - 43474184
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcaca 359  Q
    |||||||||||||  |||||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  43474271 agaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcaca 43474184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 11938002 - 11937912
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttcc-ttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  11938002 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcctttctatcctaattgaataagtgatttcacata 11937912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 12704665 - 12704754
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||||||    
T  12704665 agaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgatttcacata 12704754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 17268267 - 17268178
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| ||||||||||||||| |||| ||| |||| ||| |||||||||||||||||||| |||||||||||||||||||||    
T  17268267 agaggggtgatttatggtcaattttgacccaaaaatcatcccttcgagttgtttttccttctatcctaattgaataagtgatttcacata 17268178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 27095687 - 27095772
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  27095687 gggtgatttagggtcaattttgacctaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 27095772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 44942267 - 44942352
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||| ||||||||||||||| |||| |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  44942267 gggtgatttatggtcaattttgacccaaaaatcacccctccgagttgttttttcttctatcctaattgaataagtgatttcacata 44942352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 34416889 - 34416815
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  34416889 ggtcaattttgaccaaaaaatcatccctccgaattgtttttccttatatcctaattgaataagtgatttcacata 34416815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 9690116 - 9690027
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||| ||||||| |||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  9690116 agaggggtgatttaaggtcaaatttgacccaaaaatcacccctccgaactgtttttccttctatcctaattgaataagtgatctcacata 9690027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 15919852 - 15919941
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||   ||||||||||||| |||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  15919852 agaggggtgatttagagtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataaatgatttcacata 15919941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 20561275 - 20561186
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||| | | ||||||||| |||||||||    
T  20561275 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccaaatcgaataagtggtttcacata 20561186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 22597113 - 22597202
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  22597113 agaggggtgatttaaggtcaattttgacccaaaaatcatccctccgagttgtttttccttctatcctaattaaataagtgatttcacata 22597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 18089535 - 18089446
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||| | |||| |||| |||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  18089535 agaggggtgatttagggtcaattttgatccaaaaatcactcctccgaattgttttttcttatatcctaattgaataagtgatttcacata 18089446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 25067830 - 25067919
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||| ||||||||  |||||||||||||| |||| |||||||||||| ||||||||||||||||  || |||||||||||||||||||||    
T  25067830 agagaggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctattttaattgaataagtgatttcacata 25067919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 33012059 - 33012144
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| |||| |||| | |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  33012059 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctattctaattgaataagtgatttcacata 33012144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 273 - 357
Target Start/End: Complemental strand, 13740801 - 13740718
Alignment:
Q  273 gaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttca 357  Q
    ||||| |||||| |||||| |||||||| |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  13740801 gagggatgatttatggtca-ttttgacccaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttca 13740718  T

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Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 38384585 - 38384497
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    |||||||||||||| |||||||||||||| |||| ||||  |||||| |||||||||||| || |||| ||||||||||||||||||||    
T  38384585 agaggggtgattttgggtcaattttgacccaaaaatcacatctccgatttgtttttccttataccctaattgaataagtgatttcacat 38384497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 9978812 - 9978723
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||| | |||||||||||||| |||| || |||||||| ||||||||||||    
T  9978812 agaggggtgatttaaggtcaattttgacccaaaaatcaccccttcaaattgtttttccttttatcttaattgaataaatgatttcacata 9978723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 31908943 - 31908870
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||| | |||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  31908943 gtcaattttgatccaaaaatcacccttccgaattgttttttcttttatcctagttgaataagtgatttcacata 31908870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 36867986 - 36868075
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||  |||| ||||||||| ||||||||||||||||||| ||| || |||||| |||||||||||    
T  36867986 agaggggtgatttagggtcaattttgactcaaaaatcacccctctgaattgtttttccttctattctaattcaataagcgatttcacata 36868075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 38535448 - 38535359
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| ||||  |||||||  ||||| |||||||||||||| || |||||||||||||||||||||    
T  38535448 agaggggtgatttagggtcaattttgacccaaaaagcacccctttgaattttttttccttctatcataattgaataagtgatttcacata 38535359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 34963208 - 34963121
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    |||||||| ||||| |||||||||||||| |||| |||||| || || ||||||||||||||| |||| ||||||||||||||||||||    
T  34963208 agaggggtaattttgggtcaattttgacctaaaaatcaccc-tctgatttgtttttccttctaccctaattgaataagtgatttcacat 34963121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 361
Target Start/End: Original strand, 35333500 - 35333572
Alignment:
Q  289 tcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||| |||| ||||||||  |||||||||||||| |||||||| |||||||||||||||||||||    
T  35333500 tcaattttgacccaaaaatcacccctaagaattgtttttcctgctatcctaattgaataagtgatttcacata 35333572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 359
Target Start/End: Complemental strand, 7073091 - 7073004
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcaca 359  Q
    |||||||||||||  |||||||||||||| |||| || ||| | ||||||| |||||||||||||||| |||||||||| | ||||||    
T  7073091 agaggggtgatttagggtcaattttgacccaaaaatcgccctttcgaattggttttccttctatcctaattgaataagtaacttcaca 7073004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 28231205 - 28231151
Alignment:
Q  307 tcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  28231205 tcacccatccgaattgtttttccttctatcttggttgaataagtgatttcacata 28231151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 4604446 - 4604361
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| |||| | || | | ||| |||||||||||||||| ||| |||||||||||||||||||||    
T  4604446 gggtgatttaaggtcaattttgacccaaaaattactcattcgagttgtttttccttctattctaattgaataagtgatttcacata 4604361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 32015198 - 32015262
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatc 336  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||| ||||    
T  32015198 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttatatc 32015262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 10287133 - 10287060
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||| ||||||||||||||||  |||| || ||||||| |||||||||||||||||||||    
T  10287133 ggtcaattttgacataaaaatcacccctccgaattgcatttcttt-tatcctaattgaataagtgatttcacata 10287060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 4739310 - 4739396
Alignment:
Q  273 gaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||  ||||||||  ||||  ||| |||||||||||| ||||||||||||| |||||| || ||||||| ||||||||||    
T  4739310 gaggggtgatttagggtcaatt--gaccccaaaatcacccctccgagttgtttttccttccatcctaattaaataagtaatttcacata 4739396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 34470957 - 34471033
Alignment:
Q  287 ggtcaattttgaccaaaaactcac--ccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||| |||| ||||  ||||||||||||||| || ||||||| || |||||| ||||||||||||||    
T  34470957 ggtcaattttgacccaaaaatcacacccctccgaattgtttatctttctatcttaattgaatcagtgatttcacata 34471033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 13879157 - 13879060
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttttt--------ccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| ||||||  |||||||||||||| || | |||||||||||| ||||||||        |||||||||||| |||||||||||||||||||||    
T  13879157 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacata 13879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 14019282 - 14019185
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttttt--------ccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| ||||||  |||||||||||||| || | |||||||||||| ||||||||        |||||||||||| |||||||||||||||||||||    
T  14019282 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgttttttttttcttccttctatcctaattgaataagtgatttcacata 14019185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 28262032 - 28261972
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatc 336  Q
    |||||||||  |||||||||||||| |||| |||| | |||||||||||||||||||||||    
T  28262032 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctatc 28261972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 361
Target Start/End: Complemental strand, 4426759 - 4426712
Alignment:
Q  314 tccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  4426759 tccgatttgtttttccttctatcctaattgaataaatgatttcacata 4426712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 32314462 - 32314509
Alignment:
Q  314 tccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  32314462 tccgaattgttttttcttctatcctaattgaataaatgatttcacata 32314509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 4732102 - 4732138
Alignment:
Q  325 tttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4732102 tttccttctatcctaattgaataagtgatttcacata 4732138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 17767678 - 17767611
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttc 356  Q
    ||||||||||||| | || |||||||| ||| |||||||||||| ||||||| || |||||||||||||    
T  17767678 gtcaattttgacccagaa-tcaccccttcgagttgtttttccttatatcctaattaaataagtgatttc 17767611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 331
Target Start/End: Complemental strand, 17116544 - 17116490
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttcctt 331  Q
    ||||||||| ||||||||||||||| |||| ||| || ||||||||||||||||||    
T  17116544 gggtgatttatggtcaattttgacctaaaa-tcatccgtccgaattgtttttcctt 17116490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 356
Target Start/End: Complemental strand, 11798653 - 11798576
Alignment:
Q  278 gtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttc 356  Q
    ||||||| ||||||||||||||| |||| ||||||||||   ||| |||||||| ||||||| || ||||||| |||||    
T  11798653 gtgatttatggtcaattttgacccaaaa-tcacccctccatgttgcttttccttatatcctaattaaataagtaatttc 11798576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 12891232 - 12891188
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctcc 316  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||    
T  12891232 agaggggtgatttagggtcaattttgacccaaaaatcacccctcc 12891188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 424434 - 424345
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  424434 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacata 424345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 7995703 - 7995614
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7995703 agaggggtgatttagggtcaattttgacccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttcacata 7995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 32784088 - 32784175
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  32784088 aggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccttattgaataagtgatttcacata 32784175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 3232770 - 3232855
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  3232770 gggtgatttagggtcaattttgatcaaaaaatcacccctccgaattgtttttccttctatcctaattgaataaatgatttcacata 3232855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 357
Target Start/End: Complemental strand, 33487173 - 33487088
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttca 357  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  33487173 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaatatgtgatttca 33487088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 12871599 - 12871688
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||| ||||||||| || ||||||| | |||||||||||||||||||    
T  12871599 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttcattatatcctaatcgaataagtgatttcacata 12871688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 14265266 - 14265351
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  ||||||||||||| ||||| ||||||||||||  ||||||||||||||||||| || ||||||||||||||||||    
T  14265266 gggtgatttagggtcaattttgacaaaaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacata 14265351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 28678273 - 28678184
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||| | ||||||||||||||| ||||||| || |||||||||||||||||||||    
T  28678273 agaggggtgatttagggtcaattttgacccaaaaatcactcgtccgaattgtttttcgttctatcataattgaataagtgatttcacata 28678184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 42490871 - 42490960
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||| ||||||||  |||||| ||||||| |||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  42490871 agagaggtgatttagggtcaagtttgacctaaaaatcacccctccgaattgtttttcgttctatcttaattgaataagtgatttcacata 42490960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 20411555 - 20411640
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||| ||||||||||||||| |||| |||||| ||||||||||||||| || ||| | | |||||||||||||||||||||    
T  20411555 gggtgatttatggtcaattttgacccaaaaatcacccatccgaattgtttttctttttattcaaattgaataagtgatttcacata 20411640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 27534677 - 27534766
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| ||||||  |||||||||||||| |||| ||| |||||||| ||||||||||||||| | || |||||||||||||||||||||    
T  27534677 agagggatgatttagggtcaattttgacccaaaaatcatccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 27534766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 29205267 - 29205348
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttca 357  Q
    |||||||||  |||||||||||||| |||| ||||||||  |||||||||||||||||||| || |||||||||||||||||    
T  29205267 gggtgatttagggtcaattttgacccaaaaatcaccccttggaattgtttttccttctatcataattgaataagtgatttca 29205348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 37822471 - 37822399
Alignment:
Q  289 tcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||| |||| | |||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  37822471 tcaattttgacccaaaaattacccttctgaattgtttttccttctatcctaattgaataagtgatttcacata 37822399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 4882486 - 4882413
Alignment:
Q  288 gtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||| |||| |||| |||||||||||| ||||||||| || ||||||| |||||||||||||||||||||    
T  4882486 gtcaatttcgacccaaaaatcacccctccgatttgtttttcattatatcctaattgaataagtgatttcacata 4882413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 44517160 - 44517214
Alignment:
Q  307 tcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  44517160 tcacccttccgaattgtttttccttctatcctaattcaataagtgatttcacata 44517214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 18343592 - 18343681
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  | |||||||||||| |||| |||||||| ||| ||||||||||||||| | || || ||| ||||||||||||||    
T  18343592 agaggggtgatttaggatcaattttgacccaaaaatcaccccttcgatttgtttttccttctaccttaattaaatgagtgatttcacata 18343681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 335
Target Start/End: Complemental strand, 33939145 - 33939082
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctat 335  Q
    |||||||||||||  |||||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  33939145 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttctttctat 33939082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 45193769 - 45193680
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttttt-ccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||| |||||  |||||||||| ||| || | | |||||||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  45193769 agaggggcgatttagggtcaattttaacccaataat-acccctccgagttgttttttccttctatcctaattgaataagtgatttcacata 45193680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 49326010 - 49325940
Alignment:
Q  57 catcgccgcaccacccaatgtttccgctatattattcctaggttagaagtttcttctccaattttttgaaa 127  Q
    |||||| ||||||||||||||  ||||| |||||| ||| |||||| ||||||||||||||||||| ||||    
T  49326010 catcgctgcaccacccaatgtcgccgctgtattatcccttggttaggagtttcttctccaatttttcgaaa 49325940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 4871165 - 4871080
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  | |||||||||||  | || ||||| ||||||||||||||||||| ||| ||| |||||||||| ||||||||||    
T  4871165 gggtgatttaagatcaattttgactcataaatcaccactccgaattgtttttccttttattctaattgaataagttatttcacata 4871080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 13488675 - 13488590
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||| ||||||||| |||| |||||| ||||| ||||||||||||| | | || ||||||||||||||| |||||    
T  13488675 gggtgatttagggtcgattttgacccaaaaatcacccatccgatttgtttttccttccaccttaattgaataagtgattttacata 13488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 17347592 - 17347664
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    ||||||||||||||||||| |||||| ||||| |||||||| |||||||| ||   ||||||||||||||||||    
T  17347592 ggtcaattttgaccaaaaa-tcacccatccgagttgttttttcttctatcataaaggaataagtgatttcacat 17347664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 42276335 - 42276423
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  ||| | |||||||  |||| ||||||||||||||||||||| |||||||| || || ||||| ||||||||||||    
T  42276335 agaggggtgatttagggttatttttgacacaaaa-tcacccctccgaattgttttttcttctatcataattaaataactgatttcacata 42276423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 45750456 - 45750545
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| ||| |  ||||| |  ||||||||| ||||||| |||||||||| ||||||||||    
T  45750456 agaggggtgatttaaggtcaattttgacccaaaaatcatcaatccgattgttttttccttttatcctaattgaataagttatttcacata 45750545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 49324457 - 49324400
Alignment:
Q  134 gttatgaaaataaaacaatgtaacaaatgcaaaatatattaaaatcataagttcaatt 191  Q
    ||||||||||| ||||| ||||||||| ||||||||||| ||||||| ||||||||||    
T  49324457 gttatgaaaatcaaacagtgtaacaaacgcaaaatatatcaaaatcacaagttcaatt 49324400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 9298519 - 9298474
Alignment:
Q  311 ccctccgaattgtttttccttctatcctagttgaataagtgatttc 356  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||    
T  9298519 ccctccgagttgtttttccttctatcctagttaaataattgatttc 9298474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 51418040 - 51418080
Alignment:
Q  320 ttgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  51418040 ttgtttttccttctatcctaattgaa-aagtgatttcacata 51418080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 29726690 - 29726650
Alignment:
Q  321 tgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||| ||||||| | |||||||||||||||||||    
T  29726690 tgtttttccttatatcctaatcgaataagtgatttcacata 29726650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 17699537 - 17699619
Alignment:
Q  278 gtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacat 360  Q
    |||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17699537 gtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacat 17699619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 17331306 - 17331395
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||||||||||||||||||||    
T  17331306 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctatcttaattgaataagtgatttcacata 17331395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 6281022 - 6281111
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||| ||||| ||||||||||||| ||| ||||||||||||||| |||||    
T  6281022 agaggggtgatttatggtcaattttgacccaaaaatcacccctctgaattatttttccttctattctaattgaataagtgattttacata 6281111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 27241046 - 27241131
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||| || |||||||||||| |||| ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  27241046 gggtgatttatgatcaattttgacccaaaaatcacccctctgaattgtttttccttttatcctaattgaataagtgatttcacata 27241131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 28040607 - 28040696
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||||| ||| |||||||||| ||||||| |||||||||||||||||||||    
T  28040607 agaggggtgatttacggtcaattttgacccaaaaatcacccctccaaatcgtttttccttatatcctaattgaataagtgatttcacata 28040696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 33164611 - 33164522
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| ||||||||||||||  |||| |||| ||||||||||||||||||||||| | || |||||||||||||||||||||    
T  33164611 agaggggtgatttatggtcaattttgactcaaaaatcactcctccgaattgtttttccttctaccttaattgaataagtgatttcacata 33164522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 43493850 - 43493939
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||| | |||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  43493850 agaggggtgatttagggtcaattttgatccaaaaatcacctctccgaattgtttttccttctattctaattgaataagtgatttcacata 43493939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 32347858 - 32347768
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttttt-ccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||| ||||||| |||| |||||||||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  32347858 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgacttgttttttccttctatcctaattgaataagtgatttcacata 32347768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 42609127 - 42609211
Alignment:
Q  277 ggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||  |||||||||||||| |||| |||| | |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  42609127 ggtgatttagggtcaattttgacctaaaaatcactcatccgaattgttttttcttctatcctaattgaataagtgatttcacata 42609211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 29097769 - 29097856
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  |||||||||||||| |||  |||||||||||| ||||||||||||||| | || |||||||||||||||||||||    
T  29097769 aggggtgatttagggtcaattttgacccaaagatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacata 29097856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 26295201 - 26295118
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgattt 355  Q
    |||| ||||||||  |||||||||||| | |||| ||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  26295201 agagaggtgatttagggtcaattttgatccaaaaatcacccctccgaagtgtttttccttctatccttattgaataagtgattt 26295118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 357
Target Start/End: Complemental strand, 12439757 - 12439692
Alignment:
Q  291 aattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttca 357  Q
    |||||||||| |||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  12439757 aattttgacctaaaaatcaccc-tccgaattgtttttcattctatcctagttgaataagtgatttca 12439692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 17096385 - 17096293
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgttttt---ccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| || | |||||||||| | ||||||||   |||||||||||| |||||||||||||||||||||    
T  17096385 agaggggtgatttagggtcaattttgacccaataatcacccctcccagttgttttttttccttctatcctaattgaataagtgatttcacata 17096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 7771949 - 7771888
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttct 333  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||||    
T  7771949 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttct 7771888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 178244 - 178160
Alignment:
Q  277 ggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||  |||||||||||||  |||| ||||| |||||| |||| ||||||| ||||||| |||||||||||||||||||||    
T  178244 ggtgatttaaggtcaattttgactcaaaaatcacctctccgagttgtgtttccttatatcctaattgaataagtgatttcacata 178160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 6635227 - 6635317
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcaccc-ctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||| ||||||  || ||||||||||| |||| |||||| ||| || ||||||||||||||||| || |||||||||||||||||||||    
T  6635227 agagggatgatttagggccaattttgacccaaaaatcaccctctctgagttgtttttccttctatcataattgaataagtgatttcacata 6635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 34431053 - 34431127
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||| |||| |||||| | |||||||||||| |||||||  || |||||||||||||||||||||    
T  34431053 ggtcaattttgacccaaaaatcacccattcgaattgttttttcttctattttaattgaataagtgatttcacata 34431127  T

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Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 39179936 - 39179882
Alignment:
Q  307 tcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  39179936 tcacccctccgaattatttttccttctattctaattgaataagtgatttcacata 39179882  T

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Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 39531540 - 39531457
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  |||||||||||||| |||| ||| |||||||| ||||||| ||||||||| || |||||||||||||||||||||    
T  39531540 gggtgatttaaggtcaattttgacccaaaa-tcatccctccgagttgtttt-ccttctatcgtaattgaataagtgatttcacata 39531457  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 981164 - 981079
Alignment:
Q  276 gggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||  | |||||||||||| || | || ||||||||| ||||||||||||||||| || |||||  ||||||||||||||    
T  981164 gggtgatttaggatcaattttgacccaataatcgcccctccgagttgtttttccttctatcataattgaacgagtgatttcacata 981079  T

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Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 3740336 - 3740424
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||| |||||||  ||| |||||||||  |||| ||| || || |||||||||| |||||||||||| |||||||||||||||||||||    
T  3740336 agaggtgtgatttagggttaattttgactcaaaaatcatccatctgaattgtttt-ccttctatcctaattgaataagtgatttcacata 3740424  T

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Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 20483165 - 20483253
Alignment:
Q  273 gaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagtt-gaataagtgatttcacata 361  Q
    ||||||||||||  | |||||||||||| |||| |||||| ||| |||||||||||||| ||| ||| || |||||||||||||||||||    
T  20483165 gaggggtgatttaggatcaattttgacccaaaaatcaccc-tccaaattgtttttccttttattctaatttgaataagtgatttcacata 20483253  T

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Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 361
Target Start/End: Complemental strand, 3079414 - 3079359
Alignment:
Q  306 ctcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||| |||||||||||| |||| || ||||||||||||||| |||||    
T  3079414 ctcacccctccgatttgtttttccttatatcataattgaataagtgatttaacata 3079359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 23882259 - 23882170
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  ||||||||||||   |||| ||| |  ||| ||||||||||| |||||||| | ||||||||||||||| |||||    
T  23882259 agaggggtgatttagggtcaattttgattcaaaaatcatcaatccaaattgtttttctttctatccaaattgaataagtgatttgacata 23882170  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 17687225 - 17687272
Alignment:
Q  314 tccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||| ||||||||||||||||| || |||||||||| ||||||||||    
T  17687225 tccgagttgtttttccttctatcttaattgaataagttatttcacata 17687272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 42396640 - 42396566
Alignment:
Q  287 ggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||| |||| ||| |  | |||||| ||||| |||||||| || ||||||||| |||||||||||    
T  42396640 ggtcaattttgacccaaaaatcatcttttcgaattattttttcttctatcttaattgaataagcgatttcacata 42396566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 361
Target Start/End: Original strand, 12891706 - 12891743
Alignment:
Q  324 ttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  12891706 ttttccttttatcctaattgaataagtgatttcacata 12891743  T

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Target: scaffold1379 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 1229 - 1140
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| |||| |||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  1229 agaggggtgatttaaggtcaattttgacccaaaaatcacccctgcgaattgtttttccttctaccctaattgaataagtgatttcacata 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 1 - 42
Alignment:
Q  320 ttgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  1 ttgtttttccttctatcttaattgaataagtgatttcacata 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 35065 - 35149
Alignment:
Q  277 ggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||||  |||||||||||||| |||| |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  35065 ggtgatttagggtcaattttgacccaaaaatcacccatccgagttgtttttccttctatcctaattgaataagtgatttcacata 35149  T

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Target: scaffold0056 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 361
Target Start/End: Original strand, 74159 - 74231
Alignment:
Q  289 tcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  74159 tcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcacata 74231  T

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Target: scaffold0536 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 2878 - 2969
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttt--tccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||||  |||||||||||||| || | |||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||    
T  2878 agaggggtgatttagggtcaattttgacccaataatcacccctccgagttgtttttttccttctatcctaattgaataagtgatttcacata 2969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 7245 - 7178
Alignment:
Q  294 tttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  7245 tttgacccaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacata 7178  T

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Target: scaffold0001 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 404401 - 404312
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    ||||||| |||||  |||||||||||| | |||| |||||| ||||||| ||||||| | |||||||| |||||||||||||||||||||    
T  404401 agaggggcgatttaaggtcaattttgatccaaaaatcacccatccgaatagtttttcttgctatcctaattgaataagtgatttcacata 404312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 2557 - 2471
Alignment:
Q  274 aggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgatttcacata 361  Q
    |||||||||||  ||||| |||||||| |||| |||||| || || ||||||||||||||||| || | |||||||||||||||||||    
T  2557 aggggtgatttagggtcatttttgacccaaaaatcaccc-tctgagttgtttttccttctatcataatcgaataagtgatttcacata 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 13392 - 13300
Alignment:
Q  272 agaggggtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttct----atcctagttgaataagtgatttcacat 360  Q
    |||| ||||||||  |||||||||||| | |||| |||||||||||||||||||||  || |    |||||| ||||||||||||||||||||    
T  13392 agagaggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttttttttttttatcctaattgaataagtgatttcacat 13300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 915 - 840
Alignment:
Q  278 gtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgattt 355  Q
    ||||||||||||||||||||||  |||| ||| ||||||||| |||||||| ||||||  || || ||||||||||||    
T  915 gtgatttttggtcaattttgactcaaaa-tca-ccctccgaaatgtttttctttctattttacttaaataagtgattt 840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 8654 - 8579
Alignment:
Q  278 gtgatttttggtcaattttgaccaaaaactcacccctccgaattgtttttccttctatcctagttgaataagtgattt 355  Q
    ||||||||||||||||||||||  |||| ||| ||||||||| |||||||| ||||||  || || ||||||||||||    
T  8654 gtgatttttggtcaattttgactcaaaa-tca-ccctccgaaatgtttttctttctattttacttaaataagtgattt 8579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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