View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1111_low_91 (Length: 363)

Name: NF1111_low_91
Description: NF1111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1111_low_91
NF1111_low_91
[»] chr6 (83 HSPs)
chr6 (21-356)||(13740527-13740862)
chr6 (21-356)||(13746027-13746362)
chr6 (169-356)||(13353195-13353382)
chr6 (169-356)||(33796320-33796507)
chr6 (169-355)||(12330083-12330269)
chr6 (168-356)||(6542846-6543034)
chr6 (169-356)||(4868715-4868903)
chr6 (165-356)||(3680002-3680193)
chr6 (183-356)||(33494547-33494720)
chr6 (174-356)||(9705019-9705200)
chr6 (174-341)||(33631723-33631889)
chr6 (176-318)||(11085582-11085724)
chr6 (221-341)||(32290774-32290894)
chr6 (169-343)||(30256572-30256745)
chr6 (174-319)||(8026388-8026533)
chr6 (169-356)||(6400758-6400936)
chr6 (174-324)||(21690721-21690871)
chr6 (176-335)||(15082066-15082226)
chr6 (166-258)||(8566960-8567051)
chr6 (169-316)||(6054163-6054310)
chr6 (169-258)||(4868578-4868667)
chr6 (172-317)||(7638790-7638935)
chr6 (168-349)||(24554110-24554290)
chr6 (170-258)||(11721900-11721988)
chr6 (268-356)||(17147798-17147886)
chr6 (174-306)||(27653216-27653348)
chr6 (175-326)||(5572549-5572699)
chr6 (174-265)||(30256812-30256902)
chr6 (174-342)||(2736318-2736487)
chr6 (169-250)||(6400629-6400710)
chr6 (174-258)||(13740915-13740999)
chr6 (174-258)||(13746415-13746499)
chr6 (174-317)||(3713341-3713484)
chr6 (229-348)||(6237618-6237737)
chr6 (183-312)||(8001496-8001626)
chr6 (169-260)||(12330290-12330380)
chr6 (174-265)||(27772713-27772804)
chr6 (183-326)||(19712722-19712867)
chr6 (220-341)||(3921603-3921723)
chr6 (177-258)||(9705256-9705337)
chr6 (169-258)||(25065095-25065184)
chr6 (166-249)||(6065968-6066049)
chr6 (174-258)||(16570158-16570242)
chr6 (268-356)||(31961036-31961124)
chr6 (174-257)||(5572386-5572469)
chr6 (174-260)||(27656457-27656543)
chr6 (167-248)||(2753250-2753331)
chr6 (199-260)||(8026628-8026689)
chr6 (169-258)||(19639114-19639203)
chr6 (199-258)||(6623411-6623470)
chr6 (268-327)||(30505595-30505654)
chr6 (174-258)||(2736168-2736252)
chr6 (174-258)||(17147661-17147745)
chr6 (174-258)||(19712951-19713035)
chr6 (177-260)||(12329943-12330026)
chr6 (220-258)||(4161847-4161885)
chr6 (220-258)||(4223467-4223505)
chr6 (168-258)||(6054396-6054486)
chr6 (168-258)||(6542710-6542799)
chr6 (169-258)||(12199805-12199895)
chr6 (180-340)||(27993560-27993722)
chr6 (174-258)||(10145751-10145835)
chr6 (168-260)||(15081907-15081999)
chr6 (221-265)||(20373616-20373660)
chr6 (166-242)||(21214976-21215052)
chr6 (173-256)||(32290961-32291043)
chr6 (170-236)||(15600931-15600997)
chr6 (174-260)||(27772945-27773031)
chr6 (174-244)||(28867972-28868042)
chr6 (221-262)||(12885103-12885144)
chr6 (166-255)||(16722811-16722900)
chr6 (293-342)||(28648865-28648914)
chr6 (220-255)||(10659515-10659550)
chr6 (297-335)||(5648825-5648863)
chr6 (174-258)||(7915849-7915932)
chr6 (222-312)||(20660920-20661010)
chr6 (231-349)||(30656542-30656660)
chr6 (174-251)||(2737178-2737255)
chr6 (166-227)||(3680237-3680298)
chr6 (279-356)||(20830617-20830694)
chr6 (218-343)||(30849318-30849443)
chr6 (178-258)||(5648673-5648753)
chr6 (276-320)||(20864050-20864094)
[»] chr7 (98 HSPs)
chr7 (169-356)||(29469599-29469786)
chr7 (174-356)||(25620135-25620317)
chr7 (169-349)||(21861288-21861468)
chr7 (169-356)||(36277129-36277316)
chr7 (169-356)||(1596588-1596774)
chr7 (194-356)||(33834209-33834372)
chr7 (179-356)||(33996217-33996391)
chr7 (165-343)||(31485575-31485753)
chr7 (174-326)||(34027392-34027544)
chr7 (169-356)||(4886323-4886510)
chr7 (174-356)||(48661458-48661640)
chr7 (169-317)||(26239857-26240006)
chr7 (175-362)||(31892151-31892339)
chr7 (166-356)||(3519942-3520133)
chr7 (170-326)||(31257200-31257356)
chr7 (174-326)||(40746264-40746416)
chr7 (166-356)||(2315164-2315363)
chr7 (174-349)||(2404318-2404493)
chr7 (175-324)||(10903085-10903234)
chr7 (174-326)||(28080664-28080815)
chr7 (169-261)||(29469834-29469926)
chr7 (174-265)||(2544441-2544532)
chr7 (167-254)||(48243066-48243153)
chr7 (199-317)||(4506956-4507074)
chr7 (235-356)||(22574661-22574782)
chr7 (181-348)||(44874489-44874657)
chr7 (220-339)||(48417435-48417554)
chr7 (229-356)||(9689008-9689130)
chr7 (221-323)||(21821852-21821954)
chr7 (243-349)||(20305358-20305468)
chr7 (169-258)||(21861523-21861612)
chr7 (174-327)||(26562005-26562158)
chr7 (166-255)||(32278889-32278978)
chr7 (172-288)||(3038055-3038171)
chr7 (223-319)||(10882179-10882275)
chr7 (166-258)||(21054954-21055046)
chr7 (174-258)||(34027626-34027710)
chr7 (221-356)||(36993211-36993346)
chr7 (166-265)||(48243431-48243530)
chr7 (166-335)||(32278995-32279159)
chr7 (166-258)||(47710434-47710526)
chr7 (166-258)||(47722090-47722182)
chr7 (166-257)||(3392973-3393064)
chr7 (194-265)||(6782880-6782951)
chr7 (174-265)||(17202178-17202269)
chr7 (175-258)||(31892387-31892470)
chr7 (194-265)||(40121918-40121989)
chr7 (170-260)||(2544214-2544304)
chr7 (221-355)||(18826392-18826526)
chr7 (296-356)||(3519863-3519923)
chr7 (174-258)||(6634854-6634938)
chr7 (166-258)||(42985124-42985216)
chr7 (171-254)||(2401356-2401439)
chr7 (175-258)||(43085538-43085621)
chr7 (175-261)||(10882004-10882089)
chr7 (172-258)||(36276992-36277078)
chr7 (169-258)||(36993075-36993164)
chr7 (177-258)||(1596830-1596911)
chr7 (169-258)||(43688161-43688249)
chr7 (186-258)||(1000560-1000632)
chr7 (168-302)||(11211634-11211769)
chr7 (242-349)||(6001580-6001687)
chr7 (171-258)||(6991751-6991838)
chr7 (199-341)||(30727272-30727415)
chr7 (168-258)||(32879615-32879706)
chr7 (177-260)||(36206062-36206145)
chr7 (175-258)||(43075311-43075394)
chr7 (168-258)||(2404175-2404265)
chr7 (166-256)||(3519733-3519818)
chr7 (186-248)||(14540963-14541025)
chr7 (170-260)||(31257030-31257120)
chr7 (168-265)||(23796178-23796275)
chr7 (275-356)||(32292619-32292700)
chr7 (166-254)||(31485430-31485517)
chr7 (219-258)||(7786255-7786294)
chr7 (174-257)||(44874348-44874431)
chr7 (168-265)||(1793741-1793836)
chr7 (176-258)||(1793921-1794003)
chr7 (174-260)||(40746497-40746583)
chr7 (174-258)||(4268053-4268138)
chr7 (221-262)||(20305660-20305701)
chr7 (168-257)||(23839079-23839168)
chr7 (287-356)||(40746170-40746239)
chr7 (169-348)||(5871866-5872044)
chr7 (218-258)||(48420743-48420783)
chr7 (214-265)||(2376441-2376492)
chr7 (179-254)||(8075863-8075938)
chr7 (199-254)||(14742830-14742885)
chr7 (229-318)||(22339543-22339633)
chr7 (199-258)||(32474524-32474583)
chr7 (220-258)||(5871813-5871851)
chr7 (175-237)||(43089230-43089292)
chr7 (168-265)||(23796017-23796113)
chr7 (305-342)||(47849686-47849723)
chr7 (287-335)||(1793860-1793908)
chr7 (168-208)||(4454769-4454809)
chr7 (222-258)||(22574882-22574918)
chr7 (288-324)||(39164556-39164592)
[»] scaffold0519 (2 HSPs)
scaffold0519 (169-356)||(1910-2097)
scaffold0519 (169-258)||(2145-2234)
[»] chr8 (113 HSPs)
chr8 (169-356)||(11232332-11232519)
chr8 (166-356)||(39052832-39053022)
chr8 (174-354)||(41790658-41790837)
chr8 (175-356)||(20301261-20301442)
chr8 (175-356)||(21087893-21088074)
chr8 (168-329)||(24532351-24532512)
chr8 (166-349)||(31197606-31197788)
chr8 (172-356)||(8084124-8084308)
chr8 (168-356)||(20094698-20094885)
chr8 (169-335)||(5932108-5932274)
chr8 (174-327)||(34842677-34842830)
chr8 (175-323)||(4828068-4828216)
chr8 (174-326)||(19256753-19256905)
chr8 (169-291)||(11232162-11232284)
chr8 (167-356)||(37868486-37868675)
chr8 (168-343)||(8716107-8716283)
chr8 (176-349)||(15042794-15042969)
chr8 (166-356)||(3157462-3157653)
chr8 (169-327)||(12317040-12317198)
chr8 (173-362)||(12688070-12688259)
chr8 (168-327)||(37001219-37001381)
chr8 (221-356)||(10615440-10615575)
chr8 (169-343)||(36917355-36917529)
chr8 (174-326)||(16050028-16050180)
chr8 (182-362)||(8466620-8466801)
chr8 (268-349)||(18004239-18004320)
chr8 (256-349)||(35682926-35683019)
chr8 (169-356)||(422356-422543)
chr8 (168-291)||(5590336-5590459)
chr8 (169-258)||(37001458-37001547)
chr8 (174-265)||(17469817-17469908)
chr8 (174-260)||(19256585-19256671)
chr8 (183-356)||(26208151-26208325)
chr8 (168-309)||(28213053-28213194)
chr8 (169-258)||(35682782-35682871)
chr8 (174-261)||(24075304-24075391)
chr8 (168-258)||(422218-422308)
chr8 (168-258)||(8929010-8929100)
chr8 (174-260)||(17477064-17477150)
chr8 (274-356)||(39052675-39052757)
chr8 (169-258)||(18004097-18004186)
chr8 (180-356)||(42049589-42049766)
chr8 (174-258)||(42846606-42846691)
chr8 (186-258)||(27204975-27205047)
chr8 (186-258)||(27205073-27205145)
chr8 (186-258)||(27205171-27205243)
chr8 (218-342)||(38476081-38476210)
chr8 (175-257)||(4828293-4828375)
chr8 (169-254)||(5931954-5932039)
chr8 (168-349)||(7669412-7669593)
chr8 (169-258)||(10449994-10450083)
chr8 (180-356)||(10614842-10615018)
chr8 (174-265)||(10884063-10884154)
chr8 (168-244)||(38447442-38447518)
chr8 (174-258)||(39743528-39743612)
chr8 (293-356)||(3157147-3157210)
chr8 (174-289)||(29005863-29005978)
chr8 (173-260)||(34653149-34653235)
chr8 (199-258)||(39960216-39960275)
chr8 (218-272)||(26800499-26800553)
chr8 (166-243)||(31197838-31197915)
chr8 (235-359)||(5675956-5676080)
chr8 (170-258)||(12547094-12547181)
chr8 (293-356)||(5675872-5675935)
chr8 (200-318)||(10615655-10615774)
chr8 (182-265)||(38475754-38475837)
chr8 (293-356)||(39960075-39960138)
chr8 (218-260)||(4963397-4963439)
chr8 (175-261)||(7267463-7267549)
chr8 (168-258)||(22638180-22638270)
chr8 (168-258)||(36907429-36907519)
chr8 (180-258)||(40014663-40014741)
chr8 (174-258)||(3157328-3157412)
chr8 (169-258)||(15042671-15042760)
chr8 (174-324)||(42584673-42584819)
chr8 (195-248)||(45122365-45122418)
chr8 (198-258)||(10454449-10454509)
chr8 (174-258)||(12688306-12688390)
chr8 (218-258)||(24532287-24532327)
chr8 (232-356)||(31079478-31079602)
chr8 (174-254)||(31827353-31827433)
chr8 (167-258)||(5675735-5675826)
chr8 (163-274)||(5940046-5940157)
chr8 (199-258)||(35385812-35385871)
chr8 (302-356)||(5589878-5589932)
chr8 (212-258)||(26208013-26208059)
chr8 (177-258)||(25325648-25325729)
chr8 (169-229)||(7669635-7669695)
chr8 (170-238)||(39984809-39984877)
chr8 (251-326)||(17476907-17476982)
chr8 (183-258)||(18939298-18939373)
chr8 (287-326)||(19472417-19472456)
chr8 (287-326)||(19543342-19543381)
chr8 (287-326)||(19589315-19589354)
chr8 (170-253)||(34843112-34843195)
chr8 (220-258)||(8084407-8084445)
chr8 (180-258)||(15686041-15686119)
chr8 (174-260)||(16050260-16050345)
chr8 (218-284)||(16962221-16962287)
chr8 (175-258)||(20301501-20301590)
chr8 (168-254)||(20515137-20515223)
chr8 (175-258)||(21088133-21088222)
chr8 (168-294)||(27439512-27439638)
chr8 (252-326)||(39743372-39743446)
chr8 (220-258)||(44694710-44694748)
chr8 (220-289)||(10615126-10615195)
chr8 (287-340)||(29907865-29907918)
chr8 (165-206)||(36917310-36917351)
chr8 (307-356)||(37867971-37868020)
chr8 (168-208)||(29099791-29099831)
chr8 (172-224)||(29907761-29907813)
chr8 (312-356)||(38475871-38475915)
chr8 (199-247)||(45031373-45031421)
[»] chr2 (94 HSPs)
chr2 (174-356)||(2029768-2029950)
chr2 (166-354)||(40379349-40379537)
chr2 (169-356)||(14466313-14466500)
chr2 (169-356)||(5711577-5711765)
chr2 (218-349)||(16419310-16419441)
chr2 (169-356)||(15124686-15124873)
chr2 (166-349)||(17719391-17719574)
chr2 (219-356)||(93257-93394)
chr2 (219-328)||(93558-93667)
chr2 (170-326)||(2324235-2324391)
chr2 (168-342)||(10523012-10523185)
chr2 (231-356)||(40149139-40149264)
chr2 (170-326)||(5509074-5509230)
chr2 (169-362)||(17525231-17525428)
chr2 (177-335)||(36352083-36352241)
chr2 (179-362)||(33606186-33606369)
chr2 (220-356)||(16533357-16533493)
chr2 (180-343)||(13250173-13250336)
chr2 (218-340)||(21383588-21383711)
chr2 (166-349)||(24395855-24396037)
chr2 (169-258)||(16419496-16419585)
chr2 (169-258)||(5711440-5711529)
chr2 (174-258)||(2030003-2030087)
chr2 (199-334)||(13210550-13210686)
chr2 (166-258)||(40379210-40379302)
chr2 (174-261)||(19191608-19191695)
chr2 (269-356)||(37812406-37812493)
chr2 (177-326)||(28407725-28407875)
chr2 (175-348)||(32356386-32356556)
chr2 (175-341)||(38629841-38630008)
chr2 (168-258)||(12343751-12343841)
chr2 (174-272)||(37840336-37840434)
chr2 (174-310)||(14927101-14927238)
chr2 (170-258)||(21591776-21591865)
chr2 (175-292)||(29718328-29718445)
chr2 (268-349)||(34893518-34893599)
chr2 (169-258)||(42639615-42639704)
chr2 (268-356)||(18607147-18607235)
chr2 (174-261)||(17854690-17854777)
chr2 (174-265)||(27897600-27897690)
chr2 (174-260)||(2324473-2324559)
chr2 (168-258)||(5594233-5594323)
chr2 (180-258)||(19570975-19571053)
chr2 (168-258)||(25082538-25082628)
chr2 (174-260)||(36316050-36316136)
chr2 (170-260)||(37769942-37770032)
chr2 (169-254)||(15124553-15124638)
chr2 (193-265)||(10570988-10571060)
chr2 (174-262)||(17854926-17855014)
chr2 (236-291)||(31700940-31700995)
chr2 (274-356)||(44404064-44404147)
chr2 (214-313)||(5594066-5594166)
chr2 (174-252)||(32884106-32884184)
chr2 (166-239)||(16533538-16533611)
chr2 (212-265)||(27036409-27036462)
chr2 (293-362)||(31001880-31001949)
chr2 (181-258)||(40149004-40149081)
chr2 (199-335)||(42895271-42895408)
chr2 (166-258)||(11020549-11020641)
chr2 (218-258)||(17719609-17719649)
chr2 (176-262)||(5509314-5509400)
chr2 (220-317)||(33381132-33381230)
chr2 (174-258)||(5851682-5851767)
chr2 (212-285)||(7208999-7209072)
chr2 (293-342)||(21383442-21383491)
chr2 (174-258)||(17525100-17525184)
chr2 (214-258)||(30701126-30701170)
chr2 (218-258)||(31700746-31700786)
chr2 (255-335)||(36316209-36316289)
chr2 (185-260)||(31222531-31222606)
chr2 (170-260)||(8424883-8424973)
chr2 (168-258)||(9927904-9927994)
chr2 (221-259)||(13486380-13486418)
chr2 (180-258)||(18208993-18209071)
chr2 (261-351)||(30701166-30701256)
chr2 (180-349)||(15460979-15461148)
chr2 (221-258)||(21383285-21383322)
chr2 (221-258)||(36351926-36351963)
chr2 (285-337)||(2375085-2375137)
chr2 (275-323)||(19110343-19110391)
chr2 (275-342)||(11099519-11099586)
chr2 (168-251)||(15464762-15464845)
chr2 (180-258)||(30006580-30006658)
chr2 (180-258)||(30063268-30063346)
chr2 (174-258)||(93123-93208)
chr2 (166-227)||(94052-94113)
chr2 (221-258)||(789393-789430)
chr2 (205-266)||(14127166-14127227)
chr2 (186-258)||(15988423-15988496)
chr2 (169-226)||(37812301-37812358)
chr2 (200-260)||(1926440-1926500)
chr2 (174-258)||(19544372-19544455)
chr2 (218-258)||(31008572-31008612)
chr2 (294-342)||(42895596-42895644)
[»] scaffold0692 (2 HSPs)
scaffold0692 (172-356)||(5657-5841)
scaffold0692 (170-258)||(5545-5633)
[»] chr5 (107 HSPs)
chr5 (169-356)||(41666895-41667083)
chr5 (166-349)||(15480313-15480496)
chr5 (177-349)||(25258211-25258383)
chr5 (177-349)||(25322001-25322173)
chr5 (175-348)||(9368595-9368768)
chr5 (175-349)||(6413567-6413741)
chr5 (169-349)||(24346646-24346827)
chr5 (218-349)||(18333609-18333740)
chr5 (234-356)||(95404-95526)
chr5 (169-310)||(2063683-2063823)
chr5 (174-356)||(24531598-24531780)
chr5 (169-349)||(24270015-24270195)
chr5 (174-326)||(21209854-21210006)
chr5 (169-349)||(24528534-24528714)
chr5 (175-356)||(6919332-6919512)
chr5 (174-326)||(8098317-8098468)
chr5 (213-348)||(32908863-32908998)
chr5 (222-349)||(43117694-43117821)
chr5 (168-356)||(26137247-26137437)
chr5 (226-340)||(17150387-17150501)
chr5 (174-258)||(19705902-19705986)
chr5 (174-341)||(20225040-20225207)
chr5 (169-258)||(41666758-41666847)
chr5 (174-258)||(28510090-28510174)
chr5 (177-363)||(20510773-20510957)
chr5 (185-326)||(29909654-29909795)
chr5 (174-261)||(27132991-27133078)
chr5 (168-258)||(1564568-1564658)
chr5 (269-335)||(13700749-13700815)
chr5 (168-258)||(18333466-18333556)
chr5 (168-317)||(38731780-38731929)
chr5 (174-258)||(95267-95351)
chr5 (268-356)||(8081252-8081340)
chr5 (180-335)||(7133934-7134087)
chr5 (274-349)||(11896301-11896376)
chr5 (225-355)||(11896588-11896716)
chr5 (221-356)||(17352572-17352706)
chr5 (170-265)||(24487639-24487734)
chr5 (166-257)||(24647687-24647778)
chr5 (166-265)||(37656931-37657030)
chr5 (176-258)||(7607595-7607677)
chr5 (169-265)||(8081107-8081204)
chr5 (212-340)||(17423788-17423917)
chr5 (175-258)||(9368830-9368913)
chr5 (199-356)||(16704621-16704777)
chr5 (199-258)||(25258095-25258154)
chr5 (199-258)||(25321885-25321944)
chr5 (166-265)||(37782044-37782143)
chr5 (170-260)||(8287797-8287886)
chr5 (168-258)||(32908719-32908809)
chr5 (172-258)||(38976930-38977016)
chr5 (175-343)||(2985927-2986096)
chr5 (168-258)||(18885454-18885546)
chr5 (169-258)||(21306881-21306970)
chr5 (169-258)||(21314719-21314808)
chr5 (169-258)||(24346502-24346591)
chr5 (170-258)||(13296887-13296975)
chr5 (169-258)||(15480551-15480642)
chr5 (300-356)||(17016013-17016069)
chr5 (166-258)||(20510643-20510735)
chr5 (170-265)||(13296668-13296762)
chr5 (178-265)||(19522090-19522177)
chr5 (297-356)||(33337376-33337435)
chr5 (174-265)||(42295578-42295669)
chr5 (174-244)||(6413441-6413511)
chr5 (168-258)||(12034683-12034773)
chr5 (176-258)||(13701069-13701151)
chr5 (168-258)||(16571461-16571551)
chr5 (180-257)||(22925026-22925103)
chr5 (169-258)||(24269872-24269960)
chr5 (169-254)||(43117876-43117961)
chr5 (174-254)||(15438986-15439066)
chr5 (197-261)||(21209706-21209770)
chr5 (246-326)||(27133160-27133240)
chr5 (222-265)||(1028392-1028435)
chr5 (182-249)||(7369731-7369798)
chr5 (166-228)||(37781718-37781778)
chr5 (180-258)||(60092-60170)
chr5 (286-348)||(15590049-15590111)
chr5 (218-260)||(24487508-24487550)
chr5 (177-258)||(10846840-10846920)
chr5 (199-240)||(17584197-17584238)
chr5 (174-255)||(29909491-29909572)
chr5 (218-263)||(33337451-33337496)
chr5 (180-256)||(6415913-6415988)
chr5 (174-258)||(17352436-17352520)
chr5 (222-258)||(35167396-35167432)
chr5 (180-247)||(170563-170630)
chr5 (180-255)||(16707029-16707104)
chr5 (230-265)||(17016391-17016426)
chr5 (221-260)||(19522366-19522405)
chr5 (183-258)||(26137110-26137185)
chr5 (162-248)||(37405076-37405162)
chr5 (169-254)||(6637596-6637680)
chr5 (221-258)||(9187332-9187369)
chr5 (177-225)||(10416375-10416424)
chr5 (275-356)||(17143228-17143309)
chr5 (209-258)||(30588857-30588906)
chr5 (180-265)||(37076850-37076934)
chr5 (226-254)||(1564456-1564484)
chr5 (199-247)||(7092173-7092221)
chr5 (174-234)||(8098550-8098610)
chr5 (260-296)||(11682377-11682413)
chr5 (168-248)||(15438870-15438950)
chr5 (312-356)||(30770187-30770231)
chr5 (220-248)||(31974261-31974289)
chr5 (218-258)||(34328954-34328994)
[»] scaffold0129 (1 HSPs)
scaffold0129 (166-356)||(14294-14484)
[»] chr4 (117 HSPs)
chr4 (185-356)||(22231211-22231382)
chr4 (169-356)||(35788653-35788841)
chr4 (174-341)||(40717359-40717526)
chr4 (166-356)||(50543468-50543660)
chr4 (238-356)||(28245664-28245782)
chr4 (174-356)||(21646405-21646586)
chr4 (174-356)||(35819031-35819213)
chr4 (194-343)||(4645661-4645810)
chr4 (174-323)||(34357966-34358115)
chr4 (175-356)||(35796880-35797061)
chr4 (177-326)||(9685400-9685549)
chr4 (174-326)||(53814862-53815014)
chr4 (177-356)||(6218206-6218385)
chr4 (180-327)||(7926333-7926480)
chr4 (166-349)||(11036656-11036839)
chr4 (174-356)||(52559566-52559750)
chr4 (173-326)||(14783120-14783273)
chr4 (175-326)||(12869196-12869347)
chr4 (194-326)||(40716553-40716686)
chr4 (174-326)||(53828456-53828608)
chr4 (170-265)||(5846141-5846236)
chr4 (218-340)||(6666554-6666676)
chr4 (166-260)||(28245525-28245619)
chr4 (221-335)||(36686065-36686179)
chr4 (169-328)||(4464286-4464449)
chr4 (199-335)||(4905660-4905796)
chr4 (166-258)||(50543331-50543423)
chr4 (174-265)||(21498353-21498444)
chr4 (174-320)||(1518163-1518309)
chr4 (229-356)||(13555385-13555507)
chr4 (174-260)||(21498794-21498880)
chr4 (168-258)||(22863467-22863557)
chr4 (169-258)||(22231074-22231163)
chr4 (199-348)||(22445476-22445625)
chr4 (169-258)||(22845448-22845537)
chr4 (275-356)||(25324172-25324253)
chr4 (169-258)||(35788888-35788977)
chr4 (229-328)||(30530093-30530192)
chr4 (274-356)||(5398348-5398430)
chr4 (170-260)||(9685627-9685717)
chr4 (168-258)||(22827531-22827621)
chr4 (174-327)||(30565965-30566119)
chr4 (174-260)||(53814673-53814759)
chr4 (214-355)||(25323937-25324078)
chr4 (169-258)||(39902564-39902653)
chr4 (166-294)||(17111555-17111682)
chr4 (174-261)||(20821972-20822059)
chr4 (174-265)||(25052851-25052942)
chr4 (180-318)||(32002327-32002465)
chr4 (167-341)||(33107862-33108037)
chr4 (177-260)||(54054804-54054887)
chr4 (168-258)||(41187933-41188023)
chr4 (174-263)||(36685871-36685960)
chr4 (233-326)||(54054971-54055064)
chr4 (285-349)||(5398620-5398684)
chr4 (175-306)||(13637389-13637521)
chr4 (181-356)||(22822356-22822532)
chr4 (268-356)||(27634219-27634307)
chr4 (218-348)||(35645600-35645727)
chr4 (177-265)||(37836082-37836170)
chr4 (199-258)||(53559291-53559350)
chr4 (168-258)||(400566-400656)
chr4 (180-309)||(8902632-8902762)
chr4 (220-348)||(35645311-35645436)
chr4 (169-250)||(5398221-5398301)
chr4 (177-258)||(5398477-5398557)
chr4 (166-247)||(9279218-9279299)
chr4 (182-258)||(35609491-35609567)
chr4 (174-258)||(53828290-53828374)
chr4 (277-348)||(12005620-12005691)
chr4 (182-265)||(35609705-35609788)
chr4 (166-245)||(35645779-35645858)
chr4 (175-258)||(35796743-35796826)
chr4 (174-260)||(2463805-2463891)
chr4 (214-320)||(9908770-9908876)
chr4 (175-336)||(18528374-18528541)
chr4 (169-258)||(21684992-21685081)
chr4 (180-265)||(26030318-26030402)
chr4 (175-263)||(11036507-11036595)
chr4 (174-258)||(12869030-12869114)
chr4 (178-258)||(18528218-18528298)
chr4 (178-258)||(28073182-28073262)
chr4 (293-340)||(7572626-7572673)
chr4 (222-328)||(24513290-24513397)
chr4 (214-260)||(1333506-1333552)
chr4 (174-260)||(16066064-16066150)
chr4 (200-258)||(40726746-40726804)
chr4 (168-254)||(44118864-44118950)
chr4 (218-263)||(2516242-2516287)
chr4 (177-258)||(6218441-6218522)
chr4 (221-258)||(7926604-7926641)
chr4 (172-249)||(19125716-19125793)
chr4 (180-301)||(21041356-21041477)
chr4 (174-235)||(27464272-27464333)
chr4 (166-243)||(31254423-31254500)
chr4 (169-258)||(35175029-35175117)
chr4 (220-309)||(43743034-43743123)
chr4 (166-258)||(17111759-17111851)
chr4 (218-258)||(45784871-45784911)
chr4 (217-265)||(52827419-52827467)
chr4 (297-348)||(6778589-6778640)
chr4 (287-342)||(26549536-26549591)
chr4 (175-234)||(28246110-28246169)
chr4 (180-291)||(35485232-35485343)
chr4 (175-258)||(52559804-52559887)
chr4 (310-356)||(20726740-20726786)
chr4 (180-254)||(21646270-21646344)
chr4 (217-255)||(43743261-43743299)
chr4 (202-243)||(22867146-22867187)
chr4 (218-306)||(29168959-29169048)
chr4 (221-258)||(50870482-50870519)
chr4 (220-356)||(21750180-21750316)
chr4 (218-258)||(25324312-25324352)
chr4 (214-258)||(31039348-31039391)
chr4 (225-253)||(40716476-40716504)
chr4 (221-265)||(41743129-41743173)
chr4 (213-249)||(47760517-47760553)
[»] chr1 (112 HSPs)
chr1 (169-356)||(26176902-26177089)
chr1 (168-343)||(30369828-30370003)
chr1 (169-349)||(4112916-4113096)
chr1 (166-356)||(2859530-2859720)
chr1 (168-356)||(4098306-4098493)
chr1 (218-356)||(33156776-33156915)
chr1 (218-356)||(35772072-35772210)
chr1 (166-349)||(16162924-16163107)
chr1 (175-356)||(39348255-39348436)
chr1 (182-348)||(51460353-51460519)
chr1 (178-356)||(27413350-27413528)
chr1 (166-356)||(38733143-38733328)
chr1 (168-343)||(26173372-26173547)
chr1 (170-326)||(51588987-51589143)
chr1 (174-343)||(25145636-25145805)
chr1 (175-356)||(38668125-38668306)
chr1 (170-326)||(3169761-3169917)
chr1 (170-326)||(51589801-51589957)
chr1 (177-356)||(7307723-7307902)
chr1 (169-297)||(17452790-17452918)
chr1 (268-356)||(25713251-25713339)
chr1 (173-304)||(8870865-8870996)
chr1 (166-258)||(25145486-25145578)
chr1 (174-258)||(40079151-40079235)
chr1 (226-306)||(51460003-51460083)
chr1 (170-265)||(51589221-51589316)
chr1 (197-335)||(31496295-31496433)
chr1 (168-258)||(35772257-35772347)
chr1 (251-356)||(4112678-4112783)
chr1 (169-258)||(17452680-17452769)
chr1 (202-343)||(35892083-35892224)
chr1 (166-290)||(17402573-17402697)
chr1 (200-356)||(12376576-12376732)
chr1 (169-258)||(20208529-20208616)
chr1 (166-258)||(38733373-38733465)
chr1 (174-258)||(39348120-39348204)
chr1 (180-272)||(40316037-40316129)
chr1 (268-328)||(52961440-52961500)
chr1 (166-245)||(38668351-38668430)
chr1 (174-260)||(25137302-25137388)
chr1 (184-258)||(33157230-33157304)
chr1 (185-258)||(39544406-39544477)
chr1 (214-348)||(5572664-5572800)
chr1 (168-309)||(26346919-26347059)
chr1 (168-257)||(52961575-52961664)
chr1 (166-258)||(2859393-2859485)
chr1 (218-349)||(9146773-9146905)
chr1 (166-258)||(25713384-25713476)
chr1 (174-258)||(26177142-26177226)
chr1 (166-258)||(27413573-27413665)
chr1 (182-296)||(11234223-11234338)
chr1 (278-341)||(17208657-17208720)
chr1 (279-356)||(369735-369813)
chr1 (168-258)||(25255305-25255394)
chr1 (219-265)||(29265997-29266043)
chr1 (168-254)||(38080598-38080683)
chr1 (168-258)||(42586440-42586529)
chr1 (176-258)||(52650772-52650854)
chr1 (166-251)||(39808457-39808541)
chr1 (172-261)||(51590037-51590124)
chr1 (166-254)||(11924912-11925000)
chr1 (174-258)||(15986334-15986418)
chr1 (179-338)||(5109255-5109413)
chr1 (219-337)||(5953658-5953777)
chr1 (170-260)||(28408038-28408131)
chr1 (199-258)||(31432231-31432290)
chr1 (172-258)||(4098164-4098250)
chr1 (170-260)||(12244962-12245051)
chr1 (220-325)||(12325494-12325599)
chr1 (169-258)||(855975-856064)
chr1 (295-356)||(11524882-11524943)
chr1 (295-356)||(11525097-11525158)
chr1 (168-257)||(26603421-26603510)
chr1 (168-265)||(35892284-35892381)
chr1 (169-258)||(41035828-41035917)
chr1 (169-258)||(43409801-43409889)
chr1 (174-258)||(26865359-26865443)
chr1 (170-254)||(32952066-32952150)
chr1 (221-261)||(52127766-52127806)
chr1 (242-317)||(32783223-32783298)
chr1 (171-258)||(34264711-34264798)
chr1 (218-363)||(52676405-52676549)
chr1 (168-258)||(21626340-21626430)
chr1 (180-349)||(26229573-26229740)
chr1 (180-258)||(31181514-31181592)
chr1 (180-258)||(42351861-42351939)
chr1 (168-254)||(42819293-42819379)
chr1 (180-258)||(52907389-52907467)
chr1 (251-356)||(17412408-17412513)
chr1 (217-343)||(39100396-39100514)
chr1 (177-258)||(51459706-51459787)
chr1 (276-324)||(12509647-12509695)
chr1 (226-258)||(20208230-20208262)
chr1 (214-258)||(22377571-22377615)
chr1 (218-258)||(29898955-29898995)
chr1 (297-349)||(34264631-34264683)
chr1 (214-258)||(40188986-40189030)
chr1 (175-258)||(4112541-4112624)
chr1 (287-338)||(9632100-9632151)
chr1 (218-265)||(11525040-11525087)
chr1 (268-343)||(40524791-40524866)
chr1 (221-258)||(2120123-2120160)
chr1 (308-349)||(7374036-7374077)
chr1 (221-258)||(7653522-7653559)
chr1 (168-205)||(7826085-7826122)
chr1 (221-270)||(10295424-10295473)
chr1 (220-265)||(11524827-11524872)
chr1 (221-258)||(11925091-11925128)
chr1 (168-254)||(40524654-40524742)
chr1 (218-258)||(9499288-9499328)
chr1 (196-228)||(38675998-38676030)
chr1 (218-258)||(38739668-38739708)
[»] chr3 (94 HSPs)
chr3 (174-356)||(20327752-20327934)
chr3 (166-356)||(35038332-35038521)
chr3 (182-356)||(4155331-4155505)
chr3 (169-362)||(16239585-16239779)
chr3 (218-356)||(20303288-20303426)
chr3 (169-315)||(54567886-54568032)
chr3 (199-341)||(45828043-45828185)
chr3 (180-356)||(13574823-13575000)
chr3 (174-326)||(1723009-1723161)
chr3 (174-325)||(11589784-11589935)
chr3 (174-325)||(12930061-12930213)
chr3 (169-307)||(16926901-16927039)
chr3 (168-349)||(8142557-8142738)
chr3 (168-296)||(54368509-54368637)
chr3 (168-291)||(22729093-22729216)
chr3 (174-319)||(49629604-49629749)
chr3 (282-354)||(20303204-20303276)
chr3 (166-258)||(35038195-35038287)
chr3 (260-356)||(46139347-46139443)
chr3 (221-356)||(26272227-26272362)
chr3 (174-258)||(4155558-4155642)
chr3 (174-258)||(43781582-43781666)
chr3 (274-356)||(34992705-34992787)
chr3 (169-254)||(20327619-20327704)
chr3 (199-260)||(50052538-50052599)
chr3 (178-348)||(31317232-31317404)
chr3 (231-355)||(50052677-50052800)
chr3 (218-325)||(28087149-28087256)
chr3 (204-326)||(26753454-26753576)
chr3 (170-259)||(9273190-9273279)
chr3 (229-349)||(15019425-15019546)
chr3 (172-265)||(17001415-17001508)
chr3 (174-255)||(18757841-18757922)
chr3 (168-249)||(38791460-38791541)
chr3 (174-258)||(39683268-39683353)
chr3 (168-265)||(45138965-45139062)
chr3 (175-255)||(472064-472144)
chr3 (268-356)||(19954355-19954443)
chr3 (194-258)||(24866216-24866280)
chr3 (174-326)||(27670326-27670477)
chr3 (169-265)||(39269325-39269421)
chr3 (168-256)||(45138805-45138893)
chr3 (174-261)||(6487331-6487418)
chr3 (174-265)||(9272960-9273051)
chr3 (174-265)||(17638234-17638324)
chr3 (175-258)||(31317466-31317549)
chr3 (278-340)||(21809059-21809121)
chr3 (278-340)||(22775553-22775615)
chr3 (166-267)||(27086578-27086682)
chr3 (165-258)||(50083081-50083175)
chr3 (174-258)||(34610559-34610644)
chr3 (174-258)||(8018967-8019051)
chr3 (194-254)||(32215520-32215580)
chr3 (174-258)||(39620325-39620409)
chr3 (194-258)||(47702410-47702474)
chr3 (268-340)||(52724140-52724212)
chr3 (230-340)||(11659600-11659711)
chr3 (218-257)||(13574686-13574725)
chr3 (168-254)||(13741106-13741193)
chr3 (295-341)||(21888525-21888571)
chr3 (274-348)||(39269173-39269247)
chr3 (169-258)||(16239821-16239910)
chr3 (169-254)||(20303069-20303154)
chr3 (268-349)||(24866136-24866216)
chr3 (235-316)||(35018535-35018616)
chr3 (218-258)||(1353491-1353531)
chr3 (175-258)||(8142409-8142491)
chr3 (167-258)||(14839738-14839829)
chr3 (226-265)||(21833399-21833438)
chr3 (174-265)||(30179702-30179793)
chr3 (218-340)||(33640088-33640211)
chr3 (301-356)||(39683406-39683461)
chr3 (219-258)||(45828290-45828329)
chr3 (217-294)||(1800067-1800145)
chr3 (302-356)||(22729620-22729674)
chr3 (199-257)||(33205489-33205547)
chr3 (168-249)||(1800208-1800289)
chr3 (185-323)||(30326916-30327055)
chr3 (202-334)||(39620119-39620252)
chr3 (214-258)||(21717350-21717394)
chr3 (168-316)||(29215758-29215905)
chr3 (219-258)||(7697399-7697438)
chr3 (227-258)||(27086693-27086724)
chr3 (275-337)||(31150944-31151006)
chr3 (234-340)||(34659156-34659261)
chr3 (168-258)||(46794047-46794136)
chr3 (168-240)||(2805355-2805428)
chr3 (193-258)||(15508865-15508930)
chr3 (169-258)||(17001243-17001332)
chr3 (277-362)||(25417150-25417235)
chr3 (182-227)||(31556307-31556352)
chr3 (174-258)||(3975359-3975443)
chr3 (166-254)||(4008676-4008764)
chr3 (218-258)||(44576256-44576296)
[»] scaffold0048 (2 HSPs)
scaffold0048 (169-356)||(81836-82022)
scaffold0048 (169-258)||(82070-82159)
[»] scaffold0400 (1 HSPs)
scaffold0400 (167-327)||(3836-3997)
[»] scaffold0365 (1 HSPs)
scaffold0365 (167-327)||(4480-4641)
[»] scaffold0092 (2 HSPs)
scaffold0092 (175-318)||(5655-5798)
scaffold0092 (175-258)||(5890-5973)
[»] scaffold0005 (2 HSPs)
scaffold0005 (173-326)||(56457-56610)
scaffold0005 (168-258)||(288658-288748)
[»] scaffold0047 (1 HSPs)
scaffold0047 (166-349)||(12638-12821)
[»] scaffold0045 (1 HSPs)
scaffold0045 (221-335)||(41130-41244)
[»] scaffold0481 (1 HSPs)
scaffold0481 (175-327)||(3403-3555)
[»] scaffold0766 (2 HSPs)
scaffold0766 (172-256)||(6271-6355)
scaffold0766 (229-258)||(6393-6422)
[»] scaffold0181 (1 HSPs)
scaffold0181 (168-258)||(20932-21022)
[»] scaffold0334 (1 HSPs)
scaffold0334 (174-262)||(4426-4514)
[»] scaffold0083 (2 HSPs)
scaffold0083 (175-291)||(51236-51352)
scaffold0083 (268-356)||(51366-51454)
[»] scaffold0366 (2 HSPs)
scaffold0366 (274-356)||(14503-14586)
scaffold0366 (274-356)||(10837-10920)
[»] scaffold0003 (3 HSPs)
scaffold0003 (285-341)||(87727-87783)
scaffold0003 (293-341)||(102295-102343)
scaffold0003 (218-258)||(347572-347612)
[»] scaffold0459 (1 HSPs)
scaffold0459 (274-356)||(13196-13279)
[»] scaffold0024 (1 HSPs)
scaffold0024 (173-254)||(89558-89639)
[»] scaffold0542 (1 HSPs)
scaffold0542 (278-348)||(5732-5802)
[»] scaffold0729 (1 HSPs)
scaffold0729 (297-348)||(2616-2667)
[»] scaffold0027 (1 HSPs)
scaffold0027 (175-254)||(121553-121633)


Alignment Details
Target: chr6 (Bit Score: 240; Significance: 1e-133; HSPs: 83)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 21 - 356
Target Start/End: Original strand, 13740527 - 13740862
Alignment:
Q  21 gcaggctttacttggagtcatatttatttttgtttgtgattttgctacttgttgtttgtctgaggtgaacttctaggggcatgttttagttatgggggta 120  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13740527 gcaggctttacttggagtcatatttgtttttgtttgtaattttgctacatgttgtttgtctgaggtgaacttctaggggcatgttttagttatgggggta 13740626  T
Q  121 ttgtggagtggagtgttttgtattgttctgtgccactcctcttgagtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcgg 220  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| | | |||||||||    
T  13740627 ttgtggagtggagtgttttgtattgttctgtgccacttctcttgagtcatggtctgacaatgtgtttataagtggagacaatcctcgcctcataagtcgg 13740726  T
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    ||||||| ||||||||||||| |||||||||||||||||||  || |||||| ||| ||||||||||| |||||||  ||||||||||| | ||||||||    
T  13740727 ttttgtgaggttgtgttaggctcaaccacgatttctaatattatattagagcctctgcaagatccattaggtcaccatctatcaggttttccctatcggg 13740826  T
Q  321 ccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||||||| | |||||| |||||    
T  13740827 ccacccacaatttatatccacaaaccaagttcaata 13740862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 21 - 356
Target Start/End: Original strand, 13746027 - 13746362
Alignment:
Q  21 gcaggctttacttggagtcatatttatttttgtttgtgattttgctacttgttgtttgtctgaggtgaacttctaggggcatgttttagttatgggggta 120  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13746027 gcaggctttacttggagtcatatttgtttttgtttgtaattttgctacatgttgtttgtctgaggtgaacttctaggggcatgttttagttatgggggta 13746126  T
Q  121 ttgtggagtggagtgttttgtattgttctgtgccactcctcttgagtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcgg 220  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| | | |||||||||    
T  13746127 ttgtggagtggagtgttttgtattgttctgtgccacttctcttgagtcatggtctgacaatgtgtttataagtggagacaatcctcgcctcataagtcgg 13746226  T
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    ||||||| ||||||||||||| |||||||||||||||||||  || |||||| ||| ||||||||||| |||||||  ||||||||||| | ||||||||    
T  13746227 ttttgtgaggttgtgttaggctcaaccacgatttctaatattatattagagcctctgcaagatccattaggtcaccatctatcaggttttccctatcggg 13746326  T
Q  321 ccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||||||| | |||||| |||||    
T  13746327 ccacccacaatttatatccacaaaccaagttcaata 13746362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 169 - 356
Target Start/End: Original strand, 13353195 - 13353382
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | |||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||||  |    
T  13353195 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 13353294  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  13353295 gagcctctccaagatccattgggccacctgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaata 13353382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 169 - 356
Target Start/End: Original strand, 33796320 - 33796507
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | |||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||||  |    
T  33796320 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 33796419  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  33796420 gagcctctccaagatccattgggccacctgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaata 33796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 169 - 355
Target Start/End: Complemental strand, 12330269 - 12330083
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||||||||||||||||||| ||| | ||| |||||| | | ||| |||||||||| |||||||||||||||||||||||||||||||||||||  |    
T  12330269 atggtctgacaatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatca 12330170  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaat 355  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||    
T  12330169 gagcctctccaagatccattgggccacctgctatcaggtttccgccatcgggccacccaccatttatgtccacgaaccaagcccaat 12330083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 6543034 - 6542846
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||||||||||||||||||||||| ||| | ||||| |||| | | ||| |||||||||||||||||||||| ||||||||||||||| || ||||||      
T  6543034 gatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagacccaaccacgatttcaaagatggtatc 6542935  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||| ||||||| ||||||||||||    
T  6542934 agagcctcttcaagatccattgggtcacttgctatcaggtttccgttatcgggtcacccaccatttatgtccacgaaccaagtccaata 6542846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 169 - 356
Target Start/End: Complemental strand, 4868903 - 4868715
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| ||| |||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  4868903 atggcctggcaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 4868804  T
Q  269 gagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| | |||||||||||  |||| |||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||    
T  4868803 gagcctcctccaagatccgctgggccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaata 4868715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 165 - 356
Target Start/End: Original strand, 3680002 - 3680193
Alignment:
Q  165 agtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggt 264  Q
    |||||| |||||||||||||||||||| ||| | ||||||||   | | |||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  3680002 agtgatagtctgacaatgtgtttataactgggggcaatcctcctctcacaagtcgattttgtggggttgtgttaggcccaaccacaatttctaagatggt 3680101  T
Q  265 aatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |  ||| | ||||||| |||||| |||||||||||||| ||||||||||||||||| || |||| |||||| ||||| | ||||| ||||||    
T  3680102 atcagaccctctccaaaatccatcgggtcacctgctattaggtttccgctatcgggtcatccaccatttatgtccacaaaccaagcccaata 3680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 183 - 356
Target Start/End: Original strand, 33494547 - 33494720
Alignment:
Q  183 tgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaaga 282  Q
    ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||| | ||| | |||    
T  33494547 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagaacctcttcgaga 33494646  T
Q  283 tccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  ||||| | ||||| ||||| ||||||    
T  33494647 tccattgggtcacctgctatcaggtttccactatcgggccacccaccgtttatgttcacgaaccaagcccaata 33494720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 174 - 356
Target Start/End: Original strand, 9705019 - 9705200
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| ||| | ||||| |||| | | |||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||||     
T  9705019 ctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcc 9705118  T
Q  274 t-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    | |||||||||   ||||| |||||||||||||||||||  ||||||||||||||| |||||| ||||  | ||||||||||||    
T  9705119 tcctccaagatttgttgggccacctgctatcaggtttccattatcgggccacccaccatttatgtcca--aaccaagtccaata 9705200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 174 - 341
Target Start/End: Complemental strand, 33631889 - 33631723
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| |||  ||||||||||| | ||||  |||||||||||||||| |||||| ||||||| ||||| ||| ||| ||  ||||||    
T  33631889 ctgacaatgtgtttataagtgggaacaatcctcacctcataac-cggttttgtggggttgagttaggtccaaccatgatttttaagatgatatcagagca 33631791  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||| |||||| |||||    
T  33631790 tctccaagatctattgggtcacctgatatcaggtttctgctatcgggacacccaccatttatgtccac 33631723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 176 - 318
Target Start/End: Original strand, 11085582 - 11085724
Alignment:
Q  176 gacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc 275  Q
    |||||| ||||||||| ||| | |||| ||||||| | ||| |||||||||| |||||||||||| |||| |||||||||||| |||||  |||||| ||    
T  11085582 gacaatatgtttataagtgggggcaattctcacttcacaagccggttttgtgcggttgtgttaggtccaatcacgatttctaagatggttttagagcctc 11085681  T
Q  276 tccaagatccattgggtcacctgctatcaggtttccgctatcg 318  Q
    |||||||| | ||||| ||||||||||||||||||||||||||    
T  11085682 tccaagatacgttgggccacctgctatcaggtttccgctatcg 11085724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 221 - 341
Target Start/End: Original strand, 32290774 - 32290894
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    |||||| ||||||||||||||| ||| ||||||||||| |||||| |||||||||||||| |||||| ||| ||||| ||||||| ||| ||||||||||    
T  32290774 ttttgtagggttgtgttaggccaaacaacgatttctaagatggtattagagcatctccaatatccatcgggccacctactatcagattttcgctatcggg 32290873  T
Q  321 ccacccacaatttatatccac 341  Q
    |||||||| |||||| |||||    
T  32290874 ccacccaccatttatgtccac 32290894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 343
Target Start/End: Original strand, 30256572 - 30256745
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||| ||||||||||||||||| ||| | |||||||||  | | ||  |||||||||||||||||||||||||||||||||||||||||  |||||  |    
T  30256572 atggtttgacaatgtgtttataactgggggcaatcctcaactcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaggtggtatca 30256671  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    |||| | ||||| |||||||||| | | ||||||||||||| || ||||| ||||||| | |||||| |||||||    
T  30256672 gagcctttccaaaatccattgggccgcatgctatcaggttttcgatatcgagccaccc-ccatttatgtccacga 30256745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 174 - 319
Target Start/End: Original strand, 8026388 - 8026533
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||     
T  8026388 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcc 8026487  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgg 319  Q
    ||| || |||   ||||| |||||| |||||||||| || ||||||    
T  8026488 tcttcacgatttgttgggccacctgttatcaggttttcgttatcgg 8026533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 356
Target Start/End: Complemental strand, 6400936 - 6400758
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||| ||||||||| ||||| |||||||||| | | ||| ||||||||||||||        ||||||||||||||| ||| ||||||  |    
T  6400936 atggcctgacaatatgtttataagtggaggcaatcctcacctcacaagccggttttgtggggt--------gcccaaccacgatttttaagatggtatca 6400845  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
     ||| ||||||| ||| || |||||||||||||||||||||| |||||||| |||||||| |||||| ||||||| ||||| ||||||    
T  6400844 aagcctctccaaaatctat-gggtcacctgctatcaggtttctgctatcggaccacccaccatttatgtccacgaaccaagcccaata 6400758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 21690721 - 21690871
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| || ||||||||||||||||||||| |||||||||||||||||||||||  | |||     
T  21690721 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaatatggtatcaaagcc 21690820  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccac 324  Q
    ||| || ||| | ||||| |||||| ||||| ||||||| |||||||||||    
T  21690821 tcttcacgattctttgggccacctgttatcatgtttccgttatcgggccac 21690871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 176 - 335
Target Start/End: Complemental strand, 15082226 - 15082066
Alignment:
Q  176 gacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat- 274  Q
    |||||||||||||||| |||| ||| ||||||| | | ||| |||||||||||| ||||||||||||||| |||||||||||||||||||  ||| | |     
T  15082226 gacaatgtgtttataagtgga-acagtcctcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcagaacctc 15082128  T
Q  275 ctccaagatcc-attgggtcacctgctatcaggtttccgctatcgggccacccacaatttat 335  Q
    ||| |||||||  ||||  |||||||||||||||||||  ||||||||||||||| ||||||    
T  15082127 ctctaagatccgtttggaccacctgctatcaggtttccattatcgggccacccaccatttat 15082066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 8567051 - 8566960
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||| ||| |||||||||||| | | ||  |||||||||||||||||||||||||||||||||||||||||    
T  8567051 gtgatggtctgacaatgtgtttataagtgg-gacaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaa 8566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 316
Target Start/End: Original strand, 6054163 - 6054310
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||||||||| ||||||||| ||  ||||||| |||| | ||||||| |||||||||| | ||||||| | |||||||||||||||| ||| ||  |    
T  6054163 atggtctgacaatctgtttataagtgaggacaatcatcacctcataagtcagttttgtgggatcgtgttagactcaaccacgatttctaagatgatatca 6054262  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctat 316  Q
    || | ||| |||||| |||| || ||||||||||||||||||||||||    
T  6054263 gaacctcttcaagattcattaggccacctgctatcaggtttccgctat 6054310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 4868667 - 4868578
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  4868667 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 4868578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 317
Target Start/End: Complemental strand, 7638935 - 7638790
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagag 271  Q
    |||| ||||| ||||||||||||  ||||||| |||| | | |||  ||||||||| |||||||||||| ||||| | ||||||||| | | ||  ||||    
T  7638935 gtctaacaatatgtttataaatgaggacaatcttcacctcacaagctggttttgtgcggttgtgttaggtccaactatgatttctaagaagatatcagag 7638836  T
Q  272 catctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    | ||||||||||| ||||| ||||||||||||||||||||||||||    
T  7638835 cttctccaagatctattggatcacctgctatcaggtttccgctatc 7638790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 349
Target Start/End: Original strand, 24554110 - 24554290
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||||||||||||| | ||||||| ||| | ||||| |||| | | ||| ||||||||||| |||||||||| | ||||||  |||||||| ||||||      
T  24554110 gatggtctgacaatatatttataagtgggggcaatcttcacctcacaagccggttttgtggagttgtgttagtctcaaccataatttctaacatggtatc 24554209  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||  ||| ||||||||||| || |||||||||||||||| |||||||| | |||||||| |||||| || |||| |||||    
T  24554210 agagtgtcttcaagatccatt-ggccacctgctatcaggttaccgctatcagaccacccaccatttatgtcaacgaaccaag 24554290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 11721900 - 11721988
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| ||||| ||||||||| ||| | |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  11721900 tggtctaacaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 11721988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 17147886 - 17147798
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||| || ||||||| |||||| ||||||| ||||| ||||||    
T  17147886 agagcctctccaacatccattgggtcacctgctatcaggtttccgctatcaggtcacccaccatttatgtccacgaaccaagcccaata 17147798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 306
Target Start/End: Original strand, 27653216 - 27653348
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| |  ||||||||| | | |||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||     
T  27653216 ctgacaatttgtttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatatggtatcagagcc 27653315  T
Q  274 tctccaagatccattgggtcacctgctatcagg 306  Q
    ||| || |||   ||||| |||||| |||||||    
T  27653316 tcttcacgattgtttgggccacctgttatcagg 27653348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 326
Target Start/End: Complemental strand, 5572699 - 5572549
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||| ||||||||| ||| | | |||||||| | | ||| |||||| |||||||| |||| |||||||||||||||||||||||||||  ||||| |    
T  5572699 tgacaatttgtttataagtgggggccatcctcacctcacaagccggttt-gtggggttttgttcggcccaaccacgatttctaatatggtatcagagcct 5572601  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    || || ||| | ||||| | |||| ||||||||||||| |||||||||||||    
T  5572600 cttcacgattctttgggccgcctgttatcaggtttccgttatcgggccaccc 5572549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 30256812 - 30256902
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30256812 ctgacaatatgtttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 30256902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 174 - 342
Target Start/End: Complemental strand, 2736487 - 2736318
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||| ||||||||||||| ||| | |||| ||||| | | ||||||||||||| || |||||||| ||| ||||||||||||||| ||| ||  |||||     
T  2736487 ctgataatgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgttaagcctaaccacgatttctaaaatgatatcagagcc 2736388  T
Q  274 t-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacg 342  Q
    |  | ||||||| |||||| |||||||||| ||||||||| |||||| |||||||  |||||| ||||||    
T  2736387 tgattcaagatctattgggccacctgctattaggtttccgttatcggaccacccatcatttatgtccacg 2736318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 6400710 - 6400629
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacg 250  Q
    |||| |||||||||||||||||| ||||| |||||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  6400710 atggcctgacaatgtgtttataagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgttagacccaaccacg 6400629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 13740915 - 13740999
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| |||   |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||    
T  13740915 ctgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaa 13740999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 13746415 - 13746499
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| |||   |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||    
T  13746415 ctgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaa 13746499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 174 - 317
Target Start/End: Original strand, 3713341 - 3713484
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| | ||| |||||||||| | | ||| || ||||||  ||||||||||||| ||||||| |||||||| ||| ||  |||||     
T  3713341 ctgacaatgtgtttataagttgaggcaatcctcacatcaaaagccgattttgtaaggttgtgttaggcacaaccacaatttctaagatgatacgagagcc 3713440  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    |||||||||  ||||||  |||||| ||||| ||||||||||||    
T  3713441 tctccaagacacattggaccacctggtatcaagtttccgctatc 3713484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 229 - 348
Target Start/End: Complemental strand, 6237737 - 6237618
Alignment:
Q  229 ggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccac 328  Q
    ||||||||||| | ||| ||||| |||||| |||||| |||||  ||| |||||||||||||  ||| ||||| ||||||||||||||||| ||||||||    
T  6237737 ggttgtgttagactcaatcacgacttctaagatggtattagagtctcttcaagatccattggaccacttgctaccaggtttccgctatcggaccacccac 6237638  T
Q  329 aatttatatccacgagccaa 348  Q
     |||||| ||||||| ||||    
T  6237637 catttatgtccacgaaccaa 6237618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 312
Target Start/End: Complemental strand, 8001626 - 8001496
Alignment:
Q  183 tgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcc---a 279  Q
    ||||||||| ||| | ||||| |||| | |||||||| |||||| |||||||||||||||||||||| |||||||| ||||||  ||||  |||||   |    
T  8001626 tgtttataagtgggggcaatcttcacctcataagtcgattttgttgggttgtgttaggcccaaccacaatttctaagatggtatcagag--tctccttaa 8001529  T
Q  280 agatccattgggtcacctgctatcaggtttccg 312  Q
    |||||| ||||| ||||||||||||||||||||    
T  8001528 agatccgttgggccacctgctatcaggtttccg 8001496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 12330380 - 12330290
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||||||||||||||||||| ||| | |||||||||  | | ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  12330380 atggtctgacaatgtgtttataagtgggg-caatcctcatctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaata 12330290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 27772713 - 27772804
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  27772713 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctaatatggta 27772804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 326
Target Start/End: Original strand, 19712722 - 19712867
Alignment:
Q  183 tgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtg--ttaggcccaaccacgatttctaatatggtaatagagcatctccaa 280  Q
    ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||  |||||||||||||| |||||||| ||||||  ||||| ||| ||     
T  19712722 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtgttaggcccaaccaccatttctaagatggtatcagagcctcttcac 19712821  T
Q  281 gatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| | ||||| |||||| ||||||||||||| ||| ||| |||||    
T  19712822 gattctttgggccacctgttatcaggtttccgttattgggtcaccc 19712867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 341
Target Start/End: Original strand, 3921603 - 3921723
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgg 319  Q
    ||||||| |||| ||||||||   ||||| ||||||||||||||||  ||||| ||| ||||||||||||| ||||||||||||| ||||||||||| ||    
T  3921603 gttttgtagggtcgtgttaggtttaaccatgatttctaatatggtatcagagcctcttcaagatccattggatcacctgctatcaagtttccgctat-gg 3921701  T
Q  320 gccacccacaatttatatccac 341  Q
    ||| ||||  |||||| |||||    
T  3921702 gccgcccatcatttatgtccac 3921723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 9705256 - 9705337
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||| ||||||||||||||||||    
T  9705256 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaa 9705337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 25065184 - 25065095
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||| ||||||||| | | | |||||||||| | | ||| ||||||||||||||||||||||||||||| |||||||||||    
T  25065184 atggtctgacaatatgtttataagtaggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaa 25065095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 6065968 - 6066049
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccac 249  Q
    ||||||||||||||||||||||||||  || | |||||||||| | | |||| |||||||||||||||||||||||||||||||    
T  6065968 gtgatggtctgacaatgtgtttataa--gggggcaatcctcacctgacaagttggttttgtggggttgtgttaggcccaaccac 6066049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 16570158 - 16570242
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||  || |  ||||||||| | | ||||||||||||||||||||||||||||||||||| |||||||||    
T  16570158 ctgacaatgtgtttataagcgggggtaatcctcacgtaacaagtcggttttgtggggttgtgttaggcccaaccatgatttctaa 16570242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 31961036 - 31961124
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||||| ||| ||||| |||||| ||||||  ||||| ||||||    
T  31961036 agagcctctccaagatccattgggccacctgctatcaggtttctgctatcgtgccccccaccatttatgtccacggaccaagcccaata 31961124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 5572469 - 5572386
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    |||||||| ||||||||| | | | | |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||    
T  5572469 ctgacaatttgtttataagttggggccatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttcta 5572386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 27656457 - 27656543
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| |  ||||||||| | | ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  27656457 ctgacaatttgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaata 27656543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 2753250 - 2753331
Alignment:
Q  167 tgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaacca 248  Q
    ||||| ||||||||||||||||||| ||| |  ||||||||| | | ||| |||||||||||||||||||||||||||||||    
T  2753250 tgatgatctgacaatgtgtttataagtgggggtaatcctcacctcacaaggcggttttgtggggttgtgttaggcccaacca 2753331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 8026628 - 8026689
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  8026628 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 8026689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 19639203 - 19639114
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| |||||||||||| | | ||  |||||| |||||| ||||||||| |||||||||||||||||    
T  19639203 atggcctgacaatgtgtttataagtggggacaatcctcacctcacaaaccggtttagtggggctgtgttaggtccaaccacgatttctaa 19639114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 6623470 - 6623411
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  6623470 caatcctcaccttacaagccggttttgtggggttgtgttaggtccaaccacgatttctaa 6623411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 30505595 - 30505654
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  30505595 agagcctctccaagatgcattgggtcacctgctatcaggtttcccctatcgtgccaccca 30505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 2736252 - 2736168
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| |||||||||||| | ||||   | |||||| || ||||||||| ||||||||||||||||||    
T  2736252 ctgacaatgtgtttataagtggggacaatcctcacctcataaacagattttgtaggattgtgttagacccaaccacgatttctaa 2736168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 17147745 - 17147661
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| ||||||| ||| | |||||||||| | | ||| ||||||||||||||| ||||||| |||||||| ||||||||    
T  17147745 ctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggtccaaccaccatttctaa 17147661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 19712951 - 19713035
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| ||| | |||| ||||| | | ||| |||||||||||| ||||||||||||||||||| ||||||||    
T  19712951 ctgacaatttgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccaccatttctaa 19713035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 12330026 - 12329943
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||||||||||| ||| | |||||||||| | | |||  | ||||||| |||||||||||||||||||||||||| |||||    
T  12330026 acaatgtgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaaccacgatttgtaata 12329943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 4161885 - 4161847
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4161885 gttttgtggggttgtgttaggcccaaccacgatttctaa 4161847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 4223505 - 4223467
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4223505 gttttgtggggttgtgttaggcccaaccacgatttctaa 4223467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 6054396 - 6054486
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||| || ||||||| ||| | |||||||||| | | ||  || |||||| |||||||||||| ||||||||||||||||||    
T  6054396 gatggtctgacaaggtatttataagtgggggcaatcctcacctcacaaaccgattttgtagggttgtgttagacccaaccacgatttctaa 6054486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 6542799 - 6542710
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||| ||||||||||||| | ||||| |||| | | ||  ||||||||| ||||||||||| | |||||||||||||||||    
T  6542799 gatggtctgacaatctgtttataaatgggg-caatcatcacctcacaaaccggttttgtagggttgtgttaagtccaaccacgatttctaa 6542710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 12199895 - 12199805
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggccc-aaccacgatttctaa 258  Q
    ||||||||||||| ||||||||| ||| | ||||| |||| | | ||||| ||||||||  |||||||||||||| |||||||||||||||    
T  12199895 atggtctgacaatatgtttataagtgggggcaatcatcacctcacaagtccgttttgtgatgttgtgttaggcccaaaccacgatttctaa 12199805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 340
Target Start/End: Complemental strand, 27993722 - 27993560
Alignment:
Q  180 atgtgtttataaatg-gagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagag-catctc 277  Q
    ||||||||||||||| | || ||||||||| | | || |  |||||||| |||||||||||  ||| | ||||||| ||| ||||||  |||| | ||||    
T  27993722 atgtgtttataaatgagggaaaatcctcacctcacaacttagttttgtgaggttgtgttagatccatctacgatttttaaaatggtatcagagtcttctc 27993623  T
Q  278 caagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatcca 340  Q
    ||||||||||| |||||| |   |||||||||||||||||  |||||| || |||||||||||    
T  27993622 caagatccattaggtcacttatcatcaggtttccgctatcaagccacctaccatttatatcca 27993560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 10145835 - 10145751
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||||||||||||||| | ||||||  |||| | | ||||| ||||||| |||||||||||||| ||||||| ||||||||    
T  10145835 ctgataatgtgtttataaatagggacaattttcacctcacaagtcagttttgtagggttgtgttaggctcaaccacaatttctaa 10145751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 15081999 - 15081907
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||| |||||||| |||||| || ||| | ||||||| |  | | ||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  15081999 gatggactgacaatatgtttacaagtgggggcaatccttaactcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaata 15081907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 20373616 - 20373660
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||    
T  20373616 ttttgtggggttgtgttaggcccaaccacgatttataagatggta 20373660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 21214976 - 21215052
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcc 242  Q
    |||||||||| ||||||||||||||| |   | ||||| |||| | | |||||||||||||||||||||||||||||    
T  21214976 gtgatggtctcacaatgtgtttataagtttgggcaatcatcacctcaaaagtcggttttgtggggttgtgttaggcc 21215052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 32290961 - 32291043
Alignment:
Q  173 tctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttct 256  Q
    |||| |||||||||||||||||| | |||||||||  |   | |||||||||||||| || |||||||||||||||||||||||    
T  32290961 tctggcaatgtgtttataaatgggg-caatcctcatctcgcaggtcggttttgtgggcttatgttaggcccaaccacgatttct 32291043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 15600931 - 15600997
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgt 236  Q
    |||||||| ||| ||||||||| ||| | |||||||||||| | ||||| |||||||||||||||||    
T  15600931 tggtctgataatttgtttataagtgggggcaatcctcacttcacaagtcagttttgtggggttgtgt 15600997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 27772945 - 27773031
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| | |||||||||| | | |||  ||||||||||| |||||||| |||||||||  ||||||||||    
T  27772945 ctgacaatttgtttataagtgggggcaatcctcacctcacaagctggttttgtgggattgtgttaagcccaaccataatttctaata 27773031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 28868042 - 28867972
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggccca 244  Q
    |||||||| | ||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||    
T  28868042 ctgacaatttatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggccca 28867972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 12885103 - 12885144
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatg 262  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  12885103 ttttgtggggttgtgttaggtctaaccacgatttctaatatg 12885144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 16722900 - 16722811
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttc 255  Q
    ||||||| |||| ||| ||||||||| |||   |||| ||||| | | ||| || ||||||||||||||||||||||||||||| |||||    
T  16722900 gtgatggcctgataatctgtttataagtgggagcaattctcacctcacaagccgattttgtggggttgtgttaggcccaaccactatttc 16722811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 342
Target Start/End: Complemental strand, 28648914 - 28648865
Alignment:
Q  293 cacctgctatcaggtttccgctatcgggccacccacaatttatatccacg 342  Q
    |||||||||| |||||||||||||||||| |||||| |||||||| ||||    
T  28648914 cacctgctattaggtttccgctatcgggctacccaccatttatattcacg 28648865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 10659515 - 10659550
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttc 255  Q
    |||||||||||||||||||||| |||||||||||||    
T  10659515 gttttgtggggttgtgttaggctcaaccacgatttc 10659550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 5648863 - 5648825
Alignment:
Q  297 tgctatcaggtttccgctatcgggccacccacaatttat 335  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  5648863 tgctatcaggtttccgctatcgggccactcactatttat 5648825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 7915849 - 7915932
Alignment:
Q  174 ctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| |  |||||||||| | | ||| || ||||||||||||||  ||| ||||||||||||||||||    
T  7915849 ctgacaatgtgtttataagtggggggcaatcctcacctcacaagccgattttgtggggttgt--tagacccaaccacgatttctaa 7915932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 20660920 - 20661010
Alignment:
Q  222 tttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccg 312  Q
    ||||||||||| ||||||||| ||| || | |||||  || |||  ||||| ||||||||||| ||||| |||||| ||||||||| ||||    
T  20660920 tttgtggggttatgttaggcctaacgacaaattctatgattgtatcagagcctctccaagatctattggatcacctactatcaggtatccg 20661010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 349
Target Start/End: Complemental strand, 30656660 - 30656542
Alignment:
Q  231 ttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaa 330  Q
    |||||||||  ||||||||| ||| ||| ||| ||   |||| |||| || ||| ||||||||||||||||||| |||| |||||||||| ||| ||| |    
T  30656660 ttgtgttagatccaaccacggtttttaagatgatacgtgagcctctctaaaatctattgggtcacctgctatcatgttttcgctatcgggtcacacacga 30656561  T
Q  331 tttatatccacgagccaag 349  Q
    | ||| |||| || |||||    
T  30656560 tctatgtccatgaaccaag 30656542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 2737255 - 2737178
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacga 251  Q
    |||| ||||||||||||| ||| | |||| ||||| | | ||||||||||||| || |||||||| ||| ||||||||    
T  2737255 ctgataatgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgttaagcctaaccacga 2737178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 3680237 - 3680298
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtg 227  Q
    |||||||||||||||||||||||||| ||| | ||||| |||| | | |||| |||||||||    
T  3680237 gtgatggtctgacaatgtgtttataagtgggggcaatcatcacctcacaagttggttttgtg 3680298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 20830617 - 20830694
Alignment:
Q  279 aagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||| ||| | ||||||||||||||  ||||||||  ||||||  |||||| ||||||| ||||| ||||||    
T  20830617 aagatccattaggttatctgctatcaggtttttgctatcggatcacccatcatttatttccacgaaccaagcccaata 20830694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 30849443 - 30849318
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    |||||||||||||||||| ||| || ||  ||||||||||| ||| ||  | ||   ||  ||||||||||||  |||||||||| ||||||||||||      
T  30849443 cggttttgtggggttgtgctagacctaattacgatttctaagatgatatcaaagtccctttaagatccattggaccacctgctattaggtttccgctaat 30849344  T
Q  318 gggccacccacaatttatatccacga 343  Q
    | ||||| ||| |||||| |||||||    
T  30849343 gagccactcaccatttatgtccacga 30849318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 5648753 - 5648673
Alignment:
Q  178 caatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||| |   ||||||| |||| | | ||| |||||||||| |||||||||||| |||||||  ||||||||    
T  5648753 caatgtgtttataattaaggacaatcatcacctcacaagccggttttgtgaggttgtgttaggtccaaccataatttctaa 5648673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 20864050 - 20864094
Alignment:
Q  276 tccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    |||||||||||||||| |||||||||| |||||||| ||| ||||    
T  20864050 tccaagatccattgggccacctgctattaggtttcctctaccggg 20864094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 6e-59; HSPs: 98)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 169 - 356
Target Start/End: Original strand, 29469599 - 29469786
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  29469599 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 29469698  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||| |||||||  |||| ||||||    
T  29469699 gagcctctccaagatccattgggccacctgttatcaggcttccgctatcgggccacccaccatttatgtccacgaatcaagcccaata 29469786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 174 - 356
Target Start/End: Original strand, 25620135 - 25620317
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||||     
T  25620135 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcc 25620234  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||| ||||||    
T  25620235 tctccaagatccattgggccacctgctatcaggtttccgctattgggccacccaccatttatgtccacgaaccaagcccaata 25620317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 169 - 349
Target Start/End: Original strand, 21861288 - 21861468
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||  | |||||||||| ||| ||| |||||||||||| ||||||||||||||||||| |||||||| ||||||  |    
T  21861288 atggcctgacaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagatggtatca 21861387  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||    
T  21861388 gagcctctccaagatccattgggccacctgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaag 21861468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 169 - 356
Target Start/End: Complemental strand, 36277316 - 36277129
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | |||||||||| | | |||||| ||||||||||||||||||| |||||||||||||||||| ||| ||  |    
T  36277316 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgttagtcccaaccacgatttctaagatgttatca 36277217  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||| ||||||| ||||| ||||||    
T  36277216 gagcctctccaagatccattgggccacctactatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaata 36277129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 169 - 356
Target Start/End: Original strand, 1596588 - 1596774
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| ||||||||||||| |||| ||| | |||||||||| ||| ||| |||||| |||||||||||||||||| |||||| |||||||| ||||||  |    
T  1596588 atggcctgacaatgtgttaataagtgggggcaatcctcaccttacaagccggttt-gtggggttgtgttaggcctaaccacaatttctaagatggtatca 1596686  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  1596687 gagcctctccaagatccattgggccacatgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaata 1596774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 33834209 - 33834372
Alignment:
Q  194 ggagacaatcctcactttataagtcggtttt-gtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggt 292  Q
    ||||||||||||||| |||| |  ||||||| ||||||||||||||||||||||||| |||||||| ||||||  ||||| ||||||||||||||||||     
T  33834209 ggagacaatcctcaccttatgaaccggtttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattgggc 33834308  T
Q  293 cacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||| ||||| ||||||    
T  33834309 cacctgctatcaggttttccctatcgggccacccaccatttatgtccacgaaccaagcccaata 33834372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 356
Target Start/End: Complemental strand, 33996391 - 33996217
Alignment:
Q  179 aatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcc 278  Q
    ||||| ||||||| ||| | ||||| |||| | | ||||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||| |||||    
T  33996391 aatgtatttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcctctcc 33996292  T
Q  279 aagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |   ||||||||| ||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||| ||||||    
T  33996291 a---tccattgggccacctgctatcaggtttccgcaatcgggccacccaccatttatgtccacgaaccaagcccaata 33996217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 165 - 343
Target Start/End: Complemental strand, 31485753 - 31485575
Alignment:
Q  165 agtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggt 264  Q
    |||||||| |||||||||| ||||||| ||| | |||||||||| | | ||| ||||||||||  ||||||||||||| |||||| |||||||| |||||    
T  31485753 agtgatggcctgacaatgtttttataagtgggggcaatcctcacctgacaagccggttttgtgaagttgtgttaggcctaaccacaatttctaagatggt 31485654  T
Q  265 aatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    |  |||||  || |||||||||||||| ||||| ||||||||||| | |||||||||||||||| ||||||||||||||    
T  31485653 ataagagccgctacaagatccattgggccacctactatcaggttttcactatcgggccacccaccatttatatccacga 31485575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 174 - 326
Target Start/End: Original strand, 34027392 - 34027544
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  34027392 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtattagagcc 34027491  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| || ||| | ||||| |||||| ||||||||||||  |||||||||||||    
T  34027492 tcttcacgattctttgggccacctgttatcaggtttccattatcgggccaccc 34027544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 169 - 356
Target Start/End: Original strand, 4886323 - 4886510
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||| ||||||| ||||| | |||||||||| | | ||| |||||| | | |||||||||||||||||||||||||||||| ||||||  |    
T  4886323 atggcctgacaatatgtttattaatgggggcaatcctcacctcacaagccggtttggcgaggttgtgttaggcccaaccacgatttctaagatggtatca 4886422  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    | |  |||||||||||||||||| |||||||||||| |||||  |||||| ||||||||| |||||| ||||||| ||||| ||||||    
T  4886423 gggtctctccaagatccattgggccacctgctatcaagtttctactatcgagccacccaccatttatgtccacgaaccaagcccaata 4886510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 174 - 356
Target Start/End: Complemental strand, 48661640 - 48661458
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||| ||||||  ||| | |||||||||| | | ||| |||||||||| | ||||||||| |||||||||||||||||||||| ||  |||||     
T  48661640 ctgacaatgtatttataggtgggggcaatcctcacctcacaagccggttttgtgagattgtgttagacccaaccacgatttctaatatgatatcagagcc 48661541  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||  |||| |||||| | |||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||| ||||||    
T  48661540 tctttaagaaccattgagccacctgctatcaggtttccgctttcgggccacccaccatttatgtccacgaaccaagcccaata 48661458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 169 - 317
Target Start/End: Complemental strand, 26240006 - 26239857
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||||||||||||||||||| ||| | |||||||||| | | |||||||| ||||||||||||||||| ||||||||| |||||||| ||||||  |    
T  26240006 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagatggtatca 26239907  T
Q  269 gagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    |||| | ||||||||||| ||||| |||||||||||||||||||| ||||    
T  26239906 gagcctcctccaagatccgttgggccacctgctatcaggtttccgttatc 26239857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 362
Target Start/End: Original strand, 31892151 - 31892339
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaa-ccacgatttctaatatggtaatagagca 273  Q
    ||||||||| ||||||| ||| |||||||||||| | | ||| ||||||||||| ||| |||||||||||| || |||| ||||| |||| |  |||||     
T  31892151 tgacaatgtatttataagtggggacaatcctcacctcacaagccggttttgtggagttatgttaggcccaaaccccgatctctaagatggaatcagagcc 31892250  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaatactgatg 362  Q
    ||||||||| | |||||| |||||||||||||||||||| |||| |||||||||| |||||| ||||||| ||||| |||||| |||||    
T  31892251 tctccaagacctattgggccacctgctatcaggtttccgttatcaggccacccaccatttatgtccacgaaccaagcccaataatgatg 31892339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 166 - 356
Target Start/End: Complemental strand, 3520133 - 3519942
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtg-gggttgtgttaggcccaaccacgatttctaatatggt 264  Q
    |||||||||||||||||||||||||| ||| | |||||||||| |   ||| ||||||| |  |||||||||||||  |||||||||||||| |  ||||    
T  3520133 gtgatggtctgacaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttataagggttgtgttaggttcaaccacgatttcttagttggt 3520034  T
Q  265 aatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |  ||||| |||||| ||||||||||| ||||||||||| ||||| |||||||||| ||||||| |||||| ||||||| ||||| ||||||    
T  3520033 atcagagcctctccatgatccattgggccacctgctatctggttttcgctatcgggacacccaccatttatgtccacgaaccaagcccaata 3519942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 170 - 326
Target Start/End: Complemental strand, 31257356 - 31257200
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatag 269  Q
    |||||||||||| | ||||||| ||| | ||||||| | || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  31257356 tggtctgacaatttatttataagtgggggcaatccttaattcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcag 31257257  T
Q  270 agcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| ||| || ||| | ||||| || ||| ||||||||||||| |||||||||||||    
T  31257256 agcttcttcacgattctttgggccatctgttatcaggtttccgttatcgggccaccc 31257200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 174 - 326
Target Start/End: Original strand, 40746264 - 40746416
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||  | |||||||||| | ||||| || ||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  40746264 ctgacaatttgtttataagtgagggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaatatggtattagagcc 40746363  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| || ||  | ||||| || ||| ||||||||||||| |||||||||||||    
T  40746364 tcttcacgaatctttggggcaactgttatcaggtttccgttatcgggccaccc 40746416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 166 - 356
Target Start/End: Complemental strand, 2315363 - 2315164
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat---- 261  Q
    ||||||||||||| |||| ||||||  ||||| |||| ||||| | ||||| ||||||||||||||||| |||| | ||| |||||||||||||||        
T  2315363 gtgatggtctgactatgtatttatatgtggaggcaattctcacctcataagccggttttgtggggttgtcttagactcaatcacgatttctaatatttct 2315264  T
Q  262 -----ggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
         |||| || ||| |||||||| ||||||||| ||||||||||||| ||||||| ||||| |||||||| |||||| ||||||| ||||| ||||||    
T  2315263 aaaatggtattatagcttctccaaggtccattgggccacctgctatcagatttccgcaatcggaccacccaccatttatgtccacgaaccaagcccaata 2315164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 174 - 349
Target Start/End: Complemental strand, 2404493 - 2404318
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| | | | ||||||||||   | ||||||||||| | ||| ||||||| || |||||||||||||||| ||||||  |||||     
T  2404493 ctgacaatgtgtttataagtaggggcaatcctcaccccacaagtcggttttatagggctgtgttaagctcaaccacgatttctaagatggtatcagagcc 2404394  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||| | | ||||||||||||||||||||||||||||||||||| || ||||| ||  ||||| ||||||| |||||    
T  2404393 tcttcgaaatccattgggtcacctgctatcaggtttccgctattggaccacctaccgtttatgtccacgaaccaag 2404318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 324
Target Start/End: Original strand, 10903085 - 10903234
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||| ||||||||| | | |  ||||||||| | | ||| ||||||||||| |||||||||| ||||||||||||| |||| ||| ||  ||||| |    
T  10903085 tgacaatatgtttataagtaggggtaatcctcacctcacaagccggttttgtggagttgtgttagccccaaccacgattactaaaatgatatcagagctt 10903184  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccac 324  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||| ||||    
T  10903185 ctccaagatccattgggccacctgttatcatgtttccgctatcggaccac 10903234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 174 - 326
Target Start/End: Original strand, 28080664 - 28080815
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| | | | ||||  |||||| | ||||||||||||||||||| ||||||  ||||||||||||||||| ||| ||  |||||     
T  28080664 ctgacaatgtgtttataagtaggg-caattttcacttcacaagtcggttttgtggggttatgttagatccaaccacgatttctaagatgatatcagagcc 28080762  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| ||||||| |||||| |||||||||||| |||||||||||| || |||||    
T  28080763 tcttcaagatctattgggccacctgctatcaagtttccgctatctggtcaccc 28080815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 29469834 - 29469926
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||| |||||||||||||||||| ||| | |||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  29469834 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgatttctaatat 29469926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 2544532 - 2544441
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2544532 ctgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttttaatatggta 2544441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 48243153 - 48243066
Alignment:
Q  167 tgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||||||||||||||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||    
T  48243153 tgatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 48243066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 199 - 317
Target Start/End: Original strand, 4506956 - 4507074
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctg 298  Q
    |||||||||| | | ||||||||||| |||||||||||||| |||||| ||||||||||| || |||  ||||| | | |||||||||||||||||||||    
T  4506956 caatcctcacctcacaagtcggttttatggggttgtgttagacccaactacgatttctaagattgtatcagagccttttcaagatccattgggtcacctg 4507055  T
Q  299 ctatcaggtttccgctatc 317  Q
    ||||||| |||||| ||||    
T  4507056 ctatcagatttccgttatc 4507074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 356
Target Start/End: Original strand, 22574661 - 22574782
Alignment:
Q  235 gttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaattta 334  Q
    ||||||| ||||||| |||||||  ||||||  ||||  |||||||||||||||||| |||||||||||||||||| |||||||| |||||||| |||||    
T  22574661 gttaggctcaaccacaatttctatgatggtataagagtctctccaagatccattgggccacctgctatcaggtttcagctatcggaccacccaccattta 22574760  T
Q  335 tatccacgagccaagtccaata 356  Q
    | || |||| ||||| ||||||    
T  22574761 tgtctacgaaccaagcccaata 22574782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 348
Target Start/End: Complemental strand, 44874657 - 44874489
Alignment:
Q  181 tgtgtttataaatggag-acaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcca 279  Q
    ||||||||||  ||||| |||||||||||  || ||| || |||| |||| |||||||||||| |||||| || ||||| ||||||  ||||  ||| ||    
T  44874657 tgtgtttatacgtggaggacaatcctcaccctacaagccgattttatgggcttgtgttaggccaaaccacaatgtctaagatggtatcagagtctcttca 44874558  T
Q  280 agatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||||||||||||||||||||||||||||||| | |||||| ||||||  |||||| || |||| ||||    
T  44874557 agatccattgggtcacctgctatcaggtttccacaatcgggtcacccatcatttatgtctacgaaccaa 44874489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 339
Target Start/End: Complemental strand, 48417554 - 48417435
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagag-catctccaagatccattgggtcacctgctatcaggtttccgctatcg 318  Q
    |||||||||||||||||||||||||||||| |||||| | |||||| ||||| | |||||  ||||||||||| |||||||||||  |||||||||||||    
T  48417554 gttttgtggggttgtgttaggcccaaccacaatttcttagatggtattagagccttctccttgatccattgggccacctgctatcttgtttccgctatcg 48417455  T
Q  319 ggccacccacaatttatatcc 339  Q
    || || |||| ||||||||||    
T  48417454 gg-caaccaccatttatatcc 48417435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 356
Target Start/End: Complemental strand, 9689130 - 9689008
Alignment:
Q  229 ggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccac 328  Q
    |||| |||||||||||||||| |||||| ||||||||  ||||| |||||||||||||||||  ||||||||||||||||||||||    ||||||||||    
T  9689130 ggttttgttaggcccaaccacaatttctgatatggtatcagagcctctccaagatccattggaccacctgctatcaggtttccgct----ggccacccac 9689035  T
Q  329 aatttatatccacgagccaagtccaata 356  Q
     ||||||  |||||| ||||| ||||||    
T  9689034 gatttat-gccacgaaccaagcccaata 9689008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 323
Target Start/End: Original strand, 21821852 - 21821954
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||  ||||| ||| |||||| | ||||| || |||||| |||||||||||||| |||    
T  21821852 ttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaagatacgttgggccaactgctagcaggtttccgctattggg 21821951  T
Q  321 cca 323  Q
    |||    
T  21821952 cca 21821954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 243 - 349
Target Start/End: Original strand, 20305358 - 20305468
Alignment:
Q  243 caaccacgatttctaatatggtaatagagcatctccaagatccattgg----gtcacctgctatcaggtttccgctatcgggccacccacaatttatatc 338  Q
    |||||||||||| ||| ||||||  ||||| ||| |||||||||||||    |||| ||||||||||||||||||||||||||||||||| |||||| ||    
T  20305358 caaccacgatttttaagatggtatcagagcctcttcaagatccattggatgggtcatctgctatcaggtttccgctatcgggccacccaccatttatgtc 20305457  T
Q  339 cacgagccaag 349  Q
    ||||| |||||    
T  20305458 cacgaaccaag 20305468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 21861523 - 21861612
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | |||||||||| ||| ||| || ||||||||||||||||||||||||||||| ||||||||    
T  21861523 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccgattttgtggggttgtgttaggcccaaccaccatttctaa 21861612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 174 - 327
Target Start/End: Complemental strand, 26562158 - 26562005
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | ||||| |||| | | ||| ||||||||||||||| |||||||| ||||||| |||||||||||||||  ||||      
T  26562158 ctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttatgttaggctcaaccaccatttctaatatggtatcagagtc 26562059  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
    ||| || ||| | ||||| |||||| ||||||||||||| |||| || ||||||    
T  26562058 tcttcacgattctttgggccacctgttatcaggtttccgttatcaggtcaccca 26562005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 32278978 - 32278889
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttc 255  Q
    |||||||||||||||||||||||||| ||| ||||||| |||| | ||||| |||||||||| ||||||||||||| ||||||| |||||    
T  32278978 gtgatggtctgacaatgtgtttataagtggggacaatcgtcacctcataagccggttttgtgaggttgtgttaggctcaaccaccatttc 32278889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 3038171 - 3038055
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagag 271  Q
    |||| ||||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||||||| ||  ||  ||||    
T  3038171 gtctaacaatgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagataatatcagag 3038072  T
Q  272 catctccaagatccatt 288  Q
    | ||| |||||||||||    
T  3038071 cctcttcaagatccatt 3038055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 10882275 - 10882179
Alignment:
Q  223 ttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgg 319  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||||| ||| || ||| | ||||| |||||| ||||||||||||| ||||||    
T  10882275 ttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcacgattctttgggccacctgttatcaggtttccgttatcgg 10882179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 21055046 - 21054954
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||||| ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||| ||||||||    
T  21055046 gtgatggcctgacaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 21054954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 34027626 - 34027710
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| ||| | |||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||    
T  34027626 ctgacaatttgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaa 34027710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 221 - 356
Target Start/End: Complemental strand, 36993346 - 36993211
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    ||||||||  |||||||||  ||||||| ||||||||| ||||||  ||||| ||| |||||||||||||| ||| ||||||||| |||||||||| ||     
T  36993346 ttttgtggaattgtgttagatccaaccatgatttctaagatggtatcagagcctcttcaagatccattgggccacgtgctatcagatttccgctattgga 36993247  T
Q  321 ccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||| |||||| | |||||  ||||| |||||    
T  36993246 ccacccactatttatgttcacgaatcaagttcaata 36993211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 166 - 265
Target Start/End: Complemental strand, 48243530 - 48243431
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||||||||||||||| ||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||| ||||| ||| ||||||    
T  48243530 gtgatggcctgacaatgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccatgatttttaagatggta 48243431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 335
Target Start/End: Complemental strand, 32279159 - 32278995
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||| ||||||||||||||||||| ||  |||||||||||| | | ||| | ||||||| | | ||||||| |||||||||| |||| | ||||        
T  32279159 gtgatgatctgacaatgtgtttataagtgtggacaatcctcacctaacaagccagttttgtagagctgtgttatgcccaaccaccatttttgatatc--- 32279063  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttat 335  Q
      ||||| ||||||| ||  |||||| ||||||||||||||||| ||||||||||||| |||| ||||||    
T  32279062 --agagcctctccaaaatttattgggccacctgctatcaggttttcgctatcgggccatccaccatttat 32278995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 47710434 - 47710526
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| || ||||||||||||||| ||| | |||||||||| | | ||| | |||||||||||||||||||||||||||||| ||||||||    
T  47710434 gtgatggccttacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaa 47710526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 47722090 - 47722182
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| || ||||||||||||||| ||| | |||||||||| | | ||| | |||||||||||||||||||||||||||||| ||||||||    
T  47722090 gtgatggccttacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaa 47722182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 257
Target Start/End: Original strand, 3392973 - 3393064
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    ||||||| |||||||||||||||||| ||| || ||| ||||| | | ||| || ||||||||||||||||||||||||||||| |||||||    
T  3392973 gtgatggcctgacaatgtgtttataagtggggaaaattctcacctcacaagccgattttgtggggttgtgttaggcccaaccaccatttcta 3393064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 6782880 - 6782951
Alignment:
Q  194 ggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||| |||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  6782880 ggaggcaatcctcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaacatggta 6782951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 17202178 - 17202269
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||| | |||| ||||  | | ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17202178 ctgacaatttgtttataagtgggggcaattctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggta 17202269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 31892387 - 31892470
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||| ||||||| ||| ||||||| |||| | | ||| ||||||||||||| |||||||||||||||||||||||||||    
T  31892387 tgacaatgtatttataagtggggacaatcttcacctcacaagccggttttgtggggatgtgttaggcccaaccacgatttctaa 31892470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 40121989 - 40121918
Alignment:
Q  194 ggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||||  || ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40121989 ggagacactcctcaccctacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggta 40121918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 2544304 - 2544214
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||||||| ||||||||| ||| | ||||| |||| ||| ||| | |||||||||||||||||||||||| |||||||||| |||||    
T  2544304 tggtctgacaatttgtttataagtgggggcaatcttcaccttacaagccagttttgtggggttgtgttaggccctaccacgatttttaata 2544214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 221 - 355
Target Start/End: Complemental strand, 18826526 - 18826392
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    ||||||||||||||||||||  ||||||  |||||||| ||| ||  ||||| ||| ||||||||| || | || |||||||||  |||||||||||| |    
T  18826526 ttttgtggggttgtgttaggttcaaccataatttctaagatgatatcagagcctcttcaagatccactgagccatctgctatcaaatttccgctatcgag 18826427  T
Q  321 ccacccacaatttatatccacgagccaagtccaat 355  Q
    |||||||| ||||||  |||||| ||||| |||||    
T  18826426 ccacccaccatttatgaccacgaaccaagcccaat 18826392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 3519923 - 3519863
Alignment:
Q  296 ctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  3519923 ctgctatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaata 3519863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 6634854 - 6634938
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| ||| | |||||||||| | |||||   ||||||||||||||||||||||||||||| |||||||||    
T  6634854 ctgacaatttgtttataagtgggggcaatcctcacctcataagctagttttgtggggttgtgttaggcccaaccatgatttctaa 6634938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 42985216 - 42985124
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||||||||||| ||||| |||||||||| | | |||||| ||||||| ||||||||||| | ||||||  ||||||||    
T  42985216 gtgatggtttgacaatgtgtttataagtggaggcaatcctcacctcacaagtcgattttgtgaggttgtgttagactcaaccataatttctaa 42985124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 2401356 - 2401439
Alignment:
Q  171 ggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||||||||||||||||||| ||  ||||||| |||||| | |||||| ||||||| | ||||||||||| ||||||||||||    
T  2401356 ggtctgacaatgtgtttataagtgtggacaatcttcacttcacaagtcgattttgtgagattgtgttaggctcaaccacgattt 2401439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 43085621 - 43085538
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| |||||||||| ||| | |||||||||| | | |||| |||||||||||||||||||| || ||||||||||||||||    
T  43085621 tgacaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgttaagctcaaccacgatttctaa 43085538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 10882089 - 10882004
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    ||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||| | ||||||||||||||||||||||||||    
T  10882089 tgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggtt-tattaggcccaaccacgatttctaatat 10882004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 36277078 - 36276992
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||| ||| |||||| ||||| | | |||  |||||| |||| |||||||||||| |||||||||||||||    
T  36277078 gtctgacaatgtgtttataagtggggacaattctcacctcacaagcaggttttatgggattgtgttaggcctaaccacgatttctaa 36276992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 36993164 - 36993075
Alignment:
Q  169 atggtctgacaatgtgtttataaat-ggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||| | |||| |||| ||||| | | |||  |||||||||||||||||||||||||||||| |||||||||    
T  36993164 atggtctgacaatgtgtttataagtaggag-caatgctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaa 36993075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 1596830 - 1596911
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| ||||||| ||| | |||||||||| ||| ||| ||||||||| |||||||||||||||||||||| ||| ||||    
T  1596830 acaatgtttttataagtgggggcaatcctcaccttacaagccggttttgtagggttgtgttaggcccaaccacaattactaa 1596911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 43688249 - 43688161
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | ||||||| || |   ||| ||| |||||||||||||||||||||||||||||||||||||    
T  43688249 atggcctgacaatgtgtttataagtgggggcaatccttacctctcaagccgg-tttgtggggttgtgttaggcccaaccacgatttctaa 43688161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 1000560 - 1000632
Alignment:
Q  186 ttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| ||| | |||||||||| ||| ||| ||||||||||||||||| || ||||||||||||||||||||    
T  1000560 ttataagtgggggcaatcctcaccttacaagacggttttgtggggttgtctttggcccaaccacgatttctaa 1000632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 302
Target Start/End: Complemental strand, 11211769 - 11211634
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttct-aatatggtaa 266  Q
    ||||| || ||||||| ||||||| ||| | |||||||||| | | ||| |||||||||||||||||||| |||||||||||||||| | || ||| ||     
T  11211769 gatggcctaacaatgtctttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttgggcccaaccacgatttataaaaatgctag 11211671  T
Q  267 tagagcat-ctccaagatccattgggtcacctgctat 302  Q
    || ||| | ||||||||||||||||| |||| |||||    
T  11211670 tacagcctcctccaagatccattgggccacccgctat 11211634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 349
Target Start/End: Complemental strand, 6001687 - 6001580
Alignment:
Q  242 ccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    ||||||||||||||||| ||||||  ||||| ||| ||| ||  ||| ||||| |||||||||||||||| |||||| | | ||||| |||||| |||||    
T  6001687 ccaaccacgatttctaagatggtatcagagcctcttcaaaatttattaggtcatctgctatcaggtttcccctatcgagtctcccaccatttatttccac 6001588  T
Q  342 gagccaag 349  Q
    || |||||    
T  6001587 gaaccaag 6001580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 6991751 - 6991838
Alignment:
Q  171 ggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||| ||||||||| ||| |||||||||||| |  |||| | ||||| || ||||||||||||||||||||| ||||||||    
T  6991751 ggtccgacaatttgtttataagtggcgacaatcctcacctcttaagccagttttatgaggttgtgttaggcccaaccacaatttctaa 6991838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 341
Target Start/End: Complemental strand, 30727415 - 30727272
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tccaagatccattgggtcacct 297  Q
    |||||||||| | | ||| |||||||||| ||||| ||||| ||| ||||  |||| ||| ||||||  ||||  |  ||||||||   ||||| |||||    
T  30727415 caatcctcacctcacaagccggttttgtgaggttgagttagtcccgaccagaatttttaagatggtatcagagtctaatccaagatttgttgggccacct 30727316  T
Q  298 gctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
     |||||||||||||||||| ||||||||||| ||||||||||||    
T  30727315 tctatcaggtttccgctattgggccacccaccatttatatccac 30727272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 32879706 - 32879615
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| |||||||||||||||||| ||| |  |||||||||| | | ||| |||||||| |||||||||||||||||||| |||| ||||||    
T  32879706 gatggcctgacaatgtgtttataagtggggggcaatcctcacctcacaagccggttttgcggggttgtgttaggcccaacgacgacttctaa 32879615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 36206145 - 36206062
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||| ||||||||| ||||| ||||| |||| | | ||| ||||||| ||||||||| |||||| ||||||||||||||||||    
T  36206145 acaatttgtttataagtggaggcaatcttcacctcacaagccggttttatggggttgtattaggctcaaccacgatttctaata 36206062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 43075394 - 43075311
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| |||||||||| ||| | |||||||||| | | |||| |||||||||||||||||||  || ||||||||||||||||    
T  43075394 tgacaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgttgagctcaaccacgatttctaa 43075311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 2404265 - 2404175
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| |||||||||||||||||| ||| | ||||||| ||   | |||||||||||   |||||||||||||||||||||| ||||||||    
T  2404265 gatggactgacaatgtgtttataagtgggggcaatcctaaccccacaagtcggtttttaagggttgtgttaggcccaaccacaatttctaa 2404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 3519818 - 3519733
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttct 256  Q
    ||||||| |||||||||||||||||| ||| |  |||||||||     ||| ||||||||||||| |||||||||| ||||||||||||||    
T  3519818 gtgatggcctgacaatgtgtttataagtgggggtaatcctcac-----aagccggttttgtggggctgtgttaggctcaaccacgatttct 3519733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 14541025 - 14540963
Alignment:
Q  186 ttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaacca 248  Q
    |||||| ||| | |||||| ||| | |||||||||||||||||||||||||||||||||||||    
T  14541025 ttataagtgggggcaatccacacctcataagtcggttttgtggggttgtgttaggcccaacca 14540963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 31257120 - 31257030
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||||||| ||||||||| ||| | ||||| |||| | | ||  | |||||||||||||||||||| | ||||||||||||||||||    
T  31257120 tggtctgacaatttgtttataagtgggggcaatcttcacctcacaaaccagttttgtggggttgtgttagactcaaccacgatttctaata 31257030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 23796275 - 23796178
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||||||||| ||| | ||||| |||| | | || | | ||||||||||||||||||||| |||||| ||||| ||| ||||||    
T  23796275 gatggtctaacaatgtgtttataagtgggggcaatcatcacctcacaaattgattttgtggggttgtgttaggctcaaccatgatttttaagatggta 23796178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 356
Target Start/End: Original strand, 32292619 - 32292700
Alignment:
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||| | || ||||||||| ||||||||||| |||||||||| ||||||| || ||||||||||  ||||| ||||||    
T  32292619 ctccaagacctatcgggtcaccttctatcaggttttcgctatcgggtcacccaccatatatatccacgcaccaagcccaata 32292700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 31485517 - 31485430
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||||| |||||||||||||||||| ||| | |||||||||| | | ||   ||||||||| |||||||||||| |||||||||||||    
T  31485517 gtgatggcctgacaatgtgtttataagtgggggcaatcctcacatcacaaactggttttgtgaggttgtgttagg-ccaaccacgattt 31485430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 7786294 - 7786255
Alignment:
Q  219 ggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  7786294 ggttttgtggggttgtgttaggcccaaccatgatttctaa 7786255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 44874431 - 44874348
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    |||||||||||||||||| ||| |  ||||||||| | | ||  || ||||||  |||||||||||||||||||||||||||||    
T  44874431 ctgacaatgtgtttataagtgggggaaatcctcacctcacaaaccgattttgtatggttgtgttaggcccaaccacgatttcta 44874348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 1793741 - 1793836
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||||||||||||  |||| | ||| | |||||||||| | | |||  |||||||||||||||||  |||||||||||||||||| || ||||||    
T  1793741 gatggtctgacaatgt--ttattagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgcaaggcccaaccacgatttcgaagatggta 1793836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 1793921 - 1794003
Alignment:
Q  176 gacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||| |||||  || |||||| | | ||| | |||||||| ||||||||| ||||||||||||||||||||    
T  1793921 gacaatgtgtttgtaagtggaggaaaacctcacctcacaagccagttttgtgcggttgtgttgggcccaaccacgatttctaa 1794003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 40746497 - 40746583
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| |  ||||| ||| | | ||| | |||||||| |||||||||||||||||||| |||||||||||    
T  40746497 ctgacaatttgtttataagtgggggaaatccacacctcacaagccagttttgtgaggttgtgttaggcccaaccatgatttctaata 40746583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 4268053 - 4268138
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgt-ggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| ||| | ||||| |||| | | ||| ||||||| | |||||||||||||||||||||| |||||||||    
T  4268053 ctgacaatttgtttataagtgggggcaatcatcacctcaaaagccggtttttttggggttgtgttaggcccaaccaagatttctaa 4268138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 20305701 - 20305660
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatg 262  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  20305701 ttttgtggggttgtgttaggcctaaccatgatttctaatatg 20305660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 23839168 - 23839079
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    |||||||| ||||| ||||||||| ||| |  ||||||||| | | ||| |||||||||| |||||||||||||||| | || |||||||    
T  23839168 gatggtctaacaatctgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgttaggcccatcgacaatttcta 23839079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 40746239 - 40746170
Alignment:
Q  287 ttgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| ||||||||||||||||| || |||||  |||||||| |||||| ||||||| ||||| ||||||    
T  40746239 ttgggccacctgctatcaggttttcgttatcgaaccacccaccatttatgtccacgaaccaagcccaata 40746170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 348
Target Start/End: Complemental strand, 5872044 - 5871866
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||||||||  |||||||| ||| ||| | |||||| ||||| | ||| || |||||| |||| |||| || |||||||||||||||||| ||| ||  |    
T  5872044 atggtctgaagatgtgtttttaagtgggg-caatccccacttcacaagccgattttgtagggtagtgt-agtcccaaccacgatttctaagatgatatca 5871947  T
Q  269 gagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||| | |   ||||||||||| ||||||||||||||  ||||||||||||| | ||| || |||||| || |||| ||||    
T  5871946 gagcctgcgttaagatccattgagtcacctgctatcatatttccgctatcggacgacctaccatttatgtcaacgaaccaa 5871866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 48420783 - 48420743
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  48420783 cggttttgtggggttgtgctaggcccaaccacgaattctaa 48420743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 2376492 - 2376441
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||| |||||||||| ||||| | ||||||||||| ||||||||||    
T  2376492 aagtcggtttagtggggttgtattaggtcaaaccacgatttttaatatggta 2376441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 8075863 - 8075938
Alignment:
Q  179 aatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||||||||||| ||| || |||| |||| | | ||||||||||| ||| ||||||| ||| |||||||||||||    
T  8075863 aatgtgtttataagtggggataatcttcacctcacaagtcggttttatggagttgtgtcaggtccaaccacgattt 8075938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 14742885 - 14742830
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||  ||||||||||||    
T  14742885 caatcctcattttacaagtcagttttgtggagttgtgttaggatcaaccacgattt 14742830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 22339633 - 22339543
Alignment:
Q  229 ggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcc---aagatccattgggtcacctgctatcaggtttccgctatcg 318  Q
    |||||||||||||||||| || |||||||||||||||  |||||  ||||   ||||||||||||  ||||||||| ||||||| | ||||||    
T  22339633 ggttgtgttaggcccaacgacaatttctaatatggtatcagagc--ctccgttaagatccattggaccacctgctaccaggttttctctatcg 22339543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 32474524 - 32474583
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| | | ||| |||||||||||| ||| ||||||||||||||| ||||||||    
T  32474524 caatcctcacctcacaagccggttttgtgggtttgcgttaggcccaaccacaatttctaa 32474583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 5871851 - 5871813
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  5871851 gttttgtagggttgtgttagtcccaaccacgatttctaa 5871813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 43089292 - 43089230
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgtt 237  Q
    |||||| |||||||||| ||| | |||||||||| | | |||| |||||||||||||||||||    
T  43089292 tgacaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgtt 43089230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 23796113 - 23796017
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||||||||| | |||||||| ||| | |||||||||| | | ||| || |||| ||||| |||||||||| |||||| ||||| ||| ||||||    
T  23796113 gatggtctgacaacgggtttataagtgg-ggcaatcctcacctcacaagccgattttatggggatgtgttaggctcaaccatgatttttaagatggta 23796017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 47849686 - 47849723
Alignment:
Q  305 ggtttccgctatcgggccacccacaatttatatccacg 342  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  47849686 ggtttccgttatcgggccacccaccatttatatccacg 47849723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 1793860 - 1793908
Alignment:
Q  287 ttgggtcacctgctatcaggtttccgctatcgggccacccacaatttat 335  Q
    ||||| |||||||||||||||||||| | | ||||||||||| ||||||    
T  1793860 ttgggccacctgctatcaggtttccgttgttgggccacccaccatttat 1793908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 4454769 - 4454809
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcac 208  Q
    |||||||||||||||||||||||| ||| | ||||||||||    
T  4454769 gatggtctgacaatgtgtttataagtgggggcaatcctcac 4454809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 22574882 - 22574918
Alignment:
Q  222 tttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| | ||||||||||||||||||||||||||||    
T  22574882 tttgtgagtttgtgttaggcccaaccacgatttctaa 22574918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 39164556 - 39164592
Alignment:
Q  288 tgggtcacctgctatcaggtttccgctatcgggccac 324  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  39164556 tgggtcacctgctatcaggtttcccctatctggccac 39164592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 169 - 356
Target Start/End: Original strand, 1910 - 2097
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||||||||||||||||||| ||| | |||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||||  |    
T  1910 atggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 2009  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||| | ||||||| |||||| ||||||| ||||| ||||||    
T  2010 gagcctctccaagatccattgggccacctgttatcaggtttccgctatcgagtcacccaccatttatgtccacgaaccaagcccaata 2097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 2145 - 2234
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | |||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||    
T  2145 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 2234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 113)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 169 - 356
Target Start/End: Complemental strand, 11232519 - 11232332
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||||||||||||||||||| ||| | |||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||||  |    
T  11232519 atggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 11232420  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||| | ||||||| |||||| ||||||| ||||| ||||||    
T  11232419 gagcctctccaagatccattgggccacctgttatcaggtttccgctatcgagtcacccaccatttatgtccacgaaccaagcccaata 11232332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 166 - 356
Target Start/End: Complemental strand, 39053022 - 39052832
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39053022 gtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaagatggta 39052923  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
     |||||| ||||||||||||||| || | ||||||||||||||||||||||| |||||||||| |||||| ||||||| ||||| ||||||    
T  39052922 ttagagcctctccaagatccatttggccccctgctatcaggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaata 39052832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 174 - 354
Target Start/End: Original strand, 41790658 - 41790837
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| ||| |||||||||||| | ||||| |||||||||||| |||||||||||||||||||||||||||| ||||||  |||||     
T  41790658 ctgacaatgtgtttataagtggggacaatcctcacctcataagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcagagcc 41790756  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaa 354  Q
    ||| |||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| |||| || ||||| ||||    
T  41790757 tcttcaagatccattgggccacctgctatcaggtttccgctatcgagccacccaccatttatgtccatgaaccaagcccaa 41790837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 175 - 356
Target Start/End: Original strand, 20301261 - 20301442
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||||||||||| ||| | ||||||| || | | ||| | |||||||| |||||||||||||||||||||||||||||| ||||||  ||||| |    
T  20301261 tgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcct 20301360  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    || |||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||| || |||| ||||| ||||||    
T  20301361 cttcaagatccattgggccacctgctatcaggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaata 20301442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 175 - 356
Target Start/End: Original strand, 21087893 - 21088074
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||||||||||| ||| | ||||||| || | | ||| | |||||||| |||||||||||||||||||||||||||||| ||||||  ||||| |    
T  21087893 tgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcct 21087992  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    || |||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||| || |||| ||||| ||||||    
T  21087993 cttcaagatccattgggccacctgctatcaggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaata 21088074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 329
Target Start/End: Complemental strand, 24532512 - 24532351
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    ||||| |||||||||||||||||| ||| | ||||| |||| | | ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||      
T  24532512 gatggcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatc 24532413  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccaca 329  Q
    |||||  || |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24532412 agagccccttcaagatccattgggccacctgctatcaggtttccgctatcgggccacccaca 24532351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 166 - 349
Target Start/End: Original strand, 31197606 - 31197788
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||||| |   |  ||| ||||| | | ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  31197606 gtgatggtctgacaatgtgtttataagtaagggtaattctcacctcaaaagtcggttttgtagggttgtgttaggcccaacca-gatttctaagatggta 31197704  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
      ||||| ||||| |||||||||||| ||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||    
T  31197705 tcagagcctctccgagatccattgggccacctgctatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaag 31197788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 172 - 356
Target Start/End: Original strand, 8084124 - 8084308
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagag 271  Q
    |||||||||||| ||||||| ||| | |||||||||| | | |||  ||||||| || |||||||||| |||||||||||||||||| ||||||  ||||    
T  8084124 gtctgacaatgtatttataagtgggggcaatcctcacctcacaagctggttttgcggagttgtgttagacccaaccacgatttctaagatggtatcagag 8084223  T
Q  272 catctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    | |||||||||||||||||| ||| ||||||||||||| |||||| ||  ||||||| |||||| ||||||| ||||| ||||||    
T  8084224 cctctccaagatccattgggccacatgctatcaggttttcgctattggatcacccaccatttatgtccacgaaccaagcccaata 8084308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 20094885 - 20094698
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||||||| ||||| ||||||||  ||| | |||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||| |||  |||||      
T  20094885 gatggtcttacaatatgtttatatgtgggggcaatcctcaccttacaagccggttttgtggggttgt-ttaggcccaaccacgatttataagttggtatc 20094787  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||  ||| |||||||||||||| ||||| ||||||||||| ||||||| |||||||||| |||||| ||||||| ||||| ||||||    
T  20094786 agagtttcttcaagatccattgggccacctcctatcaggttttcgctatcaggccacccaccatttatgtccacgaaccaagcccaata 20094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 169 - 335
Target Start/End: Complemental strand, 5932274 - 5932108
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||| ||||||||||||||| ||| | ||| |||||| | | ||| | |||||||||||||||||||||||||||||| |||| ||| ||||||  |    
T  5932274 atggtctaacaatgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaagatggtatca 5932175  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttat 335  Q
    |||| |||||||||||||||||  ||||| |||||| ||||||| ||||||||||||||| ||||||    
T  5932174 gagcctctccaagatccattggaccacctactatcacgtttccgttatcgggccacccaccatttat 5932108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 174 - 327
Target Start/End: Original strand, 34842677 - 34842830
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | ||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||     
T  34842677 ctgacaatttgtttataagtgggggcaatcctcacctcataggtcggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagagcc 34842776  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
    ||| || ||| | ||||||| |||| || |||||||||| ||||||||||||||    
T  34842777 tcttcacgattctttgggtcgcctgttaccaggtttccgttatcgggccaccca 34842830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 323
Target Start/End: Original strand, 4828068 - 4828216
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||| ||||||||| ||| |||||||||||| | | ||| ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |    
T  4828068 tgacaatttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaatatggtatcagagcct 4828167  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggcca 323  Q
    || || ||| | ||||| |||||| ||||||||||||| ||||||||||    
T  4828168 cttcacgattctttgggccacctgttatcaggtttccgttatcgggcca 4828216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 19256905 - 19256753
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | | |||  |||||||||||||||||||||||||||||||||||||||||||||||  |||||     
T  19256905 ctgacaatttgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcc 19256806  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| || ||| | ||||| |||||| ||||||||||||| |||||||||||||    
T  19256805 tcttcacgattctttgggccacctgttatcaggtttccgttatcgggccaccc 19256753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 11232284 - 11232162
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | |||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||||  |    
T  11232284 atggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 11232185  T
Q  269 gagcatctccaagatccattggg 291  Q
    |||| ||||||||||||||||||    
T  11232184 gagcctctccaagatccattggg 11232162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 167 - 356
Target Start/End: Complemental strand, 37868675 - 37868486
Alignment:
Q  167 tgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaa 266  Q
    |||||| ||||  |||||||||| ||||| | |||||||||| | | |||  ||||||||||  |||||||||||| ||||||||||| ||| ||||||     
T  37868675 tgatggcctgaacatgtgtttattaatgggggcaatcctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgatttttaagatggtat 37868576  T
Q  267 tagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
     | ||| |||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||| |||||| | ||||| ||||| ||||||    
T  37868575 catagcctctccaagatccattgggccacccgctatcaagtttccgctattgggccacccaccatttatgtacacgaaccaagcccaata 37868486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 8716107 - 8716283
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||||||| |||||||||||| || || || |||||||||| | ||||| || ||||||||||||||||||| |||||||| ||||||||||||||||      
T  8716107 gatggtctcacaatgtgtttaaaagtgaaggcaatcctcacctcataagccgattttgtggggttgtgttagacccaaccaagatttctaatatggtatc 8716206  T
Q  268 agag-catctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    |||| | ||   ||||||||||| ||||| |||||| ||||||||||||||||| |||| || |||||| |||||||    
T  8716207 agagccttcgttaagatccattgagtcacatgctattaggtttccgctatcgggtcaccgaccatttatgtccacga 8716283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 176 - 349
Target Start/End: Complemental strand, 15042969 - 15042794
Alignment:
Q  176 gacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta--atagagca 273  Q
    |||||||||||||||| ||| | ||||||| || |  |||  ||||||||||||||||||||||||| ||||||||||||||| ||| ||  ||||        
T  15042969 gacaatgtgtttataagtgggggcaatccttacctcgtaaaccggttttgtggggttgtgttaggcctaaccacgatttctaagatgttatcatagcctc 15042870  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||  ||||| ||||||| |||||    
T  15042869 tctccaagattcattgggccacctgctatcaggtttccgctatcaggccacccaccgtttatgtccacgaaccaag 15042794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 356
Target Start/End: Complemental strand, 3157653 - 3157462
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggt 264  Q
    ||||||| ||| |||||| ||||||| ||| |  |||||||||| | | ||| | |||||||||||||||||||||| ||||||| |||| ||| ||| |    
T  3157653 gtgatggcctggcaatgtatttataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggctcaaccaccatttataagatgat 3157554  T
Q  265 aatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |  ||||| ||||||| |||||||||  ||||||||||||||||| |||||||||| ||||||| |||||| ||||||| ||||| ||||||    
T  3157553 atcagagcctctccaaaatccattggaccacctgctatcaggttttcgctatcgggacacccaccatttatgtccacgaaccaagcccaata 3157462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 169 - 327
Target Start/End: Original strand, 12317040 - 12317198
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||||||||||||||||||| ||| | |||||||||| | |||||  | ||||||||| |||||||||||||||||||||||||||| ||||||  |    
T  12317040 atggtctgacaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatca 12317139  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
    |||  ||| || ||| | ||||| |||||| ||||||||||||| |||||| |||||||    
T  12317140 gagactcttcacgattctttgggccacctgttatcaggtttccgttatcggaccaccca 12317198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 362
Target Start/End: Original strand, 12688070 - 12688259
Alignment:
Q  173 tctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagc 272  Q
    ||||| ||||||||||||| ||  | |||||| ||| | | ||| ||||||||||| ||| |||||| | ||| |||||||||||| ||| || ||||||    
T  12688070 tctgataatgtgtttataagtgagggcaatccccacctcacaagccggttttgtggagttatgttagactcaaacacgatttctaagatgatattagagc 12688169  T
Q  273 atctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaatactgatg 362  Q
     ||| |||||||||||||| ||||||||||||||||||  |||| ||||||||||| |||||| ||||||| | ||| |||||| |||||    
T  12688170 ctcttcaagatccattgggccacctgctatcaggtttcttctattgggccacccaccatttatgtccacgaactaagcccaatagtgatg 12688259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 168 - 327
Target Start/End: Original strand, 37001219 - 37001381
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    ||||| || |||| |||||||||  ||| | |||||||||| | | ||| ||||||||||| |||||||||||||||||||||||||| || ||||||      
T  37001219 gatggcctcacaaagtgtttataggtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatc 37001318  T
Q  268 agagcatct---ccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
    ||||| |||    |||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  37001319 agagcctcttcatcaagatccattgggccacctgctgtcaggtttccgctatcgggccaccca 37001381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 221 - 356
Target Start/End: Original strand, 10615440 - 10615575
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    |||||||||||||||||||| | |||||  |||||||| ||||||  ||||| ||||||||||||||||   |||||| |||||||||||||||||||||    
T  10615440 ttttgtggggttgtgttaggtcaaaccataatttctaagatggtatcagagcctctccaagatccattgtaccacctgatatcaggtttccgctatcggg 10615539  T
Q  321 ccacccacaatttatatccacgagccaagtccaata 356  Q
     |||| || |||||| ||||||| ||||||||||||    
T  10615540 tcaccaactatttatctccacgaaccaagtccaata 10615575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 36917529 - 36917355
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||| ||||||| ||| |  ||||||||| | | ||||| ||||||||||||||||||| || ||||||| |||||||| ||||||  |    
T  36917529 atggcctgacaatgtatttataagtgggggtaatcctcacatcacaagtcagttttgtggggttgtgttaagcacaaccaccatttctaagatggtatca 36917430  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    |||| ||||||||||||||||  |||||  |||| ||||||||| |||||| ||| |||| |||||| |||||||    
T  36917429 gagcctctccaagatccattgaatcacccactattaggtttccgttatcggaccatccaccatttatgtccacga 36917355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 326
Target Start/End: Original strand, 16050028 - 16050180
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||| ||| ||||||||| || || |||||||||| | | ||||| |||||||||||||||||||| ||||||||||| |||||||||||||  |||||     
T  16050028 ctgataatttgtttataagtgaaggcaatcctcacctcacaagtcagttttgtggggttgtgttagacccaaccacgacttctaatatggtatcagagcc 16050127  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| || ||| | ||||| |||||| |||||| |||||| |||||||||||||    
T  16050128 tcttcacgattctttgggccacctgttatcagatttccgttatcgggccaccc 16050180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 362
Target Start/End: Complemental strand, 8466801 - 8466620
Alignment:
Q  182 gtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tccaa 280  Q
    |||||||||| ||| |||||||||||| | | |||  |||||| |||||||||||  | ||||||||| |||||||| ||||||  | ||| |  | |||    
T  8466801 gtgtttataagtggggacaatcctcacctcacaagctggttttatggggttgtgtacgacccaaccacaatttctaagatggtatcaaagcttggttcaa 8466702  T
Q  281 gatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaatactgatg 362  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||| |||||||| ||||  ||||| |||||| |||||    
T  8466701 gatccattgggccacctgctatcaggtttccgctatcaagccacccaccatttatatgcacgcaccaagcccaatagtgatg 8466620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 349
Target Start/End: Complemental strand, 18004320 - 18004239
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||    
T  18004320 agagcctctccaagatccattgggccacctgctatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaag 18004239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 35683019 - 35682926
Alignment:
Q  256 taatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||||||||  | |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||    
T  35683019 taatatggtatcatagcatctccaagatccattgggccacctgctattaggtttccgctatcgggccacccaccatttatgtccacgaaccaag 35682926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 356
Target Start/End: Complemental strand, 422543 - 422356
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||||||||| ||||||||| || |  ||||| |||  | ||||| || ||||||||||||||||| ||||||||||| |||||||| ||||||  |    
T  422543 atggtctgacaatatgtttataagtgtatgcaatcatcagctcataagccgattttgtggggttgtgtttggcccaaccacaatttctaagatggtatca 422444  T
Q  269 gagcatctc-caagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |    |||||||  ||||| |||||||||||||||||||||| ||||||||||||| |||| | ||||||| |||||| |||||    
T  422443 gagcctaaaacaagatcg-ttgggccacctgctatcaggtttccgctctcgggccacccaccatttttgtccacgaaccaagttcaata 422356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 5590459 - 5590336
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    ||||||||||||||||||||| || ||| | |||||||||||| | ||| |||||||||| ||||||||||||||||||||| |||||||| ||||||      
T  5590459 gatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaaaatggtatc 5590360  T
Q  268 agagcatctccaagatccattggg 291  Q
    ||| | | ||||||||||| ||||    
T  5590359 agatcctatccaagatccactggg 5590336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 37001458 - 37001547
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||||||| |||||||||| ||| |||||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  37001458 atggcctgacaaagtgtttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 37001547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 17469817 - 17469908
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  17469817 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaatatggta 17469908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 19256671 - 19256585
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  19256671 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 19256585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 183 - 356
Target Start/End: Complemental strand, 26208325 - 26208151
Alignment:
Q  183 tgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaag 281  Q
    ||||||||| ||| | |||||  ||| | ||||| | ||||| ||||||||||||||| ||| |||| |||||||| ||||||  ||||| | ||| |||    
T  26208325 tgtttataagtgggggcaatctccacatcataagccagttttatggggttgtgttaggtccatccacaatttctaagatggtatcagagccttctctaag 26208226  T
Q  282 atccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| ||||| ||||||||||||||||| | ||| |||||||||||| |||||||| || | |||||||| ||||    
T  26208225 atccgttgggccacctgctatcaggttttccctaacgggccacccaccatttatattcatgtgccaagtctaata 26208151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 309
Target Start/End: Complemental strand, 28213194 - 28213053
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||||||||||||||||||||||| ||  | |||||||||| | | ||| |  ||| | |||||||||||||||||||||||||||||||||||||||      
T  28213194 gatggtctgacaatgtgtttataagtgcgg-caatcctcacctcacaagccaatttggcggggttgtgttaggcccaaccacgatttctaatatggtatc 28213096  T
Q  268 agagcat-ctccaagatccattgggtcacctgctatcaggttt 309  Q
    ||| | | ||||||||||  ||||| |||||||||||||||||    
T  28213095 agatcctcctccaagatctgttgggccacctgctatcaggttt 28213053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 35682871 - 35682782
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | |||||||||| |   ||| |||||||||||||||||||||||||||||||||||||||||    
T  35682871 atggcctgacaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 35682782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 24075391 - 24075304
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||||| | ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24075391 ctgacactttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 24075304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 422308 - 422218
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||| || ||||| |||||||||| | | ||| | ||||||||||||| ||||||||| |||||||||||||||    
T  422308 gatggtctgacaatgtgtttaaaagtggaggcaatcctcacctcacaagccagttttgtggggttatgttaggccaaaccacgatttctaa 422218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 8929010 - 8929100
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| |||||||||||||||||| ||| | |||||| ||| | | ||| |||||||||||||||||||||||||||||||||| ||||||    
T  8929010 gatggcctgacaatgtgtttataactgggggcaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaa 8929100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 17477064 - 17477150
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  17477064 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaata 17477150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 356
Target Start/End: Complemental strand, 39052757 - 39052675
Alignment:
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||| ||| || ||||||||||||||||||||||||| |||||||||| |||||| ||||||| ||||| ||||||    
T  39052757 tctccaagatcaatttggccacctgctatcaggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaata 39052675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 18004186 - 18004097
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||| ||||||||| ||| | ||||||||||   |||||||||||||||| |||||||||||||||||||| |||||||||    
T  18004186 atggcctgacaatatgtttataagtgggggcaatcctcaccccataagtcggttttgtgaggttgtgttaggcccaaccaagatttctaa 18004097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 356
Target Start/End: Complemental strand, 42049766 - 42049589
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctcc 278  Q
    |||||||||||| ||| | ||||||||||   | ||| |||||||||| ||||||| |||||| ||||||||||||||| |||| |  ||| | | |||     
T  42049766 atgtgtttataagtgggggcaatcctcaccccacaagccggttttgtgaggttgtggtaggcctaaccacgatttctaagatggcatcagaacctcctca 42049667  T
Q  279 aagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||| ||||| | ||||||| |   ||||||||||  |||||||||| |||||| ||||||| ||||||||||||    
T  42049666 aagatccgttgggccgcctgctacctaatttccgctattaggccacccactatttatgtccacgaaccaagtccaata 42049589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 42846691 - 42846606
Alignment:
Q  174 ctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| |||||  |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  42846691 ctgacaatttgtttataagtggagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 42846606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 27204975 - 27205047
Alignment:
Q  186 ttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| ||| | |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27204975 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 27205073 - 27205145
Alignment:
Q  186 ttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| ||| | |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27205073 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27205145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 27205171 - 27205243
Alignment:
Q  186 ttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| ||| | |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27205171 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27205243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 38476081 - 38476210
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaagatccattgggtcacctgctat----caggtttccg 312  Q
    |||||||||||| || |||||||||||||||| |||||||| ||||||  ||||| | ||||||||||||||||| ||| | ||||    || |||||||    
T  38476081 cggttttgtgggattatgttaggcccaaccacaatttctaagatggtatcagagcctcctccaagatccattgggccacttactatcatgcatgtttccg 38476180  T
Q  313 ctatcgggccacccacaatttatatccacg 342  Q
    ||| || ||||||||| |||||||||||||    
T  38476181 ctaccgagccacccaccatttatatccacg 38476210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 4828293 - 4828375
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    ||||||| ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||| |||||||    
T  4828293 tgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 4828375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 5932039 - 5931954
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||| |||||||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||| |||||||||||||||| ||||    
T  5932039 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccaccattt 5931954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 349
Target Start/End: Original strand, 7669412 - 7669593
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||||| |||||| |||||||||| ||| | ||||| |||  ||| ||   |||||||||||||| ||||||||    | || |||| ||| ||||||      
T  7669412 gatggtttgacaacgtgtttataagtgggggcaatcatcatcttacaaactggttttgtggggttatgttaggcatggcgacaatttttaagatggtatc 7669511  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    | ||  ||| |||||||||||| | ||||||||||||||||||| ||||||| |||||||| |||||| ||||||| |||||    
T  7669512 aaagtctcttcaagatccattgagccacctgctatcaggtttccactatcggaccacccaccatttatgtccacgaaccaag 7669593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 10449994 - 10450083
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||  | |||||||||| | | ||| ||||||||| |||||||||||||| ||||||||||||||||    
T  10449994 atggcctgacaatgtgtttataagtgtgggcaatcctcacctcagaagccggttttgtagggttgtgttaggctcaaccacgatttctaa 10450083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 356
Target Start/End: Complemental strand, 10615018 - 10614842
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcca 279  Q
    ||||||||| |||||| |  |||| |||| | | ||| || |||||||||||||| |||||| |||||||||||| ||| ||| ||  | ||| ||||||    
T  10615018 atgtgtttacaaatgggggtaatcttcacctcacaagccgattttgtggggttgtattaggctcaaccacgatttataagatgatatcatagcctctcca 10614919  T
Q  280 agatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||  ||||||| |||| ||||  ||||||||  || |||| |||| | ||||||| ||||| ||||||    
T  10614918 agatccattggaccacctgcaatcaagtttttgctatcggaacatccaccatttgtgtccacgaaccaagcccaata 10614842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 10884063 - 10884154
Alignment:
Q  174 ctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||| ||| |  |||||||||| | | ||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  10884063 ctgacaatgtgtttataagtggggggcaatcctcacctcacaagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggta 10884154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 38447518 - 38447442
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggccca 244  Q
    ||||| |||||||||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||    
T  38447518 gatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggccca 38447442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 39743528 - 39743612
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| | | | |||||||||| | | ||| || ||||||||||||||||||||||||||||||||||||||    
T  39743528 ctgacaatttgtttataagttggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 39743612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 356
Target Start/End: Complemental strand, 3157210 - 3157147
Alignment:
Q  293 cacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||| ||||| ||||||    
T  3157210 cacctgctatcaggtttccgctatcgggacacccaccatttatgtccacgaaccaagcccaata 3157147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 289
Target Start/End: Original strand, 29005863 - 29005978
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| |||  ||||||||||||| ||||| ||  ||| || ||||||||||| |||||||||||||||||| | |||| |||||      
T  29005863 ctgacaatatgtttataagtgggaacaatcctcacttcataagccgaatttatgaggttgtgttagacccaaccacgatttctaagacggtattagagtc 29005962  T
Q  274 tctccaagatccattg 289  Q
    ||  ||||||||||||    
T  29005963 tcctcaagatccattg 29005978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 34653149 - 34653235
Alignment:
Q  173 tctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||||| ||||||||| || ||  |||||| || | | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  34653149 tctgacaatttgtttataagtg-aggtaatcctaacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 34653235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 39960216 - 39960275
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  39960216 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 39960275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 26800553 - 26800499
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagc 272  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  26800553 cggttttgtggggttgtgttaggcccaaccacaatttctattatggtattagagc 26800499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 31197838 - 31197915
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggccc 243  Q
    ||||||| |||||||||||||| ||| |||||||||||||||| | | ||||| |||| ||||| |||||||||||||    
T  31197838 gtgatggcctgacaatgtgtttgtaagtggagacaatcctcacctcacaagtcagtttggtgggattgtgttaggccc 31197915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 359
Target Start/End: Complemental strand, 5676080 - 5675956
Alignment:
Q  235 gttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaattta 334  Q
    |||||| ||||||||||||||||| ||| ||  ||||  ||| |||||| || | || ||||||||||||||||| || ||| ||| ||||||| |||||    
T  5676080 gttaggtccaaccacgatttctaagatgatatcagagtctcttcaagattcactaggccacctgctatcaggttttcgatattgggtcacccaccattta 5675981  T
Q  335 tatccacgagccaagtccaatactg 359  Q
    | || |||| ||||| |||||||||    
T  5675980 tgtctacgaaccaagcccaatactg 5675956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 12547094 - 12547181
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| | ||||||| ||| | ||||| |||| | | ||| ||||||||||||||||||||||||||||| |||||||||||    
T  12547094 tggtctgacaatttatttataagtgggg-caatcttcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaa 12547181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 356
Target Start/End: Complemental strand, 5675935 - 5675872
Alignment:
Q  293 cacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||| |||| |||||||||| ||||||| |||||| ||||||| ||||||||||||    
T  5675935 cacctgctatcaagttttcgctatcgggtcacccaccatttatgtccacgaaccaagtccaata 5675872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 318
Target Start/End: Original strand, 10615655 - 10615774
Alignment:
Q  200 aatcctcactttataagtcggttttgt-ggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctg 298  Q
    ||||||| | ||| ||||||||||||| |||||||| |||||| |||||||| ||||||| ||| || |||| | |||| ||||||||||    ||||||    
T  10615655 aatcctctccttacaagtcggttttgtgggggttgtattaggctcaaccacggtttctaagatgatattagaacctctctaagatccattaaaccacctg 10615754  T
Q  299 ctatcaggtttccgctatcg 318  Q
    |||||| |||| ||||||||    
T  10615755 ctatcacgttttcgctatcg 10615774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 38475754 - 38475837
Alignment:
Q  182 gtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||| ||| | |||||||||| | | ||| ||||||||| |||||||||||||||||||||| | |||||| ||||||    
T  38475754 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtagggttgtgttaggcccaaccacaaattctaagatggta 38475837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 356
Target Start/End: Original strand, 39960075 - 39960138
Alignment:
Q  293 cacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||||||||||||||| || |||||| |||||| ||||||| ||||| ||||||    
T  39960075 cacctgctatcaggtttccgctatcgagctacccaccatttatgtccacgaaccaagcccaata 39960138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 260
Target Start/End: Original strand, 4963397 - 4963439
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  4963397 cggttttgtggggttgtgttaggcccaaccacaatttctaata 4963439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 7267549 - 7267463
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    ||||||| ||||||||| ||| | ||||| |||| | | ||| ||||||||| |||||||||||| ||||||||| |||||||||||    
T  7267549 tgacaatttgtttataagtgggggcaatcatcacctcacaagccggttttgtagggttgtgttagacccaaccaccatttctaatat 7267463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 22638270 - 22638180
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| ||| ||| |||||||||| | | | ||||||||||   | ||| ||||||||||||||||||||| |||||||||||||||||||    
T  22638270 gatggcctgtcaaagtgtttataagtaggggcaatcctcaccacacaagccggttttgtggggttgtgttaagcccaaccacgatttctaa 22638180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 36907519 - 36907429
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||| | || ||| | |||| ||||| ||| ||| | |||| |||||||||||||||||||||||||  |||||||    
T  36907519 gatggtctgacaatgtgttcaaaagtgggggcaattctcacattacaagccagtttggtggggttgtgttaggcccaaccacactttctaa 36907429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 40014663 - 40014741
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||| | ||||| |||||| | |||||||||||||||| || ||| ||||| |||||||||||||||    
T  40014663 atgtgtttataagtgggggcaatcttcacttcacaagtcggttttgtgggcttctgtcaggccaaaccacgatttctaa 40014741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 3157412 - 3157328
Alignment:
Q  174 ctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| |  |||||||||| | | ||| | |||||||||||||||||||||||||||||| ||||||||    
T  3157412 ctgacaatgtgtttataagtggggggcaatcctcacctcacaag-ctgttttgtggggttgtgttaggcccaaccaccatttctaa 3157328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 15042760 - 15042671
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | ||||| |||| |   ||  || ||||||||||||||||||||| ||||||||||||||||    
T  15042760 atggcctgacaatgtgtttataagtgggggcaatcatcacctcgcaaaccgattttgtggggttgtgttaggctcaaccacgatttctaa 15042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 42584673 - 42584819
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| ||| | |||| ||||| |||  || || |||||||||    ||||||||| |||||| | |||||| | ||||  |||||     
T  42584673 ctgacaatgtgtttataagtgggggcaatactcaccttaccagccgattttgtggg----tgttaggcctaaccacaaattctaagacggtatcagagcc 42584768  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccac 324  Q
    | |||||||||| |||||  ||||||||||| ||||||  |||||||||||    
T  42584769 tatccaagatccgttgggctacctgctatcatgtttcctttatcgggccac 42584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 45122365 - 45122418
Alignment:
Q  195 gagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaacca 248  Q
    |||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||    
T  45122365 gagacaatcctcaccttacaagccggtttcgtggggttgtgttaggcccaacca 45122418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 10454449 - 10454509
Alignment:
Q  198 acaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||| | | ||| ||||||||| |||||||||||||| ||||||||||||||||    
T  10454449 acaatcctcacctcagaagccggttttgtagggttgtgttaggctcaaccacgatttctaa 10454509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 12688306 - 12688390
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| | ||||||| || | | ||| | |||||||||||||||| |||| ||||||| |||||||||    
T  12688306 ctgacaatgtgtttataagtgggggcaatccttacctcacaagccagttttgtggggttgtgataggtccaaccatgatttctaa 12688390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 24532327 - 24532287
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  24532327 cggttttgtggggttgtgttaggcccaaccacgatctctaa 24532287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 356
Target Start/End: Complemental strand, 31079602 - 31079478
Alignment:
Q  232 tgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaat 331  Q
    ||||||||||||||  | ||||||||| ||||||  | | | ||| |||||||||||||  ||| || |||||| ||||| |||||||||||||||| ||    
T  31079602 tgtgttaggcccaataaagatttctaagatggtatcaaaacctctacaagatccattggaccacatgttatcagatttccactatcgggccacccaccat 31079503  T
Q  332 ttatatccacgagccaagtccaata 356  Q
    |||| |  |||| ||||| ||||||    
T  31079502 ttatgtgaacgaaccaagcccaata 31079478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 31827353 - 31827433
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||||||||||||||||   || |||||| ||||  | |||||| |||||||||||||| ||||||||||||||| |||||    
T  31827353 ctgacaatgtgtttatatgcggtgacaattctcatctcataagttggttttgtggggttatgttaggcccaaccatgattt 31827433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 5675826 - 5675735
Alignment:
Q  167 tgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||||| | |||||||| ||||| | | |||  | |||||||| ||||||||||| | ||  |||||||||||    
T  5675826 tgatggtctgacaatgtgtttataagtagagacaattctcacctcacaagctgattttgtggagttgtgttaggtcaaattacgatttctaa 5675735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 5940046 - 5940157
Alignment:
Q  163 tgagtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatg 262  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||| | | |||   ||||||| ||||||||||   | ||||||  |||||||| |||    
T  5940046 tgagagatggtttgacaatgtgtttataaatggggacaatcctcacctcacaagcaagttttgtagggttgtgtttaactcaaccataatttctaaaatg 5940145  T
Q  263 gtaatagagcat 274  Q
    |||  |||||||    
T  5940146 gtatcagagcat 5940157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 35385871 - 35385812
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| | ||||| ||||||||||||||||||||| || ||||||| ||||||||    
T  35385871 caatcctcacctcataagccggttttgtggggttgtgttaagctcaaccaccatttctaa 35385812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 356
Target Start/End: Complemental strand, 5589932 - 5589878
Alignment:
Q  302 tcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||||  |||||||||||||| ||||||| ||||| ||||||    
T  5589932 tcaggtttccgctatcggatcacccacaatttatgtccacgaaccaagcccaata 5589878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 26208059 - 26208013
Alignment:
Q  212 ataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  26208059 ataagccggttttgtggggttatgttaggcccaaccacaatttctaa 26208013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 25325648 - 25325729
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||| |||   |||||||| | | | ||| | ||||||||| ||||| |||||||||||||||||||||||    
T  25325648 acaatgtgtttataagtgggtgcaatcctctcctcacaagccagttttgtggagttgttttaggcccaaccacgatttctaa 25325729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 7669635 - 7669695
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggg 229  Q
    ||||||||||||||||||||||| ||| | |||||||||| | | |||| |||||||||||    
T  7669635 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggg 7669695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 39984809 - 39984877
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgtta 238  Q
    |||||||||||| ||||||||| ||| | |||||||||| | | ||| | |||||||||||||||||||    
T  39984809 tggtctgacaatttgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgtta 39984877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 17476907 - 17476982
Alignment:
Q  251 atttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    |||||||||||||||  ||||| ||| || |||   ||||| |||||| ||||||||||||| |||||||||||||    
T  17476907 atttctaatatggtatcagagcctcttcacgattgtttgggccacctgttatcaggtttccgttatcgggccaccc 17476982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 18939373 - 18939298
Alignment:
Q  183 tgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||| ||| | |||||||||| | | |||  | ||||||| ||||||||||||||||||||| ||||||||    
T  18939373 tgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaaccaccatttctaa 18939298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 19472456 - 19472417
Alignment:
Q  287 ttgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  19472456 ttgggccacctgttatcaggtttccgctatcgggccaccc 19472417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 19543381 - 19543342
Alignment:
Q  287 ttgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  19543381 ttgggccacctgttatcaggtttccgctatcgggccaccc 19543342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 19589315 - 19589354
Alignment:
Q  287 ttgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  19589315 ttgggccacctgttatcaggtttccgctatcgggccaccc 19589354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 34843112 - 34843195
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatt 253  Q
    |||||| ||||| ||||||||| |||   |||||||||| | | ||| |||||||||||||||||||||| |  ||||||||||    
T  34843112 tggtctaacaatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggggttgtgttagactgaaccacgatt 34843195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 8084407 - 8084445
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  8084407 gttttgtgaggttgtgttaggtccaaccacgatttctaa 8084445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 15686119 - 15686041
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| |||  | ||| ||||| | | ||| |||||||||||| ||||||||| | ||||||||||||||||    
T  15686119 atgtgtttataagtgggaaaaattctcacctcacaagccggttttgtgggattgtgttagactcaaccacgatttctaa 15686041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 16050260 - 16050345
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| | ||||||| ||  |||||||||||| | | ||| |||||||||||||||||||||| ||||   |||||||||||||    
T  16050260 ctgacaatttatttataagtgaggacaatcctcacctca-aagccggttttgtggggttgtgttagacccaggtacgatttctaata 16050345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #99
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 16962287 - 16962221
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatc 284  Q
    |||||||||||| |||||||||| |||||||| |||| ||| || |||  |||| ||||||||||||    
T  16962287 cggttttgtgggattgtgttaggtccaaccacaatttttaagattgtatcagagtatctccaagatc 16962221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #100
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 20301501 - 20301590
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtgg------ggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||| ||| | ||||||||||   | ||| ||||| |||||      ||||||||||||||||||||||||||||||    
T  20301501 tgacaatgtgtttataagtgggggcaatcctcaccccacaagccggttgtgtggttttgaggttgtgttaggcccaaccacgatttctaa 20301590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #101
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 20515137 - 20515223
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||| |||||||||||||||||| | | | |||||||||| | | ||| ||||||||||||||| ||| || | ||||||| ||||    
T  20515137 gatggcctgacaatgtgtttataagtcggggcaatcctcacatcacaagccggttttgtggggttatgtcagcctcaaccacaattt 20515223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #102
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 21088133 - 21088222
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtgg------ggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||| ||| | ||||||||||   | ||| ||||| |||||      ||||||||||||||||||||||||||||||    
T  21088133 tgacaatgtgtttataagtgggggcaatcctcaccccacaagccggttgtgtggttttgaggttgtgttaggcccaaccacgatttctaa 21088222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #103
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 27439638 - 27439512
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    ||||| |||||||||||||||||| | | | |||||||| | | | |||  |||||||||| ||||||| |||| |||| |||| || ||| ||||||      
T  27439638 gatggcctgacaatgtgtttataagtagggtcaatcctcgcctcacaagctggttttgtggcgttgtgtcaggctcaactacgagttttaagatggtatc 27439539  T
Q  268 agagcatctccaagatccattgggtca 294  Q
    ||||  |||| ||||||| ||||||||    
T  27439538 agagtctctctaagatccgttgggtca 27439512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #104
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 326
Target Start/End: Original strand, 39743372 - 39743446
Alignment:
Q  252 tttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||||||||||||||  ||||| ||| || |||   ||||| |||||| ||||||||||||| |||||||||||||    
T  39743372 tttctaatatggtatcagagcctcttcacgattgtttgggccacctgttatcaggtttccgttatcgggccaccc 39743446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #105
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 44694748 - 44694710
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  44694748 gttttgtggggttgtgttaggcccaaccacaaattctaa 44694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #106
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 10615195 - 10615126
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattg 289  Q
    |||||||||||||| |||| |||||||||| |||||||| |||||   ||||| |||||| |||| ||||    
T  10615195 gttttgtggggttgcgttaagcccaaccacaatttctaagatggtgtcagagcctctccatgatctattg 10615126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 29907918 - 29907865
Alignment:
Q  287 ttgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatcca 340  Q
    ||||| ||||||||||||||||| || |||||| |||||||| |||||| ||||    
T  29907918 ttgggccacctgctatcaggttttcgttatcggtccacccaccatttatgtcca 29907865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 36917351 - 36917310
Alignment:
Q  165 agtgatggtctgacaatgtgtttataaatggagacaatcctc 206  Q
    |||||| |||||||||||||||||||| ||||| ||||||||    
T  36917351 agtgatagtctgacaatgtgtttataagtggaggcaatcctc 36917310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 37868020 - 37867971
Alignment:
Q  307 tttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||| ||||||||||| |||||| ||||||| ||||| ||||||    
T  37868020 tttccgctattgggccacccaccatttatgtccacgaaccaaggccaata 37867971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #110
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 29099831 - 29099791
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcac 208  Q
    |||||||||||||||||||||||| ||||| ||||| ||||    
T  29099831 gatggtctgacaatgtgtttataagtggaggcaatcttcac 29099791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #111
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 29907813 - 29907761
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggtttt 224  Q
    |||||||||||||||||||| ||| | |||||||||| | | |||||||||||    
T  29907813 gtctgacaatgtgtttataagtggggtcaatcctcacctcacaagtcggtttt 29907761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #112
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 38475871 - 38475915
Alignment:
Q  312 gctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||| |||||||||| |||||||||||||  ||||||||||||    
T  38475871 gctatcaggccacccaccatttatatccacgcaccaagtccaata 38475915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #113
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 45031421 - 45031373
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaacc 247  Q
    |||||||||| ||| ||| |||||||||  |||||||||||||||||||    
T  45031421 caatcctcaccttacaagccggttttgtaaggttgtgttaggcccaacc 45031373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 6e-56; HSPs: 94)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 174 - 356
Target Start/End: Original strand, 2029768 - 2029950
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| ||||| |||||||||| | | ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||     
T  2029768 ctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatggtatcagagcc 2029867  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| |||||||| |||||| ||||||| ||||| ||||||    
T  2029868 tctccaagatccattgggccacctgctattaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaata 2029950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 166 - 354
Target Start/End: Complemental strand, 40379537 - 40379349
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||| ||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40379537 gtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggta 40379438  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaa 354  Q
      ||||| | ||||||||||||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| ||||    
T  40379437 tcagagcctttccaagatccattaggccacctgctatcaggtttcctctatcgggccacccaccatttatatccacgaaccaagcccaa 40379349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 169 - 356
Target Start/End: Complemental strand, 14466500 - 14466313
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| |||   |||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||||  |    
T  14466500 atggcctgacaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 14466401  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  14466400 gagcctctccaagatccattgggccacttgttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaata 14466313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 169 - 356
Target Start/End: Complemental strand, 5711765 - 5711577
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | ||||| |||| ||| ||| |||||||||||||||||||||||||||||||| |||||||| || |||  |    
T  5711765 atggcctgacaatgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatagtatca 5711666  T
Q  269 gagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| | ||||||||||| ||||  |||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||    
T  5711665 gagcctcctccaagatccgttggaccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaata 5711577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 218 - 349
Target Start/End: Original strand, 16419310 - 16419441
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  16419310 cggttttgtggggttgtattaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgctatc 16419409  T
Q  318 gggccacccacaatttatatccacgagccaag 349  Q
    | ||||||||| |||||| ||||||| |||||    
T  16419410 gagccacccaccatttatgtccacgaaccaag 16419441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 169 - 356
Target Start/End: Complemental strand, 15124873 - 15124686
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||| ||||| ||||||||||| ||  | ||||| |||||| | || ||||||||||||||||||||||| |||||||||||||||||| ||||||  |    
T  15124873 atggtatgacagtgtgtttataagtgagggcaatcttcacttcacaattcggttttgtggggttgtgttagacccaaccacgatttctaagatggtatca 15124774  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||  |||||||||||||||||  ||||||||||||||||| || ||||||| || |||| |||||| ||||||| ||||||||||||    
T  15124773 gagtctctccaagatccattggaccacctgctatcaggttttcgttatcgggtcatccaccatttatgtccacgaaccaagtccaata 15124686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 166 - 349
Target Start/End: Original strand, 17719391 - 17719574
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||||||||||||||| ||| | |||||||||| | | ||| ||||||||| |||||||||| ||||||||||| |||||||| ||||||    
T  17719391 gtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaagatggta 17719490  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
      | ||  ||||||||||||||| || ||||||||||||||||||| ||||| ||||| |||| |||||| ||||||| |||||    
T  17719491 tcaaagtctctccaagatccatttggccacctgctatcaggtttcccctatccggccatccaccatttatgtccacgaaccaag 17719574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 356
Target Start/End: Complemental strand, 93394 - 93257
Alignment:
Q  219 ggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcg 318  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||  ||||| |||||||||||||||||| ||||||||||||| |||||| |||||    
T  93394 ggttttgtggggttgtgttaggcccaaccacgatttttaagatggtatcagagcctctccaagatccattgggccacctgctatcagctttccgttatcg 93295  T
Q  319 ggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||| | |||| |||||||  |||| ||||||    
T  93294 ggccacccaccaattatgtccacgaatcaagcccaata 93257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 93667 - 93558
Alignment:
Q  219 ggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcg 318  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  ||| | | |||||||||||||||||||||| |||||||||||||| |||||    
T  93667 ggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagaacctttccaagatccattgggtcacctactatcaggtttccgttatcg 93568  T
Q  319 ggccacccac 328  Q
    ||||||||||    
T  93567 ggccacccac 93558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 170 - 326
Target Start/End: Original strand, 2324235 - 2324391
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatag 269  Q
    |||||||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||    
T  2324235 tggtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcag 2324334  T
Q  270 agcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| ||| || |||   ||||| |||||| ||||||||||||| |||||||||||||    
T  2324335 agcctcttcacgattgtttgggccacctgttatcaggtttccgttatcgggccaccc 2324391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 342
Target Start/End: Original strand, 10523012 - 10523185
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||| ||||||||||||||||||||||| ||||||| |||| |   ||| |  ||||||||| |||||||||||||||||||||||||||| |||||| |    
T  10523012 gatgatctgacaatgtgtttataaatggtgacaatcttcacctcgcaagccatttttgtgggattgtgttaggcccaaccacgatttctaaaatggtatt 10523111  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacg 342  Q
    ||  |  ||||||||||  |||||||||||||||||| ||||||| ||||| ||||||||| |||||| ||||||    
T  10523112 agc-ctcctccaagatctgttgggtcacctgctatcaagtttccgttatcgagccacccaccatttatgtccacg 10523185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 231 - 356
Target Start/End: Complemental strand, 40149264 - 40149139
Alignment:
Q  231 ttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaa 330  Q
    ||||||||||||||||||| |||||||| ||||||  ||||| ||| |||||||||||||||||||||||||||| |||| |||||||| |||||||| |    
T  40149264 ttgtgttaggcccaaccacaatttctaagatggtatcagagcctcttcaagatccattgggtcacctgctatcagatttcagctatcggaccacccacta 40149165  T
Q  331 tttatatccacgagccaagtccaata 356  Q
    ||||| ||||||| ||||| ||||||    
T  40149164 tttatgtccacgaaccaagcccaata 40149139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 170 - 326
Target Start/End: Original strand, 5509074 - 5509230
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatag 269  Q
    |||||||||||| ||||||||| ||| |  ||||||||| | | |||  |||||||||||||||||||||||||||||| ||||||||||||||||  ||    
T  5509074 tggtctgacaatttgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcag 5509173  T
Q  270 agcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| ||| || ||| | ||||| |||||| ||||||||||||| |||||||||||||    
T  5509174 agcctcttcacgattctttgggccacctgttatcaggtttccgttatcgggccaccc 5509230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 169 - 362
Target Start/End: Complemental strand, 17525428 - 17525231
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgat------ttctaatatg 262  Q
    ||||||||||||||||||||||| ||| | |||||||||| | | ||| |||||||||||| |||||| ||||||||||||||       |||||| |||    
T  17525428 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgt-aggcccaaccacgagaatgaattctaagatg 17525330  T
Q  263 gtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaatactgatg 362  Q
     ||  ||||| ||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||||| ||||| |||||| |||||    
T  17525329 atataagagcctcttcaa-atccattgggccacctgctatcaggtatccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgatg 17525231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 177 - 335
Target Start/End: Complemental strand, 36352241 - 36352083
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatct 276  Q
    ||||||||||||||| ||| | ||||| |||| | | ||| |||||||||||||||||||||||  ||||||| |||| ||| |||||| |||||  |||    
T  36352241 acaatgtgtttataagtgggggcaatcatcacctcaaaagccggttttgtggggttgtgttaggttcaaccacaatttttaagatggtattagagtctct 36352142  T
Q  277 ccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttat 335  Q
     |||||||||| ||| |||||| ||||||||||||| ||||||||||||||| ||||||    
T  36352141 tcaagatccatcgggccacctgttatcaggtttccgttatcgggccacccaccatttat 36352083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 179 - 362
Target Start/End: Complemental strand, 33606369 - 33606186
Alignment:
Q  179 aatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcc 278  Q
    ||||||||||||| ||| |  ||||||||| | | ||| | ||||||||| ||| |||||||| |||||||||||||||| ||| ||  | ||  ||| |    
T  33606369 aatgtgtttataagtgggggtaatcctcacctcacaagccagttttgtggcgttatgttaggcacaaccacgatttctaagatgatatcaaagtctcttc 33606270  T
Q  279 aagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaatactgatg 362  Q
    |||||| |||||||||| ||||||||||||||||||||| |||||||||| |||||| ||||||| ||||| | |||| |||||    
T  33606269 aagatctattgggtcacttgctatcaggtttccgctatcaggccacccaccatttatgtccacgaaccaagcctaatagtgatg 33606186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 356
Target Start/End: Original strand, 16533357 - 16533493
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgg 319  Q
    ||||| || ||||||||||  |||||| |||| |||||| ||||||  ||||| ||| ||||||||||||||  |||||||||||||||| |||||||||    
T  16533357 gttttatgaggttgtgttacacccaactacgacttctaaaatggtatcagagcctcttcaagatccattgggctacctgctatcaggttttcgctatcgg 16533456  T
Q  320 gccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||| |||||| ||||||| ||||| ||||||    
T  16533457 gccacccaccatttatgtccacgaaccaaggccaata 16533493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 13250336 - 13250173
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcca 279  Q
    ||||||||||||||| ||||||||||||| | ||  |  ||||||||| || ||||||||| ||||  ||||||||||| ||| || |||||| | ||||    
T  13250336 atgtgtttataaatgcagacaatcctcacatcatgtgctggttttgtgaggatgtgttaggtccaaatacgatttctaagatgatattagagcttttcca 13250237  T
Q  280 agatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    ||||||||||||||||||  ||| ||||||| ||||| ||| ||||||| |||||| |||||||    
T  13250236 agatccattgggtcaccttttataaggtttctgctattggggcacccaccatttatgtccacga 13250173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 218 - 340
Target Start/End: Complemental strand, 21383711 - 21383588
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tccaagatccattgggtcacctgctatcaggtttccgctat 316  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||  ||||| || |||||||||  ||||| |||||||||||| ||||| |||||    
T  21383711 cggttttgtgggattgagttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatctgttgggccacctgctatcaagtttctgctat 21383612  T
Q  317 cgggccacccacaatttatatcca 340  Q
     ||| |||||||||||||||||||    
T  21383611 tgggtcacccacaatttatatcca 21383588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 166 - 349
Target Start/End: Original strand, 24395855 - 24396037
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| || ||||||||||||| | ||| | |||||||||| | | || ||| |||||||||||||||||||||| ||||||||||||||| | ||||    
T  24395855 gtgatggcctaacaatgtgtttatgagtgggg-caatcctcacctcacaaatcgattttgtggggttgtgttaggccaaaccacgatttctaagagggta 24395953  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
      ||||| ||| |||||||||||||  |||||||| ||| |||| | ||||||| |||||||| |||||| |||| || |||||    
T  24395954 tcagagcctcttcaagatccattggaccacctgctctcatgttttcactatcggaccacccaccatttatgtccatgaaccaag 24396037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 16419496 - 16419585
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  16419496 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 16419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 5711529 - 5711440
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  5711529 atggcctgacaatgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 5711440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 2030003 - 2030087
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||||| |||||||||| | | ||| ||||||||||||||||| |||||||||||||||||||||||    
T  2030003 ctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaa 2030087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 334
Target Start/End: Original strand, 13210550 - 13210686
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tccaagatccattgggtcacct 297  Q
    |||||||||| | | | |||||||||||||||| ||||||||||||||||| | |||||| ||||||  ||||  || |||||||||||||||| ||| |    
T  13210550 caatcctcacctcacaggtcggttttgtggggtcgtgttaggcccaaccacaaattctaagatggtatcagagactcctccaagatccattgggccacat 13210649  T
Q  298 gctatcaggtttccgctatcgggccacccacaattta 334  Q
    |||||||| ||||| ||||||||| |||||| |||||    
T  13210650 gctatcagatttcctctatcgggcaacccaccattta 13210686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 40379302 - 40379210
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||| ||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  40379302 gtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 40379210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 19191695 - 19191608
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||||| | ||||||||| ||| |||||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19191695 ctgacagtttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 19191608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 356
Target Start/End: Complemental strand, 37812493 - 37812406
Alignment:
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||  ||||| ||||||| ||||| ||||||    
T  37812493 gagcctctccaagatccattgggccacctgctatcaggtttctgctatcgggccacccactgtttatgtccacgaaccaagcccaata 37812406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 326
Target Start/End: Complemental strand, 28407875 - 28407725
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-c 275  Q
    ||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||| |      
T  28407875 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcctgg 28407776  T
Q  276 tccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    | || ||| | |||||||||||| | |||| |||||| |||||||||||||    
T  28407775 ttcacgattctttgggtcacctgttgtcagatttccgttatcgggccaccc 28407725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 348
Target Start/End: Original strand, 32356386 - 32356556
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||||||||||| ||| | ||||||||||   | ||| | ||||||||| ||||||||||||||||| |||| ||||||  |||||  ||||| |    
T  32356386 tgacaatgtgtttataagtgggggcaatcctcaccc-acaagccagttttgtggagttgtgttaggcccaactacgaattctaagttggtatcagagcct 32356484  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    || ||| || ||||||| |||||||  |||||||||||||||||||| ||| || |||||| ||||||| ||||    
T  32356485 cttcaatattcattgggccacctgc--tcaggtttccgctatcgggctacctaccatttatgtccacgaaccaa 32356556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 175 - 341
Target Start/End: Original strand, 38629841 - 38630008
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||| ||||||| | | |||||||||||  | | |||||||||||||||  |||||||| |  ||| |||||||| ||| ||||||  ||||| |    
T  38629841 tgacaatgtatttataagttgggacaatcctcatctcacaagtcggttttgtggaattgtgttatgttcaatcacgatttttaagatggtatcagagcct 38629940  T
Q  275 c-tccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    | ||||||||||  |||||||||| |||| ||||||||||||||||  ||||| | ||||||||||||    
T  38629941 cctccaagatccgatgggtcaccttctattaggtttccgctatcggatcacccgccatttatatccac 38630008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 12343841 - 12343751
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| ||||||||| |||||| ||| | |||||||||| | ||||||| |||||||||||||||||||| |||||||||| |||||||    
T  12343841 gatggtcagacaatgtgcttataagtgggggcaatcctcacatcataagtcagttttgtggggttgtgttagacccaaccacggtttctaa 12343751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 37840336 - 37840434
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagc 272  Q
    |||||||||||||||||| ||||| ||||| |||| | | ||| |||||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||    
T  37840336 ctgacaatgtgtttataagtggaggcaatcatcacctcacaagccggttttgtggggttgtgttgggcccaaccacaatttttaagatggtattagagc 37840434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 310
Target Start/End: Original strand, 14927101 - 14927238
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| ||| | |||||||||| | ||||||| | |||||| ||||||||||||| |||||||||||||||| ||   |  |||||     
T  14927101 ctgacaatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaagataacatcagagcc 14927200  T
Q  274 t-ctccaagatccattgggtcacctgctatcaggtttc 310  Q
    | || || ||||| ||||| ||||||||||||||||||    
T  14927201 tccttcatgatccgttgggacacctgctatcaggtttc 14927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 21591776 - 21591865
Alignment:
Q  170 tggtctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||||||||| ||| |  ||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||||    
T  21591776 tggtctgacaatttgtttataagtggggggcaatcttcacctcataagtcggttttatggggttgtgttaggcccaaccacgatttctaa 21591865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 29718328 - 29718445
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||| ||||||||| ||  | |||||||||| | | ||| ||||||||||||||||||||||||| |||||||||||||||  |||||  ||||| |    
T  29718328 tgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagttggtatcagagcct 29718427  T
Q  275 ctccaagatccattgggt 292  Q
    ||| || |||||||||||    
T  29718428 ctctaaaatccattgggt 29718445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 268 - 349
Target Start/End: Original strand, 34893518 - 34893599
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||| |||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||| |||||| ||||||| |||||    
T  34893518 agagcctctccaagatccattgggccacctactatcaggttttcgctatcggaccacccaccatttatgtccacgaaccaag 34893599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 42639704 - 42639615
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||||||| ||||||| |||| | | |||  ||||||||||||||||||||| ||||||||| || |||||    
T  42639704 atggtctgacaatgtgtttataaatggggacaatcgtcacctcacaagctggttttgtggggttgtgttagacccaaccaccatctctaa 42639615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 18607235 - 18607147
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||| |||||||| |||||| |||||| || |||| ||||| ||||||    
T  18607235 agagcctctccaagatccattgggccacatgctatcaggtttccgttatcgggcaacccaccatttatgtctacgaaccaagcccaata 18607147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 17854777 - 17854690
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||||||| ||||||||| ||| | ||||| |||  | | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  17854777 ctgacaatctgtttataagtgggggcaatcatcatctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatat 17854690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 27897690 - 27897600
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||| | |||| ||||| | | |||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  27897690 ctgacaatttgtttataagtgggg-caattctcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggta 27897600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 2324473 - 2324559
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  2324473 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttccaata 2324559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 5594233 - 5594323
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| |||||||| |||||||||||  |||| ||||| ||||||| ||||||| ||| ||||||||| || ||||||||||||||||    
T  5594233 gatggtctaacaatgtgcttataaatggaagcaattctcaccttataagccggttttatggagttgtgttaagctcaaccacgatttctaa 5594323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 19571053 - 19570975
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||| | |||||||||| | |||||||| ||||||||  ||||||||||||||||||||||||||||    
T  19571053 atgtgtttataagtgggggcaatcctcacctcataagtcgattttgtggaattgtgttaggcccaaccacgatttctaa 19570975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 25082628 - 25082538
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||| | | | ||||| |||| | | ||| | ||||||||||||||||||||| |||||||||||||||||    
T  25082628 gatggtctgacaatgtgtttataagtaggggcaatcatcacctcacaagccagttttgtggggttgtgttaggtccaaccacgatttctaa 25082538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 36316136 - 36316050
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| | |||||||||| ||| ||| | ||||||||||||| ||||||| |||||||||||||||||||    
T  36316136 ctgacaatttgtttataagtgggggcaatcctcacattacaagccagttttgtggggttatgttaggtccaaccacgatttctaata 36316050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 37770032 - 37769942
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||| ||||||| ||||||||| ||| | ||||| |||| | ||||| |||||||||||||||||||||| |||||||||||||| |||||    
T  37770032 tggtttgacaatttgtttataagtgggggcaatcttcacctcataagccggttttgtggggttgtgttagacccaaccacgatttttaata 37769942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 15124638 - 15124553
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||||||||||| ||||||||| ||| | |||||| ||| | ||||| || ||||||||||||||||||| ||||||||||||||    
T  15124638 atggtctgacaatatgtttataagtgggggcaatccccacctcataagccgattttgtggggttgtgttagacccaaccacgattt 15124553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 10570988 - 10571060
Alignment:
Q  193 tggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||| ||||| |||| ||| ||| |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  10570988 tggaggcaatcttcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaagatggta 10571060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 17855014 - 17854926
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatg 262  Q
    |||||||| ||||||||| ||  | |||||||||| | | ||| |||||||||||||||||| ||| ||||||||||||||||||||||    
T  17855014 ctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgctagacccaaccacgatttctaatatg 17854926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 31700995 - 31700940
Alignment:
Q  236 ttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattggg 291  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||    
T  31700995 ttaggcccaaccacgatttctaagatggtattagagcctctccaagatccattggg 31700940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 356
Target Start/End: Complemental strand, 44404147 - 44404064
Alignment:
Q  274 tctccaagatccattgggtcacctgctatcaggtttccg-ctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||| ||||||| |||||| |||| || ||||| ||||||    
T  44404147 tctccaagatccattggaccacctgctatcaggtttccgcctatcgggtcacccactatttatgtccatgaaccaagcccaata 44404064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 313
Target Start/End: Original strand, 5594066 - 5594166
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggt--cacctgctatcaggtttcc 311  Q
    |||||||||||| ||| ||||||||||| ||| |||||||| ||| || |||  ||||| ||| |||||||||||||||  |||||||||||||||||||    
T  5594066 aagtcggttttgcgggattgtgttaggctcaatcacgattt-taagatagtatcagagcctcttcaagatccattgggtcacacctgctatcaggtttcc 5594164  T
Q  312 gc 313  Q
    ||    
T  5594165 gc 5594166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 32884106 - 32884184
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgat 252  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||| |||||    
T  32884106 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgat 32884184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 16533538 - 16533611
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttag 239  Q
    ||||||| |||||||||||||||||| ||| | |||||||||||| | ||| |||||||||| |||||||||||    
T  16533538 gtgatggcctgacaatgtgtttataagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttag 16533611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 27036462 - 27036409
Alignment:
Q  212 ataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  27036462 ataagccggttttgtagggttgtgttaggcccaaccatgatttctaatatggta 27036409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 293 - 362
Target Start/End: Complemental strand, 31001949 - 31001880
Alignment:
Q  293 cacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaatactgatg 362  Q
    |||||||||||||||||||||||||  |||||| || |||||||||||||| ||||| |||||| |||||    
T  31001949 cacctgctatcaggtttccgctatcatgccacctaccatttatatccacgaaccaagcccaatagtgatg 31001880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 40149081 - 40149004
Alignment:
Q  181 tgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||| ||| |||||||||||| | | ||| || |||||||||||||||||||| ||||||| |||||||||    
T  40149081 tgtgtttataagtggggacaatcctcacctcacaagccgattttgtggggttgtgttaggtccaaccatgatttctaa 40149004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 42895271 - 42895408
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccatt-gggtcacct 297  Q
    |||||||||| | | |||||| |||| ||||||| |||| |||  ||  ||||||||||  ||||||  ||||| |||| |||||||||| ||| |||||    
T  42895271 caatcctcacctcacaagtcgattttatggggttatgtttggcataattacgatttctatgatggtatcagagcctctctaagatccattagggccacct 42895370  T
Q  298 gctatcaggtttccgctatcgggccacccacaatttat 335  Q
    | ||||| |||||||||||||||| |||||| ||||||    
T  42895371 gatatcaagtttccgctatcgggcgacccaccatttat 42895408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 11020549 - 11020641
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||||||||||||| ||||| |||||||||| | | ||| || ||| ||||| |||||||||| |||| | ||||||||||    
T  11020549 gtgatggtctgaaaatgtgtttataagtggaggcaatcctcacctcacaagccgatttagtgggattgtgttaggtccaatcgcgatttctaa 11020641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 17719609 - 17719649
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17719609 cggttttgtggggttgtgttaggcccaaccacgatttctaa 17719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 5509314 - 5509400
Alignment:
Q  176 gacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatg 262  Q
    |||||| ||||||||| ||| | ||||||||||   | ||| |||||||||||||| |||||||| ||||||||||||| |||||||    
T  5509314 gacaatttgtttataagtgggggcaatcctcaccccacaagccggttttgtggggtagtgttaggtccaaccacgatttttaatatg 5509400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 317
Target Start/End: Complemental strand, 33381230 - 33381132
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagag-catctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||| ||||| |  || |||||| |||| || ||| ||||| |||||||| ||||||    
T  33381230 gttttgtgaggttgtgttagtcccaaccacgatttctaagatggtattagagtctccttcaagattcattaggccacatgctaacaggtttctgctatc 33381132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 5851767 - 5851682
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtgg-ggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| ||||||| ||| |||||||||||| | | ||| ||||||||||| |||||||||||| |||||||  ||||||||    
T  5851767 ctgacaatgtatttataagtggggacaatcctcacctcacaagccggttttgtggaggttgtgttaggtccaaccatcatttctaa 5851682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 7209072 - 7208999
Alignment:
Q  212 ataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatcc 285  Q
    |||||||||||||||| |||||||||||  ||| | ||||||||||| |||||| |||||| ||||||| ||||    
T  7209072 ataagtcggttttgtgaggttgtgttagatccatctacgatttctaaaatggtattagagcctctccaaaatcc 7208999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 342
Target Start/End: Complemental strand, 21383491 - 21383442
Alignment:
Q  293 cacctgctatcaggtttccgctatcgggccacccacaatttatatccacg 342  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  21383491 cacctgctatcaggtttccgctattgggccacccattatttatatccacg 21383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 17525184 - 17525100
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||  | |||||||||   | ||| |||||||||||  |||||| |||||||||||| ||||||||    
T  17525184 ctgacaatgtgtttataaatgggaagaatcctcaccgcacaagccggttttgtggaattgtgtcaggcccaaccacaatttctaa 17525100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 30701170 - 30701126
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  30701170 aagtcggttttgtggggttgtgttaagcccaaccacaatttctaa 30701126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 31700786 - 31700746
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  31700786 cggttttgtgggtttgtgttaggcccaaccacgatttctaa 31700746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 36316289 - 36316209
Alignment:
Q  255 ctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttat 335  Q
    |||||||||||  ||||| ||| || ||| | ||||| |||||| ||||||||||||| ||||||||||||||| ||||||    
T  36316289 ctaatatggtatcagagcctcttcacgattctttgggccacctgttatcaggtttccgttatcgggccacccaccatttat 36316209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 31222531 - 31222606
Alignment:
Q  185 tttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||| ||||| ||||||||||   ||||  || |||||| ||||||||||||| |||||||||||||||||||    
T  31222531 tttataagtggaggcaatcctcaccccataaaccgattttgtagggttgtgttaggaccaaccacgatttctaata 31222606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 8424883 - 8424973
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||||||| | ||||||| ||| | ||||| |||| | | ||  | ||||||||||||||||||| || ||||||||||||||||||    
T  8424883 tggtctgacaatttatttataagtgggggcaatcatcacctcacaaaccagttttgtggggttgtgttaagctcaaccacgatttctaata 8424973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 9927904 - 9927994
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||| ||| |  ||||||||| | | |||  | |||| ||||||||||||| | |||||||||| ||||||    
T  9927904 gatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagctgattttttggggttgtgttacgtccaaccacgaattctaa 9927994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 13486380 - 13486418
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaat 259  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  13486380 ttttgtggggttgtgttaggcctaaccacgatttctaat 13486418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 18208993 - 18209071
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||   ||||| |||| | |||||||||||| ||| |||||||||| || |||||| |||||||||    
T  18208993 atgtgtttataaatgggagcaatcatcacctcataagtcggtttcgtgaggttgtgttaagctcaaccatgatttctaa 18209071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 30701256 - 30701166
Alignment:
Q  261 tggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtc 351  Q
    ||||| |||||  ||| |||||||||||||| ||||| |||||||||||   ||||||||||| |||| |||||| ||||| | |||||||    
T  30701256 tggtattagagtctcttcaagatccattgggccacctactatcaggttttttctatcgggccatccaccatttatgtccacaaaccaagtc 30701166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 349
Target Start/End: Original strand, 15460979 - 15461148
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcca 279  Q
    |||||||||||  ||||| ||||| |||| | | ||| | |||||||||||||||||||| | ||||||  |||| ||| || ||   ||| | ||||||    
T  15460979 atgtgtttataggtggagccaatcatcacctcacaagacagttttgtggggttgtgttagactcaaccataatttttaagatagtttcagaacctctcca 15461078  T
Q  280 agatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    || || ||| | ||| |||||||||| ||| |||||||||| ||| ||  |||||| ||||||| |||||    
T  15461079 aggtcaattagatcaactgctatcagattttcgctatcgggtcacacatcatttatgtccacgaaccaag 15461148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 21383322 - 21383285
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  21383322 ttttgtggggttgtgttaggcccaaccacaatttctaa 21383285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 36351963 - 36351926
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| |||||||||||||||||||||||||    
T  36351963 ttttgtggggttatgttaggcccaaccacgatttctaa 36351926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 2375137 - 2375085
Alignment:
Q  285 cattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatat 337  Q
    ||||||||||||||||||||| ||| || |||||| |||||||| ||||||||    
T  2375137 cattgggtcacctgctatcagattttcgttatcggaccacccaccatttatat 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 19110343 - 19110391
Alignment:
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggcca 323  Q
    ||||||||||| |||||||||||||||| ||||||  ||||||||||||    
T  19110343 ctccaagatccgttgggtcacctgctattaggtttttgctatcgggcca 19110391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 11099586 - 11099519
Alignment:
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacg 342  Q
    ||||| ||| ||||||  || |||||||||| |||||||||||| ||||||||| |||||||| ||||    
T  11099586 ctccatgattcattggaccatctgctatcagatttccgctatcgagccacccaccatttatattcacg 11099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 15464762 - 15464845
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacga 251  Q
    |||||||||||||||||| | ||| ||| | |||||||||| | | ||  | ||||||||||||||||||||||  ||||||||    
T  15464762 gatggtctgacaatgtgtatttaagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaggcttaaccacga 15464845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 30006658 - 30006580
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||| || |||| ||||   | ||| |||||||||| ||||||||  ||||||||||||||||||||    
T  30006658 atgtgtttataagtggggataatcatcaccacacaagccggttttgtgaggttgtgtacggcccaaccacgatttctaa 30006580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 30063346 - 30063268
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||| || |||| ||||   | ||| |||||||||| ||||||||  ||||||||||||||||||||    
T  30063346 atgtgtttataagtggggataatcatcaccacacaagccggttttgtgaggttgtgtatggcccaaccacgatttctaa 30063268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 93208 - 93123
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttagg-cccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| | || ||||||| ||| ||| |||||||||  || || |||||| |||||| |||||||||||    
T  93208 ctgacaatgtgtttataagtgggggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaactacgatttctaa 93123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 94113 - 94052
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtg 227  Q
    ||||||| |||||| ||||||||||| ||| | |||||||||| | | ||||||||||||||    
T  94113 gtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagtcggttttgtg 94052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 789430 - 789393
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||| || ||||||||||||||||||    
T  789430 ttttgtggggttgtgtaagacccaaccacgatttctaa 789393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 14127227 - 14127166
Alignment:
Q  205 tcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaa 266  Q
    |||| ||||||||||||||||| || |||||||||  |||||||| |||| ||| |||||||    
T  14127227 tcaccttataagtcggttttgtaggattgtgttagagccaaccacaatttataagatggtaa 14127166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 15988423 - 15988496
Alignment:
Q  186 ttataaatggagacaatcctcactttataagtcggttttgtgggg-ttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| ||| | |||||||||| | | ||| | ||||||||||| ||||||| ||||||||||||||||||||    
T  15988423 ttataagtgggggcaatcctcacctcacaagccagttttgtgggggttgtgttgggcccaaccacgatttctaa 15988496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 37812358 - 37812301
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgt 226  Q
    |||| |||||||||||||||||| ||| |||||||||||| | | |||||| ||||||    
T  37812358 atggcctgacaatgtgtttataagtggggacaatcctcacctcacaagtcgattttgt 37812301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 1926500 - 1926440
Alignment:
Q  200 aatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||||| | | || |||||||||| || ||||||||||| |||||||||||| |||||    
T  1926500 aatcctcacctcacaaatcggttttgtaggattgtgttaggctcaaccacgatttttaata 1926440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 19544455 - 19544372
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||||||||||||| ||| | ||||| |||| | | ||| ||||||||||| | | ||||||| |||||||||||||||||    
T  19544455 ctgataatgtgtttataagtgggggcaatc-tcacctcacaagccggttttgtggagctatgttaggtccaaccacgatttctaa 19544372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 31008612 - 31008572
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  31008612 cggttttgtggggttgtgttaggctcaaccacagtttctaa 31008572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 42895596 - 42895644
Alignment:
Q  294 acctgctatcaggtttccgctatcgggccacccacaatttatatccacg 342  Q
    ||||||||||||||||||||||| |   ||||||| |||||||||||||    
T  42895596 acctgctatcaggtttccgctatagactcacccaccatttatatccacg 42895644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 172 - 356
Target Start/End: Complemental strand, 5841 - 5657
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagag 271  Q
    |||||||||||||||||||| ||| | |||||||||  | | ||| |||||||| |||||||||||||||||||||||||||||||| ||||||  ||||    
T  5841 gtctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagatggtatcagag 5742  T
Q  272 catctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    | |||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||| ||||||    
T  5741 cctctccaagatccattgagccacctgctatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaata 5657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 5633 - 5545
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||||||||||||||||| ||| | |||||||||||| | ||| |||||||| ||||||||||||||||||||||  ||||||||    
T  5633 tggtttgacaatgtgtttataagtgggggcaatcctcacttcacaagccggttttgcggggttgtgttaggcccaaccataatttctaa 5545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 107)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 169 - 356
Target Start/End: Complemental strand, 41667083 - 41666895
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  41667083 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 41666984  T
Q  269 gagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| | ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||    
T  41666983 gagcctcctccaagatccgttgggccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaata 41666895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 166 - 349
Target Start/End: Original strand, 15480313 - 15480496
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||||| ||| | |||||||||| | | |||  |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  15480313 gtgatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagatggta 15480412  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
      ||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| |||| || |||||    
T  15480413 tcagagcctcttcaagatccattgggccacctgctatcaggtttccgctattgggccacccaccatttatgtccatgaaccaag 15480496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 177 - 349
Target Start/End: Complemental strand, 25258383 - 25258211
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatct 276  Q
    ||||| ||||||| | ||| | |||||||||| | | |||||||||||||||||||||||||  | |||||||||||||||| ||||||  ||||| |||    
T  25258383 acaatatgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttct 25258284  T
Q  277 ccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  25258283 ccaagatccattgggccacctgctatcaggtttccgctatcggaccacccacaatttatgtccacgaaccaag 25258211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 177 - 349
Target Start/End: Complemental strand, 25322173 - 25322001
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatct 276  Q
    ||||| ||||||| | ||| | |||||||||| | | |||||||||||||||||||||||||  | |||||||||||||||| ||||||  ||||| |||    
T  25322173 acaatatgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttct 25322074  T
Q  277 ccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  25322073 ccaagatccattgggccacctgctatcaggtttccgctatcggaccacccacaatttatgtccacgaaccaag 25322001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 175 - 348
Target Start/End: Original strand, 9368595 - 9368768
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||||||||||| ||||| |||||||||| | | ||| |||||||||||||||||||||||||||||||  ||||||||  |||||  ||||| |    
T  9368595 tgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaaggtggtatcagagcct 9368694  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    || |||||||||||||| |||||||||||||||||||||||| || |||||||| || ||| ||||||| ||||    
T  9368695 cttcaagatccattgggccacctgctatcaggtttccgctattggaccacccaccatgtatgtccacgaaccaa 9368768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 349
Target Start/End: Complemental strand, 6413741 - 6413567
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||||||||||| | | |||||||||||| | ||||| ||||||| |||||||||||||  |||||| ||||||||||||||||||  | ||| |    
T  6413741 tgacaatgtgtttataagtagggacaatcctcacctcataagccggttttttggggttgtgttaaacccaacaacgatttctaatatggtatcaaagcct 6413642  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    || |||||||||||||| ||||||||||||||| ||| |||||| ||||||||| |||||| ||||||| |||||    
T  6413641 cttcaagatccattgggccacctgctatcaggtatccactatcgagccacccaccatttatgtccacgaaccaag 6413567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 169 - 349
Target Start/End: Complemental strand, 24346827 - 24346646
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||| ||||||| ||| |  ||| ||||| | | ||| |||||||||||||||||||||| |||||||||||||| ||| ||||||  |    
T  24346827 atggcctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttttaagatggtatca 24346728  T
Q  269 gagcatc-tccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    |||| || |||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||    
T  24346727 gagcctcctccaagatccattgggccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaag 24346646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 218 - 349
Target Start/End: Complemental strand, 18333740 - 18333609
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||  ||||| ||| |||||||||| ||| ||||||||||||||||| |||||||    
T  18333740 cggttttgtggggttgtgttaggcccaaccacgaattctaagatggtatcagagcctcttcaagatccatcgggccacctgctatcaggttttcgctatc 18333641  T
Q  318 gggccacccacaatttatatccacgagccaag 349  Q
    ||||||||||| |||||| ||||||| |||||    
T  18333640 gggccacccaccatttatgtccacgaaccaag 18333609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 234 - 356
Target Start/End: Complemental strand, 95526 - 95404
Alignment:
Q  234 tgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaattt 333  Q
    ||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  95526 tgttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgccatcgggccacccaccattt 95427  T
Q  334 atatccacgagccaagtccaata 356  Q
    || ||||||| ||||| ||||||    
T  95426 atgtccacgaaccaagcccaata 95404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 310
Target Start/End: Complemental strand, 2063823 - 2063683
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||||||||||||||||||| ||| | |||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  2063823 atggtctgacaatgtgtttataagtgggggcaatcctcactc-acaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 2063725  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttc 310  Q
    |||| ||| ||||||||||||| |||| || |||||||||||    
T  2063724 gagcctcttcaagatccattggatcacatgttatcaggtttc 2063683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 174 - 356
Target Start/End: Original strand, 24531598 - 24531780
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| ||| | |||||||||| | | ||| || |||||||||||||||||| ||||||||||||||||||| ||||||  |||||     
T  24531598 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagatggtatcagagcc 24531697  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| | ||||||||||| ||||||||||||| |||| | |||||  |||||||  |||||| ||||||| ||||| ||||||    
T  24531698 tctctatgatccattgggccacctgctatcagttttctgttatcgaaccacccaacatttatgtccacgaaccaagcccaata 24531780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 169 - 349
Target Start/End: Complemental strand, 24270195 - 24270015
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||| ||||||| ||| |  ||| ||||| | | ||| |||||||||||||||||||||| || ||||||||||| ||| ||||||  |    
T  24270195 atggcctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacc-aaccacgatttttaagatggtatca 24270097  T
Q  269 gagcatc-tccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    |||| || |||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||    
T  24270096 gagcctcctccaagatccattgggccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaag 24270015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 21210006 - 21209854
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| |||||| ||||| | | ||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||     
T  21210006 ctgacaatttgtttataagtggggacaattctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtattagagcc 21209907  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| || ||| | ||||| |||||| ||||||||||||| ||||||| |||||    
T  21209906 tcttcacgattctttgggccacctgttatcaggtttccgttatcgggtcaccc 21209854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 169 - 349
Target Start/End: Original strand, 24528534 - 24528714
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    ||||||||||||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||  |    
T  24528534 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatca 24528633  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    |||| |||||| ||||||||||  |||||||||| || ||||   |||||  |||||||  |||||| ||||||| |||||    
T  24528634 gagcctctccatgatccattggaccacctgctattagttttctattatcgaaccacccaacatttatgtccacgaaccaag 24528714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 175 - 356
Target Start/End: Complemental strand, 6919512 - 6919332
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||||||||||| ||| |||||| ||||| | | ||| | |||||||| ||||||||||||| |||||||||||| ||| ||||||  | ||| |    
T  6919512 tgacaatgtgtttataagtggggacaattctcacctcacaag-cagttttgtgaggttgtgttaggctcaaccacgatttttaagatggtatcaaagcct 6919414  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    || |||||||||||| |||| ||||||||||||||||||| |||| |||| ||| |||||| ||||||| ||||| ||||||    
T  6919413 cttcaagatccattgagtcatctgctatcaggtttccgctttcggaccactcaccatttatgtccacgaaccaagcccaata 6919332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 174 - 326
Target Start/End: Original strand, 8098317 - 8098468
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||  |||||     
T  8098317 ctgacaatttgtttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcc 8098415  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| || ||| | ||||| |||||| ||||||||||||| |||||||||||||    
T  8098416 tcttcacgattctttgggccacctgttatcaggtttccgttatcgggccaccc 8098468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 213 - 348
Target Start/End: Complemental strand, 32908998 - 32908863
Alignment:
Q  213 taagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccg 312  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||| ||| || |||||| ||| |||||||||||||| || ||||||||||||||| |    
T  32908998 taagtcggttttgtggggttgtgttagactcaaccacaatttctaagatgatattagagcctcttcaagatccattgggccatctgctatcaggtttctg 32908899  T
Q  313 ctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||||||| ||||||| |||||| || |||| ||||    
T  32908898 ctatcgggtcacccaccatttatgtcaacgaaccaa 32908863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 222 - 349
Target Start/End: Original strand, 43117694 - 43117821
Alignment:
Q  222 tttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggc 321  Q
    ||||||||||||||||||||||||| ||||||||||| || |||  ||||| | ||||||||| |||||| ||||||||||||||||||||||||||| |    
T  43117694 tttgtggggttgtgttaggcccaacaacgatttctaagatagtatcagagcctttccaagatctattgggccacctgctatcaggtttccgctatcggac 43117793  T
Q  322 cacccacaatttatatccacgagccaag 349  Q
    ||||||  |||||| ||||||| |||||    
T  43117794 cacccatcatttatgtccacgaaccaag 43117821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 26137437 - 26137247
Alignment:
Q  168 gatggtctgacaatgtgttt-ataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaa 266  Q
    |||||||||||||||| ||| |||| ||| |||||||||||  | | |||| ||||||||||| || |||||||||||||||||||||||||  |||||     
T  26137437 gatggtctgacaatgttttttataagtggcgacaatcctcatctcacaagttggttttgtgggattatgttaggcccaaccacgatttctaaggtggtat 26137338  T
Q  267 tagagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
     ||||| | |||||||||   ||||| ||||||||||||||||| | | |||||||||||||  |||||| ||||||| ||||||||||||    
T  26137337 cagagcctactccaagatttgttgggccacctgctatcaggttttcaccatcgggccacccatcatttatgtccacgaaccaagtccaata 26137247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 226 - 340
Target Start/End: Complemental strand, 17150501 - 17150387
Alignment:
Q  226 tggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacc 325  Q
    |||||||||||||||| |||| ||||||| ||| ||||||  ||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  17150501 tggggttgtgttaggctcaactacgatttttaagatggtatcagagcctcttcaagatccattgggccacctactatcaggtttccgctatcgggccacc 17150402  T
Q  326 cacaatttatatcca 340  Q
    ||| |||||| ||||    
T  17150401 caccatttatgtcca 17150387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 19705902 - 19705986
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| | |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  19705902 ctgacaatgtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgttaggcccaaccacgatttctaa 19705986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 341
Target Start/End: Original strand, 20225040 - 20225207
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||| ||||||||||||||  |||||||||||| | | |||||| ||||||||||||||||||||  |||||||||||||||| ||| ||  | |||     
T  20225040 ctgacagtgtgtttataaatgaggacaatcctcacctcacaagtcgattttgtggggttgtgttaggttcaaccacgatttctaaaatgatatcatagcc 20225139  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    ||| |||||||||||| | ||| | ||||| |||||||| | ||||||  || || ||||||||||||    
T  20225140 tcttcaagatccattgtgccacttactatctggtttccgttttcgggcaccctactatttatatccac 20225207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 41666847 - 41666758
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  41666847 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 41666758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 28510090 - 28510174
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| || || |||||||||  | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  28510090 ctgacaatgtgtttataagtgaaggcaatcctcatctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 28510174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 363
Target Start/End: Complemental strand, 20510957 - 20510773
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatct 276  Q
    ||||||| ||||||| ||| || ||||||||| | | ||||||||||| | || |||| ||| | ||| ||| ||||| ||| ||||||  ||||| |||    
T  20510957 acaatgtatttataagtggggataatcctcacctcacaagtcggtttttttgg-ttgtattaagtccagccatgatttttaagatggtatcagagcgtct 20510859  T
Q  277 ccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaatactgatga 363  Q
    |||||||||| ||||  ||||||||||||||||| ||||| ||||||||| | |||||| ||||||| ||||| |||||| ||||||    
T  20510858 ccaagatccactgggctacctgctatcaggtttctgctattgggccaccc-ccatttatgtccacgaaccaagcccaatagtgatga 20510773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 185 - 326
Target Start/End: Complemental strand, 29909795 - 29909654
Alignment:
Q  185 tttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatc 284  Q
    ||||||| ||||| |||||||||| | | ||| ||||||||||| |||||||||||||||||||| ||||||||||||  |  ||||| ||| || |||     
T  29909795 tttataagtggaggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccaccatttctaatatgacatcagagcctcttcacgatt 29909696  T
Q  285 cattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    | ||| | |||||| ||||||||||||| |||| ||||||||    
T  29909695 ctttgagccacctgttatcaggtttccgttatcaggccaccc 29909654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 27133078 - 27132991
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||||||| ||||||||| ||  | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27133078 ctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 27132991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 1564658 - 1564568
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||| |||||| ||| | |||||||||| | | ||| | |||||||||||||||||||||| ||||||||||||||||    
T  1564658 gatggtctgacaatgtgattataagtgggggcaatcctcacatcacaagacagttttgtggggttgtgttaggctcaaccacgatttctaa 1564568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 13700815 - 13700749
Alignment:
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttat 335  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  13700815 gagcctcttcaagatccattgggtcacctgctatcaggtttccgctatcaggccacccaccatttat 13700749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 18333556 - 18333466
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||| ||| |  ||||||||| | | ||| |||||||||||||||||||||||||||||||| | ||||||    
T  18333556 gatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaa 18333466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 317
Target Start/End: Complemental strand, 38731929 - 38731780
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||| ||||||||||||||||||| ||   ||||||||||| | | |||||| ||||||| ||||||||||||| ||||||| |||||||| ||| ||      
T  38731929 gatgatctgacaatgtgtttataagtgagaacaatcctcacctcacaagtcgattttgtgaggttgtgttaggcacaaccaccatttctaagatgctatc 38731830  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    | ||| ||| ||| || ||||| |  ||||||||||||||||| ||||||    
T  38731829 atagcctcttcaaaattcattgagctacctgctatcaggtttctgctatc 38731780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 95351 - 95267
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| |||||||||||  | | ||| ||||||||||||||||||||||||||||||| || ||||||    
T  95351 ctgacaatgtgtttataagtggggacaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccaagaattctaa 95267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 8081340 - 8081252
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| ||||||||||| |||||| ||||||||||||||| ||| ||||||| |||||||| |||||| ||||||| ||||| ||||||    
T  8081340 agagcttctccaagatcgattgggccacctgctatcaggtatcccctatcggaccacccaccatttatgtccacgaaccaagcccaata 8081252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 335
Target Start/End: Complemental strand, 7134087 - 7133934
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcca 279  Q
    |||||||||||| |||||  ||| ||||||||  ||||| |||||||||||||||| |||||| |||||| |||||||||||| ||  ||||| ||||||    
T  7134087 atgtgtttataagtggagt-aattctcacttttcaagtccgttttgtggggttgtgctaggcc-aaccacaatttctaatatgatatcagagcctctcca 7133990  T
Q  280 agatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttat 335  Q
    ||||| |   | ||||||||||||| |||||||| ||| | |||| ||| ||||||    
T  7133989 agatctaccagatcacctgctatcaagtttccgcaatcagaccactcaccatttat 7133934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 11896376 - 11896301
Alignment:
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||| |||||||| |||||| ||||||| |||||    
T  11896376 tctccaagatccattgtgccacctactatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaag 11896301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 355
Target Start/End: Complemental strand, 11896716 - 11896588
Alignment:
Q  225 gtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccac 324  Q
    ||||||||||||||||   ||||||||||||||||||||||  ||| | ||| ||| |||||||| |  ||||| |||||||||| ||||||||| ||||    
T  11896716 gtggggttgtgttaggtttaaccacgatttctaatatggtatcagaacctcttcaaaatccattgagatacctgttatcaggttttcgctatcggaccac 11896617  T
Q  325 ccacaatttatatccacgagccaagtccaat 355  Q
    |||| |  ||| ||||||| |||||||||||    
T  11896616 ccacca--tatgtccacgaaccaagtccaat 11896588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 356
Target Start/End: Complemental strand, 17352706 - 17352572
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    ||||| |||||| ||||||| |||||||| |||||||| ||||||  ||||| ||| |||||||| ||| | ||| |||||||||||||||||||| |||    
T  17352706 ttttgcggggttatgttaggtccaaccaccatttctaagatggtatcagagcctcttcaagatcc-ttgagccacttgctatcaggtttccgctattggg 17352608  T
Q  321 ccacccacaatttatatccacgagccaagtccaata 356  Q
     |||| ||  ||||| ||||||| ||||| ||||||    
T  17352607 tcacctaccgtttatgtccacgaaccaagcccaata 17352572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 24487734 - 24487639
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||| ||||||||| ||| |  ||||||||| | | ||| |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  24487734 tggtctgaaaatatgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgatttctaatatggta 24487639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 257
Target Start/End: Original strand, 24647687 - 24647778
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    ||||||| | |||||||||||||||| ||| | |||||||||| | | ||| ||||||||||| ||||||||||| ||||||||||||||||    
T  24647687 gtgatggccggacaatgtgtttataactggtggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttcta 24647778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 265
Target Start/End: Complemental strand, 37657030 - 37656931
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||||| ||| |  |||||| || | | |||||||||||||||||||  ||||||||||||||| || ||||| ||||||    
T  37657030 gtgatggtctgacaatgtgtttataagtgggggtaatccttacctcacaagtcggttttgtggggttaagttaggcccaaccaccatgtctaacatggta 37656931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 7607595 - 7607677
Alignment:
Q  176 gacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| ||||||||| ||||||||||| |||| | | ||| ||||||||||| ||||||||||||||||||| |||||||||    
T  7607595 gacaatctgtttataagtggagacaatcttcacctcacaagccggttttgtggagttgtgttaggcccaaccatgatttctaa 7607677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 8081204 - 8081107
Alignment:
Q  169 atggtctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||| |||||||||||||||||| ||| |  |||||||||  | | ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  8081204 atggcctgacaatgtgtttataagtggggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggta 8081107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 340
Target Start/End: Complemental strand, 17423917 - 17423788
Alignment:
Q  212 ataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tccaagatccattgggtcacctgctatcaggtttc 310  Q
    ||||||||||||||||||||| |||||| | ||||||||| |||||| ||||||  | ||| || || ||||||  ||| | ||||||||||| ||||||    
T  17423917 ataagtcggttttgtggggttatgttagcctcaaccacgacttctaagatggtatcaaagcctcttcaaagatctgttgagccacctgctatccggtttc 17423818  T
Q  311 cgctatcgggccacccacaatttatatcca 340  Q
    ||||||||| | |||||| ||||| |||||    
T  17423817 cgctatcggacaacccaccatttacatcca 17423788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 9368830 - 9368913
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||| ||| | |||| ||||||| | ||| || || |||||||||||||||||||||||||| ||||||||    
T  9368830 tgacaatgtgtttataagtgggggcaattctcacttcacaagccgattatgtggggttgtgttaggcccaaccacaatttctaa 9368913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 356
Target Start/End: Complemental strand, 16704777 - 16704621
Alignment:
Q  199 caatcctcactttataagt-cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacct 297  Q
    |||||||||| |||||||| ||||||||||| |||||   || |||||||| ||||||||| ||| ||  ||||| ||| ||| |||| |||||  ||||    
T  16704777 caatcctcaccttataagttcggttttgtggtgttgtc--agacccaaccatgatttctaaaatgatatcagagcttcttcaatatcctttgggctacct 16704680  T
Q  298 gctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||| ||||| ||||||||| ||| ||  |||||| ||||||| ||||| ||||||    
T  16704679 gctatcatgtttcagctatcgggtcactcatcatttatgtccacgaaccaagcccaata 16704621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 25258154 - 25258095
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  25258154 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25258095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 25321944 - 25321885
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  25321944 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25321885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 265
Target Start/End: Complemental strand, 37782143 - 37782044
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||||| ||| | ||||| |||| | | |||  |||||||||| |||| ||||||||||||||| || ||||| ||||||    
T  37782143 gtgatggtctgacaatgtgtttataagtgggggcaatcatcacctcacaagctggttttgtggagttgagttaggcccaaccaccatgtctaacatggta 37782044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 8287797 - 8287886
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||| |||| ||||||||| ||| | |||||| ||| | | ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  8287797 tggtctggcaatttgtttataagtgggg-caatccccacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaata 8287886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 32908809 - 32908719
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||||||||||||||||||| ||||| ||||| |||| | | ||  |||||||| |||||| |||||| ||||||||||||||||||    
T  32908809 gatgatctgacaatgtgtttataagtggaggcaatcatcacctcacaaaccggttttgaggggttatgttagacccaaccacgatttctaa 32908719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 38976930 - 38977016
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||| | | |||||||||||| | | ||  ||||||||||| | |||||||||| ||||||||||||||||    
T  38976930 gtctgacaatgtgtttataagttgggacaatcctcacctcacaaaccggttttgtggaggtgtgttaggcacaaccacgatttctaa 38977016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 175 - 343
Target Start/End: Complemental strand, 2986096 - 2985927
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    |||||| |||||||||| | | | |||| ||||| ||| |||| || |||||||||||||||||||| ||||||| |||||||| ||||||  | | | |    
T  2986096 tgacaaagtgtttataagtcggggcaattctcaccttacaagttggatttgtggggttgtgttaggctcaaccaccatttctaagatggtatcaaaacct 2985997  T
Q  275 ct-ccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    || | ||| || ||| ||  || | |||| || |||||||||||||||||||||| |||||| |||||||    
T  2985996 ctgctaagttctattaggctacttcctataagatttccgctatcgggccacccaccatttatgtccacga 2985927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 18885454 - 18885546
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactt--tataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||| ||||||||| |||||| |   | ||| | ||||||||| |||||||||||| ||||||| ||||||||    
T  18885454 gatggtctgacaatgtgtttataagtggagacaaccctcacctcacacaagccagttttgtggagttgtgttaggcacaaccaccatttctaa 18885546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 21306881 - 21306970
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| |||||| ||||||| ||| | |||||||||| | | ||| |||| ||||||| ||||||||| ||||||||||||||||||    
T  21306881 atggtctgccaatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaa 21306970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 21314719 - 21314808
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| |||||| ||||||| ||| | |||||||||| | | ||| |||| ||||||| ||||||||| ||||||||||||||||||    
T  21314719 atggtctgccaatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaa 21314808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 24346591 - 24346502
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| |  ||||||||| | | ||| ||||||| |||||||||||||||| ||||||| ||||||||    
T  24346591 atggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaa 24346502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 13296887 - 13296975
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||||||||| ||| | ||| |||||| | | ||  |||||||||||| ||||||||| ||||||||||||||||||    
T  13296887 tggtctgacaatttgtttataagtgggggcaaccctcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaa 13296975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 15480551 - 15480642
Alignment:
Q  169 atggtctgacaatgtgtttataaatggaga--caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||||||| |||||||||| ||| |   |||||||||| | | ||| |||||||||||||||||||||||||||||||| ||||||||    
T  15480551 atggcctgacaacgtgtttataagtgggggatcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 15480642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 17016069 - 17016013
Alignment:
Q  300 tatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||    
T  17016069 tatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagtccaata 17016013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 20510735 - 20510643
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||||| ||||||||| ||| | |||||||||| | | ||  | ||||||||| |||||||||||||||| ||||||||||||    
T  20510735 gtgatggcctgacaatatgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggagttgtgttaggcccaaacacgatttctaa 20510643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 13296668 - 13296762
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||| ||||||| | ||||||| ||| | |||||||||| | | ||| | |||||||||| |||||||||||||||||||||||||||| ||||||    
T  13296668 tggtttgacaatttatttataagtgggggcaatcctcacctcacaagccagttttgtggg-ttgtgttaggcccaaccacgatttctaagatggta 13296762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 19522090 - 19522177
Alignment:
Q  178 caatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||| ||||||| | ||| | |||||||||| | | ||| ||||||||||||||||| || | |||||||||||||||||||||||||    
T  19522090 caatttgtttattagtgggggcaatcctcacctcacaagccggttttgtggggttgtatttgacccaaccacgatttctaatatggta 19522177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 33337435 - 33337376
Alignment:
Q  297 tgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| ||||| ||||||    
T  33337435 tgctatcaggtttccgccatcgggccacccaccatttatgtccacgaaccaagcccaata 33337376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 42295578 - 42295669
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||| ||| ||||||||| |||   |||||||||| | | ||| ||||||||||| ||||||||||||||||| || |||||||||||||||    
T  42295578 ctgataatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaacgacaatttctaatatggta 42295669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 6413511 - 6413441
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggccca 244  Q
    |||||||||||||||||| ||| | |||||||||| | ||||| || ||||||||||||||||||| ||||    
T  6413511 ctgacaatgtgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttagaccca 6413441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 12034683 - 12034773
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| ||| ||| |||||||||||||| |  ||||||||| | | ||| | ||||||| || ||||||||||||||||||||||||||||    
T  12034683 gatggcctgccaacgtgtttataaatgggggaaatcctcacctcacaagccagttttgtaggattgtgttaggcccaaccacgatttctaa 12034773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 13701151 - 13701069
Alignment:
Q  176 gacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||| ||| | |||| |||||   |  ||||||||||||||||| |||||||||| |||||||||||||||    
T  13701151 gacaatgtgtttataagtgggggcaattctcaccccaagagtcggttttgtggggtcgtgttaggcctaaccacgatttctaa 13701069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 16571551 - 16571461
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||||||||||||||| ||| ||| |  ||||||||| | |||| | |||||||||||||| ||||||| ||||| |||||||||||    
T  16571551 gatgatctgacaatgtgtttttaagtgggggaaatcctcacctcataaattggttttgtggggttatgttaggtccaacaacgatttctaa 16571461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 22925026 - 22925103
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||||  || ||||| ||| ||| || |||||||    
T  22925026 atgtgtttataaatggggacaatcctcacttcataagttggttttgtggaattatgttacgccaaactacaatttcta 22925103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 24269960 - 24269872
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| |  ||||||||| | | ||| ||||||| |||||||||||||||| ||||||| ||||||||    
T  24269960 atggcctgacaatgtgtttataagtggggt-aatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaa 24269872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 43117876 - 43117961
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||| |||||||||||||||||||||  | |||||||||  | | ||| ||||||| | ||||||||||||||||||| |||||||    
T  43117876 atggcctgacaatgtgtttataaatgagggcaatcctcatctcacaagccggttttatagggttgtgttaggcccaacaacgattt 43117961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 15438986 - 15439066
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||||||||||| ||||| ||| | ||||| |||| | | ||||| ||||| ||||||||||||||||| |||||||||||    
T  15438986 ctgacaatgtgtctataagtgggggcaatcatcacctcacaagtcagttttatggggttgtgttaggcctaaccacgattt 15439066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 21209770 - 21209706
Alignment:
Q  197 gacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||||| ||||| | | ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  21209770 gacaattctcacctcacaagccggttttgtggggttgtgttaagcacaaccacgatttctaatat 21209706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 326
Target Start/End: Complemental strand, 27133240 - 27133160
Alignment:
Q  246 ccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||||||||||||||||||||  ||||| ||| || ||| | ||||| |||||| ||||||||||||| ||||||| |||||    
T  27133240 ccacgatttctaatatggtatcagagcctcttcacgattctttgggccacctgttatcaggtttccgttatcgggtcaccc 27133160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 1028435 - 1028392
Alignment:
Q  222 tttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  1028435 tttgtggggttgtgttaggcccaaccaccatttctaacatggta 1028392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 7369731 - 7369798
Alignment:
Q  182 gtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccac 249  Q
    |||||||||| ||| | || ||||||| | | ||| ||||||||||||||||||||||||||||||||    
T  7369731 gtgtttataagtgggggcagtcctcacctcacaagccggttttgtggggttgtgttaggcccaaccac 7369798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 37781718 - 37781778
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtgg 228  Q
    |||||||||||||||||||||||||| ||  |||||||||||| | | |||||||||||||||    
T  37781718 gtgatggtctgacaatgtgtttataagtg--gacaatcctcacctcacaagtcggttttgtgg 37781778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 60092 - 60170
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||| | |||||||||| | | ||| ||||||||||||||| |||||| ||||| ||| ||||||||    
T  60092 atgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttagacccaatcacaatttctaa 60170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 15590049 - 15590111
Alignment:
Q  286 attgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||||| |||||||||||| |||||||||||||||| || ||| |||||| ||||||| ||||    
T  15590049 attgggccacctgctatcaagtttccgctatcgggctactcaccatttatgtccacgaaccaa 15590111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 24487550 - 24487508
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  24487550 cggttttgtggggttgtattagacccaaccacgatttctaata 24487508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 10846840 - 10846920
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||| ||  |  ||||| |||||||||||| || |||||||| ||||||||| ||||||||| ||||||||    
T  10846840 acaatgtgtttataagtgacggtaatccccactttataagttggatttgtggg-ttgtgttagacccaaccacaatttctaa 10846920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 17584197 - 17584238
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttagg 240  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  17584197 caatcctcactttacaagtcggttttgtggagttgtgttagg 17584238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 29909572 - 29909491
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttc 255  Q
    |||||||| | ||||||| ||||| |||||||||| | | || ||||||||||||| |||||||||| | |||||| |||||    
T  29909572 ctgacaatttatttataagtggaggcaatcctcacctcacaaatcggttttgtgggattgtgttaggtctaaccaccatttc 29909491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 33337496 - 33337451
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatgg 263  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||    
T  33337496 cggttttgtggggttgtgttaggttcaaccacgatttctaagatgg 33337451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 6415913 - 6415988
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttct 256  Q
    |||||||||||  |||| |||||| |||| | ||||||| |||||||| |||||| |||||| ||||||||||||||    
T  6415913 atgtgtttatatgtgga-acaatcttcacctcataagtccgttttgtgaggttgtattaggctcaaccacgatttct 6415988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 17352520 - 17352436
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| | ||||| |||| | | ||| |||||||||| ||||| ||||||| ||||||| | ||||||    
T  17352520 ctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtgaggttgcgttaggctcaaccaccacttctaa 17352436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 35167432 - 35167396
Alignment:
Q  222 tttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||||| ||||||    
T  35167432 tttgtggggttgtgttaggcccaaccacgacttctaa 35167396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 170630 - 170563
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaacc 247  Q
    |||||||||||| ||| | || ||||||| | | ||| |||||||||| |||||||||||||||||||    
T  170630 atgtgtttataagtgggggcagtcctcacctcacaagccggttttgtgaggttgtgttaggcccaacc 170563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 16707104 - 16707029
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttc 255  Q
    |||||||||||| ||| | ||||||| || | | |||  |||||||  ||||||||||||||||||||||||||||    
T  16707104 atgtgtttataagtgggggcaatcctaacctcacaagctggttttgcagggttgtgttaggcccaaccacgatttc 16707029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 265
Target Start/End: Complemental strand, 17016426 - 17016391
Alignment:
Q  230 gttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||||||||||||||||||||||||| ||||||    
T  17016426 gttgtgttaggcccaaccacgatttctaacatggta 17016391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 19522366 - 19522405
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  19522366 ttttgtggggttgtgttagacacaaccacgatttctaata 19522405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 26137185 - 26137110
Alignment:
Q  183 tgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||| | |||||||||  | | ||  ||||||||||||||| |||||| || |||||||||||||||    
T  26137185 tgtttataaatgggggcaatcctcatctcacaaaccggttttgtggggttatgttagacctaaccacgatttctaa 26137110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 37405076 - 37405162
Alignment:
Q  162 ttgagtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaacca 248  Q
    ||||| |||||||||| || |||||| ||| ||| | |||||| ||| | | ||| ||||||||||||||||| |||| ||||||||    
T  37405076 ttgagagatggtctgaaaaagtgtttgtaagtgggggcaatccccacctcaaaagccggttttgtggggttgtattagacccaacca 37405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 6637596 - 6637680
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||| |||||||||||||||||| ||| |  ||||||||| | | ||| |||||| | |||||||| ||| |||||||||||||||    
T  6637596 atggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttt-gcggggttgtattaagcccaaccacgattt 6637680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 9187332 - 9187369
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  9187332 ttttgtggggttgtgttagactcaaccacgatttctaa 9187369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 10416375 - 10416424
Alignment:
Q  177 acaatgtgtttataaa-tggagacaatcctcactttataagtcggttttg 225  Q
    |||||||||||||||| ||| ||||||||||||||||||| | |||||||    
T  10416375 acaatgtgtttataaagtggggacaatcctcactttataaattggttttg 10416424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 356
Target Start/End: Original strand, 17143228 - 17143309
Alignment:
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||| ||| |  || |||||||| ||||||||||| |  |||||||| |||||| ||||||| | ||||||||||    
T  17143228 ctccaagatcctttgagctacttgctatcaagtttccgctattgaaccacccaccatttatgtccacgaactaagtccaata 17143309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 30588906 - 30588857
Alignment:
Q  209 tttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| ||||||||| |||||||||||| | ||||||    
T  30588906 tttataagccggttttgttgggttgtgtaaggcccaaccacaaattctaa 30588857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 37076850 - 37076934
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||| ||| | |||||||||| ||| || ||||||||||||| || ||||||| ||||| | ||||| ||| ||||||    
T  37076850 atgtgtttataagtgggg-caatcctcaccttagaaatcggttttgtgggattctgttaggtccaacaatgatttgtaagatggta 37076934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 254
Target Start/End: Complemental strand, 1564484 - 1564456
Alignment:
Q  226 tggggttgtgttaggcccaaccacgattt 254  Q
    |||||||||||||||||||||||||||||    
T  1564484 tggggttgtgttaggcccaaccacgattt 1564456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 7092173 - 7092221
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaacc 247  Q
    |||||||||| | | ||| | ||||||||||||||||||||||||||||    
T  7092173 caatcctcacctcacaagccagttttgtggggttgtgttaggcccaacc 7092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 8098550 - 8098610
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgt 234  Q
    |||||||| |||||||||  | ||||||||||||| | | ||| |||||||||||||||||    
T  8098550 ctgacaatttgtttataagcgcagacaatcctcacctcacaagccggttttgtggggttgt 8098610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 11682413 - 11682377
Alignment:
Q  260 atggtaatagagcatctccaagatccattgggtcacc 296  Q
    |||||| |||| |||||||||||||||||||||||||    
T  11682413 atggtattagaacatctccaagatccattgggtcacc 11682377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 15438870 - 15438950
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaacca 248  Q
    |||||||||| ||||||||||||| ||| | |||||||||| | | ||| || |||| | |||||||||||| | ||||||    
T  15438870 gatggtctgataatgtgtttataagtgggggcaatcctcacctcacaagccgattttctagggttgtgttagactcaacca 15438950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 30770231 - 30770187
Alignment:
Q  312 gctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  30770231 gctatcgggccacccaccatttatgtccacgaaccaagcccaata 30770187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 31974261 - 31974289
Alignment:
Q  220 gttttgtggggttgtgttaggcccaacca 248  Q
    |||||||||||||||||||||||||||||    
T  31974261 gttttgtggggttgtgttaggcccaacca 31974289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 34328954 - 34328994
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||  |||||||||||||||| ||||||||||||    
T  34328954 cggttttgtgaagttgtgttaggcccaatcacgatttctaa 34328994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 166 - 356
Target Start/End: Original strand, 14294 - 14484
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||||| ||| ||||||| |||| | | ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  14294 gtgatggtctgacaatgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaagatggta 14393  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
      ||||| |||||||||||||||||| ||  || |||||||||||||||||||||||||| || |||||| |||||||  |||| ||||||    
T  14394 tcagagcctctccaagatccattgggccatatgttatcaggtttccgctatcgggccacctaccatttatgtccacgaatcaagcccaata 14484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 117)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 185 - 356
Target Start/End: Complemental strand, 22231382 - 22231211
Alignment:
Q  185 tttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatc 284  Q
    ||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||| |||    
T  22231382 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaaaatc 22231283  T
Q  285 cattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |||||| ||||||| ||||| ||||||    
T  22231282 cattgggccacctgctatcaggtttccgctatcgggccacctaccatttatgtccacgaaccaagcccaata 22231211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 169 - 356
Target Start/End: Original strand, 35788653 - 35788841
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | |||||||||| | | ||| ||||||| ||||||||||||||||||||||||||||||||| ||||||  |    
T  35788653 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaagatggtatca 35788752  T
Q  269 gagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| | ||||||||||| ||||| |||||||||||||||||||| |||| |||||||||| |||||| ||||||| ||||| ||||||    
T  35788753 gagcctcctccaagatccgttgggccacctgctatcaggtttccgttatcaggccacccaccatttatgtccacgaaccaagcccaata 35788841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 174 - 341
Target Start/End: Complemental strand, 40717526 - 40717359
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||| ||| ||||||||| ||| | |||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||     
T  40717526 ctgataatttgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcc 40717427  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||| |||||| |||||    
T  40717426 tctccaatatccattgggccacctgccatcaggtttccgctatcggaccacccaccatttatgtccac 40717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 166 - 356
Target Start/End: Complemental strand, 50543660 - 50543468
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||||||||| ||||| ||| | |||||||||| | | ||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||    
T  50543660 gtgatggcctgacaatgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatgata 50543561  T
Q  266 atagagcatctccaagatccat--tgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
      ||||| ||||||||||||||  | |  |||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||    
T  50543560 tcagagcctctccaagatccatatttgaccacctgctatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaata 50543468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 238 - 356
Target Start/End: Complemental strand, 28245782 - 28245664
Alignment:
Q  238 aggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatat 337  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |    
T  28245782 aggcccaaccacgatttctaatatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgctatcgggccacccaccatttatgt 28245683  T
Q  338 ccacgagccaagtccaata 356  Q
    |||||| ||||| ||||||    
T  28245682 ccacgaaccaagcccaata 28245664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 174 - 356
Target Start/End: Complemental strand, 21646586 - 21646405
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    ||||||||||||||| || | | |||||||||||| ||| ||||||||||| ||||| | | ||||||||||||||||||| ||| |||||| |||||      
T  21646586 ctgacaatgtgtttacaagtagggacaatcctcaccttacaagtcggttttatggggctctattaggcccaaccacgatttttaagatggtattagagtc 21646487  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||| |||||||||||||||||||| |||| | ||||||| ||| |||| |||||| |||| || ||||||||||||    
T  21646486 tctccaagattcattgggtcacctgctatcatgttttcactatcggacca-ccaccatttatgtccatgaaccaagtccaata 21646405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 174 - 356
Target Start/End: Complemental strand, 35819213 - 35819031
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||  ||| | |||||||| | | | ||| | |||||||| |||||||||||||||||||||||||| ||| |||| |  ||||      
T  35819213 ctgacaatttgtttatatgtgggggcaatcctcgcctcacaagccagttttgtgaggttgtgttaggcccaaccacgatttttaagatggcatcagagtc 35819114  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| ||||||| ||||| ||||||    
T  35819113 tctctaagatccattgggccacctgctatcaggtttccgctatcgggtcacccaccatttatgtccacgaaccaagcccaata 35819031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 4645661 - 4645810
Alignment:
Q  194 ggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtc 293  Q
    |||||||||| |||| ||| ||| |||||||||||| ||||||||| | |||||| ||||| ||| || |||  ||||| |||| |||||||||||||||    
T  4645661 ggagacaatcatcaccttacaagccggttttgtgggattgtgttagactcaaccatgatttataagatagtatcagagcctctcaaagatccattgggtc 4645760  T
Q  294 acctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||||||    
T  4645761 acctgctatcaggtttccgctatcgggccacccaccaattatgtccacga 4645810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 174 - 323
Target Start/End: Complemental strand, 34358115 - 34357966
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||||||| | |||||||||| | | ||| |||||||||||||||||||||||| ||| |||||||||||| ||| ||  |||||     
T  34358115 ctgacaatgtgtttataaatgggggcaatcctcacatcagaagccggttttgtggggttgtgttaggctcaaacacgatttctaagatgatatcagagcc 34358016  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggcca 323  Q
    ||| ||||||| |||||| ||| || ||||||||||||||||||||||||    
T  34358015 tctacaagatctattgggccacttgttatcaggtttccgctatcgggcca 34357966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 356
Target Start/End: Complemental strand, 35797061 - 35796880
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||| ||||||||| ||| | |||||||||| | | ||  | ||||||||||||||||||| ||||||| || |||||||| ||||||  ||||| |    
T  35797061 tgacaatatgtttataagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaagcccaactaccatttctaagatggtatcagagcct 35796962  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    || | |||||||||||   ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  35796961 cttcgagatccattggactacctgctatcaggtttccgctatcgggccacccaccatttatctccacgaaccaagcccaata 35796880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 177 - 326
Target Start/End: Original strand, 9685400 - 9685549
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatct 276  Q
    ||||| ||||||||| ||| | |||||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |||    
T  9685400 acaatttgtttataagtggggccaatcctcacctcacaagtcggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 9685499  T
Q  277 ccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
     ||  || | ||||| |||||| ||||||||||||| |||||||||||||    
T  9685500 tcacaattctttgggccacctgttatcaggtttccgttatcgggccaccc 9685549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 53815014 - 53814862
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||     
T  53815014 ctgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcc 53814915  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| || ||| | ||||| |||||| ||||||||||| | ||||||| |||||    
T  53814914 tcttcacgattctttgggccacctgttatcaggtttctgttatcgggtcaccc 53814862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 177 - 356
Target Start/End: Original strand, 6218206 - 6218385
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatct 276  Q
    ||||| ||||||||| ||| | ||||| |||| | | ||| ||||||||||| |||||||||| | |||||||||||||||| ||||||  ||||| |||    
T  6218206 acaatatgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagatggtatcagagcctct 6218305  T
Q  277 ccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||| |||||| ||||||||||||||||||| || ||||||  |||||| | || || ||||| ||||||    
T  6218306 ccaagatccattggatcacctactatcaggtttccgctatcaggtcacccatcatttatgtacaagaaccaagcccaata 6218385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 327
Target Start/End: Original strand, 7926333 - 7926480
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcca 279  Q
    |||||||||||| ||| | || |||||||   | ||| ||||||||||||| ||||||||||||||||| |||||| || ||||||  ||||| ||||||    
T  7926333 atgtgtttataagtgggggcattcctcacaacacaagccggttttgtggggctgtgttaggcccaaccaagatttcgaagatggtatcagagcctctcca 7926432  T
Q  280 agatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||||||    
T  7926433 agatccattgggccacctgctatcaggtttccactatagggccaccca 7926480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 349
Target Start/End: Complemental strand, 11036839 - 11036656
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||||||||||||||| ||| | |||||||||| | | ||| || || ||||||||||||||||||| |||||| |||| ||| ||||||    
T  11036839 gtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaatttttaagatggta 11036740  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
      |||||  ||| ||||||||||||| ||||| |||| |||||||||||||| |||||||||| ||| || |||| || |||||    
T  11036739 tcagagccactctaagatccattgggccacctactattaggtttccgctatcaggccacccaccattaatgtccatgaaccaag 11036656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 174 - 356
Target Start/End: Original strand, 52559566 - 52559750
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| ||| | ||||| |||| | | ||| ||||||||||||||||||||||||||||||| ||||||||| || |||  |||||     
T  52559566 ctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatagtatcagagcc 52559665  T
Q  274 t-ctccaagatcc-attgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    | ||| |||||||  ||||| |||||||||||| ||||  | ||||||||||||||| |||||| ||||||| ||||| ||||||    
T  52559666 tcctcaaagatccgtttgggccacctgctatcaagtttatgttatcgggccacccaccatttatgtccacgaaccaagcccaata 52559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 326
Target Start/End: Complemental strand, 14783273 - 14783120
Alignment:
Q  173 tctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagc 272  Q
    ||||||||| ||||||||| ||  | ||||| |||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  14783273 tctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 14783174  T
Q  273 atctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
     ||| ||  || | ||||| |||||| |||||||||| || |||||||||||||    
T  14783173 ctcttcacaattctttgggccacctgttatcaggttttcgttatcgggccaccc 14783120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 326
Target Start/End: Complemental strand, 12869347 - 12869196
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||| | ||||||| ||| |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||  |    
T  12869347 tgacaatttatttataagtggggacaatcctcacctcataagacggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtct 12869248  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    || || |||   ||||  |||||| ||||||||||||| ||||||| |||||    
T  12869247 cttcacgattttttggcccacctgttatcaggtttccgttatcgggtcaccc 12869196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 40716686 - 40716553
Alignment:
Q  194 ggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tccaagatccattgggt 292  Q
    |||| ||||||| || ||| ||| ||| ||||||||||||||||||||||||||| | ||||||| ||||||  ||||| || |||| ||||| |||||     
T  40716686 ggaggcaatccttaccttacaagccggatttgtggggttgtgttaggcccaaccatggtttctaagatggtatcagagcctcatccacgatccgttgggc 40716587  T
Q  293 cacctgctatcaggtttccgctatcgggccaccc 326  Q
    |||||||||||||||||||| |||||||||||||    
T  40716586 cacctgctatcaggtttccgttatcgggccaccc 40716553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 53828608 - 53828456
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | ||||| || ||||||||||||||||||||||||||||| |||||||| ||||||  |||||     
T  53828608 ctgacaatttgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagagcc 53828509  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    | |  | ||| | ||||| |||||  ||||||||||||| |||||||||||||    
T  53828508 ttttaacgattctttgggccacctattatcaggtttccgttatcgggccaccc 53828456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 5846141 - 5846236
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||| ||||||||| ||| | |||||||||| | ||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  5846141 tggtctgacaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgcgttaggctcaaccacgatttctaatatggta 5846236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 218 - 340
Target Start/End: Complemental strand, 6666676 - 6666554
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||||| |||| | ||| |||||||  ||||| |||||||||| ||| |||  |||||    
T  6666676 cggttttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctacaagatctgttgggccacctgctataaggattcttctatc 6666577  T
Q  318 gggccacccacaatttatatcca 340  Q
    ||| ||||||| |||||||||||    
T  6666576 gggtcacccaccatttatatcca 6666554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 28245619 - 28245525
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||| |||||||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  28245619 gtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaata 28245525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 221 - 335
Target Start/End: Complemental strand, 36686179 - 36686065
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    ||||||||| |||||||| ||||||||| ||||| ||| || |||  ||||| ||| |||||| || |||| ||||||||||||||||||||||||||||    
T  36686179 ttttgtgggattgtgttatgcccaaccatgatttttaagatagtataagagcctcttcaagattcaatgggccacctgctatcaggtttccgctatcggg 36686080  T
Q  321 ccacccacaatttat 335  Q
    |||||||| ||||||    
T  36686079 ccacccaccatttat 36686065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 328
Target Start/End: Original strand, 4464286 - 4464449
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttat---aagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||||||||||||||||||||| | | ||| ||||||   ||   ||| || |||||||||||| |||||| ||||||||||| |||||| ||||||    
T  4464286 atggtctgacaatgtgtttataaataggggcaaccctcaccggatcacaagccgattttgtggggttttgttagacccaaccacgaattctaagatggta 4464385  T
Q  266 atagagcatc-tccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccac 328  Q
      ||||| || | |||||||||||||||||| |||||||||||||||| ||||| | |||||||    
T  4464386 tcagagcctccttcaagatccattgggtcacatgctatcaggtttccgttatcgagtcacccac 4464449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 335
Target Start/End: Complemental strand, 4905796 - 4905660
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctg 298  Q
    |||||||||| | | ||| | ||||| ||| ||| |||||||| |||||| ||||||||| ||| ||  ||||| |||||||| ||||||||| ||||||    
T  4905796 caatcctcacctaacaagcccgttttttggagttttgttaggctcaaccatgatttctaagatgatatcagagcctctccaagctccattgggccacctg 4905697  T
Q  299 ctatcaggtttccgctatcgggccacccacaatttat 335  Q
    |||| ||||||| ||||||||||||||||| ||||||    
T  4905696 ctattaggtttctgctatcgggccacccaccatttat 4905660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 50543423 - 50543331
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||| ||||| ||| | ||||||||||   | ||| |||||||||||||||||||||||||||||||||||||||||    
T  50543423 gtgatggtctgacaatgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 50543331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 21498353 - 21498444
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21498353 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaatatggta 21498444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 320
Target Start/End: Original strand, 1518163 - 1518309
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||  | | ||| ||||||||||||||||||||||||| ||||||||||||||| ||||||  |||||     
T  1518163 ctgacaatttgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtatcagagcc 1518262  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    | | || ||| | ||||| |||||| |||||||||| || |||||||    
T  1518263 ttttcacgattctttgggccacctgttatcaggtttacgttatcggg 1518309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 356
Target Start/End: Complemental strand, 13555507 - 13555385
Alignment:
Q  229 ggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccac 328  Q
    |||| |||||||||||||||| |||||| ||||||||  ||||| |||||||||||||||||  ||||||||||||||||||||||    ||||||||||    
T  13555507 ggttttgttaggcccaaccacaatttctgatatggtatcagagcctctccaagatccattggaccacctgctatcaggtttccgct----ggccacccac 13555412  T
Q  329 aatttatatccacgagccaagtccaata 356  Q
     ||||||  |||||| ||||| ||||||    
T  13555411 gatttat-gccacgaaccaagcccaata 13555385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 21498794 - 21498880
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  21498794 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 21498880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 22863467 - 22863557
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| |||||||||||||||||| ||| | ||||||||||   | ||| |||||||||||||||||||||||||||||||||||||||||    
T  22863467 gatggcctgacaatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 22863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 22231163 - 22231074
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| |||||||||||| | | ||| ||||||||||||||||| ||||| |||||||||||||||||    
T  22231163 atggcctgacaatgtgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtattaggtccaaccacgatttctaa 22231074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 348
Target Start/End: Original strand, 22445476 - 22445625
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctg 298  Q
    ||||||||||  || |||||||||||||||||||||||||| ||||||||| | |||||| ||||||  ||||| ||| |||||||||||| | |||||     
T  22445476 caatcctcaccctacaagtcggttttgtggggttgtgttagacccaaccacaaattctaagatggtatcagagcctcttcaagatccattgagccaccta 22445575  T
Q  299 ctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||| ||| || | ||||||| | ||||||  ||||| ||||||| ||||    
T  22445576 ctattaggattacactatcggactacccaccgtttatgtccacgaaccaa 22445625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 22845537 - 22845448
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| |  ||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  22845537 atggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 22845448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 356
Target Start/End: Complemental strand, 25324253 - 25324172
Alignment:
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||| |||  ||||| ||||||    
T  25324253 ctccaagatccattgggccacctgctatcaagtttccgctatcgggccacccaccatttatatctacgcaccaagcccaata 25324172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 35788888 - 35788977
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | |||||||||  | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  35788888 atggcctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 35788977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 229 - 328
Target Start/End: Complemental strand, 30530192 - 30530093
Alignment:
Q  229 ggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccac 328  Q
    |||| |||||||| ||||||| |||||||| ||||||  ||||| ||||||||||||||| || ||||||||||||| |||||||||||| | |||||||    
T  30530192 ggttatgttaggctcaaccacaatttctaagatggtatcagagcctctccaagatccattaggccacctgctatcagatttccgctatcgcgtcacccac 30530093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 356
Target Start/End: Complemental strand, 5398430 - 5398348
Alignment:
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||| |||||| ||||||| ||||| ||||||    
T  5398430 tctccaagatccaatgggtcatctgctatcaggtttcccctatcggaccacccaccatttatgtccacgaaccaagcccaata 5398348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 9685627 - 9685717
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||| ||||| ||||||||| ||| | |||||||||| | | ||| ||||||| |||||||||||||||||||||||||||||||||||    
T  9685627 tggtctaacaatttgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaata 9685717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 22827531 - 22827621
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| ||||||| |||||||||| ||| | |||||||||| | | ||| ||||||||| |||||||||||||||||||||||||||||||    
T  22827531 gatggcctgacaacgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaa 22827621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 327
Target Start/End: Complemental strand, 30566119 - 30565965
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||||||||||| |||   |||| ||||| | ||||| | ||||||| || |||||||| ||||||||||| ||||| | ||||||  |||||     
T  30566119 ctgacaatgtgtttataagtgggagcaattctcacatcataagccagttttgtaggtttgtgttaagcccaaccacgttttcttagatggtatgagagcc 30566020  T
Q  274 t-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
    | ||| ||||||||||||  ||| |||||||| ||||| ||||||||||||||||    
T  30566019 tcctctaagatccattggaccacttgctatcaagtttcggctatcgggccaccca 30565965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 53814759 - 53814673
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| || ||||||||| | | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  53814759 ctgacaatttgtttataagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaata 53814673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 355
Target Start/End: Complemental strand, 25324078 - 25323937
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgc 313  Q
    |||||| ||||||||||||||||   || |||||| ||||||||||||||||  ||||| |||||||||||  ||||| ||||| || | |||||||| |    
T  25324078 aagtcgattttgtggggttgtgtagcgcacaaccatgatttctaatatggtagcagagcctctccaagatctgttgggccacctactcttaggtttccac 25323979  T
Q  314 tatcgggccacccacaatttatatccacgagccaagtccaat 355  Q
     |||||  ||||||| |||||||||||||  ||||| |||||    
T  25323978 catcggatcacccaccatttatatccacgcaccaagcccaat 25323937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 39902653 - 39902564
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| ||| | |||||||||| | | |||  ||||||||||||||||||||||||||||||| ||||||||    
T  39902653 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccaccatttctaa 39902564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 294
Target Start/End: Original strand, 17111555 - 17111682
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||  ||| || |||||||| ||| | |||||||||| ||| ||   |||||||||||||||||||||||||||||||||||||||| ||||||    
T  17111555 gtgatggtcctacagtgagtttataagtgggg-caatcctcaccttaaaaactggttttgtggggttgtgttaggcccaaccacgatttctaagatggta 17111653  T
Q  266 atagagcatctccaagatccattgggtca 294  Q
      ||||  | ||||||||||||| |||||    
T  17111654 tcagagtctttccaagatccattaggtca 17111682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 20821972 - 20822059
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||||||| ||||||||| ||| | |||| ||||| | | ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  20821972 ctgacaatttgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaatat 20822059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 25052851 - 25052942
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||| |  ||||| ||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25052851 ctgacaatttgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaacatggta 25052942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 32002327 - 32002465
Alignment:
Q  180 atgtgtttataaa-tggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcc 278  Q
    ||||||||||||| ||| | ||||| |||| ||| || ||||||||||| |||||| |||| ||||| ||| |||| ||| ||||||  ||| | |||||    
T  32002327 atgtgtttataaagtgggggcaatcttcaccttacaaatcggttttgtgaggttgtattagacccaaacacaatttttaagatggtatcagaacctctcc 32002426  T
Q  279 aagatccattgggtcacctgctatcaggtttccgctatcg 318  Q
    |||||| ||| ||||| |||||||||||||||||||||||    
T  32002427 aagatctatt-ggtcatctgctatcaggtttccgctatcg 32002465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 33107862 - 33108037
Alignment:
Q  167 tgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaa 266  Q
    ||||||||| |  |||||||||||| ||||||||||| |||| | | |||   ||||||| || || |||||  |||||||||||||| ||||||||||     
T  33107862 tgatggtcttaacatgtgtttataagtggagacaatcttcacctcacaagcaagttttgtaggattatgttaaacccaaccacgatttttaatatggtat 33107961  T
Q  267 tagagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
     | ||| | || ||| || ||||||| |||||||||| ||||||||| |||||| |||||||| |||||| |||||    
T  33107962 caaagcttccttcaaaattcattgggccacctgctataaggtttccgttatcggaccacccaccatttatgtccac 33108037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 54054887 - 54054804
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||| ||||||||| ||| | |||| ||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  54054887 acaatttgtttataagtgggggcaattctcacctcataagccgtttttgtggggttgtgttaggcccaaccacgatttctaata 54054804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 41188023 - 41187933
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||| ||||||| |  || |||||||||| | | |||| ||||||||||||||| |||| |||||||||||||||||||    
T  41188023 gatggtctgacaatgtatttataagtaaaggcaatcctcacctcacaagttggttttgtggggttgagttatgcccaaccacgatttctaa 41187933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 36685960 - 36685871
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatgg 263  Q
    |||||||||||||||||||||| |   |||||||| | | ||||| ||||||||||||||| |||| |||||||||||||||||| ||||    
T  36685960 ctgacaatgtgtttataaatgggggttatcctcacctcacaagtcagttttgtggggttgtattagacccaaccacgatttctaagatgg 36685871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 54055064 - 54054971
Alignment:
Q  233 gtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    |||||||||||||||||| ||||||||||||||  ||||| ||| || |||   ||||| |||||| ||||||||||||| |||||||||||||    
T  54055064 gtgttaggcccaaccacgctttctaatatggtatcagagcctcttcacgattttttgggccacctgttatcaggtttccgttatcgggccaccc 54054971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 5398684 - 5398620
Alignment:
Q  285 cattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||    
T  5398684 cattgggccacctgctatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaag 5398620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 306
Target Start/End: Original strand, 13637389 - 13637521
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagag-ca 273  Q
    ||||||||||||||||| | | | ||||| |||||| | || | |||||||||||||||| | || |||||||||||||||||| |||||| ||||| |     
T  13637389 tgacaatgtgtttataagtaggggcaatcttcacttcacaatttggttttgtggggttgtctaagacccaaccacgatttctaaaatggtattagagcct 13637488  T
Q  274 tctccaagatccattgggtcacctgctatcagg 306  Q
    |||| ||||||| |||||  ||| |||||||||    
T  13637489 tctctaagatccgttgggctaccagctatcagg 13637521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 356
Target Start/End: Original strand, 22822356 - 22822532
Alignment:
Q  181 tgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tcca 279  Q
    ||||||||||| ||| |  |||||||||   | ||| |||||||||| |||||| ||||| |||||||| | |||||| || |||  ||||| || | ||    
T  22822356 tgtgtttataagtgggggaaatcctcaccacacaagccggttttgtgcggttgtattaggtccaaccacaaattctaagattgtatcagagcctcctaca 22822455  T
Q  280 agatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||  | |||||  ||||||||||||||||||||||||||||||| ||| || || |||||||  ||||||||||||    
T  22822456 agactcgttgggctacctgctatcaggtttccgctatcgggccactcaccatatacatccacgcaccaagtccaata 22822532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 27634307 - 27634219
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| |||||||||||||||||  ||| |||||||||||||| |||||||| ||||||||  ||||| ||||||| ||||| ||||||    
T  27634307 agagcctctccaagatccattggaccacttgctatcaggtttctgctatcggaccacccactgtttatgtccacgaaccaagcccaata 27634219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 348
Target Start/End: Complemental strand, 35645727 - 35645600
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    ||||||| || |||||||||| |||||||||||    |||| ||||||  ||||| |||| | ||||||| ||| ||| |||||||| ||||||||||||    
T  35645727 cggttttatgaggttgtgttaagcccaaccacgg---ctaacatggtatcagagcctctcaacgatccatggggccacatgctatcaagtttccgctatc 35645631  T
Q  318 gggccacccacaatttatatccacgagccaa 348  Q
    ||||||||| | |||||| ||||||| ||||    
T  35645630 gggccacccgccatttatgtccacgaaccaa 35645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 37836082 - 37836170
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| ||||||| ||| | |||||||| | ||| ||| ||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  37836082 acaatgtatttataagtgggggcaatcctctccttacaagccggttttgtggggttgtgttaggcctaaccacaatttctaagatggta 37836170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 53559350 - 53559291
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| ||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  53559350 caatcctcaccttacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 53559291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 400656 - 400566
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||| ||| |  ||||||||| | | ||| |||||||||| |||||||||| || ||||||| ||||||||    
T  400656 gatggtctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgttaagctcaaccacaatttctaa 400566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 8902632 - 8902762
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca-tctcc 278  Q
    |||||||||| | ||||| |||||||| | | | ||| | ||||||||||||| ||||||| |||||||||||| |||  ||||||  |||||| ||||     
T  8902632 atgtgtttattagtggaggcaatcctctcctcacaagccagttttgtggggttatgttaggtccaaccacgattgctaggatggtatcagagcattctct 8902731  T
Q  279 aagatccattgggtcacctgctatcaggttt 309  Q
    |||||| |||||| |||||| ||||||||||    
T  8902732 aagatctattgggccacctgttatcaggttt 8902762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 35645436 - 35645311
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgg 319  Q
    ||||| || |||||||||| |||||||||||    |||| ||||||  ||||| |||| | ||||||| ||| ||| |||||||| ||||||||||||||    
T  35645436 gttttatgaggttgtgttaagcccaaccacgg---ctaacatggtatcagagcctctcaacgatccatggggccacatgctatcaagtttccgctatcgg 35645340  T
Q  320 gccacccacaatttatatccacgagccaa 348  Q
    ||||||| | |||||| ||||||| ||||    
T  35645339 gccacccgccatttatgtccacgaaccaa 35645311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 5398301 - 5398221
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacg 250  Q
    |||||||||||||||||||||||  || | |||||||||  | | ||| |||||||||||||||||||||||||||||||||    
T  5398301 atggtctgacaatgtgtttataagagggg-caatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacg 5398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 5398557 - 5398477
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||| ||||||| |||||||||    
T  5398557 acaatgtgtttataactgggg-caatcctcacctcacaagccggttttgtggggttgtgttaggtccaaccatgatttctaa 5398477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 9279218 - 9279299
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaacc 247  Q
    ||||||| |||||||||||||||||| ||| | ||||| |||| | |  || ||||||||||||||||||||||||||||||    
T  9279218 gtgatggcctgacaatgtgtttataagtgggggcaatcatcacctcactagccggttttgtggggttgtgttaggcccaacc 9279299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 35609567 - 35609491
Alignment:
Q  182 gtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| ||| | |||||||||| | | ||||||||||||||||||||||| |  ||||||||||||||||||    
T  35609567 gtgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgtaacacccaaccacgatttctaa 35609491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 53828374 - 53828290
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| ||| | |||||||||| | ||||  || ||||||||||||||||||||||||| ||| ||||||||    
T  53828374 ctgacaatttgtttataagtgggggcaatcctcacctcataaaccgattttgtggggttgtgttaggcccaatcacaatttctaa 53828290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 12005691 - 12005620
Alignment:
Q  277 ccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||| ||| |||||| || |||| ||||    
T  12005691 ccaagatccactgggtcacctactatcaggtttccgctatcaggccacacaccatttatgtcaacgaaccaa 12005620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 35609788 - 35609705
Alignment:
Q  182 gtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||| || |||||||| ||||||||| ||||||    
T  35609788 gtgtttataagtggggccaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccatgatttctaagatggta 35609705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 35645858 - 35645779
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaa 245  Q
    |||||||||||||||||||||||||| ||| | |||||||||| | | ||| | ||||| | ||||||||||||||||||    
T  35645858 gtgatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttttagggttgtgttaggcccaa 35645779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 35796826 - 35796743
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||| ||| | |||||||||| | | ||| |||||||||| |||||||||| | |||||||| ||||||||    
T  35796826 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtgttaagtccaaccaccatttctaa 35796743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 2463805 - 2463891
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||| ||||| ||| | ||||||| || | | ||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  2463805 ctgacaatttgtgtataagtgggggcaatccttacctcacaagccggttttgtggggttgtgttaggcccagccaccatttctaata 2463891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 320
Target Start/End: Complemental strand, 9908876 - 9908770
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgc 313  Q
    ||||||||| |||| |||||| |||| || || |||||| ||||| ||||||  ||||  ||||||||||| |||||  ||||||||||||| ||||||     
T  9908876 aagtcggttctgtgtggttgtattagacctaatcacgatatctaagatggtatcagagtctctccaagatctattggaccacctgctatcagatttccgt 9908777  T
Q  314 tatcggg 320  Q
    |||||||    
T  9908776 tatcggg 9908770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 336
Target Start/End: Complemental strand, 18528541 - 18528374
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    |||||||||||| | || ||| | |||||||||| | | || ||||||||||| | || |||||| |||||||||||||||||| ||||||  ||||| |    
T  18528541 tgacaatgtgttaacaattgggggcaatcctcacctcacaaatcggttttgtgagattttgttagacccaaccacgatttctaagatggtatcagagcct 18528442  T
Q  275 c-------tccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttata 336  Q
    |        ||||||||  ||||| |||||| ||||||| |||||||||| |||||||||| |||||||    
T  18528441 ccttcaagaccaagatctgttgggccacctgttatcaggcttccgctatc-ggccacccaccatttata 18528374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 21684992 - 21685081
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||| |||    ||||||||| | | ||| || |||||||||||||||||| |||||||||| ||||||||    
T  21684992 atggcctgacaatgtgtttataagtgggataaatcctcacctcacaagccgattttgtggggttgtgttaagcccaaccacaatttctaa 21685081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 26030318 - 26030402
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||| |||||||||||||| |||||| | |||||| |||||| |||| |  ||||||| |||||||| ||||||    
T  26030318 atgtgtttataaatgg-gacaatcctcacttcataagttgattttgtagggttgagttaagttcaaccacaatttctaagatggta 26030402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 11036595 - 11036507
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatgg 263  Q
    ||||||||||||||||| | | | ||||| |||| | | ||| |||||||| ||||||||||||| ||||||||| |||||||| ||||    
T  11036595 tgacaatgtgtttataagttggggcaatcatcacctcacaagccggttttgcggggttgtgttagacccaaccacaatttctaagatgg 11036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 12869114 - 12869030
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| ||| | ||||| |||| | | ||| ||||||||||||||||||||||||  ||| |||||||||||    
T  12869114 ctgacaatttgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggctaaactacgatttctaa 12869030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 18528298 - 18528218
Alignment:
Q  178 caatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||| ||| | |||||||||| | | || ||| |||||| ||||||||||||  |||||||||||||||||    
T  18528298 caatgtgtttataagtggcggcaatcctcacctcacaaatcgattttgtagggttgtgttagatccaaccacgatttctaa 18528218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 28073262 - 28073182
Alignment:
Q  178 caatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||| |||| || ||||| ||| |||||| | | |||  ||||||||||||||||||||||||||||||| ||||||||    
T  28073262 caatgtatttacaagtggaggcaaccctcacctcacaagctggttttgtggggttgtgttaggcccaaccacaatttctaa 28073182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 7572673 - 7572626
Alignment:
Q  293 cacctgctatcaggtttccgctatcgggccacccacaatttatatcca 340  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  7572673 caccttctatcaggtttccgctattgggccacccaccatttatatcca 7572626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 24513397 - 24513290
Alignment:
Q  222 tttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    ||||| |||||||||||||||||| |||||||||||| ||| ||  ||||| | ||| |||||| |||||  || ||||||||||  |||||||||| ||    
T  24513397 tttgtagggttgtgttaggcccaatcacgatttctaacatgatatcagagcctcctctaagatctattggaccatctgctatcagacttccgctatcagg 24513298  T
Q  321 ccacccac 328  Q
     |||||||    
T  24513297 tcacccac 24513290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 1333552 - 1333506
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  1333552 aagtcggttttgtagggttgtattagacccaaccacgatttctaata 1333506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 16066064 - 16066150
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||   |||||||| || ||||||||||||||||||| ||||||||||    
T  16066064 ctgacaatttgtttataagtgggggcaatcctcacctcacaaactggttttgtaggattgtgttaggcccaaccaccatttctaata 16066150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 40726746 - 40726804
Alignment:
Q  200 aatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||| | | ||| ||||||||| || ||||||||||||||||||||||||||||    
T  40726746 aatcctcacctcacaagccggttttgtaggattgtgttaggcccaaccacgatttctaa 40726804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 44118950 - 44118864
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||| |||||||||||||||||| ||| |  ||||||||| | | ||| | ||||||||||||||||||||  || ||||||||||    
T  44118950 gatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagcccgttttgtggggttgtgttagagcccaccacgattt 44118864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 2516242 - 2516287
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatgg 263  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||    
T  2516242 cggttttgtggggttgtgttaggtccaaccacaatttctaagatgg 2516287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 6218441 - 6218522
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||| ||| | ||||| |||| | | ||| ||||||| |||  ||||||||||| ||||||||||||||||    
T  6218441 acaatgtgtttataagtgggggcaatcatcacctcacaagccggttttatggaattgtgttaggctcaaccacgatttctaa 6218522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 7926604 - 7926641
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||| |||||||||    
T  7926604 ttttgtggggttgtgttaggcccaaccatgatttctaa 7926641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 19125716 - 19125793
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccac 249  Q
    |||||| ||||||||||||||||||   |||| |||| ||| ||| |||||||||| |||||||| || |||||||||    
T  19125716 gtctgaaaatgtgtttataaatggatgtaatcatcaccttaaaagccggttttgtgaggttgtgtaagacccaaccac 19125793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 21041356 - 21041477
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcca 279  Q
    |||||||||||| ||| || ||||||||| | | ||  |||||||| |  ||| |||||||| ||||||| | |||||| || ||| |||||| ||||||    
T  21041356 atgtgtttataagtggggaaaatcctcacctcacaaaccggttttgcgaagttatgttaggcacaaccacaaattctaagatagtattagagcctctcca 21041455  T
Q  280 agatccattgggtcacctgcta 301  Q
    ||||||| |||| || ||||||    
T  21041456 agatccaatgggccatctgcta 21041477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 27464333 - 27464272
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtg 235  Q
    ||||||| |||||||||| ||||| |||||||||| | | ||| ||||||||||||||||||    
T  27464333 ctgacaaagtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtg 27464272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 31254500 - 31254423
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggccc 243  Q
    ||||||| |||||||||||||||||| ||| | |||||||||| ||| ||  |||||||||| || || |||||||||    
T  31254500 gtgatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaaaccggttttgtgaggatgagttaggccc 31254423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 35175029 - 35175117
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||||||||||||||||||  || |  |||| |||| | | |||||| |||||| |||||||||||||||||||||| ||||||||    
T  35175029 atggcctgacaatgtgtttataagagggggtaatcatcacctcacaagtcgattttgtagggttgtgttaggcccaaccac-atttctaa 35175117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 43743034 - 43743123
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggttt 309  Q
    ||||| ||||||| |||||| || ||||||||||| ||| || |||  ||||| |||| |||||||||| |  |||||||||||||||||    
T  43743034 gttttttggggttatgttagacctaaccacgatttataagatagtatcagagcctctcaaagatccatttgaccacctgctatcaggttt 43743123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 17111759 - 17111851
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||||||||||||||| ||| |  | || |||||| | ||| || |||| || |||||||||||| |||||||| ||||||||    
T  17111759 gtgatggcctgacaatgtgtttataagtggggttattcatcacttcaaaagccgattttatgaggttgtgttaggtccaaccacaatttctaa 17111851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 45784911 - 45784871
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  45784911 cggttttgtgaggttgtgttaggcccaaccaccatttctaa 45784871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 52827467 - 52827419
Alignment:
Q  217 tcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||| |||||| |||||||||||||||||||| ||||||||| ||||||    
T  52827467 tcggctttgtgaggttgtgttaggcccaaccatgatttctaagatggta 52827419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 348
Target Start/End: Complemental strand, 6778640 - 6778589
Alignment:
Q  297 tgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||||||||||||||||||||||||||||| | |||||| || |||| ||||    
T  6778640 tgctatcaggtttccgctatcgggccaccccccatttatgtctacgaaccaa 6778589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 26549536 - 26549591
Alignment:
Q  287 ttgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacg 342  Q
    |||||||||||||||||||||||| | |||| |||||||||  |||||| ||||||    
T  26549536 ttgggtcacctgctatcaggtttctgttatcaggccacccatcatttatgtccacg 26549591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 28246169 - 28246110
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgt 234  Q
    ||||||||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||    
T  28246169 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgt 28246110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 35485232 - 35485343
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcca 279  Q
    |||||||||||| ||| | || ||||||| ||| | |  ||||||||||||||||||||| |||||| || |  ||||| |||||| |||||  | ||||    
T  35485232 atgtgtttataagtgggggcagtcctcaccttacacgctggttttgtggggttgtgttagacccaactacaaaatctaagatggtattagagtctgtcca 35485331  T
Q  280 agatccattggg 291  Q
     |||||||||||    
T  35485332 tgatccattggg 35485343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 52559804 - 52559887
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||| |||   |||| ||||| | | ||| ||||||||| || |||| ||||||||||||| |||||||||    
T  52559804 tgacaatgtgtttataagtgggagcaattctcacctcacaagccggttttgtaggattgtattaggcccaaccatgatttctaa 52559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 20726786 - 20726740
Alignment:
Q  310 ccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||||| |||||||||||||  ||||| ||||||    
T  20726786 ccgctatcgggccacccaccatttatatccacgcaccaagcccaata 20726740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 21646344 - 21646270
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||||||||||||||| | |||||||||| ||| ||| | ||||||||  |||||||||| || |||||| ||||    
T  21646344 atgtgtttataaatgggggcaatcctcaccttacaagccagttttgtgatgttgtgttagacctaaccacaattt 21646270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 43743261 - 43743299
Alignment:
Q  217 tcggttttgtggggttgtgttaggcccaaccacgatttc 255  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  43743261 tcggttttgtggggttgtgttagacccaaacacgatttc 43743299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 22867146 - 22867187
Alignment:
Q  202 tcctcactttataagtcggttttgtggggttgtgttaggccc 243  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||    
T  22867146 tcctcaccttacaagccggttttgtggggttgtgttaggccc 22867187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 29168959 - 29169048
Alignment:
Q  218 cggttttgt-ggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcagg 306  Q
    ||||||||| ||||||| ||||||| |||||   | ||| ||||||||| || ||| | |||||| ||||||||| ||||||||||||||    
T  29168959 cggttttgtaggggttgagttaggctcaacccaaaattcgaatatggtattaaagcctatccaagttccattgggccacctgctatcagg 29169048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 50870519 - 50870482
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  50870519 ttttgtggggttgtgttaggtccaaccacaatttctaa 50870482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 356
Target Start/End: Complemental strand, 21750316 - 21750180
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgg 319  Q
    |||||||| ||||||||||| ||||| ||||| || ||| ||||||  ||||| |||  || || |||||| |||| ||||||| | ||||||| |  ||    
T  21750316 gttttgtgaggttgtgttagacccaatcacgaattttaagatggtatcagagcctctttaaaattcattggatcacatgctatctgatttccgcaaatgg 21750217  T
Q  320 gccacccacaatttatatccacgagccaagtccaata 356  Q
    | || ||||  ||||| ||||||| |||| |||||||    
T  21750216 gtcatccaccgtttatgtccacgaaccaaatccaata 21750180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 25324312 - 25324352
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| || |||||||||| ||||||||||||||||    
T  25324312 cggttttgtgaggctgtgttaggcgcaaccacgatttctaa 25324352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 31039391 - 31039348
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||    
T  31039391 aagtcggttttgtggagttgtgttagg-ccaaccacaatttctaa 31039348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 253
Target Start/End: Complemental strand, 40716504 - 40716476
Alignment:
Q  225 gtggggttgtgttaggcccaaccacgatt 253  Q
    |||||||||||||||||||||||||||||    
T  40716504 gtggggttgtgttaggcccaaccacgatt 40716476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 41743173 - 41743129
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||| ||||| |||||||| |||||||||||||||    
T  41743173 ttttgtgaggttgtattaggtccaaccaccatttctaatatggta 41743129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 47760553 - 47760517
Alignment:
Q  213 taagtcggttttgtggggttgtgttaggcccaaccac 249  Q
    ||||||||||||||||||||||||||| | |||||||    
T  47760553 taagtcggttttgtggggttgtgttagactcaaccac 47760517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 112)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 169 - 356
Target Start/End: Original strand, 26176902 - 26177089
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| ||||||||||| |||||| ||  | |||||||||| | | ||  |||||||||||||||||||||||||||||| |||||||||| ||| ||  |    
T  26176902 atggcctgacaatgtgcttataagtgagggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaaccgcgatttctaagatgatatca 26177001  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  26177002 gagcctctccaagatccattgggccacctgctatcagatttccgctatcggaccacccaccatttatatccacgaaccaagtccaata 26177089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 343
Target Start/End: Original strand, 30369828 - 30370003
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    ||||||| |||||| ||||||||| | | | |||||||||| | | |||   ||||||||||||||||||||||||||||||||||||||| || |||      
T  30369828 gatggtccgacaatatgtttataagtaggggcaatcctcacctcacaagatagttttgtggggttgtgttaggcccaaccacgatttctaagattgtatc 30369927  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||    
T  30369928 agagcctctccaagatccattgggtcacctgctatcaggtttccactatcgggccacccaccatttatgtccacga 30370003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 169 - 349
Target Start/End: Complemental strand, 4113096 - 4112916
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||       
T  4113096 atggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcg 4112997  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    |||| |||||||||||||||| | ||||  |||||||||||||||||| || |||||||| |||||| ||||||| |||||    
T  4112996 gagcctctccaagatccattgagccaccatctatcaggtttccgctattggaccacccaccatttatgtccacgaaccaag 4112916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 166 - 356
Target Start/End: Complemental strand, 2859720 - 2859530
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||| | ||| |  ||||||||| | | ||| |||||||||| ||||||||||| ||||||||  |||||||| ||||||    
T  2859720 gtgatggtctgacaatgtgtttattagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttagccccaaccatcatttctaagatggta 2859621  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
     |||||| ||| |||||||||||||| ||||| |||| ||||||| ||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  2859620 ttagagcctcttcaagatccattgggccaccttctattaggtttctgctatcgggccacccaccatttatgtccacgaaccaagcccaata 2859530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 4098493 - 4098306
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||||| ||| ||||||||||||| ||| | |||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||||||||  |||||      
T  4098493 gatggtttgataatgtgtttataagtgggggcaatcctcaccttacaagttggttttgtggg-ttgtgttaggcccaaccacgatttctaagttggtatc 4098395  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||  ||| |||||||||||||| ||||||| |||||||||| |||||||||||||||||  ||||| ||||||| ||||| ||||||    
T  4098394 agagactcttcaagatccattgggccacctgcaatcaggtttctgctatcgggccacccaccctttatgtccacgaaccaagcccaata 4098306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 218 - 356
Target Start/End: Original strand, 33156776 - 33156915
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaagatccattgggtcacctgctatcaggtttccgctat 316  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||| |||| |||||||||||||||||||||||||    
T  33156776 cggttttgtggggttgtgttaggcccaaccacgatttctaagatggtattagagcctactccaagatccgttggttcacctgctatcaggtttccgctat 33156875  T
Q  317 cgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||| |||| |||||| |||||||  |||| ||||||    
T  33156876 cgggccatccaccatttatgtccacgaatcaagcccaata 33156915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 218 - 356
Target Start/End: Original strand, 35772072 - 35772210
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| |   |||||||||||||| || ||||||||||||||||||||||    
T  35772072 cggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagccttctcaagatccattgggccatctgctatcaggtttccgctatc 35772171  T
Q  318 gggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||| |||||| ||||||| ||||| ||||||    
T  35772172 gggccacccaccatttatgtccacgaaccaagcccaata 35772210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 166 - 349
Target Start/End: Original strand, 16162924 - 16163107
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||||||||||| ||| ||| ||||| |||||| | ||||  || ||||||||||||||||||| | ||||||| |||| ||| ||| ||    
T  16162924 gtgatggcctgacaatgtgtttttaagtggggacaaacctcacctcataaaccgattttgtggggttgtgttagactcaaccacaatttttaagatgata 16163023  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
      | ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||    
T  16163024 tcaaagcctctccaagatccaatgggccacctgctatcaggtttccgctatcgggccacctaccatttatgtccacgagccaag 16163107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 356
Target Start/End: Complemental strand, 39348436 - 39348255
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    |||||| |||||||||| ||| | |||||||||| | | ||  ||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||| |    
T  39348436 tgacaacgtgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaac-acgatttctaagatggtatcagagcct 39348338  T
Q  275 c-tccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    | |||||| ||||||||| ||||||||||||||||||| ||||||| |||||||| |||||| ||||||| ||||| ||||||    
T  39348337 cctccaaggtccattgggccacctgctatcaggtttccactatcggaccacccaccatttatgtccacgaaccaagcccaata 39348255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 182 - 348
Target Start/End: Complemental strand, 51460519 - 51460353
Alignment:
Q  182 gtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaag 281  Q
    |||||||||| ||| |  |||| |||||||| ||| | |||||||||||||||||||||||||||||  |||||||| ||| ||  ||||| ||||||||    
T  51460519 gtgtttataagtggtggtaatcttcactttacaagccagttttgtggggttgtgttaggcccaaccataatttctaaaatgatatcagagcctctccaag 51460420  T
Q  282 atccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||| | ||||||| ||||    
T  51460419 atccattgggccacctgctatcaggtttccgctatcgggcgacccaccatttgtgtccacgaaccaa 51460353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 178 - 356
Target Start/End: Original strand, 27413350 - 27413528
Alignment:
Q  178 caatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctc 277  Q
    |||||||| ||||| |||||||||||||||| | | ||| || ||||||| |||||||||||| ||||||||||||||||| ||| ||  ||||| ||||    
T  27413350 caatgtgtgtataactggagacaatcctcacctcacaagccgattttgtgaggttgtgttaggtccaaccacgatttctaagatgatatcagagcctctc 27413449  T
Q  278 caagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||| ||| |  |||||| |||||| |||||||||||||||||||||| |||||| |||||||  |||| ||||||    
T  27413450 caagatctattagaccacctgttatcagatttccgctatcgggccacccaccatttatgtccacgaatcaagcccaata 27413528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 166 - 356
Target Start/End: Original strand, 38733143 - 38733328
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||||| ||| |||||| ||||  | | |||||||||||||| | ||||||||||  |||||||||||||||| ||||||    
T  38733143 gtgatggtctgacaatgtgtttataagtgg-gacaattctcatctcacaagtcggttttgtgagattgtgttaggttcaaccacgatttctaagatggta 38733241  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
      ||||  |||||||||||||||||  ||||||||||||||||||||||||    |||||||| ||||||||| |||| | ||| ||||||    
T  38733242 tcagagtctctccaagatccattggaccacctgctatcaggtttccgctat----ccacccaccatttatatctacgaactaagcccaata 38733328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 26173547 - 26173372
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||||||||||||||||||||||| ||| | |||| ||||| || |||| ||||||||||||||||||||||| ||||||||  ||||||| ||| ||      
T  26173547 gatggtctgacaatgtgtttataagtgggggcaattctcaccttgtaagccggttttgtggggttgtgttaggtccaaccaccctttctaaaatgatatc 26173448  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    ||||| ||| | | |||||| ||  ||||||||||||||||||||||||||| || ||||| |||||| |||||||    
T  26173447 agagcctcttcgatatccatcggaccacctgctatcaggtttccgctatcggaccccccaccatttatgtccacga 26173372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 170 - 326
Target Start/End: Original strand, 51588987 - 51589143
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatag 269  Q
    |||||||||||| ||||||||| ||  | |||||||||| | | ||| |||||||||||||||||||||||||||||||| |||||||||||||||  |     
T  51588987 tggtctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaatatggtatcaa 51589086  T
Q  270 agcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| ||| || ||| | ||||| |||||| ||||||||||||| |||||||||||||    
T  51589087 agcctcttcacgattctttgggccacctgttatcaggtttccgttatcgggccaccc 51589143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 343
Target Start/End: Complemental strand, 25145805 - 25145636
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||||| ||||| | ||| | |||||||||| | | ||| ||| ||||||||||||||||||||||||||| ||||||||| ||| ||  |||||     
T  25145805 ctgacaatgtatttattagtgggggcaatcctcacctcacaagccggatttgtggggttgtgttaggcccaaccatgatttctaagatgatatcagagcc 25145706  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    ||||||||||| ||||   |||||||||||||||||||| |||||| |||||||| ||| || |||||||    
T  25145705 tctccaagatctattgacccacctgctatcaggtttccgttatcggaccacccaccattaatgtccacga 25145636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 356
Target Start/End: Original strand, 38668125 - 38668306
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||||||||||| ||| | ||||| |||  | | ||| |  ||||||||||||||||||||||||| ||| |||||||| ||||||  ||||| |    
T  38668125 tgacaatgtgtttataagtgggggcaatcatcatctcacaagccaattttgtggggttgtgttaggcccaatcacaatttctaagatggtatcagagcct 38668224  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||| |||| |  |||||| |||| || ||||| ||||||    
T  38668225 ctccatgatccattgggtcacctgttatcaggtttctgctatcgggtcacctatcatttatgtccatgaaccaagcccaata 38668306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 170 - 326
Target Start/End: Original strand, 3169761 - 3169917
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatag 269  Q
    |||||||||||| ||||||||| ||| | ||||| |||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  3169761 tggtctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcag 3169860  T
Q  270 agcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||   || || ||| | || || |||||| ||||||||||||| |||||||||||||    
T  3169861 agttccttcacgattctttaggccacctgttatcaggtttccgttatcgggccaccc 3169917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 170 - 326
Target Start/End: Original strand, 51589801 - 51589957
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatag 269  Q
    |||||||||||| ||||||||| ||  | |||||||||| | | ||| || |||||||||||||||||||||||||||||||||||||||||||||  ||    
T  51589801 tggtctgacaatttgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaatatggtatcag 51589900  T
Q  270 agcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| ||| || ||| | ||||| |||||  ||| ||||||||| |||||||||||||    
T  51589901 agcctcttcacgattctttgggccacctattattaggtttccgttatcgggccaccc 51589957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 177 - 356
Target Start/End: Original strand, 7307723 - 7307902
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatct 276  Q
    ||||||||||||||| ||||| |||| ||||| | | ||||||||||||| || || ||||||||| |||||  |||||||| ||| ||  | ||   ||    
T  7307723 acaatgtgtttataagtggaggcaattctcacctcacaagtcggttttgttggattatgttaggcctaaccataatttctaagatgatatcatagtcact 7307822  T
Q  277 ccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
     ||||||||||||||||  ||||||||||||||||||||| || |||||||| |||||| ||||||| |||| |||||||    
T  7307823 tcaagatccattgggtcgtctgctatcaggtttccgctattggaccacccaccatttatgtccacgaaccaaatccaata 7307902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 17452918 - 17452790
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||| ||||||| ||| | ||||| |||| | | ||| ||||||||||||||||||||||||| ||||||||||||||| |||||| ||    
T  17452918 atggcctgacaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtatta 17452819  T
Q  269 gagcatctccaagatccattgggtcacct 297  Q
    |||| |||| || |||||||||| |||||    
T  17452818 gagcctctctaaaatccattgggccacct 17452790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 25713251 - 25713339
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  25713251 agagcctctccaagatccattgggccacctgctatcaagtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaata 25713339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 173 - 304
Target Start/End: Complemental strand, 8870996 - 8870865
Alignment:
Q  173 tctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagc 272  Q
    ||||||||||||||||||| | | | |||| ||||| | ||||| || |||||||||||||||||||| |||||||| |||||||| ||||||  ||||     
T  8870996 tctgacaatgtgtttataagttggggcaattctcacctcataagccgtttttgtggggttgtgttaggtccaaccaccatttctaagatggtatcagagt 8870897  T
Q  273 atctccaagatccattgggtcacctgctatca 304  Q
     ||||||| |||||||||| ||||||||||||    
T  8870896 ctctccaatatccattgggccacctgctatca 8870865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 25145578 - 25145486
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||| | ||| | |||||||||| | | |||||||||||||| ||||||||||| ||||||||||||||||||    
T  25145578 gtgatggtctgacaatgtgtttattagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttagacccaaccacgatttctaa 25145486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 40079151 - 40079235
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  40079151 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 40079235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 51460083 - 51460003
Alignment:
Q  226 tggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcagg 306  Q
    |||||||||||||||||||||||| |||||||| |||||| ||| || |||||||||||||||||| ||||||||||||||    
T  51460083 tggggttgtgttaggcccaaccacaatttctaagatggtattagcgcctctccaagatccattgggccacctgctatcagg 51460003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 51589221 - 51589316
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||| ||||||||| ||  | |||||||||| | | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51589221 tggtctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaatatggta 51589316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 335
Target Start/End: Complemental strand, 31496433 - 31496295
Alignment:
Q  197 gacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacc 296  Q
    |||||| || || ||| ||| ||||||| |||||||||||||| | ||| |||||||||||| || ||| |||||  |||  ||||||||||||  ||||    
T  31496433 gacaattcttaccttacaagccggttttatggggttgtgttagactcaatcacgatttctaagatagtattagagtctctttaagatccattggaccacc 31496334  T
Q  297 tgctatcaggtttccgctatcgggccacccacaatttat 335  Q
    |||||||||||| |||||||||| |||||||| ||||||    
T  31496333 tgctatcaggttcccgctatcggaccacccaccatttat 31496295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 35772257 - 35772347
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| |||||||||||||||||| ||| | ||||||| || | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  35772257 gatggcctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 35772347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 4112783 - 4112678
Alignment:
Q  251 atttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagt 350  Q
    |||||||| ||||||  ||||| |||||||||||||||||  ||||||||||||||||||||||||||  |||||||| |||||| || |||| |||||     
T  4112783 atttctaagatggtatcagagcctctccaagatccattggaccacctgctatcaggtttccgctatcgaaccacccaccatttatgtcaacgaaccaagc 4112684  T
Q  351 ccaata 356  Q
    ||||||    
T  4112683 ccaata 4112678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 17452769 - 17452680
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||| ||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  17452769 atggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 17452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 202 - 343
Target Start/End: Original strand, 35892083 - 35892224
Alignment:
Q  202 tcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgcta 301  Q
    ||||||| |||||||  || ||||||||||||||||| ||||| ||||||||||||| | ||||  ||||  ||| |||||| ||||||| ||| |||||    
T  35892083 tcctcaccttataagctggatttgtggggttgtgttaagcccatccacgatttctaagaaggtatcagagtctcttcaagattcattgggccacttgcta 35892182  T
Q  302 tcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    |||  |||| ||||||||| ||||||| |||||| |||||||    
T  35892183 tcatatttctgctatcggggcacccaccatttatgtccacga 35892224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 290
Target Start/End: Original strand, 17402573 - 17402697
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||| |||||| || ||  | ||||| |||| | | |||| ||||| || |||||||||||||||| |||||||||| ||| ||||||    
T  17402573 gtgatggtctgacaatttgtttaaaagtgcgggcaatcttcacctcaaaagtgggtttcgtagggttgtgttaggcccgaccacgatttttaagatggta 17402672  T
Q  266 atagagcatctccaagatccattgg 290  Q
      |||||||||||||||||||||||    
T  17402673 tcagagcatctccaagatccattgg 17402697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 356
Target Start/End: Complemental strand, 12376732 - 12376576
Alignment:
Q  200 aatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcc-aagatccattgggtcacctg 298  Q
    ||||||||| | | ||| || |||| |||||||| |||||| ||||| |||||||||||  ||||| |||||||||    ||||||||||||| ||||||    
T  12376732 aatcctcacctcacaagccgtttttatggggttgagttaggtccaacgacgatttctaagttggtattagagcatccgttaagatccattgggccacctg 12376633  T
Q  299 ctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||| ||| |||||| ||||||| || |||||| ||||||| ||||| ||||||    
T  12376632 ctatcagg-ttctgctatcaggccacctaccatttatgtccacgaaccaagcccaata 12376576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 20208616 - 20208529
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||| ||| | |||||||||| | ||| | |||||| ||||||||||||||||||||||||||||||||||    
T  20208616 atggtctgacaatgtgtttataagtgggggcaatcctcacctcata-gccggttt-gtggggttgtgttaggcccaaccacgatttctaa 20208529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 38733373 - 38733465
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||| ||||||||| ||  | |||||||||| | ||| | |||||||||| |||||||||||||||||| |||||||||||    
T  38733373 gtgatggtctgacaatatgtttataagtgagggcaatcctcacctcataggccggttttgtgaggttgtgttaggcccaacaacgatttctaa 38733465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 39348204 - 39348120
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||||| |||||||||  |||  || ||||| |||||||||||||||| ||||||||||||||||||    
T  39348204 ctgacaatgtgtttataagtggaggcaatcctcaacttaccagccggttctgtggggttgtgttagacccaaccacgatttctaa 39348120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 40316129 - 40316037
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagc 272  Q
    |||||||||||| ||| | |||||||||| | ||||| |||||||||| |||||||||||  ||||||||||||||||| |||||| ||||||    
T  40316129 atgtgtttataagtggggtcaatcctcacctcataagccggttttgtgaggttgtgttagatccaaccacgatttctaacatggtattagagc 40316037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 52961440 - 52961500
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccac 328  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52961440 agagcctcttcaagatccattgggccacctgctatcaggtttccgctatcgggccacccac 52961500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 38668351 - 38668430
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaa 245  Q
    |||||||| ||||||||||||||||| ||| | ||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  38668351 gtgatggtttgacaatgtgtttataagtgggggcaatcatcaccttacaagtcggttttgtgggattgtgttaggcccaa 38668430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 25137388 - 25137302
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||| ||||||||| |   | |||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  25137388 ctgacaatttgtttataagtatgggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacaatttctaata 25137302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 33157230 - 33157304
Alignment:
Q  184 gtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||| |||||||| ||| |  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  33157230 gtttataagtggggacaatccccacctcgtaagtcggttttgtggggttgtgttaggcccaatcacgatttctaa 33157304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 39544406 - 39544477
Alignment:
Q  185 tttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||| |||||||||||||||| |||| ||||||||||||||||||  ||||||||||| ||||||||    
T  39544406 tttataaatggggacaatcctcactttacaagttggttttgtggggttgtgt--ggcccaaccaccatttctaa 39544477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 348
Target Start/End: Original strand, 5572664 - 5572800
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatct--ccaagatccattgggtcacctgctatcaggtttcc 311  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||| |||||| |||||| | |    |||||||||| | ||||||||||  || ||||     
T  5572664 aagttggttttgtggggttgtgttaagcccaactacgatttctaaaatggtattagagcctgtaattaagatccattagatcacctgctactagatttct 5572763  T
Q  312 gctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||||| |||||| ||| |||||| ||||||| ||||    
T  5572764 gctatcaggccacacactatttatgtccacgaaccaa 5572800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 309
Target Start/End: Complemental strand, 26347059 - 26346919
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||| |||||| |||||||||||| |||||||||||||||| | | ||| | ||||||||||||||||||| |||  |||||||||||||| ||| ||      
T  26347059 gatgatctgacgatgtgtttataagtggagacaatcctcacctcacaagcccgttttgtggggttgtgtta-gcctcaccacgatttctaagatgatatc 26346961  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggttt 309  Q
    ||||| ||  ||| |||| ||||  |||||||||| ||||||    
T  26346960 agagcctcctcaaaatccgttggaccacctgctattaggttt 26346919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 52961575 - 52961664
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    |||||||||||||||||||||||| ||  | |||||||||| | | ||| ||||||| ||||||||||||||| ||||||| ||||||||    
T  52961575 gatggtctgacaatgtgtttataagtgagggcaatcctcacctcaaaagccggttttatggggttgtgttaggtccaaccatgatttcta 52961664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 2859485 - 2859393
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||||||||||||||| ||| | ||||||| || | | ||| ||||| |||| ||||||||||||||||||||| ||||||||    
T  2859485 gtgatggcctgacaatgtgtttataagtgggggcaatccttacctcacaagccggttctgtgaggttgtgttaggcccaaccaccatttctaa 2859393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 349
Target Start/End: Complemental strand, 9146905 - 9146773
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaagatccattgggtcacctgctatcaggtttccgctat 316  Q
    ||||||||||| |||||| || || ||||||  |||||||| ||||||  ||||| | ||||||||||||||||  || |||| || ||||| |||||||    
T  9146905 cggttttgtggagttgtgctacgctcaaccataatttctaagatggtatcagagccttctccaagatccattggaccaactgcaataaggttaccgctat 9146806  T
Q  317 cgggccacccacaatttatatccacgagccaag 349  Q
    |||| ||||||| |||||| ||||||| |||||    
T  9146805 cgggtcacccaccatttatgtccacgaaccaag 9146773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 25713384 - 25713476
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||| ||| | ||||| |||| | | ||| | ||||||||| ||||||||||||| |||||| ||||||||    
T  25713384 gtgatggtctgacaatgtgtttataagtgggggcaatcgtcacctcacaagccagttttgtggagttgtgttaggcctaaccaccatttctaa 25713476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 26177142 - 26177226
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||||||| ||| | |||||||||| | | ||  | |||||||||||||||||||||||||||||||||||||||    
T  26177142 ctgacaacgtgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggggttgtgttaggcccaaccacgatttctaa 26177226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 27413573 - 27413665
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||| | | || |||||||| || ||||||||||||| |||||| |||||||||    
T  27413573 gtgatggcctgacaatatgtttataagtggaggcaatcctcacctcacaaatcggttttatgaggttgtgttaggctcaaccatgatttctaa 27413665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 11234223 - 11234338
Alignment:
Q  182 gtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaa 280  Q
    |||||||||| ||| |||| | ||||| | ||||| ||||||||||||||||| |||||||||||||| | || ||| |||||| |||||| | ||||||    
T  11234223 gtgtttataagtggggacagttctcacctcataagccggttttgtggggttgtattaggcccaaccacaaattataagatggtattagagcctcctccaa 11234322  T
Q  281 gatccattgggtcacc 296  Q
    ||||| ||||| ||||    
T  11234323 gatccgttgggccacc 11234338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 341
Target Start/End: Original strand, 17208657 - 17208720
Alignment:
Q  278 caagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    |||||||| ||| | || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  17208657 caagatcccttgagccatctgctatcaggtttccgctatcgggccacccaccatttatatccac 17208720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 369735 - 369813
Alignment:
Q  279 aagatccattgggtcacctgctatcaggtttccgctatc-gggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||| ||| |||||||||||||||||||||| ||| ||||||| |||||| ||||||| ||||| ||||||    
T  369735 aagatccattggatcagctgctatcaggtttccgctatcggggtcacccaccatttatgtccacgaaccaagcccaata 369813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 25255305 - 25255394
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||  |||||||||||| || ||  |||||| ||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  25255305 gatggtcaaacaatgtgttta-aagtgatgacaattctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25255394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 29265997 - 29266043
Alignment:
Q  219 ggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  29265997 ggttttgtggggttgtgttaggcccaaccacgatttctaagatggta 29266043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 38080598 - 38080683
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||| |||||||||||||||||| ||| | |||||||||| | | ||| | |||||||||||||||||||||||||||||| ||||    
T  38080598 gatggcctgacaatgtgtttataattgggg-caatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaattt 38080683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 42586529 - 42586440
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| |||||||||||| ||||| ||| | |||||||||| | | ||| |  ||||||||||||||||||||||||||||||||||||||    
T  42586529 gatggcctgacaatgtgtatataagtgggg-caatcctcacctcacaagccaattttgtggggttgtgttaggcccaaccacgatttctaa 42586440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 52650854 - 52650772
Alignment:
Q  176 gacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||| ||| | |||||||||| | | |||  ||||||||||||||||||||||||||||||  ||||||||    
T  52650854 gacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccataatttctaa 52650772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 39808457 - 39808541
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacga 251  Q
    |||||||||||||||||||||||||| ||| ||||||||||||     ||  ||||||||||||| ||||||||||||||||||||    
T  39808457 gtgatggtctgacaatgtgtttataagtggggacaatcctcac-ccccaaaccggttttgtggggctgtgttaggcccaaccacga 39808541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 51590037 - 51590124
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||||||||| ||||||||| || || |||||||||| | | ||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  51590037 gtctgacaatttgtttataagtg-ag-caatcctcacctcacaagccggttttgtgggattgtgttaggcccaagcacgatttctaatat 51590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 11924912 - 11925000
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||||||||||||||| ||||||||| ||| |  | | ||||| ||| ||  |||||||||| ||||||||||||||||||||||||||    
T  11924912 gtgatggtctgacaatatgtttataagtgggggtatttctcaccttacaaaccggttttgtgaggttgtgttaggcccaaccacgattt 11925000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 15986418 - 15986334
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| | |||||||||| | | |||  ||| |||||||||||||||||| |||||||| ||||||||    
T  15986418 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggtattgtggggttgtgttaggtccaaccaccatttctaa 15986334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 338
Target Start/End: Original strand, 5109255 - 5109413
Alignment:
Q  179 aatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcc 278  Q
    ||||| |||||||||| ||| |||| |||| | | |||| | ||||||||| |||||||||| ||||  || |||| ||| ||||||  ||||  |||||    
T  5109255 aatgtatttataaatg-agataatcttcacctcacaagttgtttttgtgggattgtgttaggtccaattacaatttttaagatggtatcagagtctctcc 5109353  T
Q  279 aagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatc 338  Q
    ||||| | ||| | ||||| |||||||||||||  ||||||| ||||||| |||||||||    
T  5109354 aagattcgttgagccaccttctatcaggtttccattatcgggtcacccaccatttatatc 5109413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 337
Target Start/End: Complemental strand, 5953777 - 5953658
Alignment:
Q  219 ggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    ||||| ||| |||||| |||||||||||| | |||| ||| ||||||  ||||| || |||||||||| || || |||||||| ||||||||||  ||||    
T  5953777 ggtttagtgaggttgtattaggcccaacctcaatttttaagatggtatcagagcctcatccaagatccgttaggccacctgctttcaggtttccattatc 5953678  T
Q  318 gggccacccacaatttatat 337  Q
    ||||||||||  ||||||||    
T  5953677 gggccacccaacatttatat 5953658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 28408131 - 28408038
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgt---gttaggcccaaccacgatttctaata 260  Q
    |||||||||||| ||||||||| ||| ||||||||| || | | ||| |||||||||||||||||   | ||||||||||||||||||| ||||    
T  28408131 tggtctgacaatttgtttataagtggggacaatccttacctcacaagccggttttgtggggttgttaggctaggcccaaccacgatttcaaata 28408038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 31432290 - 31432231
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| | | ||| |||||||||||||||||| ||||||||||||||||||||||    
T  31432290 caatcctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaa 31432231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 4098250 - 4098164
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||||||||| ||| | |||||||| ||| | ||  |||||||||| | ||||||||||||||||||| ||||||||    
T  4098250 gtctgacgatgtgtttataagtgggggcaatcctctcttcacaaaccggttttgtgtgattgtgttaggcccaaccacaatttctaa 4098164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 12245051 - 12244962
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    ||||||| |||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||| |||| |||||||| |||||    
T  12245051 tggtctggcaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggtccaa-cacgatttttaata 12244962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 12325599 - 12325494
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcc-aagatccattgggtcacctgctatcaggtttccgctatcg 318  Q
    |||||||||||||| |||||| ||||| ||  ||||||| |||||| |||||||||    ||||||||||||| |||||||||||||| ||| | |||||    
T  12325599 gttttgtggggttgagttaggtccaacgacagtttctaacatggtattagagcatccgttaagatccattgggccacctgctatcagg-ttctgttatcg 12325501  T
Q  319 ggccacc 325  Q
    |||||||    
T  12325500 ggccacc 12325494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 855975 - 856064
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||||||||  ||| |||||||||||| | | |||  ||||||||| | |||||||||||||||| ||| |||||||    
T  855975 atggcctgacaatgtgtttatacgtggggacaatcctcacctcacaagctggttttgtgagattgtgttaggcccaactacgttttctaa 856064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 11524882 - 11524943
Alignment:
Q  295 cctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||||  ||||||| ||||    
T  11524882 cctgctatcaggttttcgctatctggccacccactatttatatccacgcaccaagtctaata 11524943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 11525097 - 11525158
Alignment:
Q  295 cctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||||  ||||||| ||||    
T  11525097 cctgctatcaggttttcgctatctggccacccactatttatatccacgcaccaagtctaata 11525158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 26603421 - 26603510
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    |||||||||||||| ||||||||||  |  ||||||||||| | ||||| ||||||||||||||| | ||||||| ||  ||||||||||    
T  26603421 gatggtctgacaatatgtttataaaatggtacaatcctcacctcataagccggttttgtggggttatattaggccaaaatacgatttcta 26603510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 35892284 - 35892381
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||| ||||||| ||| | |||| ||||| | | ||  ||||||||||||||| |||||||| ||||||  |||||||| ||||||    
T  35892284 gatggtctgacaatgtatttataagtgggggcaatactcacctcacaacccggttttgtggggttctgttaggctcaaccataatttctaagatggta 35892381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 41035917 - 41035828
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||| |||| ||||||||| ||| | |||||||||| | | ||| |||||||||||| |||||||||| ||||| |||||||||||    
T  41035917 atggcctgccaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaa 41035828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 43409801 - 43409889
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||| ||||||| ||| | |||| ||||| | | ||| |||||||| |||||||||||| | |||||||||||||||||    
T  43409801 atggtctgacaatgtatttataagtgggg-caattctcacctcacaagccggttttggggggttgtgttatgtccaaccacgatttctaa 43409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 26865443 - 26865359
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| ||||||| ||| | |||||| ||| | | ||| ||||||||||||||||| |||||| ||||||| ||||||||    
T  26865443 ctgacaatgtatttataagtgggggcaatccccacctcacaagccggttttgtggggttgtattaggctcaaccacaatttctaa 26865359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 32952066 - 32952150
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||| ||||||||||||||||| ||||| |||||||  | | | ||||||||||| | ||||||||||||| |||||||| ||||    
T  32952066 tggtttgacaatgtgtttataagtggagccaatccttccctcacaagtcggtttttttgggttgtgttaggtccaaccactattt 32952150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 52127766 - 52127806
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  52127766 ttttgtggggttgtgttaggtccaaccacgatttctaatat 52127806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 32783298 - 32783223
Alignment:
Q  242 ccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    ||||||||||||||||| ||||||  ||||  ||| ||||||||||||   |||||||||||||||||| ||||||    
T  32783298 ccaaccacgatttctaagatggtatcagagtctcttcaagatccattgtaccacctgctatcaggtttctgctatc 32783223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 34264798 - 34264711
Alignment:
Q  171 ggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||| ||| || ||||| ||  | | ||||| ||||||| | |||||| |||| |||||||||||||||||    
T  34264798 ggtctgacaatgtgtttataagtggggataatccacatctcacaagtcagttttgtagagttgtgctaggtccaaccacgatttctaa 34264711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 52676549 - 52676405
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tccaagatccattgggtcacctgctatcaggtttccgctat 316  Q
    ||||||||||||||||||||| | |||||||| | |||||| ||||| |  |||| |  | |||||||||  ||| ||||| ||||||| ||||||| ||    
T  52676549 cggttttgtggggttgtgttatgtccaaccacaaattctaagatggtca--gagcctggttcaagatccaccgggccacctactatcagatttccgcaat 52676452  T
Q  317 cgggccacccacaatttatatccacgagccaagtccaatactgatga 363  Q
    | |||||||||  |||||||||||||  ||||  |||||| ||||||    
T  52676451 caggccacccatcatttatatccacgcaccaaacccaatagtgatga 52676405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 21626430 - 21626340
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||| |||||||| ||||||||| ||| | | |||||||||| | ||  ||||||||||||| ||| ||||||||||||||  |||||||    
T  21626430 gatggcctgacaatatgtttataagtgggggccatcctcacttcaaaatccggttttgtggggctgttttaggcccaaccacagtttctaa 21626340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 349
Target Start/End: Original strand, 26229573 - 26229740
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcca 279  Q
    |||||||||||| || || |||||||||| | ||||||||| ||| | ||||||||||||| |||||||  |||  ||| || | |  ||||  ||||||    
T  26229573 atgtgtttataagtgaaggcaatcctcacctcataagtcggatttttagggttgtgttaggtccaaccaaaatt--taagatagcatcagagtctctcca 26229670  T
Q  280 agatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
     ||||||||| | ||| || ||||||| || |||||||  | ||||||| |||||| ||||||| |||||    
T  26229671 tgatccattgagccacttgttatcaggatttcgctatcaagtcacccaccatttatgtccacgaaccaag 26229740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 31181592 - 31181514
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||| | |||||||||| | | |||  |||||| |||||||||||||||||||||||| | ||||||    
T  31181592 atgtgtttataagtgggggcaatcctcacctcacaagctggttttatggggttgtgttaggcccaaccacaaattctaa 31181514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 42351939 - 42351861
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||||| | |||||||| | | ||| | ||||||||| |||||||| |||||||||| |||||||||    
T  42351939 atgtgtttataagtggaggccatcctcacctcacaagccagttttgtggtgttgtgttgggcccaaccatgatttctaa 42351861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 42819293 - 42819379
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||||||||||||||||||||||| ||  ||||||| |||| | |||| ||||||| |   || ||||||||||||||||| |||||    
T  42819293 gatggtctgacaatgtgtttataagtgacgacaatcatcacctcataaatcggtttagctagggtgtgttaggcccaaccatgattt 42819379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 52907389 - 52907467
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||| | |||||||||| | | |||  |||||||||||||||||| || |||||||||||| |||||    
T  52907389 atgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgtaagacccaaccacgatatctaa 52907467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 356
Target Start/End: Original strand, 17412408 - 17412513
Alignment:
Q  251 atttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagt 350  Q
    ||||| || |||||| |||||| ||| ||||||||||| | |||| ||||||||| ||| || ||||| ||||||||  |||||| |||||||  ||||     
T  17412408 atttccaacatggtattagagcctcttcaagatccattagatcacttgctatcagattttcgttatcgagccacccatcatttatgtccacgaatcaagc 17412507  T
Q  351 ccaata 356  Q
    ||||||    
T  17412508 ccaata 17412513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 39100396 - 39100514
Alignment:
Q  217 tcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctat 316  Q
    ||||||||||||| || ||||||| || ||||| |||||||| ||||||        ||| ||| ||||||||||||| ||||||||||||||    |||    
T  39100396 tcggttttgtgggattttgttaggtccgaccaccatttctaaaatggta--------tcttcaatatccattgggtcatctgctatcaggtttttattat 39100487  T
Q  317 cgggccacccacaatttatatccacga 343  Q
    |||| ||||||| |||||| |||||||    
T  39100488 cgggtcacccactatttatgtccacga 39100514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 51459787 - 51459706
Alignment:
Q  177 acaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||| ||| | |||||| ||  ||| |||  ||||||||||| |||| |||||||||||||| ||||||||    
T  51459787 acaatgtgtttataagtgggggcaatccgcatcttacaagctggttttgtgggattgtattaggcccaaccacaatttctaa 51459706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 12509695 - 12509647
Alignment:
Q  276 tccaagatccattgggtcacctgctatcaggtttccgctatcgggccac 324  Q
    |||||||| | | ||||||||||||||||||||||||||| ||||||||    
T  12509695 tccaagattcgtagggtcacctgctatcaggtttccgctagcgggccac 12509647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 20208262 - 20208230
Alignment:
Q  226 tggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||||||||    
T  20208262 tggggttgtgttaggcccaaccacgatttctaa 20208230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 22377571 - 22377615
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||    
T  22377571 aagtcggttttgtgcggttatgttagtcccaaccacgatttctaa 22377615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 29898955 - 29898995
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  29898955 cggttttgtgaggttgtgctaggcccaaccacgatttctaa 29898995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 34264683 - 34264631
Alignment:
Q  297 tgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    |||||||||||||||||||||||| || |||| ||||||||| |||| |||||    
T  34264683 tgctatcaggtttccgctatcgggtcaaccaccatttatatcgacgaaccaag 34264631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 40189030 - 40188986
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||    
T  40189030 aagtcggttttgtggggttgtgtcaggcccaaccacaaattctaa 40188986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 4112624 - 4112541
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||| | | | ||||| |||| | | ||| || |||| |||| ||||||||||| ||||||||||||||||    
T  4112624 tgacaatgtgtttataagtaggggcaatcatcacctcacaagccgattttatgggattgtgttaggcacaaccacgatttctaa 4112541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 9632100 - 9632151
Alignment:
Q  287 ttgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatc 338  Q
    ||||||||| ||||||||| |||||||||||  ||||||||| |||||||||    
T  9632100 ttgggtcacatgctatcagttttccgctatctagccacccaccatttatatc 9632151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 11525040 - 11525087
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||| |||||||||||||||| |||| |||||||| ||||||    
T  11525040 cggttttgtgaggttgtgttaggcccatccacaatttctaagatggta 11525087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 40524866 - 40524791
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacga 343  Q
    ||||| ||| ||||||||||||| ||| ||||||||| |||| ||||||| | ||||||||  ||||| |||||||    
T  40524866 agagcctcttcaagatccattggttcatctgctatcaagttttcgctatcagaccacccaccgtttatgtccacga 40524791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 2120123 - 2120160
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  2120123 ttttgtggggttgtgttaggtccaatcacgatttctaa 2120160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 7374036 - 7374077
Alignment:
Q  308 ttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||    
T  7374036 ttccgctatcgagccacccaccatttatatccacgcgccaag 7374077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 7653522 - 7653559
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  7653522 ttttgtgggattgtgttaggcccaaccacaatttctaa 7653559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 7826122 - 7826085
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcct 205  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  7826122 gatggtctgacaatgtgtttataagtggggacaatcct 7826085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 10295424 - 10295473
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaataga 270  Q
    |||||| ||| |||||||| |||||||||||||||||| |||||| ||||    
T  10295424 ttttgtaggggtgtgttagtcccaaccacgatttctaacatggtattaga 10295473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 11524827 - 11524872
Alignment:
Q  220 gttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| |||||||||||||||| |||| |||||||| ||||||    
T  11524827 gttttgtgaggttgtgttaggcccatccacaatttctaagatggta 11524872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 11925091 - 11925128
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  11925091 ttttgtggagttgtgttaggctcaaccacgatttctaa 11925128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 40524742 - 40524654
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtgg--ggttgtgttaggcccaaccacgattt 254  Q
    |||||||||||| ||||||||||| ||| | ||||| |||| | |||| |||| |||||||  ||||||  |||||| |||||||||||    
T  40524742 gatggtctgacagtgtgtttataagtgggggcaatcttcacctcataaatcggctttgtgggaggttgtagtaggcctaaccacgattt 40524654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 9499288 - 9499328
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||| | | ||||||||||||||||    
T  9499288 cggttttgtggggttgtgttcgactcaaccacgatttctaa 9499328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 38676030 - 38675998
Alignment:
Q  196 agacaatcctcactttataagtcggttttgtgg 228  Q
    |||||||| ||||||||||||||||||||||||    
T  38676030 agacaatcttcactttataagtcggttttgtgg 38675998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 38739668 - 38739708
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||| |||||||||||| |||| |||||||||||    
T  38739668 cggttttgtggtgttgtgttaggctcaactacgatttctaa 38739708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 8e-49; HSPs: 94)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 174 - 356
Target Start/End: Complemental strand, 20327934 - 20327752
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||||||||||||||  || ||     
T  20327934 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagtgcc 20327835  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| || ||||| ||||||    
T  20327834 tctctaaaatccattgggccacctgctatcaggtttccgctatcgggccacccaccatttatgtccaggaaccaagcccaata 20327752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 166 - 356
Target Start/End: Complemental strand, 35038521 - 35038332
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||| |||||||||||||||||| ||| | |||||||||| | | |||  ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  35038521 gtgatggcctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaagatggta 35038422  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
      || || |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||| ||||||| ||||| ||||||    
T  35038421 tcagtgcctctccaagatccattgggccacctgcaatcaggtttccgctatc-ggccacccaccatttatgtccacgaaccaagcccaata 35038332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 356
Target Start/End: Original strand, 4155331 - 4155505
Alignment:
Q  182 gtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaag 281  Q
    |||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||  ||||||||    
T  4155331 gtgtttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctctccaag 4155430  T
Q  282 atccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    || ||||||| ||||||||||||||||||||||||||||||||||||  ||||| || |||| ||||| ||||||    
T  4155431 attcattgggccacctgctatcaggtttccgctatcgggccacccaccgtttatgtcgacgaaccaagcccaata 4155505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 169 - 362
Target Start/End: Original strand, 16239585 - 16239779
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| | ||| |||||| | | ||| |||||||||||| |||||||||||||||||||||||||||| ||||||  |    
T  16239585 atggcctgacaatgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaagatggtatca 16239684  T
Q  269 gagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaatactgatg 362  Q
    |||| | ||||||||||| || || |||||||||||||||||||| ||||| ||||||||| |||||| ||||||| |||||  ||||| |||||    
T  16239685 gagcctcctccaagatccgtttggccacctgctatcaggtttccgttatcgagccacccaccatttatgtccacgaaccaagctcaatagtgatg 16239779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 218 - 356
Target Start/End: Complemental strand, 20303426 - 20303288
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||  ||||| |||| || |||||||||| ||||||||||||||||||| |||||    
T  20303426 cggttttgtggggttgtgttaggtccaaccacaatttctaatatggtatcagagcctctctaaaatccattgggccacctgctatcaggtttccactatc 20303327  T
Q  318 gggccacccacaatttatatccacgagccaagtccaata 356  Q
    || |||||||| |||||| ||||||| ||||||||||||    
T  20303326 ggtccacccaccatttatgtccacgaaccaagtccaata 20303288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 169 - 315
Target Start/End: Original strand, 54567886 - 54568032
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| |  ||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  54567886 atggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 54567985  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgcta 315  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||    
T  54567986 gagcctctccaagatccattgagccacctgctatcaggtttccgcta 54568032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 341
Target Start/End: Original strand, 45828043 - 45828185
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctg 298  Q
    |||||||||| | | ||| |||||||||| ||||||||||||||| ||||| |||||||| ||||||  ||||| |||||||||||||||| | ||||||    
T  45828043 caatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaagatggtatcagagcctctccaagatccattgcgccacctg 45828142  T
Q  299 ctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    ||| |||||||||||||||| ||||||||| |||||| |||||    
T  45828143 ctaccaggtttccgctatcgagccacccaccatttatgtccac 45828185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 180 - 356
Target Start/End: Complemental strand, 13575000 - 13574823
Alignment:
Q  180 atgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctcc- 278  Q
    |||||||||||| ||| |  ||||||||| | | ||| | |||||||||||||||||||||||||||||| |||||||||||||||  | ||| ||        
T  13575000 atgtgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagcctcagtt 13574901  T
Q  279 aagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||| |||||| ||||||| ||||| ||||||    
T  13574900 aagatccattgggccacctgctatcaggtttccgctatcgtgtcacccaccatttatgtccacgaaccaagcccaata 13574823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 1723161 - 1723009
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||||     
T  1723161 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcc 1723062  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| || |||   ||||| |||||| ||||||||||||| |||||||||||||    
T  1723061 tcttcacgattgtttgggccacctgttatcaggtttccgttatcgggccaccc 1723009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 174 - 325
Target Start/End: Original strand, 11589784 - 11589935
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||     
T  11589784 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcc 11589883  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacc 325  Q
    ||| || ||| | ||||| |||||| ||||||||||||| ||| ||| ||||    
T  11589884 tcttcacgattctttgggccacctgttatcaggtttccgttattgggtcacc 11589935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 325
Target Start/End: Complemental strand, 12930213 - 12930061
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    ||||||||||||| |||  ||| |||||| ||||||| | ||| |||||||||||||||||||||||||||||||| |||||||| ||||||  | |||     
T  12930213 ctgacaatgtgttcatatgtggggacaattctcacttcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcaaagcc 12930114  T
Q  274 t-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacc 325  Q
    | ||||| ||||| ||||| |||||||||||||||||| | |||| |||||||    
T  12930113 tcctccatgatccgttgggccacctgctatcaggtttctgttatcaggccacc 12930061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 307
Target Start/End: Complemental strand, 16927039 - 16926901
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||||||||||||| ||| |  ||||||||  | | ||| ||||||||||||||||||||| || |||||||||||||||| ||||||  |    
T  16927039 atggcctgacaatgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagctcaaccacgatttctaagatggtatca 16926940  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggt 307  Q
    |||  ||| ||||||||||||||||||||| ||||||||    
T  16926939 gagtctcttcaagatccattgggtcacctgttatcaggt 16926901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 349
Target Start/End: Complemental strand, 8142738 - 8142557
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    |||| ||||||||| ||||||||||| | |  ||| ||| | ||| || |||||||||||||||||||||||| | ||||||||||||||| ||||||      
T  8142738 gatgatctgacaatatgtttataaataggggtaattctcgccttacaaatcggttttgtggggttgtgttaggtctaaccacgatttctaagatggtatc 8142639  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||| |||  || ||||||| ||||| |||||||||| ||||| | ||| | |||||||| |||||| ||||||| |||||    
T  8142638 agagcctctttaaaatccattaggtcatctgctatcagatttcctcaatcagaccacccaccatttatgtccacgaaccaag 8142557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 54368509 - 54368637
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    ||||| |||| ||||||||||||| ||| | |||||||||| | | ||| ||||||| |||||||||||||| |||||||||||||||||| ||||||      
T  54368509 gatggcctgaaaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaagatggtatc 54368608  T
Q  268 agagcatctccaagatccattgggtcacc 296  Q
    ||||| ||| |||||||||||||| ||||    
T  54368609 agagcctcttcaagatccattgggccacc 54368637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 22729093 - 22729216
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    ||||||||||||||||||||| || ||| | |||||||||||| | ||| |||||||||| ||||||||||||||||||||| |||||||| ||||||      
T  22729093 gatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaagatggtatc 22729192  T
Q  268 agagcatctccaagatccattggg 291  Q
    ||| | | ||||||||||| ||||    
T  22729193 agatcctatccaagatccactggg 22729216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 319
Target Start/End: Original strand, 49629604 - 49629749
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||| ||||||||||||| ||| | |||||| ||| | | ||  |||||||||||||||||||||| |||||  || |||| ||| |||||| ||||||     
T  49629604 ctgaaaatgtgtttataagtggcggcaatccccacctcacaaaccggttttgtggggttgtgttagacccaattaccatttttaaaatggtattagagcc 49629703  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgg 319  Q
    ||| |||||||||||||  |||||||||||||||||| ||||||||    
T  49629704 tcttcaagatccattggaccacctgctatcaggtttctgctatcgg 49629749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 20303276 - 20303204
Alignment:
Q  282 atccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaa 354  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||    
T  20303276 atccattgggtcacctgctatcaggtttccgctatcggtccacccaccatttatgtccacgaaccaagtccaa 20303204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 35038287 - 35038195
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| |||||||||||||||||| ||| |  ||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  35038287 gtgatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 35038195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 46139347 - 46139443
Alignment:
Q  260 atggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||| |||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||| | ||||| ||||||    
T  46139347 atggtattagatcctctccaagatccattgggtcacctgctatcaggtttctgctatcgggccacccaccatttatgttcacaaaccaagcccaata 46139443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 356
Target Start/End: Complemental strand, 26272362 - 26272227
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| ||  | ||||||| ||| |||||||||| || ||||| ||||||||| |||||||      
T  26272362 ttttgtggggttgtgttagacccaaccacaatttctaagatgatatcaaagcatcttcaatatccattgggccatctgctttcaggtttctgctatcgtt 26272263  T
Q  321 ccacccacaatttatatccacgagccaagtccaata 356  Q
    | |||||| ||||||  |||||| ||||||||||||    
T  26272262 caacccaccatttatgcccacgaaccaagtccaata 26272227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 4155558 - 4155642
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| |||||||||||| | | ||| ||||||| | |||||||||||||||||||||||||||||||    
T  4155558 ctgacaatgtgtttataagtggggacaatcctcacctcaaaagccggttttttagggttgtgttaggcccaaccacgatttctaa 4155642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 43781582 - 43781666
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||| |||||||| ||||| |||||||||||| | ||||||||||||| | |||||||||||||||||||| ||||||||    
T  43781582 ctgacaatgagtttataagtggaggcaatcctcacttcacaagtcggttttgtagagttgtgttaggcccaaccacaatttctaa 43781666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 34992705 - 34992787
Alignment:
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| ||||||| ||||| ||||||    
T  34992705 tctccaaggtccattgggccacctgctatcaggtttccgctgtcgggtcacccaccatttatgtccacgaaccaagcccaata 34992787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 20327704 - 20327619
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||| |||||||||| ||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||    
T  20327704 atggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 20327619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 50052599 - 50052538
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata 260  Q
    |||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  50052599 caatcctcacttcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 50052538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 348
Target Start/End: Original strand, 31317232 - 31317404
Alignment:
Q  178 caatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaata---tggtaatagagcat 274  Q
    |||||||||||||| ||| | |||||||||| | | ||| |||||||||||| ||||||||||| |||||||||||||||| |   |||||  ||||  |    
T  31317232 caatgtgtttataagtgggg-caatcctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaagatggtggtatcagagtct 31317330  T
Q  275 c-tccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    | |||||||||| ||||  ||||| |||||||||||  | ||||||||||||||| |||||| ||||||| ||||    
T  31317331 cttccaagatccgttggaccacctactatcaggttt-tgttatcgggccacccaccatttatgtccacgaaccaa 31317404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 355
Target Start/End: Complemental strand, 50052800 - 50052677
Alignment:
Q  231 ttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaa 330  Q
    ||||||||||||||||||| ||||||||||| |||  ||||| |||| |||||||| |||| |||||||||||||||||| ||| ||||| || || | |    
T  50052800 ttgtgttaggcccaaccactatttctaatattgtatcagagcctctctaagatcca-tgggccacctgctatcaggtttctgctgtcgggtcatccgcca 50052702  T
Q  331 tttatatccacgagccaagtccaat 355  Q
    | ||||||||||  ||||| |||||    
T  50052701 tctatatccacgcaccaagcccaat 50052677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 28087256 - 28087149
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatc 317  Q
    |||||||||||| |||||| || ||||| |||||||||||| ||||||  ||||| ||| || ||| | ||||| |||||| ||||||||||||| ||||    
T  28087256 cggttttgtgggattgtgtcagacccaatcacgatttctaagatggtaccagagcctcttcacgattctttgggccacctgttatcaggtttccgttatc 28087157  T
Q  318 gggccacc 325  Q
    ||||||||    
T  28087156 gggccacc 28087149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 204 - 326
Target Start/End: Complemental strand, 26753576 - 26753454
Alignment:
Q  204 ctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatc 303  Q
    ||||| |||||||| ||||||||||  |||| |||| |||||||||||||||||| ||  ||   |||||||| |||||| |||||| ||||||||||||    
T  26753576 ctcaccttataagttggttttgtggaattgtattagacccaaccacgatttctaagataatatccgagcatcttcaagattcattggatcacctgctatc 26753477  T
Q  304 aggtttccgctatcgggccaccc 326  Q
    ||| || | |||||||| |||||    
T  26753476 aggatttcactatcggggcaccc 26753454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 9273190 - 9273279
Alignment:
Q  170 tggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaat 259  Q
    |||||||||||| ||||||||| ||| | |||||||||||| | |||  ||||||||||||||||||||||| ||||||| |||| ||||    
T  9273190 tggtctgacaatttgtttataagtgggggcaatcctcacttcacaagctggttttgtggggttgtgttaggctcaaccaccatttttaat 9273279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 15019546 - 15019425
Alignment:
Q  229 ggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
    |||||||||| |  |||||||||||||||| |||||| |||||||| |||| |||| ||||||| ||||| ||||||| ||| |||||||||   |||||    
T  15019546 ggttgtgttatgttcaaccacgatttctaagatggtattagagcatcctccgagattcattgggccacctactatcagattttcgctatcggataaccca 15019447  T
Q  328 caatttatatccacgagccaag 349  Q
    | ||||| |||||||| |||||    
T  15019446 ccatttaaatccacgaaccaag 15019425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 17001508 - 17001415
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||||| ||| | ||||| |||| | ||||| || ||||||||||| |||||||| ||||||| ||||||||| ||||||    
T  17001508 gtctgacaatgtgtttataagtgggggcaatcatcacctcataaggcgattttgtggggtagtgttaggtccaaccatgatttctaaaatggta 17001415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 18757841 - 18757922
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttc 255  Q
    ||||| |||||||||||| ||| | | |||||||| | | ||| ||||||||||||||||||||||||||||||||||||||    
T  18757841 ctgactatgtgtttataagtgggggcgatcctcacatcacaaggcggttttgtggggttgtgttaggcccaaccacgatttc 18757922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 38791541 - 38791460
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccac 249  Q
    |||||||||||||||| ||||||| ||  |||||||||||| | | || ||| |||||||||||||||||||||||||||||    
T  38791541 gatggtctgacaatgtatttataagtgaggacaatcctcacctcacaaatcgattttgtggggttgtgttaggcccaaccac 38791460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 39683353 - 39683268
Alignment:
Q  174 ctgacaatgtgtttataaa-tggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||| ||||| |||||||||| | | ||| |||||||||||| |||| |||||| ||||||||||||||||    
T  39683353 ctgacaatgtgtttataaagtggaggcaatcctcacctcacaagacggttttgtgggattgtattaggctcaaccacgatttctaa 39683268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 45139062 - 45138965
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||| ||||||| ||||| |||| ||| | |||||||||| | | ||| ||||||||||||||||||| || |||||||||||||||||| ||||||    
T  45139062 gatggcctgacaacgtgttaataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaagatggta 45138965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 472144 - 472064
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttc 255  Q
    ||||||||||||||||| ||| | ||||||| || | | ||| ||||||||||||||||||||||||| ||||||||||||    
T  472144 tgacaatgtgtttataagtgggggcaatccttacctcacaagccggttttgtggggttgtgttaggccaaaccacgatttc 472064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 19954443 - 19954355
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| ||| |||||||||||||| || |||||||||||||| ||||||| | |||||||| |||||| ||||||| ||||| ||||||    
T  19954443 agagcctcttcaagatccattgggccatctgctatcaggttttcgctatctgaccacccaccatttatgtccacgaaccaagcccaata 19954355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 24866216 - 24866280
Alignment:
Q  194 ggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  24866216 ggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24866280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 27670477 - 27670326
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca 273  Q
    |||||||  ||||||||| ||| | |||||||||| | | | | |||||||||||||||||||||||||||||||| | |||||||||||||  |||||     
T  27670477 ctgacaaattgtttataagtgggggcaatcctcacctcaaaggccggttttgtggggttgtgttaggcccaaccacca-ttctaatatggtatcagagcc 27670379  T
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
    ||| |  | | | ||||  |||||| ||||||||||||| |||||| ||||||    
T  27670378 tcttcgcgtttctttggaccacctgttatcaggtttccgttatcggaccaccc 27670326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 39269325 - 39269421
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||||||||||||||||||| ||| | |||||||||| | | ||| |||||||| ||| |||||||||||| ||| ||||||| ||| ||||||    
T  39269325 atggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgagggattgtgttaggcctaactacgatttttaagatggta 39269421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 45138893 - 45138805
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttct 256  Q
    ||||||||| |||||||||||||| ||| | |||||||||| | | ||| ||||||||||||||||| | || ||||||||||||||||    
T  45138893 gatggtctggcaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtatgagacccaaccacgatttct 45138805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 6487418 - 6487331
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatat 261  Q
    |||||||| ||||||||| |||||  ||||||||| | | ||| ||||||| ||||||||| ||||||||||||||||||| ||||||    
T  6487418 ctgacaatttgtttataagtggaggtaatcctcacctcacaagccggttttatggggttgttttaggcccaaccacgatttttaatat 6487331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 9272960 - 9273051
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||| ||| ||||||||| ||| | ||| |||||| | | ||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  9272960 ctgataatttgtttataagtgggggcaaccctcacctcacaagccggttttgtggggttgtgttaagcccaaccaccatttctaatatggta 9273051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 17638234 - 17638324
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||| | |||||||||| | | |||  ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  17638234 ctgacaatttgtttataagtgggg-caatcctcacctcacaagctggttttgaggggttgtgttaggcccaaccacgatttctaagatggta 17638324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 31317466 - 31317549
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||| ||| || |||| |||| | | ||| || ||||| ||||||||||||||||||||||||||||||||    
T  31317466 tgacaatgtgtttataagtggggaaaatcatcacctcacaagccgattttgcggggttgtgttaggcccaaccacgatttctaa 31317549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 21809121 - 21809059
Alignment:
Q  278 caagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatcca 340  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||  |||||| ||||    
T  21809121 caagatccattgggtcacctgctatcaggtttccgctatcggactacccatcatttatgtcca 21809059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 22775615 - 22775553
Alignment:
Q  278 caagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatcca 340  Q
    ||||||| |||||| |||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  22775615 caagatctattgggccacctgctattaggtttctgctatcgggccacccaccatttatatcca 22775553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 27086578 - 27086682
Alignment:
Q  166 gtgatggtctgacaatgtgtttat---aaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatg 262  Q
    ||||||| ||||||||||||||||   || ||   ||||||||||  ||| |||| |||||||||| ||||||||||||||||||| ||||||||| |||    
T  27086578 gtgatggcctgacaatgtgtttattataagtgagtacaatcctcatcttacaagttggttttgtggagttgtgttaggcccaaccatgatttctaagatg 27086677  T
Q  263 gtaat 267  Q
    |||||    
T  27086678 gtaat 27086682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 50083175 - 50083081
Alignment:
Q  165 agtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtgggg-ttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| | |||||||||||||||| ||| |  ||||||||| | | ||| ||||||||||||| |||||||||||||||||| |||||||||    
T  50083175 agtgatggcccgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgggggttgtgttaggcccaaccatgatttctaa 50083081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 34610559 - 34610644
Alignment:
Q  174 ctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||| ||||||||| ||| |  |||||||||| | | |||||||||||||||||||||||||| ||||||||| ||||||||    
T  34610559 ctgacaatatgtttataagtggggggcaatcctcacctcacaagtcggttttgtggggttgtgttagacccaaccacaatttctaa 34610644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 8018967 - 8019051
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||| ||||||||| |||   |||||||||| | | ||| |||||||||||||||||||||||||||||||| ||||||||    
T  8018967 ctgaaaatttgtttataagtgggtgcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 8019051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 32215580 - 32215520
Alignment:
Q  194 ggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||||| |||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||    
T  32215580 ggagaccatcctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgattt 32215520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 39620325 - 39620409
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| |  || || ||| | ||||| | ||||||||||||||||||| |||||||||||||||||||    
T  39620325 ctgacaatgtgtttataagtgggggtaacccgcacctcataagccagttttgtggggttgtgttaagcccaaccacgatttctaa 39620409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 47702474 - 47702410
Alignment:
Q  194 ggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||  ||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  47702474 ggaggcaatcctcatcttacaagctggttttgtggggttgtgttaggcccaaccacgatttctaa 47702410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 268 - 340
Target Start/End: Complemental strand, 52724212 - 52724140
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatcca 340  Q
    ||||| ||| ||| || ||||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||    
T  52724212 agagcctcttcaacattcattgggtcacatgctatcaggttttcgctatcgggccacccaccatttatgtcca 52724140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 11659711 - 11659600
Alignment:
Q  230 gttgtgttaggcccaaccacgatttctaatatggtaatagagcatc-tccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccac 328  Q
    |||| ||||| | |||||||||| ||||| || ||| |||||| || |||||||||| ||||   |||||||||||||||| ||||||||| ||||||||    
T  11659711 gttgagttagactcaaccacgatgtctaagatcgtattagagcctcctccaagatccgttggacaacctgctatcaggttttcgctatcggaccacccac 11659612  T
Q  329 aatttatatcca 340  Q
     |||||| ||||    
T  11659611 catttatgtcca 11659600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 13574725 - 13574686
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13574725 cggttttgtggggttgtgttaggcccaaccacgatttcta 13574686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 13741193 - 13741106
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaa-tcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||||| ||||||||||||||||| ||| ||||| ||||||| | | ||| ||||||| |||||||||||||| ||||||||| ||||    
T  13741193 gatggtttgacaatgtgtttataagtggggacaaatcctcacctcacaagccggttttttggggttgtgttagacccaaccacaattt 13741106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 21888525 - 21888571
Alignment:
Q  295 cctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  21888525 cctgctatcaggtttccgctatcggaccacccaccatttatatccac 21888571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 39269173 - 39269247
Alignment:
Q  274 tctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||||| ||||||||||| |||||||||||||||  ||| |||||| |||||||| |||||| ||||||| ||||    
T  39269173 tctccatgatccattgggccacctgctatcaggtggccgttatcggaccacccaccatttatgtccacgaaccaa 39269247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 16239821 - 16239910
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||| ||||||||| ||| | |||  ||||| | | ||||||||||||||||||||||||||| |||| ||| ||||||||    
T  16239821 atggcctgacaatatgtttataagtgggggcaaatctcacctcacaagtcggttttgtggggttgtgttaggtccaagcacaatttctaa 16239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 20303154 - 20303069
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    |||| |||||||||| ||||||| ||| | |||||||||| | | ||  |||||||||||| ||||||||||| ||||||||||||    
T  20303154 atggcctgacaatgtatttataagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgttaggctcaaccacgattt 20303069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 349
Target Start/End: Original strand, 24866136 - 24866216
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
    ||||| ||| |||||| ||||||| |||||||||||||||||||| |||  ||||||| || |||||| |||||||||||||    
T  24866136 agagcctcttcaagattcattgggccacctgctatcaggtttccgttat-tggccacctaccatttatgtccacgagccaag 24866216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 35018535 - 35018616
Alignment:
Q  235 gttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctat 316  Q
    ||||||||||||||| | |||||| ||| ||  ||||| | |||||||||| ||||||||| |||||| |||||||||||||    
T  35018535 gttaggcccaaccacaaattctaagatgatatcagagcctatccaagatccgttgggtcacttgctataaggtttccgctat 35018616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 1353491 - 1353531
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  1353491 cggttttgtggggttgtgttaggcccaaccacgattcctaa 1353531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 8142491 - 8142409
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| | ||||||||| ||| |||||||||| | | ||| |||||||||| |||||||| |||||||| ||||||||||||    
T  8142491 tgacaatatatttataaatagaggcaatcctcacctcacaagccggttttgtgaggttgtgt-aggcccaatcacgatttctaa 8142409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 14839829 - 14839738
Alignment:
Q  167 tgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||| ||||| ||||||| | | | |||||||||| ||| |||||||||||||  ||||||||||| | |||||||  |||||||    
T  14839829 tgatggtctgataatgtatttataagttggggcaatcctcacgttacaagtcggttttgtatggttgtgttagactcaaccacattttctaa 14839738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 265
Target Start/End: Original strand, 21833399 - 21833438
Alignment:
Q  226 tggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  21833399 tggggttgtgttaggcccaaccacgatttctaacatggta 21833438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 30179793 - 30179702
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||||||||||||| ||| |  ||||||||| | | ||||| ||||||| || || ||||| ||||||||||||||| ||| ||||||    
T  30179793 ctgacaatgtgtttataagtgggggtaatcctcacctcacaagtcagttttgtaggattatgttatgcccaaccacgatttataagatggta 30179702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 340
Target Start/End: Original strand, 33640088 - 33640211
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaagatccattgggtcacctgctatcaggtttccgctat 316  Q
    |||||||||||| ||||||||||||||| ||| |||||||| ||| ||  ||||| | |||||| |||| ||||  |||||| |||||  |||||| |||    
T  33640088 cggttttgtgggattgtgttaggcccaatcacaatttctaagatgatatcagagcctcctccaaaatccgttggaccacctgttatcatatttccgttat 33640187  T
Q  317 cgggccacccacaatttatatcca 340  Q
     || |||||||| |||||| ||||    
T  33640188 tggaccacccaccatttatgtcca 33640211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 356
Target Start/End: Complemental strand, 39683461 - 39683406
Alignment:
Q  301 atcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||| ||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  39683461 atcaggtttctgctatcgggccacccaccatttatgtccacgaaccaagcccaata 39683406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 45828290 - 45828329
Alignment:
Q  219 ggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  45828290 ggttttgtggggttgtgttaggcccaaccatgatttctaa 45828329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 1800067 - 1800145
Alignment:
Q  217 tcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaagatccattgggtca 294  Q
    ||||||||||| |||||| |||||||||||||| |||||||| ||||||  ||||| | || ||||||||||| |||||    
T  1800067 tcggttttgtgcggttgtattaggcccaaccacaatttctaagatggtatcagagcctccttcaagatccattaggtca 1800145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 356
Target Start/End: Original strand, 22729620 - 22729674
Alignment:
Q  302 tcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||||||||||||||||  |||||||||||||| ||||||| ||||| ||||||    
T  22729620 tcaggtttccgctatcggatcacccacaatttatgtccacgaaccaagcccaata 22729674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 33205489 - 33205547
Alignment:
Q  199 caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttcta 257  Q
    |||||||||| | | ||| | |||||| |||||||||||||||||||||||||||||||    
T  33205489 caatcctcacctcacaagccagttttgcggggttgtgttaggcccaaccacgatttcta 33205547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 1800208 - 1800289
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccac 249  Q
    |||||||||||| ||| ||||||| ||| | |||||||||| | | ||  ||||||||||||||||||| || |||||||||    
T  1800208 gatggtctgacagtgtatttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgtaagacccaaccac 1800289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 323
Target Start/End: Original strand, 30326916 - 30327055
Alignment:
Q  185 tttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagca--tctccaaga 282  Q
    ||||||| ||| | || ||||||| ||| ||| |||||||||| | ||  |||||||||||||  |||| |||| |||||| ||||||   | |||||||    
T  30326916 tttataattgggggcagtcctcaccttacaagccggttttgtgagtttaagttaggcccaacccagatt-ctaagatggtattagagcccgtgtccaaga 30327014  T
Q  283 tccattgggtcacctgctatcaggtttccgctatcgggcca 323  Q
    ||||||| | ||| |||||||||||  ||||||||||||||    
T  30327015 tccattgagccacgtgctatcaggtcaccgctatcgggcca 30327055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 334
Target Start/End: Original strand, 39620119 - 39620252
Alignment:
Q  202 tcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat-ctccaagatccattgggtcacctgct 300  Q
    ||||||||| | ||| ||||||||  | ||||||||| |  |||||||||||||||| ||||||  ||||| | ||||||||||  ||||| ||||||||    
T  39620119 tcctcacttcacaagccggttttgaagagttgtgttaagttcaaccacgatttctaagatggtatcagagcctcctccaagatctgttgggccacctgct 39620218  T
Q  301 atcaggtttccgctatcgggccacccacaattta 334  Q
    ||| | ||| || ||||| | ||||||| |||||    
T  39620219 atccgatttacgttatcgagtcacccaccattta 39620252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 21717394 - 21717350
Alignment:
Q  214 aagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||    
T  21717394 aagtcggttttgtgaggttgtgttcggcccaaccacaatttctaa 21717350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 29215905 - 29215758
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaat 267  Q
    ||||||| |||||||||||||||| ||| || ||||||||| | | | | | |||||||||||  |||||||| | ||||| ||||||||| ||| || |    
T  29215905 gatggtccgacaatgtgtttataagtggtgataatcctcacctcacatgccagttttgtgggg-cgtgttaggtctaaccatgatttctaagatgatatt 29215807  T
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctat 316  Q
    ||||| ||| ||| || |||| || |||||  |||||| |||| |||||    
T  29215806 agagcttcttcaaaattcattaggccacctcttatcagatttctgctat 29215758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 7697438 - 7697399
Alignment:
Q  219 ggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  7697438 ggttttgtggggttgtgttaggcctaaccacaatttctaa 7697399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 258
Target Start/End: Original strand, 27086693 - 27086724
Alignment:
Q  227 ggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||||||||||||    
T  27086693 ggggttgtgttaggcccaaccacgatttctaa 27086724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 31150944 - 31151006
Alignment:
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatat 337  Q
    ||||||||||| ||||| ||| |||||| ||||||||| ||||||| ||| ||| ||||||||    
T  31150944 ctccaagatccgttgggccacttgctattaggtttccgttatcgggtcactcaccatttatat 31151006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 340
Target Start/End: Complemental strand, 34659261 - 34659156
Alignment:
Q  234 tgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaattt 333  Q
    |||||||| |||| ||||||| ||| ||||||  ||||| ||| |||||||| ||||  ||| |||||| | |||||| ||||||| |||||||  ||||    
T  34659261 tgttaggctcaactacgattt-taagatggtatcagagcctcttcaagatccgttggaccacatgctattaagtttccactatcggaccacccatcattt 34659163  T
Q  334 atatcca 340  Q
    |||||||    
T  34659162 atatcca 34659156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 46794047 - 46794136
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||||||||| ||||| ||||| ||||   ||| ||| ||||| ||| ||||||||||    |||||||||||||||    
T  46794047 gatggtctgacaatgtgtttataagtggag-caatcatcaccccataggtcagttttatggagttgtgttagatataaccacgatttctaa 46794136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 2805355 - 2805428
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttagg 240  Q
    |||||||| ||||||||||||||| ||| |  |||| ||||| | |||||| ||||||||||| ||||||||||    
T  2805355 gatggtctaacaatgtgtttataagtggggggcaattctcacctcataagttggttttgtgggattgtgttagg 2805428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 15508865 - 15508930
Alignment:
Q  193 tggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||| ||||  | | |||||||||||||| ||| ||||||| |||| |||||||||||||    
T  15508865 tggagacaatgctcatatcagaagtcggttttgtgaggtcgtgttagacccatccacgatttctaa 15508930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 17001332 - 17001243
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| ||||||||||| |||||| |||   |||||||||||| ||||  |||||||||| | || ||||| ||||||||| | |||||||    
T  17001332 atggcctgacaatgtgattataagtgggagcaatcctcacttcataaaacggttttgtgagattatgttatgcccaaccatgctttctaa 17001243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 25417150 - 25417235
Alignment:
Q  277 ccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaatactgatg 362  Q
    ||||||| ||||||||||| |||||||| ||| ||| |||||| |||||||  |||||| |||| || ||||  |||||| |||||    
T  25417150 ccaagattcattgggtcacatgctatcaagttaccgttatcggaccacccatcatttatgtccaggaaccaaccccaataatgatg 25417235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 31556307 - 31556352
Alignment:
Q  182 gtgtttataaatggagacaatcctcactttataagtcggttttgtg 227  Q
    |||||||||||||| |||| || ||||||| |||||||||||||||    
T  31556307 gtgtttataaatggggacattcatcactttttaagtcggttttgtg 31556352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 3975443 - 3975359
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||||| ||| || |||| |||| |   ||| || ||||||||  ||||||||| ||||||||| ||||||||    
T  3975443 ctgacaatgtgtttataagtggggataatcatcacctctcaagccgattttgtggaattgtgttagacccaaccactatttctaa 3975359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 4008676 - 4008764
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||||| |||||||| ||||||||||||| |   ||| |||| |  |||| || ||||||| | ||||||||||||||||||| ||||    
T  4008676 gtgatggcctgacaatatgtttataaatgggggtgatcatcacctcttaagccgattttgtgagattgtgttaggcccaaccactattt 4008764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 44576296 - 44576256
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||| ||||||||  ||||||||||||||||||    
T  44576296 cggttttgtgggtttgtgttacacccaaccacgatttctaa 44576256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 84; Significance: 8e-40; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 169 - 356
Target Start/End: Original strand, 81836 - 82022
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaata 268  Q
    |||| |||||||| ||||||||| ||| ||||||  |||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  81836 atggcctgacaatatgtttataagtggggacaattttcaccttacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 81935  T
Q  269 gagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||| |||||||||||||||||   ||||| |||||||||||| | |||| ||||| ||| |||||| |||| || ||||| ||||||    
T  81936 gagcctctccaagatccattggactacctgttatcaggtttccac-atcgagccacgcaccatttatgtccatgaaccaagcccaata 82022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 82070 - 82159
Alignment:
Q  169 atggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||| |||||||||||| ||||||||| |  ||||||||  ||| ||  |||||||||||||||||||||||||||||||| ||||||||    
T  82070 atggcctgacaatgtgtatataaatgggggaaatcctcaaattacaaaccggttttgtggggttgtgttaggcccaaccacaatttctaa 82159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 167 - 327
Target Start/End: Original strand, 3836 - 3997
Alignment:
Q  167 tgatggtctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||| ||||||||||||| |||| ||| |  |||||||||| | | ||| | |||||||||||||||||||||| ||||||| |||||||||||||||    
T  3836 tgatggcctgacaatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggta 3935  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
      ||| | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  3936 tcagatcctctccaagatccactgggccacctgctatcaggtttccgctatcgggccaccca 3997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 167 - 327
Target Start/End: Original strand, 4480 - 4641
Alignment:
Q  167 tgatggtctgacaatgtgtttataaatggaga-caatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||| ||||||||||||| |||| ||| |  |||||||||| | | ||| | |||||||||||||||||||||| ||||||| |||||||||||||||    
T  4480 tgatggcctgacaatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggta 4579  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
      ||| | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  4580 tcagatcctctccaagatccactgggccacctgctatcaggtttccgctatcgggccaccca 4641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 5655 - 5798
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||||||||||| ||| |  ||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||||| ||||||  ||||| |    
T  5655 tgacaatgtgtttataagtgggggtaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagcct 5754  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcg 318  Q
    || ||| |||||||||| |||||||||||||||||||| |||||    
T  5755 cttcaaaatccattgggccacctgctatcaggtttccgttatcg 5798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 5890 - 5973
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||| ||||||||| ||  |||||||||||| ||  ||| || ||||||  |||||||||||| ||||| |||||||||||    
T  5890 tgacaatatgtttataagtgaggacaatcctcacctttcaagccgattttgttaggttgtgttaggtccaactacgatttctaa 5973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 326
Target Start/End: Original strand, 56457 - 56610
Alignment:
Q  173 tctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagc 272  Q
    ||||||||| ||||||||| ||  | ||||| |||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  56457 tctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 56556  T
Q  273 atctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccc 326  Q
     ||| ||  || | ||||| |||||| |||||||||| || |||||||||||||    
T  56557 ctcttcacaattctttgggccacctgttatcaggttttcgttatcgggccaccc 56610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 288748 - 288658
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||| ||||||  |||   |||||||||| | | |||  |||||||||| ||||||||||||||||||| |||||||||    
T  288748 gatggtctgacaatgtatttatatctgggcgcaatcctcacctcacaagctggttttgtggagttgtgttaggcccaaccatgatttctaa 288658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 166 - 349
Target Start/End: Original strand, 12638 - 12821
Alignment:
Q  166 gtgatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggta 265  Q
    |||||||| ||||||||| ||||||  ||| | |||||||||| | | |||||| ||||||| ||||||||||||||||||||| |||| ||| ||||||    
T  12638 gtgatggtttgacaatgtatttatatgtgggggcaatcctcacctcacaagtcgattttgtgtggttgtgttaggcccaaccacaatttttaagatggta 12737  T
Q  266 atagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaag 349  Q
     ||| |  ||||||||||  |||||| ||||| |||||||| || |||||||||  ||||||| |||||| | ||||| |||||    
T  12738 ttagcgtctctccaagataaattgggccacctactatcaggatttcgctatcggaacacccaccatttatgttcacgaaccaag 12821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 221 - 335
Target Start/End: Complemental strand, 41244 - 41130
Alignment:
Q  221 ttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcatctccaagatccattgggtcacctgctatcaggtttccgctatcggg 320  Q
    |||||||||||||| |||||| |||| ||||||||||| ||||||  ||||| |||||||||| ||||||| |||||||||||| |||| ||||||||      
T  41244 ttttgtggggttgtattaggctcaactacgatttctaagatggtatcagagcctctccaagattcattgggccacctgctatcaagtttgcgctatcgaa 41145  T
Q  321 ccacccacaatttat 335  Q
    |||||||| ||||||    
T  41144 ccacccactatttat 41130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 327
Target Start/End: Complemental strand, 3555 - 3403
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||| ||||||||| ||| ||||||| |||| | | ||| |||||||||||||||||||||| ||||| |||||||||||||||||||  ||||| |    
T  3555 tgacaatttgtttataagtggggacaatcttcacctcacaagccggttttgtggggttgtgttagacccaatcacgatttctaatatggtatcagagcct 3456  T
Q  275 ctccaagatccattgggtcacctgctatcaggtttccgctatcgggccaccca 327  Q
     | ||  || | |||||||||||| ||| ||||||||| ||||| | ||||||    
T  3455 tttcataattctttgggtcacctgttattaggtttccgttatcgagtcaccca 3403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 6271 - 6355
Alignment:
Q  172 gtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttct 256  Q
    |||||||||||||||||||| ||| | |||||||||| | | ||| || ||||||||||||||||||||||||||||||||||||    
T  6271 gtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttct 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 258
Target Start/End: Original strand, 6393 - 6422
Alignment:
Q  229 ggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||||||||||||||||    
T  6393 ggttgtgttaggcccaaccacgatttctaa 6422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 258
Target Start/End: Original strand, 20932 - 21022
Alignment:
Q  168 gatggtctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    |||||||||||||||| ||||||| || ||  ||||||||| | | ||| ||||||||||||||||||||| |||||||||||||||||||    
T  20932 gatggtctgacaatgtatttataagtgaaggtaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaa 21022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 4514 - 4426
Alignment:
Q  174 ctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatg 262  Q
    |||||||| ||||||||| ||| | |||||||||| | | ||| |||||||||||||||||||||||| |||||| |||||||| ||||    
T  4514 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccatgatttctactatg 4426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 51236 - 51352
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgatttctaatatggtaatagagcat 274  Q
    ||||||||||||||||| ||| | |||||||||| | | ||||| ||||||||||||||||||| || ||| ||| |||||||| ||||||  || || |    
T  51236 tgacaatgtgtttataagtgggggcaatcctcacctcacaagtcagttttgtggggttgtgttatgctcaatcacaatttctaagatggtatcagtgcct 51335  T
Q  275 ctccaagatccattggg 291  Q
    |||||| || |||||||    
T  51336 ctccaaaattcattggg 51352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 51366 - 51454
Alignment:
Q  268 agagcatctccaagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    ||||| |||||||||||||||||||| ||||||||||||||||  ||||||||||||| |  |||||| | ||||| ||||| ||||||    
T  51366 agagcttctccaagatccattgggtctcctgctatcaggtttctactatcgggccacctatcatttatgttcacgaaccaagcccaata 51454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 14503 - 14586
Alignment:
Q  274 tctccaagatccattgggtcacctgctatcaggtttccg-ctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||| ||||||| |||||| |||| || ||||| ||||||    
T  14503 tctccaagatccattggaccacctgctatcaggtttccgcctatcgggtcacccactatttatgtccatgaaccaagcccaata 14586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 10837 - 10920
Alignment:
Q  274 tctccaagatccattgggtcacctgctatcaggtttccg-ctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||||||  |||||||||||||||||||| |||| ||| ||||||| |||||| |||| || ||||| ||||||    
T  10837 tctccaagatccattggaccacctgctatcaggtttccgcctattgggtcacccactatttatgtccatgaaccaagcccaata 10920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 87783 - 87727
Alignment:
Q  285 cattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  87783 cattgggccacctgctatcaggtttccactatcgggtcacccaccatttatatccac 87727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 102343 - 102295
Alignment:
Q  293 cacctgctatcaggtttccgctatcgggccacccacaatttatatccac 341  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  102343 cacctgctatcaggtttccactatcgggtcacccaccatttatatccac 102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 347612 - 347572
Alignment:
Q  218 cggttttgtggggttgtgttaggcccaaccacgatttctaa 258  Q
    ||||||||||||||||| ||||||||||| |||| ||||||    
T  347612 cggttttgtggggttgtattaggcccaactacgaattctaa 347572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 13196 - 13279
Alignment:
Q  274 tctccaagatccattgggtcacctgctatcaggtttccg-ctatcgggccacccacaatttatatccacgagccaagtccaata 356  Q
    |||||||||||||||||  |||||||||||||||||||| |||| ||| ||||||| |||||| |||| || ||||| ||||||    
T  13196 tctccaagatccattggaccacctgctatcaggtttccgcctattgggtcacccactatttatgtccatgaaccaagcccaata 13279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 89639 - 89558
Alignment:
Q  173 tctgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggttgtgttaggcccaaccacgattt 254  Q
    ||||| ||| ||||||||| ||| ||||||  |||| ||| |||||||||||||| |||||||||||| |||||||| ||||    
T  89639 tctgataatatgtttataagtggggacaatattcaccttacaagtcggttttgtgaggttgtgttaggtccaaccacaattt 89558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 5732 - 5802
Alignment:
Q  278 caagatccattgggtcacctgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    ||||||| |||||||||||||||||||| ||| |||||||| |||||| |  |||||| ||||||| ||||    
T  5732 caagatctattgggtcacctgctatcagattttcgctatcgagccacctatcatttatgtccacgaaccaa 5802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 2616 - 2667
Alignment:
Q  297 tgctatcaggtttccgctatcgggccacccacaatttatatccacgagccaa 348  Q
    |||||||||||||||||||||||||||||| | |||||| || |||| ||||    
T  2616 tgctatcaggtttccgctatcgggccaccccccatttatgtctacgaaccaa 2667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 121553 - 121633
Alignment:
Q  175 tgacaatgtgtttataaatggagacaatcctcactttataagtcggttttgtggggtt-gtgttaggcccaaccacgattt 254  Q
    ||||||||||||| ||| ||| | | |||||| | | | ||| ||||||||||||||| |||||| |||||||||||||||    
T  121553 tgacaatgtgtttgtaagtgggggccatcctcccatcacaagccggttttgtggggtttgtgttaagcccaaccacgattt 121633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University