View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11120_high_9 (Length: 223)

Name: NF11120_high_9
Description: NF11120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11120_high_9
NF11120_high_9
[»] chr2 (61 HSPs)
chr2 (1-215)||(40332077-40332291)
chr2 (1-215)||(28550815-28551028)
chr2 (1-215)||(31967940-31968153)
chr2 (6-215)||(22776190-22776398)
chr2 (6-215)||(22781568-22781776)
chr2 (6-215)||(44840424-44840631)
chr2 (67-215)||(14581505-14581653)
chr2 (1-215)||(1586929-1587142)
chr2 (1-199)||(22785552-22785749)
chr2 (80-198)||(3277037-3277155)
chr2 (1-215)||(33074216-33074439)
chr2 (1-199)||(34321823-34322030)
chr2 (80-215)||(23234997-23235141)
chr2 (80-215)||(28711664-28711808)
chr2 (80-215)||(35743966-35744110)
chr2 (120-215)||(19540406-19540501)
chr2 (68-187)||(23392630-23392750)
chr2 (123-215)||(24377091-24377183)
chr2 (120-215)||(13963993-13964088)
chr2 (120-215)||(18376921-18377016)
chr2 (6-215)||(22802451-22802668)
chr2 (80-215)||(25829124-25829268)
chr2 (120-215)||(30666979-30667074)
chr2 (1-215)||(31327852-31328075)
chr2 (1-215)||(31334573-31334796)
chr2 (123-215)||(10009768-10009860)
chr2 (123-215)||(25037277-25037369)
chr2 (123-215)||(25041384-25041476)
chr2 (1-215)||(28701116-28701339)
chr2 (123-215)||(31800905-31800997)
chr2 (120-215)||(20568765-20568860)
chr2 (120-215)||(22188117-22188212)
chr2 (120-215)||(22455005-22455100)
chr2 (121-215)||(21537264-21537358)
chr2 (80-215)||(6392624-6392768)
chr2 (119-215)||(22317583-22317679)
chr2 (147-215)||(39037684-39037752)
chr2 (147-215)||(40782467-40782535)
chr2 (124-215)||(28140638-28140729)
chr2 (123-215)||(9015388-9015478)
chr2 (150-215)||(24779333-24779398)
chr2 (124-199)||(30557339-30557415)
chr2 (147-211)||(30621210-30621274)
chr2 (147-211)||(30623831-30623895)
chr2 (80-187)||(45087150-45087266)
chr2 (146-215)||(23184345-23184414)
chr2 (146-215)||(23595608-23595677)
chr2 (150-215)||(24576025-24576090)
chr2 (80-187)||(20152001-20152117)
chr2 (80-204)||(6574089-6574223)
chr2 (147-212)||(25189391-25189456)
chr2 (175-215)||(22258191-22258231)
chr2 (123-215)||(24850684-24850776)
chr2 (120-215)||(38781388-38781484)
chr2 (151-215)||(41121765-41121829)
chr2 (165-204)||(26619161-26619200)
chr2 (165-199)||(19115089-19115123)
chr2 (165-199)||(44881173-44881207)
chr2 (172-210)||(19498010-19498048)
chr2 (165-198)||(22272139-22272172)
chr2 (167-199)||(24814645-24814677)
[»] chr4 (58 HSPs)
chr4 (1-215)||(17398582-17398795)
chr4 (6-215)||(3105323-3105540)
chr4 (1-215)||(40860657-40860871)
chr4 (78-215)||(22190836-22190973)
chr4 (1-215)||(6517475-6517698)
chr4 (2-215)||(20977447-20977658)
chr4 (1-199)||(15475050-15475248)
chr4 (61-195)||(16940026-16940169)
chr4 (68-215)||(9751513-9751661)
chr4 (1-215)||(10692841-10693064)
chr4 (1-215)||(10906607-10906830)
chr4 (2-204)||(27188548-27188748)
chr4 (1-215)||(39419642-39419855)
chr4 (80-215)||(9140902-9141046)
chr4 (120-215)||(37985638-37985733)
chr4 (123-215)||(55380280-55380372)
chr4 (76-215)||(38513868-38514007)
chr4 (1-204)||(54679931-54680141)
chr4 (147-215)||(3395580-3395648)
chr4 (80-215)||(19884692-19884836)
chr4 (120-207)||(12601099-12601186)
chr4 (120-215)||(25651130-25651224)
chr4 (120-215)||(37435561-37435656)
chr4 (80-213)||(29121362-29121504)
chr4 (80-215)||(8105628-8105772)
chr4 (80-215)||(14904333-14904477)
chr4 (147-215)||(19621114-19621182)
chr4 (120-215)||(10072925-10073020)
chr4 (120-215)||(12811204-12811296)
chr4 (150-215)||(19666362-19666427)
chr4 (1-215)||(56532958-56533182)
chr4 (1-199)||(413008-413215)
chr4 (80-215)||(29680521-29680665)
chr4 (147-215)||(40846089-40846157)
chr4 (123-215)||(19911909-19912002)
chr4 (2-187)||(3499560-3499745)
chr4 (123-215)||(16853493-16853585)
chr4 (120-204)||(22675546-22675630)
chr4 (123-215)||(45833384-45833476)
chr4 (120-215)||(16632430-16632525)
chr4 (165-215)||(23750512-23750562)
chr4 (80-187)||(3483739-3483855)
chr4 (147-215)||(6641674-6641742)
chr4 (123-215)||(14604936-14605028)
chr4 (120-215)||(13576140-13576235)
chr4 (80-215)||(14153980-14154115)
chr4 (140-199)||(1672395-1672454)
chr4 (140-199)||(1674870-1674929)
chr4 (2-131)||(17700708-17700835)
chr4 (80-212)||(56034567-56034708)
chr4 (1-123)||(55731870-55731992)
chr4 (165-199)||(8685514-8685548)
chr4 (1-78)||(14571161-14571237)
chr4 (120-204)||(17247245-17247329)
chr4 (1-44)||(13576012-13576055)
chr4 (165-204)||(17540396-17540435)
chr4 (1-31)||(17247426-17247456)
chr4 (165-199)||(17788118-17788152)
[»] chr1 (55 HSPs)
chr1 (1-215)||(46088984-46089198)
chr1 (1-212)||(10250984-10251194)
chr1 (1-215)||(21702809-21703031)
chr1 (1-204)||(21204793-21204997)
chr1 (1-215)||(21120934-21121149)
chr1 (1-215)||(21135030-21135245)
chr1 (1-215)||(48570094-48570316)
chr1 (1-215)||(30572192-30572414)
chr1 (1-215)||(37642243-37642457)
chr1 (1-199)||(21984607-21984805)
chr1 (9-215)||(23024783-23024987)
chr1 (1-196)||(42284642-42284836)
chr1 (61-215)||(25448487-25448651)
chr1 (2-215)||(19215607-19215818)
chr1 (1-215)||(35040161-35040384)
chr1 (1-215)||(44821407-44821630)
chr1 (1-215)||(2327301-2327525)
chr1 (80-215)||(22600123-22600267)
chr1 (120-215)||(28492394-28492489)
chr1 (80-215)||(22201677-22201821)
chr1 (82-215)||(36134185-36134326)
chr1 (120-215)||(33256341-33256436)
chr1 (120-215)||(33276513-33276608)
chr1 (80-215)||(1577862-1578006)
chr1 (123-215)||(12284418-12284510)
chr1 (80-215)||(22427298-22427442)
chr1 (119-215)||(1900340-1900436)
chr1 (123-215)||(20954466-20954558)
chr1 (80-211)||(32785878-32786018)
chr1 (119-215)||(38282562-38282657)
chr1 (80-215)||(39200933-39201077)
chr1 (147-212)||(30893090-30893155)
chr1 (151-215)||(10757416-10757480)
chr1 (120-212)||(21191855-21191947)
chr1 (80-215)||(22464750-22464894)
chr1 (120-215)||(2268526-2268621)
chr1 (120-215)||(21028788-21028883)
chr1 (120-215)||(29215792-29215887)
chr1 (84-198)||(35401821-35401944)
chr1 (1-215)||(2834684-2834908)
chr1 (123-199)||(7745083-7745159)
chr1 (120-204)||(14263441-14263525)
chr1 (147-215)||(22153852-22153920)
chr1 (120-215)||(19717519-19717614)
chr1 (82-215)||(16235239-16235381)
chr1 (147-215)||(12613831-12613899)
chr1 (152-215)||(26702151-26702214)
chr1 (120-215)||(48704199-48704294)
chr1 (120-212)||(2267087-2267179)
chr1 (120-199)||(7309830-7309908)
chr1 (80-199)||(34255467-34255585)
chr1 (120-195)||(17024954-17025029)
chr1 (167-210)||(17371042-17371085)
chr1 (124-198)||(23036521-23036595)
chr1 (165-198)||(18896632-18896665)
[»] scaffold1359 (2 HSPs)
scaffold1359 (2-210)||(1658-1865)
scaffold1359 (6-212)||(552-767)
[»] chr5 (48 HSPs)
chr5 (1-212)||(28464271-28464481)
chr5 (1-215)||(10848765-10848979)
chr5 (1-212)||(3245364-3245583)
chr5 (1-215)||(25930087-25930301)
chr5 (1-215)||(9088961-9089174)
chr5 (68-215)||(35932003-35932151)
chr5 (1-199)||(35986163-35986361)
chr5 (1-215)||(29138330-29138551)
chr5 (1-215)||(15516962-15517184)
chr5 (68-215)||(28139599-28139755)
chr5 (7-215)||(30742973-30743189)
chr5 (80-215)||(4887014-4887158)
chr5 (1-199)||(26759157-26759364)
chr5 (116-215)||(30115883-30115982)
chr5 (1-215)||(11993880-11994103)
chr5 (4-215)||(14086462-14086684)
chr5 (68-199)||(21660220-21660352)
chr5 (123-215)||(23413027-23413119)
chr5 (66-204)||(26765501-26765649)
chr5 (80-215)||(41566435-41566579)
chr5 (120-215)||(21910548-21910643)
chr5 (2-204)||(23391535-23391737)
chr5 (123-215)||(21072293-21072385)
chr5 (120-215)||(7745743-7745838)
chr5 (123-215)||(33933259-33933352)
chr5 (1-215)||(42243673-42243896)
chr5 (151-215)||(89503-89567)
chr5 (147-215)||(6499231-6499299)
chr5 (147-215)||(12352872-12352940)
chr5 (147-215)||(19536378-19536446)
chr5 (127-215)||(26784346-26784434)
chr5 (120-215)||(9398784-9398879)
chr5 (147-215)||(6512505-6512573)
chr5 (147-215)||(17814960-17815028)
chr5 (80-215)||(33022656-33022800)
chr5 (120-215)||(21199053-21199148)
chr5 (120-215)||(23881059-23881154)
chr5 (6-215)||(31117869-31118088)
chr5 (120-210)||(32160763-32160853)
chr5 (120-215)||(642757-642849)
chr5 (120-215)||(13545562-13545657)
chr5 (120-215)||(20550887-20550981)
chr5 (165-215)||(21099799-21099849)
chr5 (123-210)||(11208039-11208125)
chr5 (1-114)||(5429985-5430099)
chr5 (165-214)||(25096921-25096969)
chr5 (165-214)||(25154891-25154939)
chr5 (1-44)||(30115798-30115841)
[»] chr8 (59 HSPs)
chr8 (1-215)||(6407714-6407927)
chr8 (1-215)||(14989400-14989614)
chr8 (1-204)||(43639782-43639985)
chr8 (1-215)||(13430576-13430791)
chr8 (60-215)||(18151653-18151809)
chr8 (2-215)||(40845329-40845550)
chr8 (1-199)||(21301026-21301224)
chr8 (68-198)||(21288408-21288539)
chr8 (1-187)||(33560173-33560359)
chr8 (1-215)||(15336028-15336251)
chr8 (1-215)||(15425093-15425316)
chr8 (1-215)||(15516397-15516620)
chr8 (80-215)||(22673766-22673910)
chr8 (1-215)||(36105183-36105406)
chr8 (1-212)||(24551265-24551485)
chr8 (80-215)||(16188972-16189116)
chr8 (1-215)||(45538379-45538602)
chr8 (1-215)||(9320557-9320781)
chr8 (80-212)||(22663107-22663248)
chr8 (80-215)||(16207294-16207438)
chr8 (1-215)||(23185166-23185389)
chr8 (121-215)||(24646326-24646420)
chr8 (123-215)||(602791-602883)
chr8 (120-212)||(12757831-12757923)
chr8 (1-215)||(17797410-17797633)
chr8 (123-215)||(18679803-18679895)
chr8 (123-215)||(18718989-18719081)
chr8 (123-215)||(39693523-39693615)
chr8 (80-212)||(17441827-17441967)
chr8 (120-215)||(19156184-19156279)
chr8 (1-204)||(1745158-1745362)
chr8 (120-215)||(16681371-16681466)
chr8 (147-214)||(20382489-20382556)
chr8 (119-215)||(21932871-21932967)
chr8 (122-212)||(18321229-18321319)
chr8 (4-215)||(1237625-1237845)
chr8 (123-212)||(17525800-17525889)
chr8 (150-215)||(25164058-25164123)
chr8 (151-215)||(29693303-29693367)
chr8 (151-214)||(17267463-17267526)
chr8 (120-215)||(17914447-17914542)
chr8 (120-215)||(43644884-43644979)
chr8 (120-197)||(23263680-23263757)
chr8 (123-199)||(24833127-24833204)
chr8 (120-215)||(17701733-17701828)
chr8 (80-214)||(30421447-30421591)
chr8 (120-210)||(45567969-45568059)
chr8 (120-204)||(19943234-19943319)
chr8 (120-204)||(18685465-18685549)
chr8 (120-204)||(18722714-18722798)
chr8 (120-204)||(18731059-18731143)
chr8 (149-212)||(19707497-19707560)
chr8 (120-187)||(33082873-33082940)
chr8 (119-215)||(18121176-18121269)
chr8 (153-187)||(45292842-45292876)
chr8 (142-215)||(2810811-2810882)
chr8 (172-210)||(7018416-7018454)
chr8 (172-210)||(20259652-20259690)
chr8 (172-210)||(21046282-21046320)
[»] chr7 (70 HSPs)
chr7 (2-210)||(14425444-14425651)
chr7 (1-215)||(48062772-48062986)
chr7 (55-212)||(1293025-1293182)
chr7 (1-215)||(27871710-27871925)
chr7 (1-215)||(32264669-32264884)
chr7 (1-199)||(19339202-19339400)
chr7 (68-215)||(24794732-24794881)
chr7 (1-215)||(8182922-8183144)
chr7 (1-199)||(21381380-21381579)
chr7 (1-204)||(2265462-2265674)
chr7 (1-215)||(4821466-4821688)
chr7 (1-212)||(4411914-4412125)
chr7 (6-212)||(14426542-14426757)
chr7 (1-215)||(48805831-48806045)
chr7 (123-215)||(29935432-29935524)
chr7 (120-215)||(2913679-2913774)
chr7 (120-215)||(16111955-16112050)
chr7 (120-215)||(16309978-16310073)
chr7 (80-212)||(21283395-21283536)
chr7 (80-215)||(13648721-13648865)
chr7 (120-212)||(19711084-19711176)
chr7 (120-215)||(13880096-13880191)
chr7 (80-214)||(15088513-15088656)
chr7 (124-215)||(16316632-16316723)
chr7 (120-215)||(30944394-30944489)
chr7 (1-187)||(12174283-12174479)
chr7 (80-204)||(23279980-23280113)
chr7 (1-212)||(35952630-35952851)
chr7 (4-170)||(15704445-15704620)
chr7 (120-215)||(331637-331731)
chr7 (149-212)||(5000922-5000985)
chr7 (120-215)||(13137966-13138061)
chr7 (120-215)||(21692279-21692374)
chr7 (120-215)||(33605677-33605772)
chr7 (123-213)||(13730749-13730839)
chr7 (119-215)||(9069554-9069650)
chr7 (147-215)||(13018603-13018671)
chr7 (123-215)||(13260689-13260781)
chr7 (120-212)||(28409034-28409126)
chr7 (120-212)||(39284635-39284727)
chr7 (120-215)||(13302802-13302897)
chr7 (120-215)||(21695393-21695488)
chr7 (120-215)||(30025897-30025992)
chr7 (120-215)||(44467056-44467151)
chr7 (120-215)||(48236973-48237068)
chr7 (120-210)||(19237114-19237204)
chr7 (123-215)||(2500030-2500122)
chr7 (147-215)||(11792899-11792967)
chr7 (1-215)||(28622299-28622522)
chr7 (119-215)||(33691782-33691878)
chr7 (120-215)||(10883244-10883339)
chr7 (120-215)||(22578092-22578187)
chr7 (120-211)||(30945427-30945518)
chr7 (148-215)||(41842372-41842439)
chr7 (1-181)||(16542963-16543152)
chr7 (1-181)||(16622510-16622699)
chr7 (123-212)||(11319400-11319489)
chr7 (147-215)||(12366846-12366914)
chr7 (120-212)||(24788136-24788228)
chr7 (120-215)||(9709873-9709968)
chr7 (120-199)||(15467924-15468003)
chr7 (80-186)||(13692372-13692478)
chr7 (120-213)||(14193108-14193201)
chr7 (1-44)||(9709745-9709788)
chr7 (84-123)||(16556664-16556703)
chr7 (84-123)||(16608959-16608998)
chr7 (1-44)||(33605858-33605901)
chr7 (1-44)||(48236845-48236888)
chr7 (165-215)||(4494569-4494619)
chr7 (172-209)||(14745750-14745787)
[»] scaffold0056 (3 HSPs)
scaffold0056 (1-212)||(25566-25777)
scaffold0056 (1-215)||(34705-34919)
scaffold0056 (165-197)||(36249-36281)
[»] chr6 (44 HSPs)
chr6 (1-215)||(19065957-19066171)
chr6 (1-209)||(12348995-12349211)
chr6 (1-215)||(22076337-22076560)
chr6 (1-215)||(16336123-16336346)
chr6 (61-211)||(12423261-12423420)
chr6 (80-215)||(19086154-19086288)
chr6 (1-215)||(33351859-33352079)
chr6 (2-215)||(17316467-17316678)
chr6 (1-204)||(21618251-21618463)
chr6 (1-204)||(19832962-19833175)
chr6 (4-212)||(15954702-15954919)
chr6 (111-212)||(19482751-19482852)
chr6 (80-215)||(15302196-15302340)
chr6 (80-215)||(20487927-20488071)
chr6 (123-215)||(24116824-24116916)
chr6 (1-215)||(26589595-26589812)
chr6 (119-215)||(32544261-32544357)
chr6 (120-212)||(15987232-15987324)
chr6 (1-215)||(16877209-16877432)
chr6 (120-215)||(18378310-18378405)
chr6 (123-214)||(20112761-20112852)
chr6 (119-213)||(9717841-9717935)
chr6 (147-215)||(12715505-12715573)
chr6 (123-215)||(16265211-16265303)
chr6 (119-215)||(22802137-22802233)
chr6 (120-215)||(13602168-13602263)
chr6 (120-215)||(15531682-15531777)
chr6 (120-215)||(14100498-14100592)
chr6 (140-215)||(17381517-17381592)
chr6 (148-215)||(25594064-25594131)
chr6 (120-215)||(29918013-29918108)
chr6 (165-215)||(19623975-19624025)
chr6 (120-198)||(21625114-21625192)
chr6 (119-215)||(26972285-26972379)
chr6 (80-211)||(20730713-20730853)
chr6 (147-211)||(23284564-23284628)
chr6 (120-215)||(18435552-18435647)
chr6 (120-199)||(21235137-21235216)
chr6 (144-199)||(13435544-13435599)
chr6 (120-187)||(19688790-19688857)
chr6 (120-215)||(26943572-26943667)
chr6 (1-44)||(20730634-20730677)
chr6 (165-198)||(10640522-10640555)
chr6 (1-45)||(21235288-21235332)
[»] chr3 (61 HSPs)
chr3 (1-215)||(21605604-21605818)
chr3 (1-215)||(46796318-46796531)
chr3 (1-215)||(21636620-21636834)
chr3 (1-215)||(30054167-30054381)
chr3 (1-212)||(21640865-21641084)
chr3 (1-215)||(49666356-49666569)
chr3 (1-187)||(40850991-40851177)
chr3 (1-204)||(14955433-14955645)
chr3 (2-215)||(9699989-9700200)
chr3 (1-215)||(1727966-1728179)
chr3 (1-215)||(20627372-20627595)
chr3 (6-204)||(5213583-5213789)
chr3 (1-215)||(24775473-24775698)
chr3 (1-199)||(2785075-2785283)
chr3 (80-215)||(53056747-53056891)
chr3 (120-215)||(29855404-29855499)
chr3 (80-215)||(11223559-11223702)
chr3 (120-215)||(13780653-13780748)
chr3 (1-215)||(47207701-47207925)
chr3 (123-215)||(20646149-20646241)
chr3 (80-215)||(41494994-41495138)
chr3 (124-215)||(22140759-22140850)
chr3 (120-215)||(37467328-37467423)
chr3 (114-215)||(12963149-12963249)
chr3 (80-196)||(14969341-14969466)
chr3 (123-215)||(14393076-14393168)
chr3 (123-215)||(16658690-16658782)
chr3 (80-215)||(49642782-49642926)
chr3 (122-213)||(28582103-28582194)
chr3 (80-212)||(13948334-13948475)
chr3 (80-199)||(33583240-33583369)
chr3 (147-215)||(31303381-31303449)
chr3 (120-215)||(6090727-6090822)
chr3 (55-210)||(37412605-37412759)
chr3 (120-215)||(40799869-40799964)
chr3 (141-215)||(11868264-11868338)
chr3 (119-215)||(18121690-18121786)
chr3 (119-215)||(18142820-18142916)
chr3 (147-215)||(22804119-22804187)
chr3 (120-215)||(16032520-16032615)
chr3 (120-199)||(38177712-38177791)
chr3 (120-215)||(49553558-49553653)
chr3 (125-215)||(2561183-2561273)
chr3 (120-198)||(11909093-11909171)
chr3 (151-212)||(15903196-15903257)
chr3 (147-212)||(17239018-17239083)
chr3 (140-215)||(25398344-25398419)
chr3 (120-215)||(29951507-29951602)
chr3 (120-215)||(30000661-30000756)
chr3 (120-215)||(47405490-47405585)
chr3 (120-214)||(12388941-12389035)
chr3 (151-215)||(19889045-19889107)
chr3 (123-215)||(12726302-12726394)
chr3 (120-187)||(13824092-13824159)
chr3 (80-198)||(46349864-46349991)
chr3 (120-177)||(45858818-45858875)
chr3 (147-187)||(50300246-50300286)
chr3 (120-197)||(23538235-23538312)
chr3 (168-204)||(12968312-12968348)
chr3 (120-213)||(52920403-52920496)
chr3 (172-204)||(13557777-13557809)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-215)||(17667-17880)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-215)||(2604-2806)
[»] scaffold0217 (3 HSPs)
scaffold0217 (1-212)||(9559-9778)
scaffold0217 (67-215)||(22088-22246)
scaffold0217 (80-215)||(19027-19171)
[»] scaffold0352 (1 HSPs)
scaffold0352 (2-215)||(723-935)
[»] scaffold0527 (2 HSPs)
scaffold0527 (1-180)||(7963-8150)
scaffold0527 (1-88)||(1-87)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-212)||(60802-61022)
[»] scaffold0414 (1 HSPs)
scaffold0414 (1-204)||(7048-7260)
[»] scaffold0045 (1 HSPs)
scaffold0045 (78-215)||(87578-87715)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-215)||(215389-215612)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-215)||(9151-9373)
[»] scaffold0280 (1 HSPs)
scaffold0280 (80-215)||(2702-2845)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-215)||(3300-3523)
[»] scaffold0035 (2 HSPs)
scaffold0035 (61-215)||(99159-99320)
scaffold0035 (123-212)||(19495-19584)
[»] scaffold0004 (4 HSPs)
scaffold0004 (61-215)||(211394-211558)
scaffold0004 (120-215)||(377579-377674)
scaffold0004 (123-215)||(220234-220326)
scaffold0004 (124-206)||(244308-244390)
[»] scaffold0387 (1 HSPs)
scaffold0387 (68-215)||(7377-7525)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-199)||(5225-5424)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-215)||(78258-78481)
[»] scaffold0247 (3 HSPs)
scaffold0247 (116-215)||(25415-25514)
scaffold0247 (1-98)||(23455-23551)
scaffold0247 (172-215)||(15811-15854)
[»] scaffold1331 (1 HSPs)
scaffold1331 (8-215)||(1598-1814)
[»] scaffold0026 (2 HSPs)
scaffold0026 (79-215)||(60012-60157)
scaffold0026 (80-215)||(7922-8066)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-215)||(6632-6855)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-156)||(65321-65484)
scaffold0011 (1-156)||(144366-144529)
scaffold0011 (120-210)||(164966-165056)
[»] scaffold0016 (1 HSPs)
scaffold0016 (2-204)||(731-933)
[»] scaffold0411 (1 HSPs)
scaffold0411 (123-215)||(12205-12297)
[»] scaffold0028 (1 HSPs)
scaffold0028 (61-215)||(5553-5717)
[»] scaffold0426 (1 HSPs)
scaffold0426 (120-215)||(13567-13662)
[»] scaffold0359 (1 HSPs)
scaffold0359 (120-215)||(5710-5805)
[»] scaffold0116 (1 HSPs)
scaffold0116 (120-215)||(20991-21086)
[»] scaffold0084 (3 HSPs)
scaffold0084 (120-215)||(49328-49423)
scaffold0084 (147-215)||(32481-32549)
scaffold0084 (120-210)||(365-455)
[»] scaffold0227 (1 HSPs)
scaffold0227 (80-215)||(22672-22816)
[»] scaffold0251 (1 HSPs)
scaffold0251 (119-206)||(7708-7795)
[»] scaffold0171 (1 HSPs)
scaffold0171 (120-215)||(27449-27544)
[»] scaffold0290 (2 HSPs)
scaffold0290 (80-213)||(18592-18734)
scaffold0290 (1-29)||(18511-18539)
[»] scaffold0211 (1 HSPs)
scaffold0211 (120-210)||(15642-15732)
[»] scaffold0771 (1 HSPs)
scaffold0771 (80-212)||(474-615)
[»] scaffold0083 (1 HSPs)
scaffold0083 (80-212)||(25946-26087)
[»] scaffold0193 (1 HSPs)
scaffold0193 (120-215)||(15789-15885)
[»] scaffold0161 (2 HSPs)
scaffold0161 (120-212)||(10128-10220)
scaffold0161 (147-212)||(14819-14884)
[»] scaffold0337 (1 HSPs)
scaffold0337 (120-215)||(14644-14739)
[»] scaffold0065 (1 HSPs)
scaffold0065 (120-215)||(1686-1781)
[»] scaffold0023 (1 HSPs)
scaffold0023 (80-198)||(103585-103712)
[»] scaffold0132 (1 HSPs)
scaffold0132 (120-204)||(38105-38189)
[»] scaffold0324 (1 HSPs)
scaffold0324 (120-215)||(9952-10047)
[»] scaffold0003 (2 HSPs)
scaffold0003 (120-215)||(90075-90170)
scaffold0003 (1-44)||(89947-89990)
[»] scaffold0220 (1 HSPs)
scaffold0220 (120-198)||(1817-1895)
[»] scaffold0146 (1 HSPs)
scaffold0146 (147-212)||(15116-15181)
[»] scaffold0005 (2 HSPs)
scaffold0005 (123-215)||(212350-212442)
scaffold0005 (1-78)||(246139-246215)
[»] scaffold0364 (1 HSPs)
scaffold0364 (120-215)||(6003-6098)
[»] scaffold0120 (2 HSPs)
scaffold0120 (120-215)||(36795-36890)
scaffold0120 (120-215)||(42115-42210)
[»] scaffold0047 (1 HSPs)
scaffold0047 (120-215)||(9899-9994)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-134)||(11447-11580)
[»] scaffold1747 (1 HSPs)
scaffold1747 (120-204)||(1324-1408)
[»] scaffold1745 (1 HSPs)
scaffold1745 (120-204)||(3-87)
[»] scaffold0479 (1 HSPs)
scaffold0479 (123-215)||(9965-10057)
[»] scaffold0210 (1 HSPs)
scaffold0210 (123-215)||(1656-1748)
[»] scaffold0908 (1 HSPs)
scaffold0908 (115-204)||(3910-3999)
[»] scaffold0530 (1 HSPs)
scaffold0530 (147-195)||(2042-2090)
[»] scaffold0273 (1 HSPs)
scaffold0273 (165-204)||(5634-5673)
[»] scaffold0064 (1 HSPs)
scaffold0064 (147-214)||(43966-44032)
[»] scaffold0022 (3 HSPs)
scaffold0022 (165-215)||(37398-37448)
scaffold0022 (165-215)||(135458-135508)
scaffold0022 (147-215)||(159051-159119)
[»] scaffold0607 (1 HSPs)
scaffold0607 (174-215)||(6002-6043)
[»] scaffold0040 (1 HSPs)
scaffold0040 (165-198)||(1586-1619)
[»] scaffold0334 (1 HSPs)
scaffold0334 (177-212)||(7823-7858)
[»] scaffold0025 (1 HSPs)
scaffold0025 (144-215)||(74577-74648)
[»] scaffold0861 (1 HSPs)
scaffold0861 (120-193)||(4967-5040)
[»] scaffold0269 (1 HSPs)
scaffold0269 (115-204)||(7292-7381)
[»] scaffold0018 (1 HSPs)
scaffold0018 (167-199)||(6589-6621)


Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 40332291 - 40332077
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  40332291 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttcaaagctgctttctaggattcaaactcgcctaaaattgcagaagactggaaaagt 40332192  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||     
T  40332191 atagcaacggctattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactaactccattactct 40332092  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  40332091 gtttttgtctctgct 40332077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 28550815 - 28551028
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| ||   ||| | |  |||| ||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  28550815 atcaccagaagctgcagttcatcaggagatgcaatttaaaacctcaaaagctgttt-caaggattcaaactcgcctaaaattgcagaagactggaaaagt 28550913  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    |||| |||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28550914 atagaaacaactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactct 28551013  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  28551014 gtttttgtctctgct 28551028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 31967940 - 31968153
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||| ||||| |||  ||||| |  |||| ||||| | ||||| ||||||||| |||||||||||||||||||||||||    
T  31967940 atcaccagaagctgcagttcatcagaagatgcaacttaaagcctcaaaagttgttt-caaggattcaaactcgcataaaattgcagaagactggaaaagt 31968038  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    ||||||||  ||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  31968039 atagcaacaactattttgaaatgcattggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactatctccactactct 31968138  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  31968139 gtttttgtctctgct 31968153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 22776190 - 22776398
Alignment:
Q  6 cagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagtatagc 105  Q
    ||||||||| |||||||||||||||| |||  |||||||  |||| ||||| | ||| | || ||||||||||||||||| |||||| ||||||||||||    
T  22776190 cagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgttt-caaggtttcagactcgcctaaaattgcaaaagacttgaaaagtatagc 22776288  T
Q  106 aacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttg 205  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  22776289 aacggctattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccagtactctgtttt 22776388  T
Q  206 tgtctctgct 215  Q
    ||||||||||    
T  22776389 tgtctctgct 22776398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 22781568 - 22781776
Alignment:
Q  6 cagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagtatagc 105  Q
    ||||||||| |||||||||||||||| |||  |||||||  |||| ||||| | ||| | || ||||||||||||||||| |||||| ||||||||||||    
T  22781568 cagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgttt-caaggtttcagactcgcctaaaattgcaaaagacttgaaaagtatagc 22781666  T
Q  106 aacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttg 205  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  22781667 aacggctattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccagtactctgtttt 22781766  T
Q  206 tgtctctgct 215  Q
    ||||||||||    
T  22781767 tgtctctgct 22781776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 44840631 - 44840424
Alignment:
Q  6 cagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagtatagc 105  Q
    ||||||||||||||||||| |||||| |||  |||||||  |||| ||||| | ||||| ||||||||||||| |||||||| ||||| |||||||| ||    
T  44840631 cagaagctgcagttcatcaagagatgcaacttaaagcttcaaaagctgttt-caaggattcaaactcgcctaacattgcaga-gactgaaaaagtatggc 44840534  T
Q  106 aacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttg 205  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  44840533 aacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttt 44840434  T
Q  206 tgtctctgct 215  Q
    ||||||||||    
T  44840433 tgtctctgct 44840424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 67 - 215
Target Start/End: Complemental strand, 14581653 - 14581505
Alignment:
Q  67 aaactcgcctaaaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgttt 166  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  14581653 aaactcgcctaaaattgcagaagactggaaaaatatggcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgttt 14581554  T
Q  167 gtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||||    
T  14581553 gtacgaagtgtacaaccactatctccacttctctgattttgtctctgct 14581505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 1586929 - 1587142
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||| |||||   ||||| |||||||  || || |||||||||||||| |||||    
T  1586929 atcaccagaagctggagttcatcaggagatggaacttaaagcttcaaaagttgtttaa-aggattcaaactcatctgaagattgcagaagactgaaaaag 1587027  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||  |||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1587028 tattacaacggctattttgaaaggcattggatgctaattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 1587127  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  1587128 tgttt-tgtctctgct 1587142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 22785552 - 22785749
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||  |||| | ||| | ||  | ||||||||||||||||||||||| |||||||| ||    
T  22785552 atcaccagaagctacagttcatcaggagatgcaacttaaagcttcaaaagctattt-caagatttcaaactcgcctaaaattgcagaaaactggaaatgt 22785650  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  22785651 atagcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacttttgtacaaagtgtataaccactatctccactactc 22785749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 80 - 198
Target Start/End: Complemental strand, 3277155 - 3277037
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtac 179  Q
    |||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  3277155 attgcagaagactgaaaaagtataacaacggctaatttggaaggcattggatgcttattcttcaaagagcgttgatatagtacgtttgtacgaagtgtac 3277056  T
Q  180 aaccactatctccactact 198  Q
    |||||||||||||||||||    
T  3277055 aaccactatctccactact 3277037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 33074439 - 33074216
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||| ||||| || |||||||||||||||| |||  ||| |||  |||| |||||   ||||| |||||||| ||||| ||||||||||||||||||||    
T  33074439 atcactagaagttgtagttcatcaggagatgcaacttaaaacttcaaaagctgtttaa-aggattcaaactcgtctaaagattgcagaagactggaaaag 33074341  T
Q  100 tatagcaacggctattttgaa---------aggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||||||||| |||||||| |         ||||||| |||||||||| |||||||| |||||||||| |||| ||||||||||||||||||||||||||    
T  33074340 tatagcaacgactattttggacagattggaaggcattagatgcttattcttcaaaaaacgttgacataatacgattgtacgaagtgtacaaccactatct 33074241  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||||||||    
T  33074240 ccactactctgtttttgtctctgct 33074216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 34321823 - 34322030
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||| |||||||| | |||||||||||||| |||  ||||| |  |||| |||||   ||||| |||||||| ||||| |||||||||| |||||||||    
T  34321823 atcactagaagctgtaattcatcaggagatgcaacttaaagcctcaaaagctgtttaa-aggattcaaactcgtctaaagattgcagaagcctggaaaag 34321921  T
Q  100 tatagcaacggctattttga---------aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||||||||| |||||||||         |||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  34321922 tatagcaacgactattttgaaaggattgaaaggcattggattcttattcttcaaagagcgttgacatagtacgtttgtatgaagtgtacaaccactatct 34322021  T
Q  191 ccactactc 199  Q
     ||||||||    
T  34322022 tcactactc 34322030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 23235141 - 23234997
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaag---------gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||         |||||||||||||||| ||  || || ||||||| |||||  ||||||    
T  23235141 attgcagaagactggaagagtaaagcaacgactattttgaaagaatttgaaggcattggatgcttattctttgaagagtgttgacaaagtacaattgtac 23235042  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23235041 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 23234997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 28711664 - 28711808
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaa---------aggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||| ||||||| |||||| |||         ||||||||||||||| || |||||| |||||||| | |||||||||||||    
T  28711664 attgcagaagactggaaaagtaaagcaacgactatttcgaatgaatttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagtacgtttgtac 28711763  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||    
T  28711764 gaagtgtacaaccactacctccactactctgtttttgtctctgct 28711808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 35743966 - 35744110
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||| | |||||||||||||||||| |||||||| ||||         ||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  35743966 attgcagaatattggaaaagtatagcaacgactattttggaaggatttgaaggcattgaatgctaattcttcaaagagcgttgacatagtacgtttgtac 35744065  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||| |||||||| ||||||||||||||||||||| ||||||||||    
T  35744066 gaaatgtacaactactatctccactactcagtttttgtctctgct 35744110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 19540501 - 19540406
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||| ||||||||||| || || ||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19540501 aaggtattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 19540406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 23392630 - 23392750
Alignment:
Q  68 aactcgccta-aaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgttt 166  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||  |  ||||| ||||||||| ||||||   |    
T  23392630 aactcgcctagaaattacagaagactggaaaagtatggcaacggctattttgaaatgcattggatgctttcttctcaaagagcgttgacctagtacaact 23392729  T
Q  167 gtacgaagtgtacaaccacta 187  Q
    |||||||||||||||||||||    
T  23392730 gtacgaagtgtacaaccacta 23392750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 24377183 - 24377091
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24377183 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 24377091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 13963993 - 13964088
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13963993 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 13964088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 18376921 - 18377016
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18376921 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 18377016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 22802668 - 22802451
Alignment:
Q  6 cagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtatag 104  Q
    ||||| |||||||||||||||||||| |||  |||| ||  |||| | |||  | |||| |||||||| ||||| ||||||||||||| |||| ||| ||    
T  22802668 cagaacctgcagttcatcaggagatgcaacttaaagattcaaaagctatttaat-ggattcaaactcgtctaaagattgcagaagactagaaaggtaaag 22802570  T
Q  105 caacggctattttgaaaggcattg---------gatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccact 195  Q
    ||| |||||||||||||||  |||         |||||||||| |||||| || ||||||| |||||||||||||||||||||||||||||| |||||||    
T  22802569 caatggctattttgaaaggatttgaaggcatatgatgcttattcttcaaagagagttgacaaagtacgtttgtacgaagtgtacaaccactacctccact 22802470  T
Q  196 actcagtttgtgtctctgct 215  Q
    |||| |||| ||||||||||    
T  22802469 actctgttt-tgtctctgct 22802451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 25829268 - 25829124
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||         |||||||||||| || ||  || |||||||||| |||||  ||||||    
T  25829268 attgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtac 25829169  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  25829168 gaagtgtacaaccactatctccactactcattttgtgtctctgct 25829124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 30667074 - 30666979
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  | ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30667074 aaggcattggatgcttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 30666979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 31327852 - 31328075
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttcta-ggatacaaactcgcctaaa-attgcagaagactggaaaa 98  Q
    ||||||||||||||||||||||||||||||| |||  |||| ||| ||| |  | ||| | |||| |||||||||||||| ||||||||||||| || ||    
T  31327852 atcaccagaagctgcagttcatcaggagatgcaacttaaag-tttcaaaaagttgttcaacggattcaaactcgcctaaagattgcagaagactagagaa 31327950  T
Q  99 gtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    ||  ||||||| |||||||| | ||         |||||||||||| || |||||| |||||||||| |||| ||| | ||||||||||||||||||| |    
T  31327951 gtgaagcaacgactattttggagggttttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtatgttcgaacgaagtgtacaaccactacc 31328050  T
Q  190 tccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||| ||||||||||    
T  31328051 tccactactctgttt-tgtctctgct 31328075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 31334573 - 31334796
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttcta-ggatacaaactcgcctaaa-attgcagaagactggaaaa 98  Q
    ||||||||||||||||||||||||||||||| |||  |||| ||| ||| |  | ||| | |||| |||||||||||||| ||||||||||||| || ||    
T  31334573 atcaccagaagctgcagttcatcaggagatgcaacttaaag-tttcaaaaagttgttcaacggattcaaactcgcctaaagattgcagaagactagagaa 31334671  T
Q  99 gtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    ||  ||||||| |||||||| | ||         |||||||||||| || |||||| |||||||||| |||| ||| | ||||||||||||||||||| |    
T  31334672 gtgaagcaacgactattttggagggttttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtatgttcgaacgaagtgtacaaccactacc 31334771  T
Q  190 tccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||| ||||||||||    
T  31334772 tccactactctgttt-tgtctctgct 31334796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 10009768 - 10009860
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || | ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10009768 gcattggatgcttgttctttgaagaacgttgacatagtacaattgtacgaaatgtacaaccactatctccactactcagtttgtgtctctgct 10009860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 25037277 - 25037369
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| || || ||  ||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25037277 gcattggatgtttgttctttgaaaagcgttgacaaagtacaattgttcgaagtgtacaaccactatctccactactcagtttgtgtctctgct 25037369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 25041384 - 25041476
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| || || ||  ||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25041384 gcattggatgtttgttctttgaaaagcgttgacaaagtacaattgttcgaagtgtacaaccactatctccactactcagtttgtgtctctgct 25041476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 28701116 - 28701339
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| | |||| |||  || ||||  |||| |||||  ||| || ||| |||| || || ||||||||||||||||||||    
T  28701116 atcaccagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctgtttaatag-attcaacctcgtcttaagattgcagaagactggaaaag 28701214  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    || |||||| | ||||||||||||         |||||||||||| || ||||||  ||||||||| |||| |||||||||||||||||||||| || ||    
T  28701215 taaagcaacagatattttgaaaggatttgaaggcattggatgcttgttcttcaaagggcgttgacaaagtaagtttgtacgaagtgtacaaccattacct 28701314  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||  |||| |||| |||||    
T  28701315 ccactactttgtttttgtccctgct 28701339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 31800905 - 31800997
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| ||  | |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  31800905 gcattggatgtttgatcttcaaagagcgttgacaaagtacatttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 31800997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 20568765 - 20568860
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  20568765 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatccccactactcagtttgtgtatctgct 20568860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 22188117 - 22188212
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||| ||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22188117 aaggcattggatgcttgttctttgaagagcgttaacaaagtataattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 22188212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 22455005 - 22455100
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  | ||  ||||||||||||| |||||  |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  22455005 aaggcattggatgcttgctttttgaaaagcgttgacaaagtacaattgtacgaagtgtacaaccagtacctccactactcagtttgtgtctctgct 22455100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 21537264 - 21537358
Alignment:
Q  121 aggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||  | ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21537264 aggcattggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctttgct 21537358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 6392768 - 6392624
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgta 169  Q
    |||||||||||||||||||||  ||||||| |||||||||||||         |||||||||||| ||  |||||| |||||||||| ||||||||||||    
T  6392768 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgta 6392669  T
Q  170 cgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||  ||||||||| ||||||||||| |||| ||||||||||    
T  6392668 cgaagtgcgcaaccactacctccactactctgttt-tgtctctgct 6392624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 22317679 - 22317583
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| || |||||| |||||||||| |||||  ||||||||||| ||||||||||| |||||||| ||||||| | ||||||||    
T  22317679 aaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtatacaaccactacctccactattcagtttttatctctgct 22317583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 39037684 - 39037752
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39037684 agcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcagtttgtgtctctgct 39037752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 40782535 - 40782467
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  40782535 agcgttgacatagtacaattgtacgaagtgtacaaccactatctccaatacttagtttgtgtctctgct 40782467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 28140638 - 28140729
Alignment:
Q  124 cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||| || ||  || ||||||||||||||||  |||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  28140638 cattggatgcttgttctttgaagagcgttgacatagtacaattgtacaaagtgtaccatcactatctccactactcagtttgtgtctctgct 28140729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 9015388 - 9015478
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| ||  || |||||||||| |||||  |||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  9015388 gcattggatgcttattctttgaagagcgttgacaaagtacaattgtacg--gtgtacaaccactatctccactactcagtttgtatctctgct 9015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 24779398 - 24779333
Alignment:
Q  150 gttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||  ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  24779398 gttgacatagtacaattgtatgaagtgtataaccactatctccactactcagtttgtgtctctgct 24779333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 30557339 - 30557415
Alignment:
Q  124 cattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||||||| ||  |||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  30557339 cattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactc 30557415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 30621274 - 30621210
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctc 211  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  30621274 agcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactcagtttgtgtctc 30621210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 30623895 - 30623831
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctc 211  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  30623895 agcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactcagtttgtgtctc 30623831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 45087150 - 45087266
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| |||||||||||||         |||| |||||||||| |  ||| |||||||||| |||||||||||||    
T  45087150 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaatgcattagatgcttattctcaaaagagcgttgacaaagtacgtttgtac 45087249  T
Q  171 gaagtgtacaaccacta 187  Q
    |||||||||||||||||    
T  45087250 gaagtgtacaaccacta 45087266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 23184345 - 23184414
Alignment:
Q  146 aagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||| |||||  |||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  23184345 aagcgttgacaaagtacaattgtacgaagtgtagaaccactacctcctctactcagtttgtgtctctgct 23184414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 23595608 - 23595677
Alignment:
Q  146 aagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||| |||||  |||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  23595608 aagcgttgacaaagtacaattgtacgaagtgtagaaccactacctcctctactcagtttgtgtctctgct 23595677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 24576090 - 24576025
Alignment:
Q  150 gttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||| |||||  ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  24576090 gttgacaaagtacaattgtacgaagtgtacaaccactacctccactacttagtttgtgtctctgct 24576025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 20152001 - 20152117
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  |||||||| || |||||||||         |||||||||||| || |||||| |||||||||| |||||  ||||||    
T  20152001 attgcagaagactggaaaagtgaagcaacggttagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtac 20152100  T
Q  171 gaagtgtacaaccacta 187  Q
    |||||||||||||||||    
T  20152101 gaagtgtacaaccacta 20152117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 6574089 - 6574223
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgt-ttgta 169  Q
    |||||||||||||||||||||  ||||||| ||| |||||||||         ||||||||| || || |||||| |||||||||| |||||   |||||    
T  6574089 attgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaaattgta 6574188  T
Q  170 cgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||||||||||||| ||||||||||| ||||    
T  6574189 cgaagtgtacaaccactacctccactactctgttt 6574223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 25189456 - 25189391
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||| |||||  ||||||||| ||||||||||||| |||||||||||| |||||||||||    
T  25189456 agcgttgacaaagtacaattgtacgaaatgtacaaccactacctccactactcaatttgtgtctct 25189391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 22258231 - 22258191
Alignment:
Q  175 tgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22258231 tgtacaaccactatctccactactcagtttgtgtctctgct 22258191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 24850684 - 24850776
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || |||||||||| |||||   |||||||| |||||||||||||  ||||||||||||| ||||||||||||    
T  24850684 gcattggatgcttgttctttgaagagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgct 24850776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 38781484 - 38781388
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc-agtttgtgtctctgct 215  Q
    ||||||||| ||| || || |||||| |||||||||| |||||  |||||||||||||||||||||||  |||||||||| | ||| ||||||||||    
T  38781484 aaggcattgaatgattgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacatccactactctattttttgtctctgct 38781388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 41121765 - 41121829
Alignment:
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| |||||  |||| |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  41121765 ttgacaaagtacaattgtgcgaaatgtacaaccactacctccactactctgtttgtgtctctgct 41121829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 26619161 - 26619200
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  26619161 ttgtacgaagtgtacaaccactatctccactactctgttt 26619200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 19115123 - 19115089
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||||||||||||||||||||||||||||||    
T  19115123 ttgtacgaagtgtacaaccactatctccactactc 19115089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 44881207 - 44881173
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||||||||||||||||||||||||||||||    
T  44881207 ttgtacgaagtgtacaaccactatctccactactc 44881173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 19498010 - 19498048
Alignment:
Q  172 aagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  19498010 aagtgtacaaccactacctccactactctgtttgtgtct 19498048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 22272172 - 22272139
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactact 198  Q
    ||||| ||||||||||||||||||||||||||||    
T  22272172 ttgtaagaagtgtacaaccactatctccactact 22272139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 24814645 - 24814677
Alignment:
Q  167 gtacgaagtgtacaaccactatctccactactc 199  Q
    ||||||||||||||||||||| |||||||||||    
T  24814645 gtacgaagtgtacaaccactacctccactactc 24814677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 17398582 - 17398795
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||| ||||||||||||||| |||  |||||||  |||| ||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  17398582 atcaccagaagctgcggttcatcaggagatgcaacttaaagcttcaaaagttgttt-caaggattcaaactcgcctaaaattgcagaagactggaaaagt 17398680  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  17398681 atagcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactaactccactactct 17398780  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  17398781 gtttttgtctctgct 17398795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 3105323 - 3105540
Alignment:
Q  6 cagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagtatagc 105  Q
    |||||||||||||||||||||||||| |||  |||||||  |||| ||||| | ||||| |||||||| |||| |||||||||||||||||||||||  |    
T  3105323 cagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgttt-caaggattcaaactcgtctaagattgcagaagactggaaaagtattcc 3105421  T
Q  106 aacggctattttgaaaggc---------attggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccacta 196  Q
    ||||||||||||||||||          |||||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3105422 aacggctattttgaaaggattgaaaagtattggatggttattcttcaaagagcgttgacatagtatgtttgtacgaagtgtacaaccactatctccacta 3105521  T
Q  197 ctcagtttgtgtctctgct 215  Q
    ||| |||| ||||||||||    
T  3105522 ctctgtttttgtctctgct 3105540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 40860871 - 40860657
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||||| ||||||||||||||||| |||  |||| ||  |||| ||||| | ||||    |||||||||| ||||||||||||||||||||||    
T  40860871 atcaccagaagctacagttcatcaggagatggaacttaaagtttcaaaagttgttt-caaggactataactcgcctagaaattgcagaagactggaaaag 40860773  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| |||| ||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| || ||||||||||||||  ||||||||||    
T  40860772 tatggcaatggctaatttgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtatgatgtgtacaaccactacttccactactc 40860673  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  40860672 tgtttttgtctctgct 40860657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 78 - 215
Target Start/End: Complemental strand, 22190973 - 22190836
Alignment:
Q  78 aaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgt 177  Q
    ||||||||||||||||||||||||| |||||  ||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  22190973 aaattgcagaagactggaaaagtatggcaacaactattttgaaatgcattggatgctgattcttcaaagagcgttgacatagtacgtttgtacgaagtgt 22190874  T
Q  178 acaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||  |||||||||| |||| ||||||||||    
T  22190873 acaaccactacttccactactctgtttttgtctctgct 22190836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 6517698 - 6517475
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| || |||||||||||||||| |||  |||||||  |||| | |||   ||||| |||||||| ||||| ||||||||||||||||||||    
T  6517698 atcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttatttaa-aggattcaaactcgtctaaagattgcagaagactggaaaag 6517600  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||||||||| |||||||| ||||         |||  |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6517599 tatagcaacgactattttggaaggattggaaagcatgagatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 6517500  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||||||||    
T  6517499 ccactactctgtttttgtctctgct 6517475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 20977658 - 20977447
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcct-aaaattgcagaagactggaaaagt 100  Q
    |||||||||||||||| ||||||| ||||  |||  |||||||  |||| ||||| | ||||| ||| ||||||  |||||||||||||||| | |||||    
T  20977658 tcaccagaagctgcagatcatcagaagatc-aacataaagcttcaaaagttgttt-caaggattcaagctcgccagaaaattgcagaagacttggaaagt 20977561  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
     || ||||||||||||||||| ||||||||||||||||  ||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||     
T  20977560 -taacaacggctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactct 20977462  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  20977461 gtttttgtctctgct 20977447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 15475050 - 15475248
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||| ||||||||||||| ||  ||| ||||| ||  |||| ||||| | |||||   |||||| ||||| ||||||||||| | ||||||    
T  15475050 atcaccagaagctacagttcatcaggaaattgaactcaaagtttcaaaagctgttt-caaggattttaactcgtctaaagattgcagaagagtagaaaag 15475148  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| |||||||||||||||||| |||||||||||||| |  ||||| |||||||||||||||||||| ||||||||||||||||| ||  ||||||||||    
T  15475149 tatggcaacggctattttgaaatgcattggatgcttactcctcaaagagcgttgacatagtacgtttatacgaagtgtacaaccaatacttccactactc 15475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 195
Target Start/End: Complemental strand, 16940169 - 16940026
Alignment:
Q  61 ggatacaaactcgcctaaaattgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgt 151  Q
    |||| |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||         ||||| ||||||||| |||||  |||||    
T  16940169 ggattcaaactcgtctaagattgcagaagactggaaaagtatagcaacgactattttgaaaggattgaaaggcattgaatgcttattcttcaaggagcgt 16940070  T
Q  152 tgacatagtacgtttgtacgaagtgtacaaccactatctccact 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16940069 tgacatagtacgtttgtacgaagtgtacaaccactatctccact 16940026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 215
Target Start/End: Original strand, 9751513 - 9751661
Alignment:
Q  68 aactcgcctaaaa-ttgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgttt 166  Q
    ||||||||||||| || | ||||||||||| ||| | |||||||||| ||||||| |||||||||||| ||| |||||| ||||||||||||||| ||||    
T  9751513 aactcgcctaaaaattacggaagactggaagagtgtggcaacggctagtttgaaatgcattggatgctaattcttcaaagagcgttgacatagtatgttt 9751612  T
Q  167 gtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    | |||||||||||||||||||  |||||||||| |||| ||||||||||    
T  9751613 gcacgaagtgtacaaccactacttccactactctgtttttgtctctgct 9751661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 10693064 - 10692841
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||| |||||    |||| |||||||| ||||| ||||||||||||||||||||    
T  10693064 atcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaac-ggattcaaactcgtctaaagattgcagaagactggaaaag 10692966  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||  |||||||||||||         |||||||||||| || |||||| |||||| ||| |||||||||||| ||||||||||||||||| ||    
T  10692965 tgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtatgaagtgtacaaccactacct 10692866  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||||||||    
T  10692865 ccactactctgtttttgtctctgct 10692841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 10906830 - 10906607
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||| |||||    |||| |||||||| ||||| ||||||||||||||||||||    
T  10906830 atcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaac-ggattcaaactcgtctaaagattgcagaagactggaaaag 10906732  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||  |||||||||||||         |||||||||||| || |||||| |||||| ||| |||||||||||| ||||||||||||||||| ||    
T  10906731 tgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtatgaagtgtacaaccactacct 10906632  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||||||||    
T  10906631 ccactactctgtttttgtctctgct 10906607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 27188548 - 27188748
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcct-aaaattgcagaagactggaaaagt 100  Q
    |||||||||||||||| ||||||| ||||  |||| |||||||  |||| ||||| | ||||| ||| ||||||  |||||||||||||||| | |||||    
T  27188548 tcaccagaagctgcagatcatcagaagatc-aacctaaagcttcaaaagttgttt-caaggattcaagctcgccagaaaattgcagaagacttggaaagt 27188645  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
     || ||||| ||||||||||| ||||||||||||||||  ||||  |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||     
T  27188646 -taacaacgactattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtataaccactatctgcactactct 27188744  T
Q  201 gttt 204  Q
    ||||    
T  27188745 gttt 27188748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 39419642 - 39419855
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||| ||  ||| ||||| ||  |||| ||||| | ||||  | |||||||||| ||||| || ||||||| || ||    
T  39419642 atcaccagaagctgcagttcatcaggaaattgaactcaaagtttcaaaagctgttt-caaggactctaactcgcctagaaattacaaaagactgaaagag 39419740  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    | | |||||||||| |||| || ||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||  |||| |||||    
T  39419741 tgtggcaacggctagtttggaatgcatttgatgctaattcttcaaaa-gcgttgacatagtacgtttgtacgaagtgtacaaccactacttccattactc 39419839  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  39419840 tgtttttgtctctgct 39419855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 9141046 - 9140902
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||         |||||||||||| || ||  || ||||||||||||||||  ||||||    
T  9141046 attgtagaagactggaaaagtaaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtac 9140947  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  9140946 gaagtgtacaaccactatcttcactactcagtttgtgtctctgct 9140902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 37985638 - 37985733
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37985638 aaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 37985733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 55380372 - 55380280
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55380372 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 55380280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 38514007 - 38513868
Alignment:
Q  76 taaaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagt 175  Q
    |||||||  |||||||||||| ||| |  ||||||||| ||| ||| |||||||||| | ||| |||||| ||||||||||||||||| |||||||||||    
T  38514007 taaaattaaagaagactggaagagtgtgacaacggctagtttaaaatgcattggatgttaattcttcaaagagcgttgacatagtacgattgtacgaagt 38513908  T
Q  176 gtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||  | |||||||| |||| ||||||||||    
T  38513907 gtacaaccactactttcactactctgtttttgtctctgct 38513868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 54680141 - 54679931
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| |||||  | |    |||||||| ||||  ||||||||||||||||||||    
T  54680141 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaatggt---caaactcgtctaatgattgcagaagactggaaaag 54680045  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||  |||||||||||||         ||||||||| || || |||||| ||| |||||| |||||||||||||||||||||||||||||| ||    
T  54680044 tgaagcaacaactattttgaaaggatttgaaggcattggatgtttgttcttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacct 54679945  T
Q  191 ccactactcagttt 204  Q
    ||||||||| ||||    
T  54679944 ccactactctgttt 54679931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 3395648 - 3395580
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3395648 agcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 3395580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 19884836 - 19884692
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| ||| |||||||||         |||||||||||| || |||||| |||||||||| |||||  ||||||    
T  19884836 attgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtac 19884737  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||| || |||| ||||||||||    
T  19884736 gaagtgtacaaccactatctccactaatctgtttttgtctctgct 19884692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 12601186 - 12601099
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtg 207  Q
    |||||||||||||||| || ||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  12601186 aaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtg 12601099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 25651130 - 25651224
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||| ||||||||| |||||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||| ||||||||||    
T  25651130 aaggcattgaatgcttattcttcaaagagcgttgacgtagtacgtttgtacaaagtgtacaaccactacctccactactctgttt-tgtctctgct 25651224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 37435561 - 37435656
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||||||  |||| ||||||||||    
T  37435561 aaggcattggatgcttgttcttcaaagagcgttgacatagtactattgtacgaagtgtacaaccactacctccactactttgtttttgtctctgct 37435656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 29121504 - 29121362
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||| ||||||  ||||||| |||||||||||||         || ||||||||| || || ||| |||||||||| |||||||||||||    
T  29121504 attgcagaagactgaaaaagtgaagcaacgactattttgaaaggatttgaaggcactggatgcttgttctttaaagagcgttgacaaagtacgtttgtac 29121405  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctg 213  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||    
T  29121404 gaagtgtacaaccactacctccactactctgtttttgtctctg 29121362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 8105772 - 8105628
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgta 169  Q
    ||||||||||||||||||| |  |||||||||||||||||||||         |||||||||||| ||  |||||| |||||||||| ||||||||||||    
T  8105772 attgcagaagactggaaaattgaagcaacggctattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgta 8105673  T
Q  170 cgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||||||    
T  8105672 cgaaatgtacaaccactacctccactactctgttt-tgtctctgct 8105628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 14904333 - 14904477
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| | |||||||||||         ||||||||||||||| ||  || ||||||||||||||||  ||||||    
T  14904333 attgcagaagactggaaaagtgaagcaacgtccattttgaaaggatttgaagacattggatgcttattctttgaagagcgttgacatagtacaattgtac 14904432  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||  ||||||| ||||||||| ||||||||||||||||||||    
T  14904433 gaagtaaacaaccattatctccaccactcagtttgtgtctctgct 14904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 19621114 - 19621182
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19621114 agcgttgacatagtacaattgtacgaagtgtacaaccactatctccactattcagtttgtgtctctgct 19621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 10073020 - 10072925
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||   |||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  10073020 aaggcattggaggcttgttattcaaagagcgttgacaaagtacaaatgtacgaagtgtacaaccactatctccactactatgtttttgtctctgct 10072925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 12811204 - 12811296
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |   || |||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12811204 aaggcattggatgcttgttct---aatagcgttgacaaagtaaaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 12811296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 19666427 - 19666362
Alignment:
Q  150 gttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19666427 gttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 19666362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 56532958 - 56533182
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||| ||||||||||| ||  ||||||||  || ||||  |||| |||||| | |||| ||| |||| ||||  |||||||||||||| ||||     
T  56532958 atcaccagaaactgcagttcattagaggatgtaacttaaggcttcaaaagctgttttatgggattcaacctcgtctaaggattgcagaagactgaaaaaa 56533057  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    |  |||||||||||||||||||||         |||| |||| || ||  |||||| |||||||||| ||||||||||||||||||||||||||||||      
T  56533058 tgaagcaacggctattttgaaaggatttgaatgcattagatgtttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactact 56533157  T
Q  190 tccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||| ||||||||||    
T  56533158 tccactactctgttt-tgtctctgct 56533182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 413215 - 413008
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||  |||  |||||||  |||| ||||   | |||| ||| |||| ||||  ||||||||||||| ||||||    
T  413215 atcaccagaagctgcagttcatcaggagattcaacttaaagcttcaaaagttgttcaat-ggattcaatctcgtctaagcattgcagaagactcgaaaag 413117  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||||||| |||||||||         ||||| ||| || || |||||| |||||||||| |||||| ||||||||||||||||||||||  ||    
T  413116 tgaagcaacggctaatttgaaaggatttgaaggcattgaatgtttgttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactgcct 413017  T
Q  191 ccactactc 199  Q
    |||||||||    
T  413016 ccactactc 413008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 29680521 - 29680665
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||         |||||||||||| || ||  || |||||||||| |||||  ||||||    
T  29680521 attgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtac 29680620  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||    
T  29680621 gaagtgtacaatcattatctccactactcagtatgtgtctctgct 29680665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 40846157 - 40846089
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40846157 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtatctctgct 40846089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 19911909 - 19912002
Alignment:
Q  123 gcattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| ||  ||| |||||||||||||||   |||||| |||||||||||||||| ||||||||||||||||||| |||||||    
T  19911909 gcattggatgcttattctttgaaagagcgttgacatagtataattgtacaaagtgtacaaccactacctccactactcagtttgtgcctctgct 19912002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 3499560 - 3499745
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaa--ttgcagaagactggaaaag 99  Q
    |||||||||||||||| ||||||| ||||  |||| | |||||  |||| ||||| | ||||| ||| ||| || ||||  || ||||||||||||  ||    
T  3499560 tcaccagaagctgcagatcatcagaagatc-aacctagagcttcaaaagctgttt-caaggattcaagctcaccaaaaagattacagaagactggaggag 3499657  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccacta 187  Q
    |||  |||||||||  ||||||  |||||||||||  || |||||  |||||||||||||||| ||||||||||||||||||||||||    
T  3499658 tatgacaacggctagattgaaatacattggatgctatttcttcaatgagcgttgacatagtacatttgtacgaagtgtacaaccacta 3499745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 16853585 - 16853493
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| ||  ||||| |||||||||| ||||| | |||| ||||||||||||||||| ||||||||||| |||| ||||||||||    
T  16853585 gcattggatgcttgttcctcaaagagcgttgacaaagtacatctgtatgaagtgtacaaccactacctccactactctgtttttgtctctgct 16853493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 22675546 - 22675630
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||| ||||||| || |||||| |||||||||| |||||  |||||| |||||||||||||||| ||||||||||||||||    
T  22675546 aaggcatttgatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactactcagttt 22675630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 45833476 - 45833384
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || |||||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||  |||||||||    
T  45833476 gcattggatgctttttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgttttggtctctgct 45833384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 16632525 - 16632430
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||| ||| || ||  || |||||||||| |||||  ||||||||||||||||||||||| |||||| | ||||||||||||||||||    
T  16632525 aaggcattggattcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccaccaatcagtttgtgtctctgct 16632430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 23750562 - 23750512
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23750562 ttgtacgaagtgtacaaccattatctccactactcagtttgtgtctctgct 23750512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 3483855 - 3483739
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| |||||||||||||         ||||||||||||||| |||||| |||||||||| |||||  ||||||    
T  3483855 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacaattgtac 3483756  T
Q  171 gaagtgtacaaccacta 187  Q
    |||| | ||||||||||    
T  3483755 gaagcgcacaaccacta 3483739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 6641742 - 6641674
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  6641742 agcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttatgtctctgct 6641674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 14604936 - 14605028
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||| ||||    
T  14604936 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctatgct 14605028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 13576140 - 13576235
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| ||||||| || |||||| ||||||||||||||||   ||||||||||||| ||||||||  |||||| ||| |||| ||||||||||    
T  13576140 aaggcattagatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccactacatccactgctctgtttttgtctctgct 13576235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 14153980 - 14154115
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgt-ttgtacgaagtgta 178  Q
    ||||||||||||| || || |  || |||||  |||||||||| ||||||||||||||  |||||| | |||||| || ||||   ||||||||||||||    
T  14153980 attgcagaagactagagaattggagtaacggtcattttgaaag-cattggatgcttatacttcaaagaacgttgatattgtacaacttgtacgaagtgta 14154078  T
Q  179 caaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||  |||||||||||| |||| ||||||||||    
T  14154079 caaccaccttctccactactctgtttttgtctctgct 14154115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 1672454 - 1672395
Alignment:
Q  140 ttcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||| | |||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  1672454 ttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactc 1672395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 1674929 - 1674870
Alignment:
Q  140 ttcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||| | |||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  1674929 ttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactc 1674870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 17700708 - 17700835
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcct-aaaattgcagaagactggaaaagt 100  Q
    |||||||||||||||| ||||||| ||||  |||| |||||||  |||| ||||| | ||||| ||| ||||||  |||||||||||||||| | |||||    
T  17700708 tcaccagaagctgcagatcatcagaagatc-aacctaaagcttcaaaagttgttt-caaggattcaagctcgccagaaaattgcagaagacttggaaagt 17700805  T
Q  101 atagcaacggctattttgaaaggcattggat 131  Q
     || ||||||||||||||||| |||||||||    
T  17700806 -taacaacggctattttgaaaagcattggat 17700835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 212
Target Start/End: Complemental strand, 56034708 - 56034567
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| |||||||||||         ||||||||||| || || |||||| |||||||||| |||||  ||||      
T  56034708 attgcagaagactggaagagtgaagcaacgactattttgaaataatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtct 56034609  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
     || |||||||| ||||||||||||||||| | |||||||||    
T  56034608 aaaatgtacaactactatctccactactcaatatgtgtctct 56034567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 55731992 - 55731870
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaa-aattgcagaagactggaaaag 99  Q
    |||||| |||||||||||||||||||||||| |||  ||| |||  |||| |||||  | |||| |||||||| |||| ||||||| ||||||||| | |    
T  55731992 atcaccggaagctgcagttcatcaggagatgcaacttaaaacttcaaaagttgtttaat-ggattcaaactcgtctaacaattgcaaaagactggagagg 55731894  T
Q  100 tatagcaacggctattttgaaagg 123  Q
    || | ||||| |||||||||||||    
T  55731893 taaatcaacgactattttgaaagg 55731870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 8685514 - 8685548
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||||||||||||||||||||||||||||||    
T  8685514 ttgtacgaagtgtacaaccactatctccactactc 8685548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14571237 - 14571161
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaa 78  Q
    ||||||||||| ||||||||||||||||||| |||  |||||||  |||| || |||| ||||| |||||||||||||    
T  14571237 atcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttg-tttcaaggattcaaactcgcctaa 14571161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 17247329 - 17247245
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    ||||||||| ||| || || |||||| | | |||||| |||||  ||||||||||||||||||||||  ||||||||||| ||||    
T  17247329 aaggcattgaatgtttgttcttcaaagaacattgacaaagtacaattgtacgaagtgtacaaccactgcctccactactctgttt 17247245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13576012 - 13576055
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctt 44  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  13576012 atcaccagaagctgcagttcatcaggagatgcaacataaagctt 13576055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 17540435 - 17540396
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  17540435 ttgtacgaagtgtacaaccattatctccactactctgttt 17540396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 17247456 - 17247426
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatg 31  Q
    |||||||||||||||||||||||||||||||    
T  17247456 atcaccagaagctgcagttcatcaggagatg 17247426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 17788118 - 17788152
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||| ||||||||||||||||||||||||||    
T  17788118 ttgtacgatgtgtacaaccactatctccactactc 17788152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 46089198 - 46088984
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaa-ttgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| |||||| |||  |||||||  |||| ||||| | ||||| ||||||||||||||| |||||||||||||||||||    
T  46089198 atcaccagaagctgcagttcatcatgagatgcaacttaaagcttcaaaagctgttt-caaggattcaaactcgcctaaaaattgcagaagactggaaaag 46089100  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46089099 tatggcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 46089000  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  46088999 tgtttttgtctctgct 46088984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 10251194 - 10250984
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| |||||   ||||| |||||||| |||| |||||||||||||||||||||    
T  10251194 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaa-aggattcaaactcgtctaagattgcagaagactggaaaagt 10251096  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    ||| ||||||||| |||| ||||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  10251095 ataacaacggctaatttggaaggcattggatgcttattcttcaaagagttttgacatagtacgtttgtacgaagtgtacaaccattatctccactactct 10250996  T
Q  201 gtttgtgtctct 212  Q
    |||| |||||||    
T  10250995 gtttttgtctct 10250984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21703031 - 21702809
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||  ||||| | ||||| |||||||| |||| ||||||||||||| |||||||    
T  21703031 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaatttgttt-caaggattcaaactcgtctaagattgcagaagacttgaaaagt 21702933  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    |||||||||||||||||||||||         ||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21702932 atagcaacggctattttgaaaggattgaagggcattgaatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 21702833  T
Q  192 cactactcagtttgtgtctctgct 215  Q
    |||||||| |||| ||||||||||    
T  21702832 cactactctgtttttgtctctgct 21702809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21204793 - 21204997
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| |||||| |||  |||| ||| |||  |  |||| ||||  | |||||||||| ||||||||||||||||||||||    
T  21204793 atcaccagaagctgcagttcatcaagagatggaacttaaagtttttaaaagttgtttcaaggactctaactcgcctagaaattgcagaagactggaaaag 21204892  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| |||||||||||||||||| |||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  21204893 tatggcaacggctattttgaaatgcattggatgttaattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactc 21204992  T
Q  200 agttt 204  Q
     ||||    
T  21204993 tgttt 21204997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 21120934 - 21121149
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaa-gatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaa 98  Q
    ||||||||||||||||||||||||||||||| |||  |||| ||| ||| | ||||| | ||||  | ||||| |||| |||| ||||||||||||||||    
T  21120934 atcaccagaagctgcagttcatcaggagatggaacttaaagttttcaaaagctgttt-caaggactctaactcacctagaaatcgcagaagactggaaaa 21121032  T
Q  99 gtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
     ||| |||||| ||||| ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  21121033 atatggcaacgactattctgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgacgtgtacaaccactacttccactact 21121132  T
Q  199 cagtttgtgtctctgct 215  Q
    | |||| ||||||||||    
T  21121133 ctgtttttgtctctgct 21121149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 21135030 - 21135245
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||| ||||||||||||||||||| |||  |||| ||| |||  |  |||| ||||  | ||||| |||| ||||| |||||||||||||||     
T  21135030 atcaccagaagttgcagttcatcaggagatggaacttaaagttttcaaaagttgtttcaaggaatctaactcacctagaaattacagaagactggaaaaa 21135129  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| ||||| |||||| ||||| |||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  21135130 tatggcaacagctattctgaaatgcattggatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactaaatccactactc 21135229  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  21135230 tgtttttgtctctgct 21135245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 48570094 - 48570316
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    |||||||||||||| | |||||||||||||| |||  |||| ||  |||| |||||    |||| |||||||| |||| ||||||||||||| |||||||    
T  48570094 atcaccagaagctgtaattcatcaggagatgcaacttaaagtttcaaaagctgtttaac-ggattcaaactcgtctaagattgcagaagactagaaaagt 48570192  T
Q  101 atagcaacggctattttg---------aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    ||| ||||| ||||||||         |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48570193 ataacaacgactattttggaaggattaaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 48570292  T
Q  192 cactactcagtttgtgtctctgct 215  Q
    |||||||| |||| ||||||||||    
T  48570293 cactactctgtttttgtctctgct 48570316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 30572414 - 30572192
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||| ||||||||||||||||||  |||  |||||||  | || ||||| | ||||| |||||||| || | |||||||||||||||||||||    
T  30572414 atcaccagaagttgcagttcatcaggagatacaacttaaagcttcaatagctgttt-caaggattcaaactcgtctgagattgcagaagactggaaaagt 30572316  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    |||||||||||||||||||||||         ||||||||| ||||| ||  || ||||||||||||||||| |||||||||||||||||||||||||||    
T  30572315 atagcaacggctattttgaaaggattgaaaagcattggatgtttattcttagaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctc 30572216  T
Q  192 cactactcagtttgtgtctctgct 215  Q
    |||||||| |||| ||| ||||||    
T  30572215 cactactctgtttttgtttctgct 30572192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 37642457 - 37642243
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||| ||  ||| ||||| ||  |||| ||||| | ||||  | |||||||||| ||||| ||||||||||||| ||    
T  37642457 atcaccagaagctgcagttcatcaggaaattgaactcaaagtttcaaaagctgttt-caaggactctaactcgcctagaaattacagaagactggaagag 37642359  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    | | ||||| |||| ||||||| |||||||||||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  37642358 tgtggcaacagctagtttgaaatgcattggatgctaattcttcaaagagcgttgacatagtacgtttatacgaagtgtacaaccactacttccactactc 37642259  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  37642258 tgtttttgtctctgct 37642243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 21984805 - 21984607
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||| ||||||||||||||| | |||  ||||  |  |||| ||||| | ||||  | |||||||||| | ||||||||| ||||||||||    
T  21984805 atcaccagaagctacagttcatcaggagagggaacttaaagtgtcaaaagttgttt-caaggactctaactcgcctagatattgcagaacactggaaaag 21984707  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| | ||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  21984706 tatggaaacagctattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactc 21984607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 215
Target Start/End: Complemental strand, 23024987 - 23024783
Alignment:
Q  9 aagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagtatagcaac 108  Q
    ||||||||| ||||| | | ||| |||| |||||||  |||| ||||| | |||||  || ||||||  ||||||||||||||| | ||||| |||||||    
T  23024987 aagctgcaggtcatcggaaaatgcaacctaaagcttcaaaagctgttt-caaggatttaatctcgccagaaattgcagaagacttggaaagt-tagcaac 23024890  T
Q  109 ggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgt 208  Q
    | ||||||||||| ||||||||||||||||  ||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| |||    
T  23024889 gactattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactctgtttttgt 23024790  T
Q  209 ctctgct 215  Q
    |||||||    
T  23024789 ctctgct 23024783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 42284836 - 42284642
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||| ||||  |||  |||  ||  |||| ||||| | ||||  | |||||||||||| |||||||||||||||||||     
T  42284836 atcaccagaagctgcagttcatcagaagattgaacttaaattttcaaaagctgttt-caaggactctaactcgcctaaagattgcagaagactggaaaat 42284738  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccacta 196  Q
    | | ||| || ||||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42284737 tgtggca-cgactattttgaaatgcattggatgctttttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccacta 42284642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 25448487 - 25448651
Alignment:
Q  61 ggatacaaactcgcctaaa-attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcg 150  Q
    |||| |||||||| ||||| |||||||||||||||||||||  |||| || |||||||||||||         ||||||||||||||| |||||| ||||    
T  25448487 ggattcaaactcgtctaaagattgcagaagactggaaaagtgaagcagcgactattttgaaaggatttgaaggcattggatgcttattcttcaaagagcg 25448586  T
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  25448587 ttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 25448651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 19215818 - 19215607
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcct-aaaattgcagaagactggaaaagt 100  Q
    |||||||||||||||| ||||||| ||||  || | |||||||  |||| ||||| | ||||| ||| ||||||  |||||||||||||||| | |||||    
T  19215818 tcaccagaagctgcagatcatcagaagatc-aatctaaagcttcaaaagctgttt-caaggattcaagctcgccagaaaattgcagaagacttggaaagt 19215721  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
     || ||||||||||||||||| ||||| ||||||||||  ||||  ||||||||||||||  | |||||||||||||||||||||||||| ||||||||     
T  19215720 -taacaacggctattttgaaaagcatttgatgcttattcctcaaggagcgttgacatagtgtgattgtacgaagtgtacaaccactatctgcactactct 19215622  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  19215621 gtttttgtctctgct 19215607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 35040384 - 35040161
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||||| ||||||| | |||| |||  || ||||  |||| |||||  | |||| ||| |||| ||||| ||||||||||||| ||||||    
T  35040384 atcaccagaagctgcaattcatcatgggatgcaacttaaggcttcaaaagttgtttaat-ggatccaacctcgtctaaagattgcagaagactagaaaag 35040286  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    || ||||||| |||||||||||||         ||||||||||||  | |||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  35040285 taaagcaacgactattttgaaaggatttgaaagcattggatgcttgatcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 35040186  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||||||||    
T  35040185 ccactactctgtttttgtctctgct 35040161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 44821407 - 44821630
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaatt-gcagaagactggaaaag 99  Q
    ||||||| |||||| |||||||||||||||| |||  |||||||  |||| |||||   ||||| |||||||| ||||  || | ||||||||| |||||    
T  44821407 atcaccataagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaa-aggattcaaactcgtctaaggtttgtagaagactgaaaaag 44821505  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||||||||| |||||||| ||||         | ||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  44821506 tatagcaacgactattttggaaggatttgaaggctttgtatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaactactatct 44821605  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||||||||    
T  44821606 ccactactctgtttttgtctctgct 44821630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 2327301 - 2327525
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| |||||  ||| || |||||||| ||||| |||||||| ||||| |||||    
T  2327301 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatag-attcaaactcgtctaaagattgcagatgactgaaaaag 2327399  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    |  |||||   |||||||||||||         |||||||||||| ||  |||||| ||| |||||| |||||||||||||||||||||||||||||| |    
T  2327400 tgaagcaaaaactattttgaaaggattcgaacgcattggatgcttgttcctcaaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacc 2327499  T
Q  190 tccactactcagtttgtgtctctgct 215  Q
    |||||||||| | || ||||||||||    
T  2327500 tccactactctggttttgtctctgct 2327525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 22600123 - 22600267
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||| | ||||| |||||||||||||         |||||||||||| || |||||| |||||||||| |||||  ||||||    
T  22600123 attgcagaagactggaagagtaaaacaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtac 22600222  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  22600223 gaagtgtacaaccactatctccactactctgtttttgtctctgct 22600267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 28492394 - 28492489
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28492394 aaggcattggatgcttgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 28492489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 22201677 - 22201821
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||| ||||||| ||||||  |||||||||||||         |||||||||||| || |   || |||||||||| |||||  ||||||    
T  22201677 attgcagaagactgaaaaagtaaagcaacaactattttgaaaggatttgaaggcattggatgcttgttctatgaagagcgttgacaaagtacaattgtac 22201776  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22201777 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 22201821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 36134326 - 36134185
Alignment:
Q  82 tgcagaagactggaaaagtatagcaacggctattttgaaagg--------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaa 173  Q
    |||||||||||||||||||  ||||||  |||||||||||||        |||||||||||| || |||||| |||||||||| |||||  |||||||||    
T  36134326 tgcagaagactggaaaagtggagcaacaactattttgaaaggatttgaagcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaa 36134227  T
Q  174 gtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||| ||||||||||| |||| ||||||||||    
T  36134226 gtgtacaaccactacctccactactctgtttttgtctctgct 36134185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 33256341 - 33256436
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  ||  ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33256341 aaggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 33256436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 33276513 - 33276608
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  ||  ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33276513 aaggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 33276608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 1578006 - 1577862
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaag---------gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| ||||||||||||         ||||||||||||| || ||  || |||||||||| ||||   ||||||    
T  1578006 attgcagaagactggaagagtgaagcaacgactattttgaaagaatttgaaagcattggatgcttgttcttttaagagcgttgacaaagtataattgtac 1577907  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  1577906 taagtgtacaaccactatctccactactcagtttgtgtctctgct 1577862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 12284510 - 12284418
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  12284510 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaacactatctccactaatcagtttgtgtctctgct 12284418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 22427298 - 22427442
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| ||| |||||||||         |||||||||||| || || |||||||||||||| |||||  ||||||    
T  22427298 attgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttaaaaaagcgttgacaaagtacaattgtac 22427397  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| ||||||||||  |||| ||||||||||    
T  22427398 gaagtgtacaaccactacctccactactttgtttttgtctctgct 22427442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 1900436 - 1900340
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||| || |||||| |||||||||| |||||  ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||    
T  1900436 aaaggcattgaatgcttgttcttcaaagagcgttgacaaagtacagttgtaagaagtgtacaaccactacctccactactctgtttttgtctctgct 1900340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 20954466 - 20954558
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| ||||||| ||  || |||||||||| |||||  |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  20954466 gcattggaggcttattctttgaagagcgttgacaaagtacaattgtaccaagtgtacaaccactatctccactactcagtttgtttctctgct 20954558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 32785878 - 32786018
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| ||| |||||||||         |||||||||||| || || ||| |||||||||| |||||  ||||||    
T  32785878 attgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttaaaagagcgttgacaaagtacaattgtac 32785977  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctc 211  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  32785978 gaagtgtacaaccactatctccactactatgtttttgtctc 32786018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 38282657 - 38282562
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||| || |||||| |||||||||| |||||  ||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  38282657 aaaggcattgaatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagt-tacaaccactatctccactactctgtttttgtctctgct 38282562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 39200933 - 39201077
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||| || |||  ||||||||||| |||||||||         |||||||||||| || |||||| |||||||||| |||||  ||||||    
T  39200933 attgcagaagactgaaagagtgaagcaacggctagtttgaaaggatttgaagacattggatgcttgttcttcaaagagcgttgacaaagtacaattgtac 39201032  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| ||||||||||| |||| ||| ||||||    
T  39201033 gaagtgtacaaccactacctccactactctgtttttgtttctgct 39201077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 30893155 - 30893090
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  30893155 agcgctgacatagtacaattgtacgaagtgtacaaccactatctccactactaagtttgtgtctct 30893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 10757480 - 10757416
Alignment:
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10757480 ttgacaaagtacaattgtacgaagtgtacaaccactatcttcactactcagtttgtgtctctgct 10757416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 21191855 - 21191947
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||||||||| || ||  || ||||||| || |||||  ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  21191855 aaggcattggatgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttgtgtctct 21191947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 22464750 - 22464894
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| ||| |||||||         |||||||||||||| || |||||| |||||||||| |||||   |||||    
T  22464750 attgcagaagactggaaaagtgaagcaacgactaatttgaaatgatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtac 22464849  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||| |||||||||||  ||| ||||||||||    
T  22464850 gaagtgtacatccactacctccactactctatttttgtctctgct 22464894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 2268621 - 2268526
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||||| ||  ||||| |||||||||| |||||  ||||||||||||||||||||||| ||| ||||||| |||| ||||||||||    
T  2268621 aaggcattgaatgcttgttcgtcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcgactactctgtttttgtctctgct 2268526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 21028883 - 21028788
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  | ||  || |||| ||||| |||||  ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  21028883 aaggcattggatgcttgctttttgaagagcgctgacaaagtacaattgtatgaagtgtacagccactatctccactactcagtttgtgtctctgct 21028788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 29215887 - 29215792
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |||||| |||| | ||| |||||  ||||||||||||||||| ||||| ||||||||||| |||| ||||||||||    
T  29215887 aaggcattggatgcttgttcttcaaagagcgataacaaagtacaattgtacgaagtgtacaatcactagctccactactctgtttttgtctctgct 29215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 35401944 - 35401821
Alignment:
Q  84 cagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaag 174  Q
    |||||||||||||||||  ||||||| |||||||||||||         |||||||||||| || |||||| |||||||||| |||||  |||||| |||    
T  35401944 cagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacaaag 35401845  T
Q  175 tgtacaaccactatctccactact 198  Q
    ||||||||||||| ||||||||||    
T  35401844 tgtacaaccactacctccactact 35401821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 2834908 - 2834684
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||| ||||||| |||  |||||||  |||| ||||   | |||| ||| |||| ||||  ||||  |||||||| |||||    
T  2834908 atcaccagaagctgcagttcatcgggagatgcaacttaaagcttccaaagttgttcaat-ggattcaatctcgtctaagcattgttgaagactgaaaaag 2834810  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||||||| |||||||||         |||||||||||| || |||||| | |||||||| |||||| ||||||||| ||||||||||||  ||    
T  2834809 tgaagcaacggctaatttgaaaggatttgaaggcattggatgcttgttcttcaaagaacgttgacaaagtacgattgtacgaattgtacaaccactgcct 2834710  T
Q  191 ccactactcagtt-tgtgtctctgct 215  Q
    ||||||||| ||| | ||||||||||    
T  2834709 ccactactctgttctttgtctctgct 2834684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 7745083 - 7745159
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||||| |||||||||  |||||| |||||||||| ||||||||| ||| |||||||||||||||| |||||||||||    
T  7745083 gcatttgatgcttatccttcaaagagcgttgacaaagtacgtttatacaaagtgtacaaccactacctccactactc 7745159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 14263441 - 14263525
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||||||| ||| ||  ||||| ||||||| || || ||||||||||||||||||||||||||| ||||||||||| ||||    
T  14263441 aaggcattggatacttgttcctcaaagagcgttggcaaagcacgtttgtacgaagtgtacaaccactacctccactactctgttt 14263525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 22153920 - 22153852
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  22153920 agcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 22153852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 19717614 - 19717519
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||| |||||||| || ||  || |||||||||| |||||  |||||||||||||||||| |||| |||||| | ||||||||||||||||||    
T  19717614 aaggcatcggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactaactccacaaatcagtttgtgtctctgct 19717519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 16235239 - 16235381
Alignment:
Q  82 tgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacga 172  Q
    |||||||||||||||||||  ||||||| |||||||||||||         ||||| |||||| || | |||| || ||||||| |||||  ||||||||    
T  16235239 tgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattgaatgcttgttctccaaagagtgttgacaaagtacaattgtacga 16235338  T
Q  173 agtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||| |||||||||||  ||| ||||||||||    
T  16235339 agtgtacaacaactacctccactactccttttttgtctctgct 16235381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 12613831 - 12613899
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||| || |||||  ||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  12613831 agcgttggcaaagtacaattgtacgaagtgtacaaccactaccttcactactctgtttgtgtctctgct 12613899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 26702151 - 26702214
Alignment:
Q  152 tgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||| |||||  ||||||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  26702151 tgacaaagtacaattgtacgaagtgtacaaccactacctccactacttagtatgtgtctctgct 26702214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 48704294 - 48704199
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| ||||||||| || ||  || | |||||||| |||||  |||||||||||||||||||| | ||||||||||||| ||| ||||||||||    
T  48704294 aaggcactggatgcttgttctttgaagaacgttgacaaagtacaattgtacgaagtgtacaaccaatgtctccactactcaatttatgtctctgct 48704199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 2267179 - 2267087
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||| || || |||||| ||||||| || ||| |  ||||| ||||||||||||||||| ||||||||||  |||| |||||||    
T  2267179 aaggcattggatgtttgttcttcaaagagcgttgtcaaagtgcaattgtatgaagtgtacaaccactacctccactactatgtttttgtctct 2267087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 7309908 - 7309830
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||||||||||  || ||||||| ||||| || ||||||  ||||||||||||||||||||||| ||||| |||||    
T  7309908 aaggcattggatgctcgttcttcaaaa-gcgttaacgtagtacaattgtacgaagtgtacaaccactacctccaatactc 7309830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 34255467 - 34255585
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtac 179  Q
    ||||||||||||| | |||||  | ||||| ||| ||||||| |||||||||||||  |  ||||| ||||||||||| ||  || |||||||| |||||    
T  34255467 attgcagaagacttggaaagttga-caacgactagtttgaaaagcattggatgctttatcctcaaagagcgttgacattgtgagtatgtacgaactgtac 34255565  T
Q  180 aaccactatctccactactc 199  Q
    ||||||||  ||||||||||    
T  34255566 aaccactacttccactactc 34255585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 17024954 - 17025029
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccact 195  Q
    |||||||||||||||| || || ||| |||||||| | |  ||  ||||||||||||||||||||||| |||||||    
T  17024954 aaggcattggatgcttgttctttaaagagcgttgaaaaatgacaattgtacgaagtgtacaaccactacctccact 17025029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 17371085 - 17371042
Alignment:
Q  167 gtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||    
T  17371085 gtacgaagtgtacaaccactacctccactactctgtttttgtct 17371042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 23036521 - 23036595
Alignment:
Q  124 cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
    |||||||||||| || |||||| |||||  ||| || ||  ||||||||||||||||||||||| |||| |||||    
T  23036521 cattggatgcttgttcttcaaagagcgtcaacaaagaacaattgtacgaagtgtacaaccactacctcctctact 23036595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 18896632 - 18896665
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactact 198  Q
    ||||||||||||||||||||||| ||||||||||    
T  18896632 ttgtacgaagtgtacaaccactacctccactact 18896665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 2 - 210
Target Start/End: Original strand, 1658 - 1865
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagta 101  Q
    |||||||||||| ||||||||||||||||| |||  |||||||  |||| ||||| | ||||| ||||||||||||| ||||||||||||||||||||||    
T  1658 tcaccagaagctacagttcatcaggagatgcaacttaaagcttcaaaagttgttt-caaggattcaaactcgcctaacattgcagaagactggaaaagta 1756  T
Q  102 tagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcag 201  Q
    | |||||||||||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  1757 tggcaacggctattttgaaatgcattggatgcttattcttcaaagagcgttgacatattacgtttgtacgaagtgtacaaccactatctccactactctg 1856  T
Q  202 tttgtgtct 210  Q
    ||| |||||    
T  1857 tttttgtct 1865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 552 - 767
Alignment:
Q  6 cagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtatag 104  Q
    |||||| ||||||||||||||||||| |||  |||||||   ||| |||||  | |||| |||||||| ||||| |||||||||||||||||||||  ||    
T  552 cagaaggtgcagttcatcaggagatgcaacttaaagcttcagaagctgtttgat-ggattcaaactcgtctaaagattgcagaagactggaaaagtgaag 650  T
Q  105 caacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccact 195  Q
    ||||| |||||||||||||         |||||||||||| || |||||| |||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  651 caacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctccact 750  T
Q  196 actcagtttgtgtctct 212  Q
    |||| |||| |||||||    
T  751 actctgtttttgtctct 767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 2e-66; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 28464271 - 28464481
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||  |||  |||||||  |||| ||||| | ||||| |||||||| |||| |||||||||||||  ||||||    
T  28464271 atcaccagaagctgcagttcatcaggagatacaacttaaagcttcaaaagctgttt-caaggattcaaactcgtctaagattgcagaagactaaaaaagt 28464369  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  28464370 ataacaacggctattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctctactactct 28464469  T
Q  201 gtttgtgtctct 212  Q
    |||| |||||||    
T  28464470 gtttttgtctct 28464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 10848979 - 10848765
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaa-ttgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| |||||| |||  |||||||  |||| ||||| | ||||| ||||||||||||||| |||||||| ||||||||||    
T  10848979 atcaccagaagctgcagttcatcatgagatgcaacttaaagcttcaaaagttgttt-caaggattcaaactcgcctaaaaattgcagaaaactggaaaag 10848881  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| ||| | |||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  10848880 tatggcatcagctattttgaaaggcattagatgcttattcttcaaagagcgttgacataatacgtttgtacaaagtgtacaaccactatctccactactc 10848781  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  10848780 tgtttttgtctctgct 10848765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 3245364 - 3245583
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||  ||||| | ||||| |||||||| |||| |||||||||||||||||||||    
T  3245364 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttccaaaactgttt-caaggattcaaactcgtctaagattgcagaagactggaaaagt 3245462  T
Q  101 atagcaacggctattttga---------aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    |||||||||||||||||||         |||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3245463 atagcaacggctattttgaaagaattgaaaggcatttgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 3245562  T
Q  192 cactactcagtttgtgtctct 212  Q
    || ||||| |||| |||||||    
T  3245563 cagtactctgtttttgtctct 3245583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 25930087 - 25930301
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||||| |||||||||||||| |||  |||||||  |||| |||||   ||||| |||||||| ||||| |||||| |||||||||||||    
T  25930087 atcaccagaagctgcaattcatcaggagatgcaacttaaagcttcaaaagttgtttaa-aggattcaaactcgtctaaagattgcataagactggaaaag 25930185  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||| ||||||||| |||  ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  25930186 tataacaacggctaatttagaaggcattggatgcttatttttcaaagagcgttgacatagtacgtttgtacgaattgtacaaccactatctctactactc 25930285  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  25930286 tgtttttgtctctgct 25930301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 9089174 - 9088961
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| |||  |||| ||  |||| |||||   ||||  |||||||| |||  |||| ||||||||||||||||    
T  9089174 atcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaagctgtttaa-aggaatcaaactcgtctatgattgaagaagactggaaaagt 9089076  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    ||  ||||| |||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9089075 attacaacgactattttggaaggcattggatgctaattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactct 9088976  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  9088975 gtttttgtctctgct 9088961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 68 - 215
Target Start/End: Original strand, 35932003 - 35932151
Alignment:
Q  68 aactcgccta-aaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgttt 166  Q
    |||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||| |||||| || |||||||||||||||||    
T  35932003 aactcgcctagaaattgcagaagactggaaaagtatggcaacgactattttgaaacgcattggatgcttattcttcaaagagtgttgacatagtacgttt 35932102  T
Q  167 gtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||  |||||||||| |||| ||||||||||    
T  35932103 gtacgaagtgtacaaccactacttccactactctgtttttgtctctgct 35932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 35986163 - 35986361
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||| ||||||||||||||||||  |||  |||| ||  |||||||||| | ||||  | |||||||||||||||||||||||||||||||||    
T  35986163 atcaccagaagttgcagttcatcaggagattgaacttaaagtttcaaaagatgttt-caaggactctaactcgcctaaaattgcagaagactggaaaagt 35986261  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac-gaagtgtacaaccactatctccactactc 199  Q
     | |||||| ||||||||||| ||||||||||| |||| |||||| |||||||||||||||||| |||||  ||||||||||||||||  ||||||||||    
T  35986262 gtggcaacgactattttgaaatgcattggatgcctattcttcaaagagcgttgacatagtacgtctgtacaaaagtgtacaaccactacttccactactc 35986361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 29138330 - 29138551
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||| || |||||||||||||||| |||  |||| ||  |||| |||||   || || |||| ||| |||| |||||||||||||||||| ||    
T  29138330 atcaccagaagttgtagttcatcaggagatgcaacttaaagtttcaaaagctgtttaacag-attcaaaatcgtctaagattgcagaagactggaaa-gt 29138427  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    ||||||||  |||||||| ||||         ||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  29138428 atagcaacaactattttggaaggattagaaggcattggatgcttattcttcaaagagcgttgtcatagtacgtttgtacgaagtgtacaaccactatctc 29138527  T
Q  192 cactactcagtttgtgtctctgct 215  Q
    |||||||| |||||||||||||||    
T  29138528 cactactctgtttgtgtctctgct 29138551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 15517184 - 15516962
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttcta-ggatacaaactcgcctaaa-attgcagaagactggaaaa 98  Q
    ||||||||||| || |||||||||| ||||| |||  |||||||  |||| ||||  | | |||| |||||||| ||||| |||||||||||||||||||    
T  15517184 atcaccagaagttgtagttcatcagaagatgcaacttaaagcttcaaaagttgtt--caacggattcaaactcgtctaaagattgcagaagactggaaaa 15517087  T
Q  99 gtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    |||||||||||||||||||| ||||         ||||||||||||||| |||||| || |||| |||||||| |||||||||||||||||||||||| |    
T  15517086 gtatagcaacggctattttggaaggatttgaaggcattggatgcttattcttcaaagagtgttggcatagtacttttgtacgaagtgtacaaccactacc 15516987  T
Q  190 tccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||| ||||||||||    
T  15516986 tccactactctgttt-tgtctctgct 15516962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 28139755 - 28139599
Alignment:
Q  68 aactcgcctaaaattgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacata 158  Q
    |||||| |||| | || ||||||||| ||||||||||||||| |||||||||||||         ||||||||||||||| |||| | ||||||||||||    
T  28139755 aactcgtctaagaatgtagaagactgaaaaagtatagcaacgactattttgaaaggattgaaagacattggatgcttattcttcatagagcgttgacata 28139656  T
Q  159 gtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  28139655 gtatgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 28139599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 215
Target Start/End: Complemental strand, 30743189 - 30742973
Alignment:
Q  7 agaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtatagc 105  Q
    ||||| ||||||||||||||||||| |||  |||||||  |||| |||||  | |||| |||||||| ||||| |||||||||||||||||| | | |||    
T  30743189 agaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaat-ggattcaaactcgtctaaagattgcagaagactggaaaggcaaagc 30743091  T
Q  106 aacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccacta 196  Q
    ||||  ||||||||||||         ||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  30743090 aacgattattttgaaaggatttgaaggcattggatgtttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccacta 30742991  T
Q  197 ctcagtttgtgtctctgct 215  Q
    ||| |||| ||||||||||    
T  30742990 ctctgttt-tgtctctgct 30742973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 4887158 - 4887014
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||| ||||||||||||||||||||||| |||||||||||         |||||||||||||| || |||||| |||||||||| ||||||| |||||    
T  4887158 attgcaaaagactggaaaagtatagcaacgactattttgaaaagatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtgtgtac 4887059  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||    
T  4887058 gaagtgtacaaccactacctccactactctgtttttgtctctgct 4887014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 26759364 - 26759157
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| || |||||||||||||||| |||  |||||||  |||| |||||    |||| |||| ||||||||| ||||||||||||||||||||    
T  26759364 atcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaac-ggattcaaattcgcctaaagattgcagaagactggaaaag 26759266  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||| ||||| |||||||| ||||         ||||||||||||||| |||||| |||| ||| |||||| ||||||||||||||||||||||||| ||    
T  26759265 tataacaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgctgaaatagtaagtttgtacgaagtgtacaaccactacct 26759166  T
Q  191 ccactactc 199  Q
    |||||||||    
T  26759165 ccactactc 26759157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 30115883 - 30115982
Alignment:
Q  116 ttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||| |||||| |||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  30115883 ttgaagggcatttgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaaatgtacaaccactatctccactactctgtttttgtctctgct 30115982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 11994103 - 11993880
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttcta-ggatacaaactcgcctaaa-attgcagaagactggaaaa 98  Q
    |||||||||||||| |||||||||||||||| |||  |||| ||  |||||||||  | | |||| |||||||| ||||  ||||||||||||||||| |    
T  11994103 atcaccagaagctgtagttcatcaggagatgcaacttaaagtttcaaaagatgtt--caacggattcaaactcgtctaaggattgcagaagactggaata 11994006  T
Q  99 gtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    ||  ||||||||||| |||||| ||         |||||||||||| || |||||| |||||||||| ||||||| ||||||||||||||||||||||      
T  11994005 gtgaagcaacggctaatttgaagggatttgaaagcattggatgcttgttcttcaaagagcgttgacaaagtacgtatgtacgaagtgtacaaccactact 11993906  T
Q  190 tccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||| ||||||||||    
T  11993905 tccactactctgtttttgtctctgct 11993880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 14086462 - 14086684
Alignment:
Q  4 accagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtat 102  Q
    ||||||||||||||||||||||  |||| |||  || ||||  |||| |||||  | |||| ||| |||| ||||  |||||||||||||||||||||      
T  14086462 accagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgggattcaacctcgtctaaggattgcagaagactggaaaagtga 14086561  T
Q  103 agcaacggctattttgaa---------aggcattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatctcc 192  Q
    ||||||||||||||||||         | ||||||||||||| ||  |||||| |||||||||| |||||||||||||||||||||||||| ||| ||||    
T  14086562 agcaacggctattttgaagtgatttgaatgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccgctacctcc 14086661  T
Q  193 actactcagtttgtgtctctgct 215  Q
    ||||||| |||| ||||||||||    
T  14086662 actactctgtttttgtctctgct 14086684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 21660352 - 21660220
Alignment:
Q  68 aactcgcctaaa-attgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgttt 166  Q
    |||||| ||||| |||||||||||| |||||||||| |||||  ||||||| ||| |||||||||||||| |  ||||| | ||||||||||||| ||||    
T  21660352 aactcgtctaaagattgcagaagaccggaaaagtatggcaacaactattttcaaatgcattggatgcttagtcctcaaagatcgttgacatagtatgttt 21660253  T
Q  167 gtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||||||||||||||||  ||||||||||    
T  21660252 gtacgaagtgtacaaccactacttccactactc 21660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 23413027 - 23413119
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23413027 gcattggatgcttgttttttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 23413119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 26765649 - 26765501
Alignment:
Q  66 caaactcgcctaaa-attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgac 155  Q
    |||| ||||||||| |||||||||||||||||||||||||||||  |||||||| ||||         ||||||||||||||| |||||| |||| |||     
T  26765649 caaattcgcctaaagattgcagaagactggaaaagtatagcaacaactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgctgaa 26765550  T
Q  156 atagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  26765549 atagtacgtttgtacgaagtgtacaaccactgcctccactactctgttt 26765501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 41566435 - 41566579
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||| |||||||  ||||||| |||||||||||||         ||||||||| ||||| ||  || |||||||| |||||||  ||||||    
T  41566435 attgcagaagactagaaaagtgaagcaacgtctattttgaaaggatttgaaggcattggatgtttattctttgaagagcgttgatatagtacaattgtac 41566534  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  41566535 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 41566579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 21910643 - 21910548
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21910643 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 21910548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 23391535 - 23391737
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcct--aaaattgcagaagactggaaaag 99  Q
    |||||||||||||||| ||||||  ||||  |||| |||||||  |||| ||||| | ||||| ||| ||||||   ||||||||||||||||   ||||    
T  23391535 tcaccagaagctgcagatcatcaaaagatc-aacctaaagcttcaaaagctgttt-caaggattcaagctcgccagaaaaattgcagaagactttgaaag 23391632  T
Q  100 tatagcaacggctattttgaaag-gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
    | || |||||||||||||||||  ||||||||||||||||  ||||  |||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  23391633 t-taacaacggctattttgaaaaagcattggatgcttattcctcaaggagcgttgacatagttcgtttgtacgaagtgtacaatcactatctgcactact 23391731  T
Q  199 cagttt 204  Q
    | ||||    
T  23391732 ctgttt 23391737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 21072293 - 21072385
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21072293 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctactactcagtttgtgtctctgct 21072385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 7745743 - 7745838
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  7745743 aaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcggtttttgtctctgct 7745838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 33933352 - 33933259
Alignment:
Q  123 gcattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| ||  |||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  33933352 gcattggatgcttgttcctcaaaagagcgttgatatagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 33933259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 42243896 - 42243673
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaa-ttgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||| |||||    |||| |||||||| |||||| |||||||||||||||||||    
T  42243896 atcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaac-ggattcaaactcgtctaaaaattgcagaagactggaaaag 42243798  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    |  ||||||  |||||||||||||         |||| |||| || ||  | |||| |||||||||| | |||||||||||||||||||||||||||| |    
T  42243797 tgaagcaacaactattttgaaaggatttgaagacatttgatgtttgttccttaaaagagcgttgacaaaatacgtttgtacgaagtgtacaaccactacc 42243698  T
Q  190 tccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||| ||||||||||    
T  42243697 tccactactctgttt-tgtctctgct 42243673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 89503 - 89567
Alignment:
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  89503 ttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 89567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 6499299 - 6499231
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6499299 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 6499231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 12352872 - 12352940
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12352872 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 12352940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 19536378 - 19536446
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19536378 agcgttgacatagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtgtctctgct 19536446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 26784434 - 26784346
Alignment:
Q  127 tggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||| ||  || ||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26784434 tggatgcttattctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactacctccactactcagtttgtgtgtctgct 26784346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 9398784 - 9398879
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||| ||||||| | ||  || |||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9398784 aaggcattgaatgcttactttttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactatctccactactcagtttgtgtctctgct 9398879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 6512505 - 6512573
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6512505 agcgttgacaaagtacaattgtacgaagtgtacaaccactatcttcactactcagtttgtgtctctgct 6512573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 17815028 - 17814960
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17815028 agcgttgacaaagtacaattgtacggagtgtacaaccactatctccactactcagtttgtgtctctgct 17814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 33022800 - 33022656
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| ||| |||||||||         ||||||||| || || |||||| |||||||||| |||||  ||||||    
T  33022800 attgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtac 33022701  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| ||||||||||  |||| ||||||||||    
T  33022700 gaagtgtacaaccactacctccactactatgtttttgtctctgct 33022656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 21199053 - 21199148
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||  || ||   |||||||||||| |||||  ||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  21199053 aaggcattggatgctcgttctttggaaagcgttgacaaagtacaattgtacgaagtgtacaatcactacctccactactcagtttgtgtctctgct 21199148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 23881154 - 23881059
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  | ||  || |||||||||| ||| |  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23881154 aaggcattggatgcttgctttttgaagagcgttgacaaagtgcaattgtacgaagtgtacaaccactatctccactacttagtttgtgtctctgct 23881059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 31118088 - 31117869
Alignment:
Q  6 cagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtatag 104  Q
    |||||||||||||||||||||||||| |||  |||||||  |||| |  |||   ||||  ||||||| ||||  |||||||||||||||||||||  ||    
T  31118088 cagaagctgcagttcatcaggagatgcaacataaagcttcaaaaggttgtttaacggatttaaactcgtctaagcattgcagaagactggaaaagtgaag 31117989  T
Q  105 caacggctattttgaaag---------gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccact 195  Q
    ||||| ||| ||||||||         ||||||||||||| || |||||| || ||||||| |||||   ||||||||||||||| ||||||  ||||||    
T  31117988 caacgactaatttgaaagaatttgaaggcattggatgcttgttcttcaaagagtgttgacaaagtacaaatgtacgaagtgtacatccactacttccact 31117889  T
Q  196 actcagtttgtgtctctgct 215  Q
    |||| |||| ||||||||||    
T  31117888 actctgtttttgtctctgct 31117869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 32160853 - 32160763
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    ||||||||||||||||||  |||||| |||||||||| || |||| |||||||||||||| ||||||| ||||||||||| |||| |||||    
T  32160853 aaggcattggatgcttatccttcaaagagcgttgacaaagaacgtatgtacgaagtgtacgaccactacctccactactctgtttatgtct 32160763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 642757 - 642849
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||   |||||||||||||    
T  642757 aaggcattggatgcttgttttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc---ttgtgtctctgct 642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 13545562 - 13545657
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |||||| |||||||||| |||||   |||||||||||||||||||| | |||||||||||  ||| ||||||||||    
T  13545562 aaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacaaccaccacctccactactctatttttgtctctgct 13545657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 20550981 - 20550887
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || || ||| |||||||||| | |||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  20550981 aaggcattggatgcttgttctttaaagagcgttgacaaa-tacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 20550887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 21099799 - 21099849
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21099799 ttgtacgaagtgtacaaccactacctccactactcagtttgtgtctctgct 21099849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 11208039 - 11208125
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    |||||||||||| |   |||||| |||||||||| ||||| | ||||||||||||| |||||||| ||||||||||| |||| |||||    
T  11208039 gcattggatgctcagccttcaaagagcgttgacaaagtac-tatgtacgaagtgtataaccactacctccactactctgtttttgtct 11208125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5430099 - 5429985
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaa-aattgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||| |||  || ||||  |||| |||||| | |||| ||| ||||  |||  |||||||||||||| |||||    
T  5430099 atcaccagaagctgcagttcatcaggagatgcaacttaaggcttcaaaagctgttttatgggattcaacctcgtttaaggattgcagaagactgaaaaag 5430000  T
Q  100 tatagcaacggctat 114  Q
    |  |||||| |||||    
T  5429999 tgaagcaacagctat 5429985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 25096921 - 25096969
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 214  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  25096921 ttgtacgaagtgtacaaccactacctccactactctgttt-tgtctctgc 25096969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 25154891 - 25154939
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 214  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  25154891 ttgtacgaagtgtacaaccactacctccactactctgttt-tgtctctgc 25154939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30115798 - 30115841
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctt 44  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  30115798 atcaccagaagctgcagttcatcaggagatgcaacttaaagctt 30115841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 6407927 - 6407714
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| |||||   ||||| |||||||| |||| |||||||||||||||||||||    
T  6407927 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaa-aggattcaaactcgtctaagattgcagaagactggaaaagt 6407829  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    ||  |||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  6407828 attacaacggctattttggaaggcattggatgctaattcttcaaagagcgttgacatagtacgtttctacgaagtgtacaaccactatctccactactct 6407729  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  6407728 gtttttgtctctgct 6407714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 14989400 - 14989614
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||||| |||||||||||||| |||  |||||||  ||||  ||||   ||||| |||||||| || || ||||| ||||| ||||||||    
T  14989400 atcaccagaagctgcaattcatcaggagatgcaacttaaagcttcaaaagccgtttaa-aggattcaaactcgtctgaagattgctgaagattggaaaag 14989498  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||| ||||||||| |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14989499 tataacaacggctaatttggaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaattgtacaaccactatctccactactc 14989598  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  14989599 tgtttttgtctctgct 14989614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 43639985 - 43639782
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaa-ttgcagaagactggaaaag 99  Q
    ||||||||||| |||||||||||| |||||| |||  |||||||  |||| ||||| | ||||| ||||||||||||||| ||||| |||||||||||||    
T  43639985 atcaccagaagatgcagttcatcatgagatgcaacttaaagcttcaaaagttgttt-caaggattcaaactcgcctaaaaattgcaaaagactggaaaag 43639887  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||  ||||| |||||||||||||||||| ||||||||| |||||| |||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  43639886 tatgacaacgactattttgaaaggcattgaatgcttatttttcaaagagcgttgacatgttacgtttgcacgaagtgtacaaccactatctccactactc 43639787  T
Q  200 agttt 204  Q
     ||||    
T  43639786 tgttt 43639782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 13430576 - 13430791
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaa-gatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaa 98  Q
    ||||||||||||| ||||||||||||||||| |||  |||| ||| ||| | ||||| | ||||  | |||||||||| ||||||||||||| | |||||    
T  13430576 atcaccagaagctacagttcatcaggagatggaacttaaagttttcaaaagctgttt-caaggactctaactcgcctagaaattgcagaagattagaaaa 13430674  T
Q  99 gtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
    ||||  ||||||||||||||||| |||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  13430675 gtatgacaacggctattttgaaacgcattggatgcttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactacttccactact 13430774  T
Q  199 cagtttgtgtctctgct 215  Q
    | |||| |||| |||||    
T  13430775 ctgtttttgtccctgct 13430791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 60 - 215
Target Start/End: Original strand, 18151653 - 18151809
Alignment:
Q  60 aggatacaaactcgcctaaa-attgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacata 158  Q
    ||||| |||||||| || || |||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||| |||||| ||| ||||||||    
T  18151653 aggattcaaactcgtctgaagattgcagaagactggaaaagtataacaacgactaatttggaaggcattggatgcttattcttcaaagagcattgacata 18151752  T
Q  159 gtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  18151753 gtacgtttgtacgaattgtacaaccactatctccactactctgtttttgtctctgct 18151809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 40845329 - 40845550
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagt 100  Q
    ||||||||||||  |||||||||||||||| | |  |||||||  |||| |||||   ||||| |||||||| ||||| |||||||||||||||||||||    
T  40845329 tcaccagaagctatagttcatcaggagatgcagcttaaagcttcaaaagttgttta--aggattcaaactcgtctaaagattgcagaagactggaaaagt 40845426  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    ||||||||| |||||||| ||||         ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  40845427 atagcaacgactattttggaaggattggaaggcattggatgcttattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctc 40845526  T
Q  192 cactactcagtttgtgtctctgct 215  Q
    |||||||| |||| ||||||||||    
T  40845527 cactactctgtttttgtctctgct 40845550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 21301224 - 21301026
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||| ||  ||| ||||| ||  |||| ||||| | | ||  | |||||||||||| ||||||||||| ||||||||    
T  21301224 atcaccagaagctgcagttcatcaggaaattgaactcaaagtttcaaaagctgttt-caatgactctaactcgcctaaagattgcagaagattggaaaag 21301126  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| |||||||||||||||||| |||||||||||||| |  ||||| |||||||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  21301125 tatggcaacggctattttgaaatgcattggatgcttactcctcaaagagcgttgacatagtacgtttgtacaaagtgtacaaccactacttccactactc 21301026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 21288539 - 21288408
Alignment:
Q  68 aactcgcctaaa-attgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgttt 166  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| |  ||||| |||||||||||||| |||||    
T  21288539 aactcgcctaaagattgcagaagactggaaaagtatggcaacggctattttgaaatgtattggatgcttactcctcaaagagcgttgacatagttcgttt 21288440  T
Q  167 gtacgaagtgtacaaccactatctccactact 198  Q
    |||||||||||||||||||||  |||||||||    
T  21288439 gtacgaagtgtacaaccactacttccactact 21288408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 33560173 - 33560359
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| |||||| ||| |||   ||  |||| ||||| | ||||  | |||||||||| ||||| ||||||||||||| ||    
T  33560173 atcaccagaagctgcagttcatcaagagatggaactcaagttttcaaaagttgttt-caaggactctaactcgcctagaaattacagaagactggaagag 33560271  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccacta 187  Q
    | | |||||||||| ||||||| |||||||||||| ||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  33560272 tgtggcaacggctagtttgaaatgcattggatgctaattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccacta 33560359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 15336028 - 15336251
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||| |||||  | | || |||||||| ||||| ||||||||||||||  ||||    
T  15336028 atcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaat-caaactcgtctaaagattgcagaagactgagaaag 15336126  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||| |||||||||||||         |||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  15336127 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 15336226  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||| ||||    
T  15336227 ccactactctgtttttgtctttgct 15336251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 15425093 - 15425316
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||| |||||  | | || |||||||| ||||| ||||||||||||||  ||||    
T  15425093 atcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaat-caaactcgtctaaagattgcagaagactgagaaag 15425191  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||| |||||||||||||         |||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  15425192 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 15425291  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||| ||||    
T  15425292 ccactactctgtttttgtctttgct 15425316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 15516397 - 15516620
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||| |||||  | | || |||||||| ||||| ||||||||||||||  ||||    
T  15516397 atcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaat-caaactcgtctaaagattgcagaagactgagaaag 15516495  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||| |||||||||||||         |||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  15516496 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 15516595  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||| ||||    
T  15516596 ccactactctgtttttgtctttgct 15516620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 22673910 - 22673766
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||| |||||||||||||||  |||||||| ||||         ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  22673910 attgcagaagactagaaaagtatagcaacatctattttggaaggattagaagacattggatgcttattcttcaaagagcgttgacatagtacgtttgtac 22673811  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||    
T  22673810 gaagtgtacaaccactatctccactactttgtttttgtctctgct 22673766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 36105406 - 36105183
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||  |||||||||||||||| |||  |||||||  |||| |||||    |||| |||||||| ||||| ||||||||||| ||||||||    
T  36105406 atcaccagaagctatagttcatcaggagatgcaacttaaagcttcaaaagctgtttaac-ggattcaaactcgtctaaagattgcagaagattggaaaag 36105308  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||| |||||||||||||| ||||         ||||||||| ||||| |||||| |||||||| ||||||||||||||| |||||||||||||||| ||    
T  36105307 tataacaacggctattttggaaggatttgaaggcattggatgtttattcttcaaagagcgttgatatagtacgtttgtacaaagtgtacaaccactacct 36105208  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||| ||| |||| ||||||||||    
T  36105207 ccactgctctgtttttgtctctgct 36105183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 24551485 - 24551265
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| | |||| |||  || ||||  |||| |||||  | |||| ||| |||| ||||| ||||||||||||||||||||    
T  24551485 atcaccagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagttgtttaat-ggattcaacctcgtctaaagattgcagaagactggaaaag 24551387  T
Q  100 tatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||| |||||||||||         |||||||||||||| || |||||| |||||| |||||||||||||||||||||||||||||||||| ||    
T  24551386 tgaagcaacgactattttgaaaagatttgaaggcattggatgcttgttcttcaaagagcgttaacatagtacgtttgtacgaagtgtacaaccactacct 24551287  T
Q  191 ccactactcagtttgtgtctct 212  Q
    ||||||||  |||| |||||||    
T  24551286 ccactactttgtttttgtctct 24551265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 16189116 - 16188972
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| |||||||||||         ||||||||||||||||| ||| || |||||||||| |||||  ||||||    
T  16189116 attgcagaagactggaagagtgaagcaacgactattttgaaatgatttgaaggcattggatgcttattcttctaagagcgttgacaaagtacaattgtac 16189017  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  16189016 gaagtgtacaaccactatctccactactcagtatgtgtctctgct 16188972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 45538379 - 45538602
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| | |||| |||  || ||||  |||| |||||  | |||| ||| |||| ||||| ||||||||||||||||||||    
T  45538379 atcaccagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagttgtttaat-ggattcaacctcgtctaaagattgcagaagactggaaaag 45538477  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||  |||||||||||||         |||||||||||| || |||||| |||||||||| |  ||||||||||||||||||||||||||| ||    
T  45538478 tgaagcaacaactattttgaaaggatttgaagacattggatgcttgttcttcaaagagcgttgacaaatcacgtttgtacgaagtgtacaaccactacct 45538577  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||||||||    
T  45538578 ccactactctgtttttgtctctgct 45538602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 9320781 - 9320557
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||||  |||| |||  || ||||  |||| |||||  | |||| ||| |||| ||||| ||||||||||||||||||||    
T  9320781 atcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaattggattcaacctcgtctaaagattgcagaagactggaaaag 9320682  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    |  ||||||   ||||||||||||         ||||||||||||||| ||||||| |||||||||| ||||  |||||||||||||||||||||||| |    
T  9320681 tgaagcaacaattattttgaaaggatttgaacgcattggatgcttattcttcaaaagagcgttgacaaagtatatttgtacgaagtgtacaaccactacc 9320582  T
Q  190 tccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||| ||||||||||    
T  9320581 tccactactctgttt-tgtctctgct 9320557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 80 - 212
Target Start/End: Complemental strand, 22663248 - 22663107
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||||| |||||||||  |||||||| || |         ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  22663248 attgcagaagactggaaaaatatagcaacaactattttggaaagattagaagacattggatgcttattcttcaaagagcgttgacatagtacgtttgtac 22663149  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||||||| ||||||||||||||  ||| |||||||    
T  22663148 gaagtgtacaaccaatatctccactactctatttttgtctct 22663107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 16207438 - 16207294
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||| ||||||  |||||||||||||         |||||||||||| || |||||| |||||||||| |||||  ||||||    
T  16207438 attgcagaagactggaagagtaaagcaactactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtac 16207339  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  16207338 gaagtgtacaaccactatctccactactctgtttttgtctctgct 16207294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 23185166 - 23185389
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  || | ||||   | ||||  || |||| ||||  ||||||||||||||||||||    
T  23185166 atcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaaggttgttcaat-ggatttaatctcgtctaagcattgcagaagactggaaaag 23185264  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||| ||| |||||||||         ||||||||||||||| |||||| |||||||||| |||||  ||||||||||||||||||||||| ||    
T  23185265 tgaagcaacgactagtttgaaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacct 23185364  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||| ||| |||| ||||||||||    
T  23185365 ccactgctctgtttttgtctctgct 23185389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 24646420 - 24646326
Alignment:
Q  121 aggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||| ||  || || ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24646420 aggcattggatgcttattctttgaagagtgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 24646326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 602791 - 602883
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  602791 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 602883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 12757831 - 12757923
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||||||||| || ||  || |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12757831 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 12757923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 17797633 - 17797410
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||| ||||||||||||| |||  ||||| |  |||| ||||   | |||| ||| |||| ||||  ||| ||||||||||||||||    
T  17797633 atcaccagaagctgcagctcatcaggagatgcaacttaaagcctcaaaagttgttcaat-ggattcaatctcgtctaaccattacagaagactggaaaag 17797535  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |   |||||||||| |||||||||         |||||||||||| || |||||| |||||||||| |||||  ||||||||||||||||||||||| ||    
T  17797534 tgatgcaacggctagtttgaaaggaattgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacct 17797435  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||||||||    
T  17797434 ccactactctgtttttgtctctgct 17797410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 18679895 - 18679803
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18679895 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctactactcagtttgtgtctctgct 18679803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 18719081 - 18718989
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18719081 gcattggatgcttgttctttgaagagcgttgtcatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 18718989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 39693615 - 39693523
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39693615 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 39693523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 17441827 - 17441967
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg--------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacg 171  Q
    ||||||||||||||||| | || ||||||| |||||||||||||        ||||||||||||||| ||  || |||||||||| |||||  ||||||     
T  17441827 attgcagaagactggaagactaaagcaacgactattttgaaaggatttgaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtact 17441926  T
Q  172 aagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  17441927 aagtgtacaaccactatctccactactcattttgtgtctct 17441967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 19156279 - 19156184
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19156279 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactatctccactactcagtttgtgtctctgct 19156184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 1745362 - 1745158
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| |||||| ||| |||   ||  |||| ||||| | ||||  |  ||||||||| ||||| ||||||||| ||| ||    
T  1745362 atcaccagaagctgcagttcatcaagagatggaactcaagttttcaaaagttgttt-caaggactcttactcgcctagaaattacagaagactagaagag 1745264  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacg-aagtgtacaaccactatctccactact 198  Q
    | | |||||||||| ||||||| |||||||||||| ||  ||||||  ||||||||||||||||| |||||| ||||||||||| ||||  |||||||||    
T  1745263 tgtggcaacggctagtttgaaatgcattggatgctaatacttcaaagtgcgttgacatagtacgtctgtacgaaagtgtacaacaactacttccactact 1745164  T
Q  199 cagttt 204  Q
    | ||||    
T  1745163 ctgttt 1745158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 16681371 - 16681466
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| ||||||| || ||  || ||||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  16681371 aaggcattagatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctagtactcagtttgtgtctctgct 16681466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 20382489 - 20382556
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 214  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20382489 agcgttgacatagtacaattgtacgaagtgtacaaccactatctccactaatcagtttgtgtctctgc 20382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 21932967 - 21932871
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||| || |||||| |||||||||| ||||   ||||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  21932967 aaaggcattgtatgcttgtttttcaaagagcgttgacaaagtaaaattgtacgaagtgtacaaccactacctccactactcagtgtttgtctctgct 21932871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 18321229 - 18321319
Alignment:
Q  122 ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||||||| || ||  ||  ||||||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  18321229 ggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccattatctccactactcagtttgtgtctct 18321319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 1237845 - 1237625
Alignment:
Q  4 accagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtat 102  Q
    ||||||||||||| ||||||| | |||| |||  || ||||  |||| |||||  | |||| ||| |||| ||||| |||||||||||| ||||||||      
T  1237845 accagaagctgcaattcatcatgggatgcaacttaaggcttcaaaagctgtttaat-ggattcaacctcgtctaaagattgcagaagaccggaaaagtga 1237747  T
Q  103 agcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcca 193  Q
    ||||||| |||||||||||||         ||||||||  || || |||||| |||||||||| ||||| ||||| |||||||||||||||||| |||||    
T  1237746 agcaacgactattttgaaaggatttgaaggcattggatatttgttcttcaaagagcgttgacaaagtacttttgtgcgaagtgtacaaccactacctcca 1237647  T
Q  194 ctactcagtttgtgtctctgct 215  Q
    |||||| |||  ||||||||||    
T  1237646 ctactctgttgttgtctctgct 1237625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 17525800 - 17525889
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||| || ||  || |||||||||| |||||  |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  17525800 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatcttcactactcagtttgtgtctct 17525889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 25164123 - 25164058
Alignment:
Q  150 gttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25164123 gttgtcatagtacaattgtacgaagtgtacaaccactatctccactactcaatttgtgtctctgct 25164058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 29693367 - 29693303
Alignment:
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29693367 ttgacaaagtacaattgtacgaagtgtacaaccattatctccactactcagtttgtgtctctgct 29693303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 17267526 - 17267463
Alignment:
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 214  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  17267526 ttgacatagtacaattgtacgaattgtacaaccactatctccactactcagtttttgtctctgc 17267463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 17914542 - 17914447
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| ||||||| || ||  || |||||||||| |||||  |||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  17914542 aaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactatctccactactcaatttgtttctctgct 17914447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 43644979 - 43644884
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||| | | |||||  ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  43644979 aaggcattggatgcttgttctttgaagagcgttaataaagtacaattgtacgaagtgtacaaccactacctccactactcggtttgtgtctctgct 43644884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 23263680 - 23263757
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactac 197  Q
    ||||||||||||| || || |||||| |||||||||| |||||  ||||||||||||||||||||||| |||||||||    
T  23263680 aaggcattggatgtttgttcttcaaagagcgttgacaaagtacagttgtacgaagtgtacaaccactacctccactac 23263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 24833127 - 24833204
Alignment:
Q  123 gcattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||||||||||||| ||  |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  24833127 gcattggatgcttgttcctcaaaagagcgttgacatggtacgtttgtacgaagtgtacaaccactacctccattactc 24833204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 17701828 - 17701733
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||| |||  |  || ||||||| || ||||   ||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  17701828 aaggcattggatgctaattcctttaagagcgttggcaaagtataattgtacgaagtttacaaccactacctccactactcagtttgtgtctctgct 17701733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 214
Target Start/End: Original strand, 30421447 - 30421591
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaa---------aggcattggatgcttattatt--caaaaagcgttgacatagtacgtttgt 168  Q
    |||||||||||||||||||||  ||||||| ||| ||||||         ||||||||||||||| || ||  |||| |||||||||| ||||| || ||    
T  30421447 attgcagaagactggaaaagtgaagcaacgactagtttgaatggatttgaaggcattggatgcttgttcttttcaaagagcgttgacaaagtacatt-gt 30421545  T
Q  169 acgaagtgtacaaccactatctccactactcagtttgtgtctctgc 214  Q
    ||||||| ||||||||||| ||||||||||| |||| |||||||||    
T  30421546 acgaagtttacaaccactacctccactactctgtttttgtctctgc 30421591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 45567969 - 45568059
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    ||||||||||||| ||||  |||||| |||||||||| ||||| | |||||||||||||| ||||||| || |||||||| |||| |||||    
T  45567969 aaggcattggatgattatccttcaaagagcgttgacaaagtacttctgtacgaagtgtacgaccactaccttcactactctgtttatgtct 45568059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 19943319 - 19943234
Alignment:
Q  120 aaggcattggatgcttatta-ttcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||||||||||| ||  || |||||||||||||| ||||   ||||||||||||||||||||||| ||||||||||| ||||    
T  19943319 aaggcattggatgcttgttcctttaaaaagcgttgacaaagtaaaattgtacgaagtgtacaaccactacctccactactctgttt 19943234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 18685465 - 18685549
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||| |||||||||| ||  || |||||||| | | |||  ||||||||||||||||||||||||||||||||||| ||||    
T  18685465 aaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactctgttt 18685549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 18722714 - 18722798
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||| |||||||||| ||  || |||||||| | | |||  ||||||||||||||||||||||||||||||||||| ||||    
T  18722714 aaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactctgttt 18722798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 18731059 - 18731143
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||| |||||||||| ||  || |||||||| | | |||  ||||||||||||||||||||||||||||||||||| ||||    
T  18731059 aaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactctgttt 18731143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 19707560 - 19707497
Alignment:
Q  149 cgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||| |||||  |||||||||||||||||||||||  ||| |||||||||||||||||||    
T  19707560 cgttgacaaagtacaattgtacgaagtgtacaaccactacatcctctactcagtttgtgtctct 19707497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 33082940 - 33082873
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccacta 187  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||    
T  33082940 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 33082873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 18121176 - 18121269
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| || |||||| ||| || ||| |||||  |||||||||||||   ||||||| ||| ||||||| |||| ||||||||||    
T  18121176 aaaggcattggatgcttgttcttcaaagagcattaacaaagtacaattgtacgaagtgt---accactacctcaactactctgtttctgtctctgct 18121269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 45292876 - 45292842
Alignment:
Q  153 gacatagtacgtttgtacgaagtgtacaaccacta 187  Q
    |||||||||||||||||||||||||||||||||||    
T  45292876 gacatagtacgtttgtacgaagtgtacaaccacta 45292842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 2810882 - 2810811
Alignment:
Q  142 caaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||| |||||||||||||||| |||||||||| |||||||||||  |||||||||||| |||| | ||||||||    
T  2810882 caaagagcgttgacatagtac-tttgtacgaactgtacaaccac-ctctccactactctgtttttatctctgct 2810811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 7018416 - 7018454
Alignment:
Q  172 aagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  7018416 aagtgtacaaccactacctccactactctgtttgtgtct 7018454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 20259652 - 20259690
Alignment:
Q  172 aagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  20259652 aagtgtacaaccactacctccactactctgtttgtgtct 20259690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 21046282 - 21046320
Alignment:
Q  172 aagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  21046282 aagtgtacaaccactacctccactactctgtttgtgtct 21046320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 210
Target Start/End: Complemental strand, 14425651 - 14425444
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagta 101  Q
    ||||||||||||  |||||||||||||||| |||  |||||||  |||| ||||| | ||||| ||||||||||||| |||||||||||||||| |||||    
T  14425651 tcaccagaagctanagttcatcaggagatgcaacttaaagcttcaaaagttgttt-caaggattcaaactcgcctaacattgcagaagactgganaagta 14425553  T
Q  102 tagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcag 201  Q
    | |||||||||||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  14425552 tggcaacggctattttgaaatgcattggatgcttattcttcaaagagcgttgacatattacgtttgtacgaagtgtacaaccactatctccactactctg 14425453  T
Q  202 tttgtgtct 210  Q
    ||| |||||    
T  14425452 tttttgtct 14425444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 48062772 - 48062986
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| |||||| |||  |||||||  |||| ||||| | || || |||||||||||| ||||||  ||||||||||||||    
T  48062772 atcaccagaagctgcagttcatcaagagatgcaacttaaagcttcaaaagttgttt-caagaattcaaactcgcctagaaattgtcgaagactggaaaag 48062870  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  48062871 tatggcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagcgtacaaccactatctccattactc 48062970  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  48062971 tgtttctgtctctgct 48062986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 55 - 212
Target Start/End: Complemental strand, 1293182 - 1293025
Alignment:
Q  55 tttctaggatacaaactcgcctaaaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttga 154  Q
    |||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||| ||||||||    
T  1293182 tttcaaggattcaaactcgactaaaattgcaaaagactggaaaagtatagcaacaactattttgaaaggcattggatgcttattcttcaaagagcgttga 1293083  T
Q  155 catagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  1293082 catagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctct 1293025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27871925 - 27871710
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||| ||| |||  |||||||  |||| ||||| | ||||| |||| || |||| |||||||||||| |||||| ||    
T  27871925 atcaccagaagctgcagttcatcaggaaatgcaacttaaagcttcaaaagttgttt-caaggattcaaattcacctagaaattgcagaagtctggaatag 27871827  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaa-aagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
    ||| |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27871826 tatggcaacggctattttgaaatgcattggatgcttattcttcaaagaagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactact 27871727  T
Q  199 cagtttgtgtctctgct 215  Q
    | |||| ||||||||||    
T  27871726 ctgtttttgtctctgct 27871710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 32264669 - 32264884
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||||||||||  ||  |||||||  |||| | ||| | ||||| |||||||||||| ||||||||||||||||||||||    
T  32264669 atcaccagaagctgcagttcatcaggagatgcgacttaaagcttcaaaagttattt-caaggattcaaactcgcctagaaattgcagaagactggaaaag 32264767  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaa-aagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
    ||| |||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||||  |||||||||||| || ||||||| ||    
T  32264768 tatggcaacggctattttgaaatgcattggatgtttattcttcaaagaagcgttgacatagtacgtttgtacagagtgtacaaccagtacctccactgct 32264867  T
Q  199 cagtttgtgtctctgct 215  Q
    | |||| ||||||||||    
T  32264868 ctgtttttgtctctgct 32264884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19339202 - 19339400
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||  |||  |||| ||  |||  ||||| | ||||  | |||||||||||| ||||||||||||||||||||    
T  19339202 atcaccagaagctgcagttcatcaggagattgaacttaaagtttcaaaacctgttt-caaggactctaactcgcctaaagattgcagaagactggaaaag 19339300  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    | | |||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19339301 tgtggcaacgactattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactc 19339400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 68 - 215
Target Start/End: Original strand, 24794732 - 24794881
Alignment:
Q  68 aactcgccta-aaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaa-aagcgttgacatagtacgtt 165  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||    
T  24794732 aactcgcctagaaattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgcttattcctcaaagaagcgttgacatagtacgtt 24794831  T
Q  166 tgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||  |||||||||| |||| ||||||||||    
T  24794832 tgtacgaagtgtacaaccactacttccactactctgtttttgtctctgct 24794881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 8183144 - 8182922
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||  |||| ||| |   ||  | |||||||| |||| |||||||||||||||||||||    
T  8183144 atcaccagaagctgcagttcatcaggagatgcaactcaaagcttaaaaagttgtataaaagttt-caaactcgtctaagattgcagaagactggaaaagt 8183046  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    ||||||||  |||||||||||||         || | |||||||||| |||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  8183045 atagcaacaactattttgaaaggattgaaagacacttgatgcttattcttcaaagagcgttgacataatacgtctgtacgaagtgtacaaccactatctc 8182946  T
Q  192 cactactcagtttgtgtctctgct 215  Q
    |||||||| |||| ||||||||||    
T  8182945 cactactctgtttttgtctctgct 8182922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 21381380 - 21381579
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||  |||  | || ||  |||| ||||| | ||||  | |||||||||||| ||||||||||||||||||||    
T  21381380 atcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagttgttt-caaggactctaactcgcctaaagattgcagaagactggaaaag 21381478  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacg-aagtgtacaaccactatctccactact 198  Q
    | | |||||||||||||||||| ||||||||||| |||| |||||| |||||||||||||||||| |||||| || |||||||||||||  |||||||||    
T  21381479 tgtggcaacggctattttgaaatgcattggatgcctattcttcaaagagcgttgacatagtacgtctgtacgaaaatgtacaaccactacttccactact 21381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 2265462 - 2265674
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| || |||||||||||||||| |||  |||||||| |||| |||||   || || |||||||| ||||| |||||||||||||| |||||    
T  2265462 atcaccagaagttgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaacag-attcaaactcgtctaaagattgcagaagactgaaaaag 2265560  T
Q  100 tatagcaacggctattttgaaaggcattgga---------tgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    ||||||||||||||||||| ||||  ||| |         |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  2265561 tatagcaacggctattttggaaggatttgaaggtatttaatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacct 2265660  T
Q  191 ccactactcagttt 204  Q
    ||||| ||| ||||    
T  2265661 ccactgctctgttt 2265674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4821688 - 4821466
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||| ||||||  |||  |||||||  |||| |||||   |  || |||||||| ||||| ||| ||||||||| ||||||    
T  4821688 atcaccagaagctgcagttcatccggagatacaacttaaagcttcaaaagctgtttaacaa-attcaaactcgtctaaagattacagaagactagaaaag 4821590  T
Q  100 tatagcaacggctattttgaaag--------gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    |  ||||||||||||||||||||        ||||||||||||| || |||||| |||||||| | |||||||||||||||||||||||||||||| |||    
T  4821589 tggagcaacggctattttgaaagatttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagtacgtttgtacgaagtgtacaaccactacctc 4821490  T
Q  192 cactactcagtttgtgtctctgct 215  Q
    |||||||| |||| ||||||||||    
T  4821489 cactactctgtttttgtctctgct 4821466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 4411914 - 4412125
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||| ||||||  |||  |||| ||  |||| ||||| | ||||  | |||||||||| |||||||||||||||||| |||    
T  4411914 atcaccagaagctgcagttcatctggagattgaacttaaagtttcaaaagctgttt-caaggactctaactcgcctagaaattgcagaagactggagaag 4412012  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||  |||||||||  |||||| |||||||||||||| |  ||||| ||||||||||| || ||| |||||||| |||||||||||||  ||||||||||    
T  4412013 tatgacaacggctaacttgaaaagcattggatgcttaattctcaaagagcgttgacattgtgcgtctgtacgaactgtacaaccactacttccactactc 4412112  T
Q  200 agtttgtgtctct 212  Q
     |||| |||||||    
T  4412113 tgtttttgtctct 4412125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 14426757 - 14426542
Alignment:
Q  6 cagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtatag 104  Q
    |||||| ||||||||||||||||||| |||  |||||||   ||| |||||  | |||| |||||||  ||||| |||||||||||||||||||||  ||    
T  14426757 cagaaggtgcagttcatcaggagatgcaacttaaagcttcagaagctgtttaat-ggattcaaactcatctaaagattgcagaagactggaaaagtgaag 14426659  T
Q  105 caacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccact 195  Q
    ||||| |||||||||||||         |||||||||||| || |||||| |||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  14426658 caacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctccact 14426559  T
Q  196 actcagtttgtgtctct 212  Q
    |||| |||| |||||||    
T  14426558 actctgtttttgtctct 14426542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 48805831 - 48806045
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| |||||| ||| |||   ||  |||| ||||| | ||||  | |||||||||| ||||| || |||||||||  |     
T  48805831 atcaccagaagctgcagttcatcaagagatggaactcaagttttcaaaagctgttt-caaggactctaactcgcctagaaattacataagactggaggaa 48805929  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| |||||||||| ||||||| ||||||||||||  || |||||| ||||||||||||||||||| |||| ||||||||||||||||  ||||||||||    
T  48805930 tatggcaacggctagtttgaaatgcattggatgctatttcttcaaagagcgttgacatagtacgttcgtacaaagtgtacaaccactacttccactactc 48806029  T
Q  200 agtttgtgtctctgct 215  Q
     | || ||||||||||    
T  48806030 tgattttgtctctgct 48806045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 29935432 - 29935524
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || || ||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29935432 gcattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtgtctctgct 29935524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 2913679 - 2913774
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2913679 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 2913774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 16111955 - 16112050
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |||||| |||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  16111955 aaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 16112050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 16309978 - 16310073
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || ||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16309978 aaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctacactactcagtttgtgtctctgct 16310073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 21283395 - 21283536
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||| ||||||| | |||||||||||         |||||||||||| ||||||||| |||||||||| |||||  ||||||    
T  21283395 attgcagaagactggaagagtaaagcaacgtccattttgaaaggatttgaaggcattggatgcttgttattcaaagagcgttgacaaagtacaattgtac 21283494  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  21283495 gaagtgtacaaccactacctccactactctgtttttgtctct 21283536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 13648865 - 13648721
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||| || |||  |||||||||||||||||||||         ||||||||||||  | ||  || ||||||||||||||||  ||||||    
T  13648865 attgcagaagactgaaagagtgaagcaacggctattttgaaaggatttaaagacattggatgcttgatctttgaagagcgttgacatagtacaattgtac 13648766  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  13648765 gaagtgtacaaccactatctccactactcaatttgtgtctctgct 13648721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 19711084 - 19711176
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||||||||  |||||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  19711084 aaggcattggatgcttatccttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactatttccactactctgtttttgtctct 19711176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 13880191 - 13880096
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| |||||||||| ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13880191 aaggcattagatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcactttgtgtctctgct 13880096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 80 - 214
Target Start/End: Complemental strand, 15088656 - 15088513
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||| || |||  ||||||| |||||||||||||         |||||||||||| || ||  || |||||||||| |||||  ||||||    
T  15088656 attgcagaagactgaaagagtgaagcaacgactattttgaaaggatttgaagacattggatgcttgttcttttaagagcgttgacaaagtacaattgtac 15088557  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15088556 gaagtgtacaaccactatctccactactcagtttgtgtctctgc 15088513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 16316632 - 16316723
Alignment:
Q  124 cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||| || ||  || |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16316632 cattggatgcttgttctttgaagagcgttgaaatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 16316723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 30944394 - 30944489
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||| |||||| |||||||||| | |||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  30944394 aaggcattggatgcttattcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 30944489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 12174283 - 12174479
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||||  |||| |||  || ||||  |||| |||||| | |||| ||| |||| ||||  ||||||||||||||||||||    
T  12174283 atcaccagaagctgcagttcatcagaggatgcaacttaa-gcttcaaaagctgttttatgggattcaacctcgtctaaggattgcagaagactggaaaag 12174381  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccacta 187  Q
    |  ||||||| |||||||||||||         |||||||||||| ||  |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  12174382 tgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 12174479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 23279980 - 23280113
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||| ||||||||||||||||  ||||||||||| |||||||||         |||||||||||| || |||||| |||||||||| |||||  ||||||    
T  23279980 attgtagaagactggaaaagtggagcaacggctagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtac 23280079  T
Q  171 gaagtgtacaaccactatctccactactcagttt 204  Q
    ||||||||||||||||||||||||||||| ||||    
T  23280080 gaagtgtacaaccactatctccactactctgttt 23280113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 35952630 - 35952851
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| |||||||||||||  |||| |||  || ||||  |||| |||||  | |||| ||| |||| ||||  |||| |||||||||||||||    
T  35952630 atcaccagaagttgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgggattcaacctcgtctaaggattgaagaagactggaaaag 35952729  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||| |||||||||||||         ||||||||| || ||  ||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  35952730 tgaagcaacgactattttgaaaggatttgaaggcattggatgtttgttcatcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 35952829  T
Q  191 ccactactcagtttgtgtctct 212  Q
    ||| ||||| |||| |||||||    
T  35952830 ccattactctgtttttgtctct 35952851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 15704445 - 15704620
Alignment:
Q  4 accagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtat 102  Q
    |||||||| || |||||||||| ||||| |||  |||||||  |||| |||||    |||| |||||||| ||||| |||||||||||||||||||||||    
T  15704445 accagaagttgtagttcatcagaagatgaaacttaaagcttcaaaagctgtttaac-ggattcaaactcgtctaaagattgcagaagactggaaaagtat 15704543  T
Q  103 agcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||| |||||||| ||||         ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15704544 agcaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtac 15704620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 331731 - 331637
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||  |||||| ||||||||| |||||   |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  331731 aaggcattggatgcttattgctcaaaa-gcgttgacaaagtacaaatgtacgaagtgtacaaccactacctccactacacagtttgtgtctctgct 331637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 5000922 - 5000985
Alignment:
Q  149 cgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5000922 cgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 5000985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 13137966 - 13138061
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  13137966 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccattactcagtttatgtctctgct 13138061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 21692374 - 21692279
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  ||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  21692374 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactcagtttgtgtctctgct 21692279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 33605772 - 33605677
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |||||| |||||||||| |||||| ||||||||||||||||||||||| || |||||||  |||| ||||||||||    
T  33605772 aaggcattggatgcttgttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactaccttcactactatgtttttgtctctgct 33605677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 123 - 213
Target Start/End: Original strand, 13730749 - 13730839
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctg 213  Q
    ||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13730749 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccattatctccactactcagtttgtgtctctg 13730839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 9069650 - 9069554
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||| || |||||  ||| |||||| |||||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  9069650 aaaggcattgtatgcttgttcttcaaggagcattgacaaagtacaattgtacgaagtgtacaaccactacctccactactcagtttttgtctctgct 9069554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 13018603 - 13018671
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13018603 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctgtgct 13018671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 13260689 - 13260781
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||| |||| |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13260689 gcattggatgcttgttcttggaagagcattgagatagtacaattgtacgaagtgtacaaccactatctccactacccagtttgtgtctctgct 13260781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 28409126 - 28409034
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||| || || |||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  28409126 aaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 28409034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 39284635 - 39284727
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||| || || ||  || |||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39284635 aaggcattggatgtttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcagtttgtgtctct 39284727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 13302897 - 13302802
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| ||||||| || ||  || |||||||||| |||||  |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  13302897 aaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatcaccactactcagtttgtgtctctgct 13302802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 21695488 - 21695393
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  21695488 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccagtacctcaactactcagtttgtgtctctgct 21695393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 30025992 - 30025897
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| ||||||| || ||  || |||||||||| |||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  30025992 aaggcattcgatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccaatatctctactactcagtttgtgtctctgct 30025897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 44467151 - 44467056
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || || ||| || ||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  44467151 aaggcattggatgcttgttctttaaagagtgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 44467056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 48236973 - 48237068
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||  |||||||||| |||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||  |||| ||||||||||    
T  48236973 aaggcatcagatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactttgtttttgtctctgct 48237068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 19237114 - 19237204
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    |||||||||||||||| || |||||| |||||||||| | |||  || |||||||||||||||||||| ||||||||||| ||||||||||    
T  19237114 aaggcattggatgcttgttcttcaaagagcgttgacaaactacaattatacgaagtgtacaaccactacctccactactctgtttgtgtct 19237204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 2500122 - 2500030
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||  ||  || || ||||||| |||||  |||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  2500122 gcattggatgcttatcctttgaagagagttgacaaagtacaattgtacaaagtgtacaaccactttctccactactcagtttgtgtctctgct 2500030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 11792967 - 11792899
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  11792967 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccaccacttagtttgtgtctctgct 11792899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 28622299 - 28622522
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| ||||   | |||| ||| |||| ||||  ||||||||| ||| ||||||    
T  28622299 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgttcaat-ggattcaatctcgtctaagcattgcagaatactagaaaag 28622397  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||||||| |||||||||         ||||||||| || || ||||||  ||||||||| |||||  |||||||| |||||||||||||| ||    
T  28622398 tgaagcaacggctaatttgaaaggatttgaaggcattggatgtttgtttttcaaagggcgttgacaaagtacaattgtacgaggtgtacaaccactacct 28622497  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    | ||| ||| |||| ||||||||||    
T  28622498 ctacttctctgtttttgtctctgct 28622522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 33691782 - 33691878
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| || ||||||| || |||||| |||||||||| |||||  |||||||||||||| |||||||| ||||||||||| |||| ||||||||||    
T  33691782 aaaggcgttagatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccactacctccactactctgtttttgtctctgct 33691878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 10883244 - 10883339
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||| | || ||  || |||||||||| |||||  ||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  10883244 aaggcattggatgcctgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaatcactacctccactactcagtttgcgtctctgct 10883339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 22578092 - 22578187
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||| ||| || || || ||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  22578092 aaggcattgaatgattgttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 22578187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 30945427 - 30945518
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctc 211  Q
    |||||||||||||||| ||  ||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||  |||| ||||||    
T  30945427 aaggcattggatgcttgttcctcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactttgtttttgtctc 30945518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 41842372 - 41842439
Alignment:
Q  148 gcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||||  ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  41842372 gcgttgacagagtacaattgtacgaagtgtacaaccactacctgcactactcagtttgtgtctctgct 41842439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 16542963 - 16543152
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||| ||||||||||||||||||||||| |||  || ||||  |||| |||||  | |||| ||||||||  |||  ||||||||||||||||||||    
T  16542963 atcaccataagctgcagttcatcaggagatgcaacataatgcttcaaaagctgtttaat-ggattcaaactcgtttaatgattgcagaagactggaaaag 16543061  T
Q  100 tatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaa 181  Q
    |  ||||||| |||||||||||         |||||||||||||| || |||||| |||  ||||| ||||||||||||||| ||||||||    
T  16543062 tgaagcaacgactattttgaaatgatttgaaggcattggatgcttgttcttcaaagagctctgacaaagtacgtttgtacgatgtgtacaa 16543152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 16622699 - 16622510
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||| ||||||||||||||||||||||| |||  || ||||  |||| |||||  | |||| ||||||||  |||  ||||||||||||||||||||    
T  16622699 atcaccataagctgcagttcatcaggagatgcaacataatgcttcaaaagctgtttaat-ggattcaaactcgtttaatgattgcagaagactggaaaag 16622601  T
Q  100 tatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaa 181  Q
    |  ||||||| |||||||||||         |||||||||||||| || |||||| |||  ||||| ||||||||||||||| ||||||||    
T  16622600 tgaagcaacgactattttgaaatgatttgaaggcattggatgcttgttcttcaaagagctctgacaaagtacgtttgtacgatgtgtacaa 16622510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 11319489 - 11319400
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||| | || ||  || |||||||||| | |||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11319489 gcattggatgcgtgttttttgaagagcgttgacaaattacaattgcacgaagtgtacaaccactatctccactactcagtttgtgtctct 11319400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 12366846 - 12366914
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  ||||||||||| ||||||||||| |||||||| ||||| ||||||||||||    
T  12366846 agcgttgacatagtacaattgtacgaagtatacaaccactacctccactaatcagtctgtgtctctgct 12366914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 24788228 - 24788136
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||| ||||| || |||||| ||  |||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  24788228 aaggcattgggtgcttgttcttcaaagagaattgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctct 24788136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 9709873 - 9709968
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| ||||||| || |||||| ||||||||||||||||   ||||||||||||| ||||||||  |||||| ||| |||| ||||||||||    
T  9709873 aaggcattagatgcttgttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccactacatccactgctctgtttttgtctctgct 9709968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 15468003 - 15467924
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||||||||||| || |||||| |||||||||| |||||  |||||||| ||||||||||| || |||||||||||    
T  15468003 aaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaggtgtacaaccattacctccactactc 15467924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 13692478 - 13692372
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtac 179  Q
    ||||||||||||||||| |||  ||||||  |||||||||||| ||||||||||||  | || | | || ||||||| |||||  |||||||||||||||    
T  13692478 attgcagaagactggaagagtgaagcaacaactattttgaaagacattggatgcttgatctttatagagtgttgacaaagtacaattgtacgaagtgtac 13692379  T
Q  180 aaccact 186  Q
    |||||||    
T  13692378 aaccact 13692372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 14193201 - 14193108
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctg 213  Q
    ||||||||| |||||| || |||||| |||||| ||| |||||   |||||||||||||||||||||| ||| ||||||| |||| ||||||||    
T  14193201 aaggcattgaatgcttgttcttcaaagagcgttaacaaagtacaagtgtacgaagtgtacaaccactacctctactactctgtttttgtctctg 14193108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9709745 - 9709788
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctt 44  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  9709745 atcaccagaagctgcagttcatcaggagatgcaacataaagctt 9709788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 16556664 - 16556703
Alignment:
Q  84 cagaagactggaaaagtatagcaacggctattttgaaagg 123  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  16556664 cagaagactggaaaagtgaagcaacggctattttgaaagg 16556703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 16608998 - 16608959
Alignment:
Q  84 cagaagactggaaaagtatagcaacggctattttgaaagg 123  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  16608998 cagaagactggaaaagtgaagcaacggctattttgaaagg 16608959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33605901 - 33605858
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctt 44  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  33605901 atcaccagaagctgcagttcatcaggagatgcaacataaagctt 33605858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48236845 - 48236888
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctt 44  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  48236845 atcaccagaagctgcagttcatcaggagatgcaacttaaagctt 48236888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 4494619 - 4494569
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||| ||| |||||||||||  ||| ||||||||||    
T  4494619 ttgtacgaagtgtacaaccgctacctccactactctctttttgtctctgct 4494569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 14745750 - 14745787
Alignment:
Q  172 aagtgtacaaccactatctccactactcagtttgtgtc 209  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  14745750 aagtgtacaaccactatctccactactctgtttttgtc 14745787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 125; Significance: 2e-64; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 25566 - 25777
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||| |||  |||| ||  |||| ||||| | ||||| |||||||||||| |||||||| |||||||||||||    
T  25566 atcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaagttgttt-caaggattcaaactcgcctagaaattgcaaaagactggaaaag 25664  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| ||||| | |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25665 tatggcaacagatattttgaaatgcattggatgcttattcttcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactc 25764  T
Q  200 agtttgtgtctct 212  Q
     |||| |||||||    
T  25765 tgtttttgtctct 25777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 34705 - 34919
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||| |||||||||||||| |||||||||| |||  |||| ||  |||| ||||| | ||||| |||||||||||| ||||||||||||||||||||||    
T  34705 atcactagaagctgcagttcttcaggagatgcaacttaaagtttcaaaagttgttt-caaggattcaaactcgcctagaaattgcagaagactggaaaag 34803  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| ||||||  |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  34804 tatggcaacgaatattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtatgaagtgtacaaccactacctccactactc 34903  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  34904 tgtttttgtctctgct 34919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 36249 - 36281
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactac 197  Q
    |||||||||||||||||||||||||||||||||    
T  36249 ttgtacgaagtgtacaaccactatctccactac 36281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 1e-61; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 19065957 - 19066171
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||| | |  |||||||  |||| ||||| | ||||  | |||||||||| ||||||||||||||||||||||    
T  19065957 atcaccagaagctgcagttcatcaggagatggatcttaaagcttcaaaagctgttt-caaggactctaactcgcctagaaattgcagaagactggaaaag 19066055  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  19066056 tatggcaacggctattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtatgtttgtacgaagtgtacaaccactacttccactactc 19066155  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  19066156 tgtttttgtctctgct 19066171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 12349211 - 12348995
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    |||| |||||||||||||||||||||||||| |||  | |||||  |||| ||||| | ||||| |||||||| |||| |||||||||||||||||||||    
T  12349211 atcatcagaagctgcagttcatcaggagatgcaacttagagcttcaaaagctgttt-caaggattcaaactcgtctaagattgcagaagactggaaaagt 12349113  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    ||||||||| |||||||||||||         ||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  12349112 atagcaacgactattttgaaaggattgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacaaagtgtacaaccactatctc 12349013  T
Q  192 cactactcagtttgtgtc 209  Q
    |||||||| |||| ||||    
T  12349012 cactactctgtttttgtc 12348995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22076337 - 22076560
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| || |||||||||||||||| |||  |||||||| |||| |||||   |||||  ||||||| ||||| ||||||||||||| ||||||    
T  22076337 atcaccagaagatgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaa-aggatttaaactcgtctaaagattgcagaagactcgaaaag 22076435  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||||||||| |||||||| ||||         |||| |||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  22076436 tatagcaacgactattttggaaggattggaaagcatttgatgcttattcttcaaagagcgttgacatagtacatttgtacgaagtgtacaaccactatct 22076535  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| ||||||||||    
T  22076536 ccactactctgtttttgtctctgct 22076560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16336346 - 16336123
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| || || ||||||||||||| |||   ||||||  |||| |||||   ||||| |||||||| ||||| ||||||||||||||||||||    
T  16336346 atcaccagaagttgtagatcatcaggagatgcaacttgaagcttcaaaagttgtttaa-aggattcaaactcgtctaaacattgcagaagactggaaaag 16336248  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||||||||| |||||||| ||||         ||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  16336247 tatagcaacgactattttggaaggattagaaggcattgaatgcttattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactatct 16336148  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
     |||||||| |||| ||||||||||    
T  16336147 acactactctgtttttgtctctgct 16336123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 61 - 211
Target Start/End: Complemental strand, 12423420 - 12423261
Alignment:
Q  61 ggatacaaactcgcctaaaattgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgt 151  Q
    |||| |||||||| |||| | |||||||||||||||||||||||||||| |||||||||||||         ||||| ||||||||| |||||| |||||    
T  12423420 ggattcaaactcgtctaagaatgcagaagactggaaaagtatagcaacgactattttgaaaggattggaaggcattgtatgcttattcttcaaagagcgt 12423321  T
Q  152 tgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctc 211  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  12423320 tgacatagtacctttgtacgaagtgtacaaccactatctccactactctgtttttgtctc 12423261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 19086288 - 19086154
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtac 179  Q
    ||||||||||||||| | |||  ||||||| |||||||||||| |||||||||||| || ||  || ||||||||||||||||  |||||||||||||||    
T  19086288 attgcagaagactgggagagtgaagcaacgactattttgaaag-cattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtac 19086190  T
Q  180 aaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||||||||||||||||    
T  19086189 aaccactatctccactactcagtttgtgtctctgct 19086154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 33351859 - 33352079
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    |||||||||| ||||| |||||| ||||||| |||  ||||| |  |||| ||||| | ||||| || ||||| |||| | |||||||||||||||||||    
T  33351859 atcaccagaaactgcatttcatcgggagatgcaacttaaagcctcaaaagctgttt-caaggattcacactcgtctaagagtgcagaagactggaaaagt 33351957  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    ||||||| |||||||||||||||         ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  33351958 atagcaa-ggctattttgaaaggattgaaaaacattggatgtttattcttcaaga-gcgttgacatagtacgtttgtacgaagtgtacaatcactatctc 33352055  T
Q  192 cactactcagtttgtgtctctgct 215  Q
    |||||||| |||| ||||||||||    
T  33352056 cactactctgtttttgtctctgct 33352079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 17316467 - 17316678
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaa-ttgcagaagactggaaaagt 100  Q
    |||||||||||||||| ||||||| ||||  |||| |||||||  |||| ||||| | ||||| ||| |||||| |||| |||||||||||| | |||||    
T  17316467 tcaccagaagctgcagatcatcagaagatc-aacctaaagcttcaaaagttgttt-caaggattcaagctcgccaaaaaattgcagaagacttggaaagt 17316564  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
     || || |||||||||||||| |||| |||||||||||  ||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||||      
T  17316565 -taacagcggctattttgaaaagcatcggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactat 17316663  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  17316664 gtttttgtctctgct 17316678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 21618463 - 21618251
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||| ||||| |||  |||||||  |||| |||||    |||| |||||||  ||||| |||| |||||||||||||||    
T  21618463 atcaccagaagctgtagttcatcagaagatgcaacttaaagcttcaaaagttgtttaac-ggattcaaactcttctaaagattgtagaagactggaaaag 21618365  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    || ||||||| |||||||| ||||         ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  21618364 taaagcaacgactattttggaaggatttgaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacct 21618265  T
Q  191 ccactactcagttt 204  Q
    ||||||||| ||||    
T  21618264 ccactactctgttt 21618251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 19832962 - 19833175
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| || |||||||||||||||| |||  |||||||| |||| |||||    |||| |||||||  ||||| ||||||||||||||||||||    
T  19832962 atcaccagaagatgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaac-ggattcaaactcatctaaagattgcagaagactggaaaag 19833060  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    |  ||||||| |||||||||||||         |||||||||||| ||  |||||| ||||||||||||||||||||||||||||||||||| ||||| |    
T  19833061 tgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgtacgaagtgtacaagcactacc 19833160  T
Q  190 tccactactcagttt 204  Q
    |||||||||| ||||    
T  19833161 tccactactctgttt 19833175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 15954919 - 15954702
Alignment:
Q  4 accagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtat 102  Q
    ||||||||||| ||||||||| |||||| |||  |||||||  |||| |||||    |||| |||||||  ||||| ||||||||||||||||||| |      
T  15954919 accagaagctgtagttcatcaagagatgcaacttaaagcttcaaaagctgtttaac-ggattcaaactcttctaaagattgcagaagactggaaaaatga 15954821  T
Q  103 agcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcca 193  Q
    ||||||| ||| |||||||||         ||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||    
T  15954820 agcaacgactaatttgaaaggatttgaaggcattgaatgcttgttattcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctcca 15954721  T
Q  194 ctactcagtttgtgtctct 212  Q
    |||||| |||| |||||||    
T  15954720 ctactctgtttttgtctct 15954702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 19482852 - 19482751
Alignment:
Q  111 ctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    ||||||||||| ||||||||||||||||  ||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| |||||    
T  19482852 ctattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactctgtttttgtct 19482753  T
Q  211 ct 212  Q
    ||    
T  19482752 ct 19482751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 15302340 - 15302196
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  |||||||||||||||||||||         |||||||||||| || ||  || ||||||||||| ||||  ||||||    
T  15302340 attgcagaagactggaaaagtgaagcaacggctattttgaaaggatttaaaggcattggatgcttgttctttgaagagcgttgacattgtacaattgtac 15302241  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
     |||||||||||||||||||||||||||||||| |||||||||||    
T  15302240 aaagtgtacaaccactatctccactactcagttagtgtctctgct 15302196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 20487927 - 20488071
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||| ||||||  |||||||||||||||||||||         |||||||||||| || |||||| |||||||||| |||||||||||||    
T  20487927 attgcagaagactgtaaaagtgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtac 20488026  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||| ||||||||||| ||||||||||| |||| ||| ||||||    
T  20488027 gaagtttacaaccactacctccactactctgtttttgtatctgct 20488071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 24116916 - 24116824
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24116916 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 24116824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 26589812 - 26589595
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| |||||| ||| |||   ||  |||| ||||| | | ||  | |||||||||| ||||| ||||||||| ||| ||    
T  26589812 atcaccagaagctgcagttcatcaagagatggaactcaagttttcaaaagttgttt-caatgactctaactcgcctagaaattacagaagactagaagag 26589714  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattatt--caaaaagcgttgacatagtacgtttgtacgaa-gtgtacaaccactatctccacta 196  Q
    | | ||||| |||| ||||||| |||||||||||| || |||  |||| |||||||||||||||||| |||||||| ||||||||||||||  |||||||    
T  26589713 tgtggcaacagctagtttgaaatgcattggatgctaatgattttcaaagagcgttgacatagtacgtctgtacgaaagtgtacaaccactacttccacta 26589614  T
Q  197 ctcagtttgtgtctctgct 215  Q
    ||| |||| ||||||||||    
T  26589613 ctctgtttctgtctctgct 26589595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 32544357 - 32544261
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||| ||||| |||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  32544357 aaaggcattggatgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttctgtctctgct 32544261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 15987324 - 15987232
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||||||||| || ||  || |||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15987324 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccattactcagtttgtgtctct 15987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16877432 - 16877209
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||| ||| || |||||||||||||||| |||  |||||||  |||| |||||  | |||| |||||||| ||||| ||||||||||||||  ||||    
T  16877432 atcaccaaaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaat-ggattcaaactcgtctaaagattgcagaagactgagaaag 16877334  T
Q  100 tatagcaacggctattttgaaaggc---------attggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||| |||| || |||||          |||||||||| |||  ||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  16877333 tgaagcaacgactatcttaaaaggatttgaaggaattggatgctaattcctcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 16877234  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||| || |||||||    
T  16877233 ccactactctgtttttgcctctgct 16877209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 18378405 - 18378310
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||| | || ||  || |||||||| | |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18378405 aaggcattggatgcatgttctttgaagagcgttgataaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 18378310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 20112761 - 20112852
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 214  Q
    ||||||||||||| || ||  || |||||||||| |||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20112761 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactatctccactactcagtttgtgtctctgc 20112852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 9717935 - 9717841
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctg 213  Q
    ||||||||| ||||||| || |||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  9717935 aaaggcatttgatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctg 9717841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 12715505 - 12715573
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12715505 agcgttgacaaagtacaattgtacgaagtgtagaaccactatctccactactcagtttgtgtctctgct 12715573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 16265211 - 16265303
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || |||||| |||||||| | |||||  ||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  16265211 gcattggatgcttgttcttcaaagagcgttgagaaagtacaattgtacgaagtgtgcaaccactacctccactactctgtttgtgtctctgct 16265303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 22802233 - 22802137
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| || |||||| |||||| ||| |||||  ||||||||||||||||||||||| |||||||||||  ||| ||||||||||    
T  22802233 aaaggcattggatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactacctccactactctatttttgtctctgct 22802137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 13602263 - 13602168
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||| ||  || | |||||||| | |||  ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  13602263 aaggcattggatgcttattctttgaagaacgttgacaaaatacaattgtaagaagtgtataaccactatctccactactcagtttgtgtctctgct 13602168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 15531682 - 15531777
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |||||| |||||||||| |||||  |||||||||| |||||||||||| ||||||||||| || | ||||||||||    
T  15531682 aaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagcgtacaaccactacctccactactctgtctttgtctctgct 15531777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 14100498 - 14100592
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || || ||| |||||||||| |||||  || |||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  14100498 aaggcattggatgcttcttctttaaagagcgttgacaaagtacaattatacgaagtgtacaaccactacctccactactctgttt-tgtctctgct 14100592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 17381592 - 17381517
Alignment:
Q  140 ttcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||| |||||||| || |||| ||||||||||    
T  17381592 ttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaatcactacctccactattctgtttttgtctctgct 17381517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 25594131 - 25594064
Alignment:
Q  148 gcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  25594131 gcgttgacaaagtacaattgtacgaaatgtacaaccactacctccactactcagtttgtgtctctgct 25594064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 29918108 - 29918013
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||  ||||||| || |||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||| ||||    
T  29918108 aaggcatcagatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctatgct 29918013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 19624025 - 19623975
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19624025 ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctttgct 19623975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 21625192 - 21625114
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
    ||||||||| |||||| || |||||| |||||| ||| |||||  ||||||||||||||||||||||||||||||||||    
T  21625192 aaggcattgcatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactatctccactact 21625114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 26972285 - 26972379
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||| || || |||||| |||||||||| |||||  |||  |||||||||||||||||| |||||||||||||| | ||||||||||    
T  26972285 aaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattg--cgaagtgtacaaccactacctccactactcagtatttgtctctgct 26972379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 20730713 - 20730853
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| ||| |||||||||         ||||||||| || || |||||| |||||||||| |||||  ||||||    
T  20730713 attgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtac 20730812  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctc 211  Q
     |||||||||||||||| ||||||| ||| |||| ||||||    
T  20730813 aaagtgtacaaccactacctccactgctctgtttttgtctc 20730853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 23284628 - 23284564
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctc 211  Q
    |||||||||| |||||  |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  23284628 agcgttgacaaagtacaattgtacgaagtgtataaccattatctccactactcagtttgtgtctc 23284564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 18435647 - 18435552
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |||||| |||||||||| |||||   ||||| |||||||||||||||| ||||| ||| | |||| ||||||||||    
T  18435647 aaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacaaagtgtacaaccactacctccagtacactgtttttgtctctgct 18435552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 21235216 - 21235137
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||| ||||||| || |||||| |||||||||| |||||  ||||| ||||||||||||||||| |||||||||||    
T  21235216 aaggcattcgatgcttgttcttcaaagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactc 21235137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 13435599 - 13435544
Alignment:
Q  144 aaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||||||||||||| |||||  ||||||||||||||||||||||| |||||||||||    
T  13435599 aaaagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 13435544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 19688857 - 19688790
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccacta 187  Q
    ||||||||||||| || || |||||| |||||||||| |||||  |||||||||||||| ||||||||    
T  19688857 aaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccacta 19688790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 26943667 - 26943572
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || ||||||| |  |||||  |||||||||||||||||||||||  |||||||||| |||| ||||| ||||    
T  26943667 aaggcattggatgcttgttctttgaagagcgttggcgaagtacaattgtacgaagtgtacaaccactacttccactactctgtttttgtctttgct 26943572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20730634 - 20730677
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctt 44  Q
    ||||| |||||||||||||||||||||||||||||  |||||||    
T  20730634 atcactagaagctgcagttcatcaggagatgtaacaaaaagctt 20730677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 10640522 - 10640555
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactact 198  Q
    ||||||||||||||||||||||| ||||||||||    
T  10640522 ttgtacgaagtgtacaaccactacctccactact 10640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21235332 - 21235288
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagcttt 45  Q
    ||||| ||||||||||||||||||||||||| |||  ||||||||    
T  21235332 atcactagaagctgcagttcatcaggagatgcaacataaagcttt 21235288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 1e-61; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 21605604 - 21605818
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||| ||||||||||||||||||| |||  |||||||  |||| ||||| | ||||  | |||||||||| ||||||||||||||||||||||    
T  21605604 atcaccagaagttgcagttcatcaggagatggaacttaaagcttcaaaagttgttt-caaggactctaactcgcctagaaattgcagaagactggaaaag 21605702  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||  ||||| ||||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21605703 tatgacaacgactattttgaaatgcattggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactatctccactactc 21605802  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  21605803 tgtttttgtctctgct 21605818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 46796318 - 46796531
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||| ||||||||||||||||||||||||| |||  |||||||  |||| |||||   ||||| |||||||| |||| |||||||||||||||||||||    
T  46796318 atcacaagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaa-aggattcaaactcgtctaagattgcagaagactggaaaagt 46796416  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    ||  ||||||||| ||||||||||||| ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  46796417 attacaacggctaatttgaaaggcattagatacttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactacttt 46796516  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  46796517 gtttttgtctctgct 46796531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 21636620 - 21636834
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    |||||||||||  ||||||||||||||| || |||  |||||||  |||| ||||| | ||||  | |||||||||| ||||||||||||||||||||||    
T  21636620 atcaccagaagtggcagttcatcaggagttggaacttaaagcttcaaaagctgttt-caaggactctaactcgcctagaaattgcagaagactggaaaag 21636718  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| |||||| ||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  21636719 tatggcaacgactattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactc 21636818  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  21636819 tgtttttgtctctgct 21636834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 30054167 - 30054381
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    |||||||||| || ||||||||||||||||| ||  ||||||||  |||| ||||| | || || ||||||||||||||||||||||||||| |||||||    
T  30054167 atcaccagaaacttcagttcatcaggagatgcaattcaaagcttcaaaagctgttt-caagaattcaaactcgcctaaaattgcagaagacttgaaaagt 30054265  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||||||||| ||| ||||||||||||||| ||||||||   ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  30054266 atagcaacgactactttgaaaggcattgggtgcttattcaacaaaagagcgttgacatagtacgtttgtacgaaatgtacaaccactaactccactactc 30054365  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  30054366 tgtttttgtctctgct 30054381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 21641084 - 21640865
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||| ||||||||||||||||||| |||  ||||| |  |||| ||||| | ||||| ||||||||||||| |||| ||||||||||||||||    
T  21641084 atcaccagaagttgcagttcatcaggagatgcaacttaaagcctcaaaagctgttt-caaggattcaaactcgcctaagattgtagaagactggaaaagt 21640986  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    |||||||||||||||||| ||||         ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  21640985 atagcaacggctattttggaaggattgaaaagcattggatgcttatttttcaaagagcgttgacatagtacgtttttacgaagtgtacaaccactatctc 21640886  T
Q  192 cactactcagtttgtgtctct 212  Q
    ||||||||  ||| |||||||    
T  21640885 cactactctatttttgtctct 21640865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 49666356 - 49666569
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| ||||| | ||||| |||||||| |||| |||||||||||||||||||||    
T  49666356 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgttt-caaggattcaaactcgtctaagattgcagaagactggaaaagt 49666454  T
Q  101 atagcaacggctattttgaaaggcattggatg-cttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    ||| ||||| ||||||||||||| |||| | | | |||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49666455 ataacaacgactattttgaaagg-attgaaagacatattcttcaaagagcattgacatattacgtttgtacgaagtgtacaaccactatctccactactc 49666553  T
Q  200 agtttgtgtctctgct 215  Q
     | || ||||||||||    
T  49666554 tgattctgtctctgct 49666569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 40851177 - 40850991
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    ||||||||||||| ||||||||||||||||| |||  |||||||  |||| || || | ||||  | |||||||||| ||||||||||||||||||||||    
T  40851177 atcaccagaagctacagttcatcaggagatggaacttaaagcttcaaaagctggtt-caaggactctaactcgcctagaaattgcagaagactggaaaag 40851079  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccacta 187  Q
    ||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  40851078 tatggcaacgactattttgaaatgcattggatgcttattcttcaaagagcgttgacatagtatgtttgtacgaagtgtacaaccacta 40850991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 14955645 - 14955433
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||  |||| |||||  | |||| |||||||| ||||| |||||||||||||||||| |    
T  14955645 atcaccagaagttgcagttcatcaggagatgtaactcaaagcttcaaaagctgtttaat-ggattcaaactcgtctaaagattgcagaagactggaaagg 14955547  T
Q  100 tatagcaacggctattttgaaag---------gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    || ||||||  ||||||||||||         |||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  14955546 taaagcaacaactattttgaaagtatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 14955447  T
Q  191 ccactactcagttt 204  Q
    ||||||||| ||||    
T  14955446 ccactactctgttt 14955433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 9699989 - 9700200
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcct-aaaattgcagaagactggaaaagt 100  Q
    |||||||||||||||| ||||||| ||||  |||| |||||||  |||| ||||| | ||||| ||| ||||||  |||||||||||||||| | |||||    
T  9699989 tcaccagaagctgcagatcatcagaagatc-aacctaaagcttcaaaagttgttt-caaggattcaagctcgccagaaaattgcagaagacttggaaagt 9700086  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
     || ||||| ||||||||||| ||||||||||||||||  ||||  |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||     
T  9700087 -taacaacgactattttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtataaccactatctgcactactct 9700185  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  9700186 gtttttgtctctgct 9700200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 1727966 - 1728179
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcct-aaaattgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||  |||  | || ||  |||| ||||| | ||||| ||| ||||||  ||||||||| |||||| | ||||    
T  1727966 atcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagttgttt-caaggattcaatctcgccagaaaattgcaaaagacttggaaag 1728064  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    | || ||||||||||||||||| ||||||||||||||||  ||||  | | |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  1728065 t-taacaacggctattttgaaaagcattggatgcttattcctcaaggaacattgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactc 1728163  T
Q  200 agtttgtgtctctgct 215  Q
     |||| ||||||||||    
T  1728164 tgtttttgtctctgct 1728179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 20627372 - 20627595
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| ||||||||||||||||||| |||  |||||||  ||||||||||  | |||| |||||||| ||||  ||||||||||||||||||||    
T  20627372 atcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagatgtttaat-ggattcaaactcgtctaatgattgcagaagactggaaaag 20627470  T
Q  100 tatagcaacggctattttgaa---------aggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||  ||||||||||         ||||||||||||||| ||  ||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  20627471 tgaagcaacaactattttgaatggatttgaaggcattggatgcttgtttatcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 20627570  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||  |||| | ||||||||    
T  20627571 ccactactttgtttttatctctgct 20627595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 204
Target Start/End: Complemental strand, 5213789 - 5213583
Alignment:
Q  6 cagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtatag 104  Q
    ||||||||| |||||||||||||||| |||  |||||||  |||| |||||    |||| ||||||||  |||| |||||||||||||||||||||||||    
T  5213789 cagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaac-ggattcaaactcgtataaagattgcagaagactggaaaagtatag 5213691  T
Q  105 caacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccact 195  Q
    ||||  |||||||| ||||         |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  5213690 caacaactattttggaaggatttgaaggcattagatgcttattattcaaaa-gcgttgacgtagtacgtttgtacgaagtgtacaaccactacctccact 5213592  T
Q  196 actcagttt 204  Q
    |||| ||||    
T  5213591 actctgttt 5213583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 24775473 - 24775698
Alignment:
Q  1 atcaccagaagctgc--agttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaa 97  Q
    |||||||||||||||  |||||||||||||||| |||  |||||||  |||| |||||    |||| |||||||| ||||| ||||||||||||||||||    
T  24775473 atcaccagaagctgcgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaac-ggattcaaactcgtctaaagattgcagaagactggaaa 24775571  T
Q  98 agtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactat 188  Q
    |||  ||||||  |||||||||||||         ||||| ||||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||||     
T  24775572 agtgaagcaacaactattttgaaaggatttgaaggcattgaatgcttattcttcaaagagctttgacaaagtacgtttgtacgaagtgtacaaccactac 24775671  T
Q  189 ctccactactcagtttgtgtctctgct 215  Q
     |||||||||| |||| ||||||||||    
T  24775672 atccactactctgtttttgtctctgct 24775698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 2785283 - 2785075
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||| || |||||||||||||||| |||  |||||||  |||| |||||    |||| |||||||| ||||| ||||||||||||||||||||    
T  2785283 atcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaac-ggattcaaactcgtctaaagattgcagaagactggaaaag 2785185  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    |  ||||||  |||||||||||||         |||||||||||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  2785184 tgaagcaacaactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacc 2785085  T
Q  190 tccactactc 199  Q
    ||||||||||    
T  2785084 tccactactc 2785075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 53056747 - 53056891
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| |||||||||||||         |||||||||||| || |||||| |||||| ||| |||||||||||||    
T  53056747 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgtttacaaagtacgtttgtac 53056846  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||    
T  53056847 gaagtgtacaaccactacctccactactctgtttttgtctctgct 53056891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 29855499 - 29855404
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||    
T  29855499 aaggcattggatgcttgttcttcaaaaagcgttgacagagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttatctctgct 29855404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 11223702 - 11223559
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||| ||||||  ||||||| |||||||||||||         |||||||||||| || |||||| |||||||||| |||| ||||||||    
T  11223702 attgcagaagactgaaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtatgtttgtac 11223603  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  11223602 gaagtgtacaaccactatctccactactctgttt-tgtctctgct 11223559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 13780653 - 13780748
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| |||||  || |||||||||| |||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13780653 aaggcattggatgcttgttatttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccacgactcagtttgtgtctctgct 13780748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 47207925 - 47207701
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa--attgcagaagactggaaaa 98  Q
    ||||||||||||||||||||||||||||||| |||  ||| |||  || | ||||   | ||||  || |||| |||||  |||||||||||||||||||    
T  47207925 atcaccagaagctgcagttcatcaggagatgcaacataaaacttcaaaggttgttcaat-ggatttaatctcgtctaaagcattgcagaagactggaaaa 47207827  T
Q  99 gtatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatc 189  Q
    ||  ||||||||||| |||||||         |||||||||||||| || |||||| |||||||||| |||||  ||||||||||||||||||||||| |    
T  47207826 gtgaagcaacggctagtttgaaatgatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacc 47207727  T
Q  190 tccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||| ||||| ||||    
T  47207726 tccactactctgtttttgtctttgct 47207701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 20646241 - 20646149
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || ||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20646241 gcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactacctccactactcagtttgtgtctctgct 20646149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 41495138 - 41494994
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||         |||||||||||| || ||  || |||||||||| |||||  ||||||    
T  41495138 attgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtac 41495039  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  41495038 gaagtgtacaaccactatctccactactcagtttgtgtatctgct 41494994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 22140850 - 22140759
Alignment:
Q  124 cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||| || |||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||| |||| ||||||||||    
T  22140850 cattggatgcttgttcttcaaagagcgttgacatagtacgtatgtacgaagtgtataaccactacctccactactctgtttttgtctctgct 22140759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 37467423 - 37467328
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37467423 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactacccagtttgtgtctctgct 37467328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 12963149 - 12963249
Alignment:
Q  114 ttttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctg 213  Q
    ||||||||| |||||||||||| || ||  || || |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12963149 ttttgaaag-cattggatgcttgttctttgaagagtgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagtatgtgtctctg 12963247  T
Q  214 ct 215  Q
    ||    
T  12963248 ct 12963249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 14969466 - 14969341
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||| ||||||  |||||||||||||         ||||||||||||||| |||||| |||||||||| ||||| ||| |||    
T  14969466 attgcagaagactggaagagtaaagcaacaactattttgaaaggatttgatggcattggatgcttattcttcaaatagcgttgacaaagtacatttttac 14969367  T
Q  171 gaagtgtacaaccactatctccacta 196  Q
    ||||||||||||||||||||||||||    
T  14969366 gaagtgtacaaccactatctccacta 14969341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 14393076 - 14393168
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14393076 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtgtctctgct 14393168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 16658690 - 16658782
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| ||  || |||||||||||| |||  ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  16658690 gcattggatgcttattctttgaagagcgttgacataatacaattgtacgaagtgtacaaccactacctccactacttagtttgtgtctctgct 16658782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 49642782 - 49642926
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||         ||||||||| || || ||  || |||||||||| |||||  ||||||    
T  49642782 attgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgattgttcttttaagagcgttgacaaagtacaattgtac 49642881  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  49642882 aaagtgtacaaccactatctccactactcagtttgtgtctctgct 49642926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 28582194 - 28582103
Alignment:
Q  122 ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctg 213  Q
    |||||||||||||| || |||||| |||||||||| | |||  ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  28582194 ggcattggatgcttgttcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactcagtttttgtctctg 28582103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 212
Target Start/End: Complemental strand, 13948475 - 13948334
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||         |||||||||||| || ||  || ||||||||||||||||  ||||||    
T  13948475 attgcagaagactggaatagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtac 13948376  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||||||| |||||||| ||||||| ||||||||||    
T  13948375 gaagtgtacaaccattatctccattactcaggttgtgtctct 13948334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 33583369 - 33583240
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaa-agcgttgacatagtacgtttgta 169  Q
    |||| ||||||||||||||||  |||||||||||||||||||||         |||||||||||| ||  |||||| |||||||||| ||||||||||||    
T  33583369 attgtagaagactggaaaagtgaagcaacggctattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgta 33583270  T
Q  170 cgaagtgtacaaccactatctccactactc 199  Q
    |||||||||||||||||| ||||| |||||    
T  33583269 cgaagtgtacaaccactacctccaatactc 33583240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 31303449 - 31303381
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31303449 agcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactcagtttgtgtctctgct 31303381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 6090822 - 6090727
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||| |||||| || || ||||||| |||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  6090822 aaggcattgaatgcttgttctttaaaaagctttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 6090727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 210
Target Start/End: Complemental strand, 37412759 - 37412605
Alignment:
Q  55 tttctaggatacaaactcgcctaaaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttga 154  Q
    |||| ||||| ||| ||||||| || ||||||||  || | ||||| | |||||||||||||||||| |||||||||||||| |  |  |  || |||||    
T  37412759 tttcaaggattcaagctcgcctgaagttgcagaaatcttggaaagttt-gcaacggctattttgaaaagcattggatgcttaatcctataggagagttga 37412661  T
Q  155 catagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    ||| || |||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  37412660 cattgtgcgtttgtacgaaatgtacaaccactatctccactactctgtttctgtct 37412605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 40799964 - 40799869
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||| ||||||| ||| || |||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  40799964 aaggaattggatacttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 40799869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 11868338 - 11868264
Alignment:
Q  141 tcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  11868338 tcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 11868264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 18121690 - 18121786
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||| || |||||| |||||| ||| |||||  ||||||||||||||||||||||| ||||||||||| || | ||||||||||    
T  18121690 aaaggcattgaatgctttttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtgtttgtctctgct 18121786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 18142820 - 18142916
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||| || |||||| |||||| ||| |||||  ||||||||||||||||||||||| ||||||||||| || | ||||||||||    
T  18142820 aaaggcattgaatgctttttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtgtttgtctctgct 18142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 22804119 - 22804187
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  22804119 agcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactcaatttgtgtctctgct 22804187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 16032615 - 16032520
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || ||| |||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  16032615 aaggcattggatgcttgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 16032520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 38177712 - 38177791
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactc 199  Q
    |||||||||||||||| || || ||| |||||||||| |||||  ||||||||||||||||||||||| |||||||||||    
T  38177712 aaggcattggatgcttgttctttaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 38177791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 49553558 - 49553653
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || || |||| | |||||||||| |||||  ||||||||||||||||||||||| |||||||||||  ||| ||||||||||    
T  49553558 aaggcattggatgtttgttcttcagagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctatttttgtctctgct 49553653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 2561273 - 2561183
Alignment:
Q  125 attggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||| || |||||| | |||||||| |||||   |||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  2561273 attggatgcttgttcttcaaagatcgttgacaaagtacaagtgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 2561183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 11909093 - 11909171
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
    ||||||||||||||||||  |||||| |||||||||| ||||||| | |||||||||||| ||||||| ||||||||||    
T  11909093 aaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctttacgaagtgtacgaccactacctccactact 11909171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 15903257 - 15903196
Alignment:
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||| |||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  15903257 ttgacaaagtacaattgtacgaagtgtacaacaactatctccactactcagtttgtgtctct 15903196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 17239018 - 17239083
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  17239018 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtatctct 17239083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 25398344 - 25398419
Alignment:
Q  140 ttcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| |||||||||| || ||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  25398344 ttcaaagagcgttgacaaagcacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 25398419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 29951507 - 29951602
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || || ||| ||| |||||  |||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  29951507 aaggcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatctccaccactcagtttgagtctctgct 29951602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 30000661 - 30000756
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || || ||| ||| |||||  |||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  30000661 aaggcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatctccaccactcagtttgagtctctgct 30000756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 47405490 - 47405585
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| |||| || || |||||| || ||||||| |||||  ||||||||||||||||||||||| ||||||||||  |||| ||||||||||    
T  47405490 aaggcatttgatgtttgttcttcaaagagtgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactatgtttttgtctctgct 47405585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 12388941 - 12389035
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 214  Q
    |||||||||||||||| || ||  || ||||||| || || ||  ||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  12388941 aaggcattggatgcttcttctttgaagagcgttggcaaaggacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgc 12389035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 19889045 - 19889107
Alignment:
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  19889045 ttgacatattacaattgtacgaagtgtacaaccactatctccac--ctcagtttgtgtctctgct 19889107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 12726302 - 12726394
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||| | || ||| || ||| ||| |||||  |||||| |||||||||||||||| ||||||||||| |||| ||||||||||    
T  12726302 gcattggatgcttactctttaaagagagttaacaaagtacaattgtacaaagtgtacaaccactacctccactactctgtttttgtctctgct 12726394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 13824159 - 13824092
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccacta 187  Q
    ||||||||||||| || || |||||| |||||||||| |||||  |||||||||||||||||||||||    
T  13824159 aaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 13824092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 198
Target Start/End: Original strand, 46349864 - 46349991
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| ||| |||||||||         |||||||||||| || |||| | | | |||||| |||||| ||||||    
T  46349864 attgcagaagactggaaaagtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttcttcagagaacattgacaaagtacgattgtac 46349963  T
Q  171 gaagtgtacaaccactatctccactact 198  Q
    ||||||||||||||||  ||||||||||    
T  46349964 gaagtgtacaaccactgcctccactact 46349991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 45858818 - 45858875
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgt 177  Q
    ||||||||||||||||||  |||||| |||||||||| ||||||| ||||||||||||    
T  45858818 aaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgt 45858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 50300286 - 50300246
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccacta 187  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  50300286 agcgttgacaaagtacgtttgtacgaagtgtacaaccacta 50300246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 23538235 - 23538312
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactac 197  Q
    ||||||||| ||||||||| || | | | |||||| | || ||  |||||||||||||||||||||||||||||||||    
T  23538235 aaggcattgaatgcttattctttagagaacgttgaaaaaggacaattgtacgaagtgtacaaccactatctccactac 23538312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 12968348 - 12968312
Alignment:
Q  168 tacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||||||||||||||||||||||||||| ||||    
T  12968348 tacgaagtgtacaaccactatctccactactctgttt 12968312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 52920496 - 52920403
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctg 213  Q
    |||||||| ||||||| || || ||| |||||||||| | ||   ||||||||||| ||||||||||| ||| ||||| | |||| ||||||||    
T  52920496 aaggcatttgatgcttgttctttaaagagcgttgacaaattaaaattgtacgaagtatacaaccactacctctactaccctgtttttgtctctg 52920403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 13557809 - 13557777
Alignment:
Q  172 aagtgtacaaccactatctccactactcagttt 204  Q
    |||||||||||||||||||||||||||| ||||    
T  13557809 aagtgtacaaccactatctccactactctgttt 13557777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 17667 - 17880
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||| || |||||||||||||  |||  |||||||  |||| ||||| | ||||| |||||||| |||| |||||||||||||  ||||||    
T  17667 atcaccagaagcttcaattcatcaggagatacaacttaaagcttcaaaagctgttt-caaggattcaaactcgtctaagattgcagaagactacaaaagt 17765  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    ||||||||| |||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  17766 atagcaacgtctattttgaaaggcattggatgcttatccttcaaagagcgttgacatagtacgtttgtatgaagtgtacaaccactatctccactactct 17865  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  17866 gtttttgtctctgct 17880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 2604 - 2806
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    |||||||||| |||||||||||||||| ||| |||| |||| ||  |||| ||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  2604 atcaccagaaactgcagttcatcaggaaatgcaacctaaagtttcaaaagctgttt-caaggattcaaactcgcctaaaattgcagaagactggaaaagt 2702  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    ||||||||||||||||||||| |||||||||||||           ||||||||||||||||||||||| ||||||||||||||||| |||||||||||     
T  2703 atagcaacggctattttgaaaagcattggatgctt-----------agcgttgacatagtacgtttgtatgaagtgtacaaccactaactccactactct 2791  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  2792 gtttttgtctctgct 2806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 101; Significance: 3e-50; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 9778 - 9559
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| ||||| | ||||| |||||| | |||| ||||||||||||||| |||||    
T  9778 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgttt-caaggattcaaacttgtctaagattgcagaagactgggaaagt 9680  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    ||||||||| |||||||||||||         ||||||||||||||| | |||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  9679 atagcaacgactattttgaaaggattgaagggcattggatgcttattctacaaacagcgttgacatagtacgactgtacgaagtgtacaaccactatctc 9580  T
Q  192 cactactcagtttgtgtctct 212  Q
    |||||||| |||| |||||||    
T  9579 cactactctgtttttgtctct 9559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 215
Target Start/End: Original strand, 22088 - 22246
Alignment:
Q  67 aaactcgcctaaa-attgcagaagactggaaaagtatagcaacggctat-tttgaa--------aggcattggatgcttattattcaaaaagcgttgaca 156  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| |||| ||||||        |||||||||||||||||| |||||  ||||||||||    
T  22088 aaactcgtctaaagattgcagaagactggagaagtatagcaacgactatctttgaaggattggaaggcattggatgcttattcttcaatgagcgttgaca 22187  T
Q  157 tagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    || |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  22188 taatacgtttgtacgaagtgtacaaccactatctccagtactctgtttttgtctctgct 22246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 19171 - 19027
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttg---------aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||||||||||||         ||||||||| ||||||| || |||||| |||||||  | |||||   |||||    
T  19171 attgcagaagactggaagagtgaagcaacggctattttggaaggatttaaaggcatttgatgcttgttcttcaaagagcgttggaaaagtacaagtgtac 19072  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  19071 gaagtgtacaaccactacctccactactcagtttttgtctctgct 19027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 723 - 935
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaagt 100  Q
    ||||||||| |||||||||||||||||||| |||  |||| ||  |||| ||||| | ||||  | |||||| ||| ||||||||||||||| |||||||    
T  723 tcaccagaaactgcagttcatcaggagatgaaacttaaagtttcaaaagctgttt-caaggactctaactcgtctataaattgcagaagactagaaaagt 821  T
Q  101 atagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactca 200  Q
    || ||||| |||||||||||| | |||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||     
T  822 atggcaacagctattttgaaatgtattggatgcttattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccactacttccactactct 921  T
Q  201 gtttgtgtctctgct 215  Q
    |||| ||||||||||    
T  922 gttt-tgtctctgct 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 8150 - 7963
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||| |||||||||  |||||||  |||| ||||| | ||||| |||||||| |||| |||||||||||||||||||||    
T  8150 atcaccagaagctgcagttcatcagaagatgtaacttaaagcttcaaaagctgttt-caaggattcaaactcgtctaagattgcagaagactggaaaagt 8052  T
Q  101 atagcaacggctattttgaaag---------gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtaca 180  Q
    ||||||||| ||||||||||||         ||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  8051 atagcaacgactattttgaaaggattgaattgcattcgatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtaca 7963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 87 - 1
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaa 88  Q
    ||||||||||||||||||||||||| |||||||||  |||||||  |||| || |||| ||||| |||||||| |||| |||||||||    
T  87 atcaccagaagctgcagttcatcagaagatgtaacttaaagcttcaaaagctg-tttcaaggattcaaactcgtctaagattgcagaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 61022 - 60802
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaa-ttgcagaagactggaaaag 99  Q
    ||||||||||| || |||||||||||||||| |||  ||| |||  |||| |||||   |||||  ||||||| |||||| |||||||||||||||||||    
T  61022 atcaccagaagttgtagttcatcaggagatgcaacttaaaacttcaaaagttgtttaa-aggatttaaactcgtctaaaaattgcagaagactggaaaag 60924  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    ||||||||||||||||||| ||||         ||||| |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  60923 tatagcaacggctattttggaaggattggaaggcattgaatgcttgttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 60824  T
Q  191 ccactactcagtttgtgtctct 212  Q
    ||||||||| |||| |||||||    
T  60823 ccactactctgtttttgtctct 60802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 7048 - 7260
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||| |||||   ||||| ||||| || || || ||||||||||||||||||||    
T  7048 atcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttga-aggattcaaacccgtctgaagattgcagaagactggaaaag 7146  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||||||||| |||||||| ||||         ||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  7147 tatagcaacgactattttggaaggattggaaagcattggatgcttattcttcaaacaacgttgacatggtacgtttgtacgaagtgtacaaccactatct 7246  T
Q  191 ccactactcagttt 204  Q
    ||||||||| ||||    
T  7247 ccactactctgttt 7260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 87578 - 87715
Alignment:
Q  78 aaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgt 177  Q
    |||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||  ||| |||||| |||||||||||||||||| ||||||||||||    
T  87578 aaattgcagaagactgaaaaagtatggcaacgactattttgaaatgcattggatgcaaattcttcaaagagcgttgacatagtacgtctgtacgaagtgt 87677  T
Q  178 acaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||  |||||||||| |||| ||||||||||    
T  87678 acaaccactacttccactactctgtttctgtctctgct 87715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 215389 - 215612
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||| ||||||||||| |||  ||| |||  |||| |||||  | |||| |||||||| ||||| ||||||||||||| ||||||    
T  215389 atcaccagaagctgcagtttatcaggagatgcaacttaaaacttcaaaagctgtttaat-ggattcaaactcgtctaaagattgcagaagactagaaaag 215487  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  |||||||||||||||||||||         |||||||||||| || |||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  215488 tgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 215587  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||||||| ||||  |||||||||    
T  215588 ccactactctgttttcgtctctgct 215612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 9373 - 9151
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||| || |||||||||||||||| |||  |||||||  |||| |||||    |||| |||||||  | || ||||||||||| |||||||||    
T  9373 atcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaac-ggattcaaactcatcaaagattgcagaagattggaaaagt 9275  T
Q  101 atagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 191  Q
    ||||||||| |||||||| ||||         ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9274 atagcaacgactattttggaaggattagaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 9175  T
Q  192 cactactcagtttgtgtctctgct 215  Q
    |||||||  |||| ||||| ||||    
T  9174 cactactgtgtttttgtctatgct 9151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 2702 - 2845
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg--------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacg 171  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||        |||||||||| |||| |||||| || ||||||||||||||||||||||    
T  2702 attgcagaagactggaaaagtattgcaacgactattttggaaggttggaaagcattggatgcgtattcttcaaagagtgttgacatagtacgtttgtacg 2801  T
Q  172 aagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  2802 aagtgtacaaccactatctccactactctgtttttgtctctgct 2845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 3523 - 3300
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||  |||||||||||||||| |||  |||||||  |||| |||||    |||| |||||||| ||||| ||||||||||| ||||||||    
T  3523 atcaccagaagctatagttcatcaggagatgcaacttaaagcttcaaaagctgtttaac-ggattcaaactcgtctaaagattgcagaagattggaaaag 3425  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |||| |||||||||||||| ||||         ||||||||| ||||| |||||| |||||||| ||||||||||||||| |||||||||||||||| ||    
T  3424 tataacaacggctattttggaaggatttgaaggcattggatgtttattcttcaaagagcgttgatatagtacgtttgtacaaagtgtacaaccactacct 3325  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||||| ||| |||| ||||||||||    
T  3324 ccactgctctgtttttgtctctgct 3300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 99159 - 99320
Alignment:
Q  61 ggatacaaactcgcctaaaattgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgt 151  Q
    |||| |||||||| ||||| ||||||| ||| ||||||||||||||||| |||||||| ||||         ||||||||||||||| ||||||  |||     
T  99159 ggattcaaactcgtctaaagttgcagatgaccggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttcaaa--gcgc 99256  T
Q  152 tgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  99257 tgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 99320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 19495 - 19584
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||| || ||  || |||||||||||| |||  |||||||||||||||||||||||| | |||||||||||||||||||||    
T  19495 gcattggatgcttgttctttgaagagcgttgacataatacaattgtacgaagtgtacaaccactatattcactactcagtttgtgtctct 19584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 77; Significance: 7e-36; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 211558 - 211394
Alignment:
Q  61 ggatacaaactcgcctaaa-attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcg 150  Q
    |||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||||| ||||         |||| |||||||||| |||||| ||||    
T  211558 ggattcaaactcgtctaaagattgcagaagactggaaaagtatagcaacgactattttgtaaggattttaatgcatttgatgcttattcttcaaagagcg 211459  T
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||||||||||    
T  211458 ttgacatagtacgtttgtacgaagtatacaactactacctccactactctgtttttgtctctgct 211394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 377579 - 377674
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || ||| |||||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  377579 aaggcattggatgcttgttctttgaagagcattgacaaagtacaattgtaccaagtgtacaaccactatctccactactcagtttgtgtctctgct 377674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 220326 - 220234
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| |||||  || |||||||||| |||||  |||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  220326 gcattggatgcttgttatttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactacctccactactcagtttgtgcctctgct 220234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 244308 - 244390
Alignment:
Q  124 cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgt 206  Q
    |||||||||||| || ||  || |||||||| | || ||  ||||||||||||||||||||||| ||||||||||| ||||||    
T  244308 cattggatgcttgttctttgaagagcgttgaaaaaggacaattgtacgaagtgtacaaccactacctccactactctgtttgt 244390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 7525 - 7377
Alignment:
Q  68 aactcgccta-aaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgttt 166  Q
    |||||||||| ||||| |||||||||| || ||| | |||||||||| ||||||| |||||||||||| |||  ||||| |||||||||||||||| |||    
T  7525 aactcgcctagaaattacagaagactgaaagagtgtggcaacggctagtttgaaatgcattggatgctaattcatcaaagagcgttgacatagtacattt 7426  T
Q  167 gtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||  |||||||||| |||| |||| |||||    
T  7425 gtacgaagtgtacaaccactacttccactactctgtttttgtccctgct 7377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 5225 - 5424
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    ||||||||||||||||||||||||||||||  |||  | || ||  |||| ||||||  ||||  | |||||||||||| |||||||||||||||||| |    
T  5225 atcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagctgtttta-aggactctaactcgcctaaagattgcagaagactggaaatg 5323  T
Q  100 tatagcaacggctattttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgta-cgaagtgtacaaccactatctccactact 198  Q
    | | ||||| |||||||||||| ||||||||||| |||| |||||| |||||||||||||||||| ||||   ||||||||||||||||  |||||||||    
T  5324 tgtggcaacagctattttgaaatgcattggatgcctattcttcaaagagcgttgacatagtacgtatgtagaaaagtgtacaaccactacttccactact 5423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 78258 - 78481
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| ||||||||| |||||| | |  |||||||  |||| | |||  | |||| |||||||| ||||| ||||||||||||||||||||    
T  78258 atcaccagaagctgtagttcatcatgagatgcagcttaaagcttcaaaagctattta-tcggattcaaactcgtctaaagattgcagaagactggaaaag 78356  T
Q  100 tatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  ||||||| |||||||||||||         ||||||||||||||| || ||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  78357 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttattctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacct 78456  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
     |||||||  |||| ||||||||||    
T  78457 acactactatgtttttgtctctgct 78481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 25415 - 25514
Alignment:
Q  116 ttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||| ||||||||||  ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  25415 ttgaagggcattggatagttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 25514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23455 - 23551
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaa 98  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| || |||| ||||| |||||||| |||| |||||||||||||||||||    
T  23455 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctg-tttcaaggattcaaactcgtctaagattgcagaagactggaaaa 23551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 15811 - 15854
Alignment:
Q  172 aagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  15811 aagtgtacaaccactatctccactactctgtttttgtctctgct 15854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 215
Target Start/End: Original strand, 1598 - 1814
Alignment:
Q  8 gaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaagtatagca 106  Q
    |||||||||||||||||||||||| ||| ||||||||  |||| |||||  | |||| ||||||||  |||| ||||||||||||| |||||||  ||||    
T  1598 gaagctgcagttcatcaggagatgcaactcaaagcttcaaaagctgtttaat-ggattcaaactcgtttaaatattgcagaagacttgaaaagtgaagca 1696  T
Q  107 acggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactac 197  Q
    ||| |||||||||||||         || |||||| || || |||||| |||||||||| ||||||||| |||||||||||||||||||| || |||| |    
T  1697 acgactattttgaaaggatttgaaggcactggatgattgttcttcaaagagcgttgacaaagtacgtttttacgaagtgtacaaccactaccttcactgc 1796  T
Q  198 tcagtttgtgtctctgct 215  Q
    || |||| ||||||||||    
T  1797 tctgtttttgtctctgct 1814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 79 - 215
Target Start/End: Complemental strand, 60157 - 60012
Alignment:
Q  79 aattgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgta 169  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||         |||||||||||| || ||  || ||||||||||||||||  |||||    
T  60157 aattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaagccattggatgcttgttctttgaagagcgttgacatagtacaattgta 60058  T
Q  170 cgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||    
T  60057 cgaagtgtacaaccactatctcttctactcagtttgtgtctctgct 60012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 8066 - 7922
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||| ||||||||| ||||||  ||||||| |||||||||||||         |||||||||||| || ||  || ||||||||||||||||  ||||||    
T  8066 attgtagaagactgtaaaagtgaagcaacgactattttgaaaggatttgaattcattggatgcttgttctttgaagagcgttgacatagtacaattgtac 7967  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||||  ||||||||||||||||    
T  7966 gaagtgtacaaccactatctccactacgaagtttgtgtctctgct 7922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 6632 - 6855
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaa-attgcagaagactggaaaag 99  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||| |||||    |||| |||||| | ||||  ||||||||||||||||||||    
T  6632 atcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaac-ggattcaaacttgtctaaggattgcagaagactggaaaag 6730  T
Q  100 tatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 190  Q
    |  |||| || |||||||||||         |||||||||||||| || |||||| ||| |||||| |||||||||||||||||||||||||||||| ||    
T  6731 tgaagcaccgactattttgaaaagatttgaaggcattggatgcttgttcttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacct 6830  T
Q  191 ccactactcagtttgtgtctctgct 215  Q
    ||| |||||  ||| ||||||||||    
T  6831 ccagtactctatttttgtctctgct 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 65321 - 65484
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| | ||| | ||||| |||||||| |||| |||||||||||||||||||||    
T  65321 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctattt-caaggattcaaactcgtctaagattgcagaagactggaaaagt 65419  T
Q  101 atagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgaca 156  Q
    |||| |||| |||||||||||         ||||||||||||||||| |||||| ||||||||||    
T  65420 atagaaacgactattttgaaaggattaaagggcattggatgcttattcttcaaagagcgttgaca 65484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 144366 - 144529
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaaaattgcagaagactggaaaagt 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||| | ||| | ||||| |||||||| |||| |||||||||||||||||||||    
T  144366 atcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctattt-caaggattcaaactcgtctaagattgcagaagactggaaaagt 144464  T
Q  101 atagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgaca 156  Q
    ||||||||| || ||||||||         ||||||||||||||||| |||||| ||||||||||    
T  144465 atagcaacgactgttttgaaaggattaaagggcattggatgcttattcttcaaagagcgttgaca 144529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 164966 - 165056
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    ||||||||||||||||||  |||||| |||||||||| ||||||| |||||||||||||| ||||||| ||||||||||| |||| |||||    
T  164966 aaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgtacgaccactacctccactactctgtttatgtct 165056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 933 - 731
Alignment:
Q  2 tcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcct--aaaattgcagaagactggaaaag 99  Q
    |||||||||||||||| ||||||  ||||  |||| |||||||  |||| ||||| | ||||| ||| ||||||   ||||||||||||||||   ||||    
T  933 tcaccagaagctgcagatcatcaaaagatc-aacctaaagcttcaaaagctgttt-caaggattcaagctcgccagaaaaattgcagaagactttgaaag 836  T
Q  100 tatagcaacggctattttgaaag-gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
    | || |||||||||||||||||  ||||||||||||||||  ||||  |||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  835 t-taacaacggctattttgaaaaagcattggatgcttattcctcaaggagcgttgacatagttcgtttgtacgaagtgtacaatcactatctgcactact 737  T
Q  199 cagttt 204  Q
    | ||||    
T  736 ctgttt 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 12297 - 12205
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| ||  || |||||||||| |||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12297 gcattggatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagattgtgtctctgct 12205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 5553 - 5717
Alignment:
Q  61 ggatacaaactcgcctaaa-attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcg 150  Q
    |||| |||||||| ||||| |||||||||||||||||||||| ||||||  |||||||||||||         |||| |||||||||| |||||| ||||    
T  5553 ggattcaaactcgtctaaagattgcagaagactggaaaagtaaagcaacaactattttgaaaggatttgaaggcatttgatgcttattcttcaaagagcg 5652  T
Q  151 ttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| ||||| ||| || ||||||||||||||||| ||||||||||  |||| ||||||||||    
T  5653 ttgacaaagtacatttatatgaagtgtacaaccactacctccactactatgtttttgtctctgct 5717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 13662 - 13567
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || || ||  || ||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13662 aaggcattggatgtttgttctttgaagagcgttgacatagtacaattgtacaaagtgtacaaccactatctccactactcagtttgtgtctctgct 13567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 5710 - 5805
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5710 aaggcattggatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaactactatctccactactcagtttgtgtctctgct 5805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 20991 - 21086
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||| |||||| ||||| |||  |||||  ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  20991 aaggcattggatgcttattcttcaaagagcgtcgaccaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgct 21086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 49423 - 49328
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49423 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactcagtttgtgtctctgct 49328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 32549 - 32481
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32549 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 32481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 365 - 455
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    ||||||||||||||||||  |||||| |||||||||| ||||||| |||||||||||||| ||||||| ||||||||||| |||| |||||    
T  365 aaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctgtacgaagtgtacgaccactacctccactactctgtttatgtct 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 22816 - 22672
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||||||||||||||||||  ||||||| |||||||||||||         ||||||||||||||| |||||| || ||||||| |||||  |||||     
T  22816 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcttcaaagagtgttgacaaagtacaattgtat 22717  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||| |||||||||||| ||||||||||| |||| ||||||||||    
T  22716 gaagcgtacaaccactacctccactactctgtttttgtctctgct 22672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 7795 - 7708
Alignment:
Q  119 aaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgt 206  Q
    |||||||||| ||| ||||| |||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  7795 aaaggcattgtatgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcagtttgt 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 27449 - 27544
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||  | |||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  27449 aaggcattggatgcttgctcttcaaagagcgttgacaaagtaccattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 27544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 18592 - 18734
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||         |||||||| ||| || ||  || |||||||||| |||||  || |||    
T  18592 attgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatacttgttctttgaagagcgttgacaaagtacaattttac 18691  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctctg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18692 gaagtgtacaaccactatctccactactcagtttgtgtctctg 18734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 18511 - 18539
Alignment:
Q  1 atcaccagaagctgcagttcatcaggaga 29  Q
    |||||||||||||||||||||||||||||    
T  18511 atcaccagaagctgcagttcatcaggaga 18539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 15642 - 15732
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtct 210  Q
    ||||||||||||||||||  |||||| ||| |||||| ||||||| |||||||||||||| ||||||||||||||||||| |||| |||||    
T  15642 aaggcattggatgcttatctttcaaagagcattgacaaagtacgtctgtacgaagtgtacgaccactatctccactactctgtttatgtct 15732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 212
Target Start/End: Complemental strand, 615 - 474
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||         |||||||||||| || ||  || ||||||||||||||||  ||||||    
T  615 attgcagaagactggaatagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtac 516  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||||||| |||||||| ||||||| ||||||||||    
T  515 gaagtgtacaaccattatctccattactcaggttgtgtctct 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 25946 - 26087
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaagg---------cattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    |||||| ||||||||||||||  ||||||| |||||||||||||         |||||||||||| || ||  || || |||||||||||||  |||||     
T  25946 attgcaaaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagggttgacatagtacaattgtat 26045  T
Q  171 gaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  26046 gaagtgtacaaccactatctcgactactcagtttgtgtctct 26087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 15885 - 15789
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgt-ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || ||||||||||||||||   ||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  15885 aaggcattggatgcttgttctttgaagagcgttgacatagtacaaattgtacgaagtgtacaaccaccatctctactactcagtttgtgtctctgct 15789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 10128 - 10220
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||||||||| || || ||| |||||||||| |||||  ||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  10128 aaggcattggatgcttgttttttaaagagcgttgacaaagtacaattgtacgaagtgtacgaccactacctccactactctgtttgtgtctct 10220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 14819 - 14884
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||| |||||  ||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  14819 agcgttgacaaagtacaattgtacgaagtgtacgaccactacctccactactctgtttgtgtctct 14884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 14739 - 14644
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| |  ||  || |||||||||| |||||  || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  14739 aaggcattggatgcttgtactttgaagagcgttgacaaagtacaattttacgaagtgtacaaccactacctccactactcagtttgtgtctctgct 14644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 1781 - 1686
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| |  ||  || |||||||||| |||||  ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1781 aaggcattggatgcttgtactttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactacttagtttgtgtctctgct 1686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 198
Target Start/End: Complemental strand, 103712 - 103585
Alignment:
Q  80 attgcagaagactggaaaagtatagcaacggctattttgaaa---------ggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtac 170  Q
    ||||||||||||||||| |||  |||||||||||||||||||         |||||||||||||| || |||||| |||||||||| |||||  ||||||    
T  103712 attgcagaagactggaagagtgaagcaacggctattttgaaatgatattaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtac 103613  T
Q  171 gaagtgtacaaccactatctccactact 198  Q
    ||||||| ||||||||| ||||||||||    
T  103612 gaagtgtgcaaccactacctccactact 103585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 38105 - 38189
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    ||||||||||||||||||  |||||| |||||||||| |||||||  ||||||||||||| ||||||| ||||||||||| ||||    
T  38105 aaggcattggatgcttatccttcaaagagcgttgacaaagtacgtccgtacgaagtgtacgaccactacctccactactctgttt 38189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 10047 - 9952
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| ||||||| || ||  || |||||||||| |||||  |||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  10047 aaggcattcgatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactactcagtttgtgtcgctgct 9952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 90075 - 90170
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || |||||| |||||||||| | |||   |||||||||||||||||| ||| ||||||||||| |||| ||||||||||    
T  90075 aaggcattggatgcttgttcttcaaagagcgttgacaaaatacaagtgtacgaagtgtacaacccctacctccactactctgtttttgtctctgct 90170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 89947 - 89990
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctt 44  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  89947 atcaccagaagctgcagttcatcaggagatgcaacttaaagctt 89990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 1817 - 1895
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactact 198  Q
    ||||||||||||||||||  |||||| |||||||||| ||||||| | |||||||||||| ||||||| ||||||||||    
T  1817 aaggcattggatgcttatccttcaaagagcgttgacaaagtacgtctatacgaagtgtacgaccactacctccactact 1895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 15181 - 15116
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  15181 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactacttagtttgtatctct 15116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 212442 - 212350
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||| || ||  || |||||||||| |||||  ||||||||||||||||||||||| ||||||||||| |||| ||||| ||||    
T  212442 gcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctatgct 212350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 246139 - 246215
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgcctaa 78  Q
    ||||||||||| ||||||||||||||||||| |||  |||||||  |||| || |||| ||||| |||||||||||||    
T  246139 atcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttg-tttcaaggattcaaactcgcctaa 246215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 6098 - 6003
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || ||  || |||||||||| |||||  |||||| |||||||||||||||| ||| |||||||  ||||||||||||||    
T  6098 aaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctctactactctatttgtgtctctgct 6003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 36795 - 36890
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || || ||| || ||||||| || ||  ||||||||||||||||||||||| ||| ||||||| |||| ||||||||||    
T  36795 aaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgtacgaagtgtacaaccactacctctactactctgtttttgtctctgct 36890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 42210 - 42115
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||| || || ||| || ||||||| || ||  ||||||||||||||||||||||| ||| ||||||| |||| ||||||||||    
T  42210 aaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgtacgaagtgtacaaccactacctctactactctgtttttgtctctgct 42115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 9994 - 9899
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||| ||||||| || ||  || |||||||||| |||||  |||||||||||||| |||||||| ||||||||||  |||||||||||||||    
T  9994 aaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactacctccactactatgtttgtgtctctgct 9899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11580 - 11447
Alignment:
Q  1 atcaccagaagctgcagttcatcaggagatgtaacccaaagctttgaaagatgttttctaggatacaaactcgccta-aaattgcagaagactggaaaag 99  Q
    |||||||||||||||||||||||| |||||| ||| ||| | ||| |||  |  |||| ||||  | |||||||||| ||||| ||||||||||||| ||    
T  11580 atcaccagaagctgcagttcatcaagagatggaactcaa-gttttcaaaatttgtttcaaggactctaactcgcctagaaattacagaagactggaagag 11482  T
Q  100 tatagcaacggctattttgaaaggcattggatgct 134  Q
    | | |||||||||| ||||||| ||||||||||||    
T  11481 tgtggcaacggctagtttgaaatgcattggatgct 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 1408 - 1324
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||| |||||||||| ||  || |||||||| | | |||  ||||||||||||||||||||||||||||||||||| ||||    
T  1408 aaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactctgttt 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 3 - 87
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||| |||||||||| ||  || |||||||| | | |||  ||||||||||||||||||||||||||||||||||| ||||    
T  3 aaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactctgttt 87  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 10057 - 9965
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||| | ||  || |||||| ||| |||||  |||||| |||||||||||||||| ||||||||||| |||| ||||||||||    
T  10057 gcattggatgcttactctttgaagagcgttcacaaagtacaattgtacaaagtgtacaaccactacctccactactctgtttttgtctctgct 9965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 1748 - 1656
Alignment:
Q  123 gcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||| | ||  || |||||||||| |||||  ||||| ||||||||||||||||| ||||||||||  |||| ||||||||||    
T  1748 gcattggatgcttactctttgaagagcgttgacaaagtacaattgtaggaagtgtacaaccactacctccactactttgtttttgtctctgct 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 3910 - 3999
Alignment:
Q  115 tttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    |||||||||| ||||||||| ||  | |||| |||||||||| ||||| | |||||||||||||| ||||||| ||||||| ||| ||||    
T  3910 tttgaaaggctttggatgctcatcctacaaagagcgttgacaaagtacatctgtacgaagtgtacgaccactacctccacttctctgttt 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 2042 - 2090
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccact 195  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||    
T  2042 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccact 2090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 5673 - 5634
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  5673 ttgtacgaagtgtacaaccactacctccactactcagttt 5634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 43966 - 44032
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgc 214  Q
    |||||||| | || || |||||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  43966 agcgttgaaaaaggacatttgtacgaattgtacaaccactatctccactactctgttt-tgtctctgc 44032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 37448 - 37398
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||| |||||||||||  ||| ||||||||||    
T  37448 ttgtacgaagtgtacaaccactacctccactactctatttttgtctctgct 37398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 135508 - 135458
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    ||||||||||||||||||||||| |||||||||||  ||| ||||||||||    
T  135508 ttgtacgaagtgtacaaccactacctccactactctatttttgtctctgct 135458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 159119 - 159051
Alignment:
Q  147 agcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||| || ||  ||||| |||||||| |||||||| ||| ||||||  |||||||||||||||    
T  159119 agcgttgacaaaggacaattgtatgaagtgtaaaaccactacctctactactttgtttgtgtctctgct 159051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 6043 - 6002
Alignment:
Q  174 gtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  6043 gtgtacaaccactatctccactactctgtttttgtctctgct 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 1586 - 1619
Alignment:
Q  165 ttgtacgaagtgtacaaccactatctccactact 198  Q
    ||||||||||||||||||||||||||||||||||    
T  1586 ttgtacgaagtgtacaaccactatctccactact 1619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 7858 - 7823
Alignment:
Q  177 tacaaccactatctccactactcagtttgtgtctct 212  Q
    |||||||||||||||| |||||||||||||||||||    
T  7858 tacaaccactatctcctctactcagtttgtgtctct 7823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 74648 - 74577
Alignment:
Q  144 aaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgct 215  Q
    |||||| |||||| |||||  ||||| ||||||||||||||||| ||| ||||||  |||||| ||||||||    
T  74648 aaaagcattgacaaagtacaattgtatgaagtgtacaaccactacctctactactttgtttgtatctctgct 74577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 4967 - 5040
Alignment:
Q  120 aaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcca 193  Q
    ||||||||||||| || || || | | |||||||||| |||||  ||||| ||||||||||||||||| |||||    
T  4967 aaggcattggatgtttgttctttatagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctcca 5040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 204
Target Start/End: Complemental strand, 7381 - 7292
Alignment:
Q  115 tttgaaaggcattggatgcttattattcaaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactcagttt 204  Q
    ||||||||||  |||||||| ||  | |||| || ||||||| ||||| | |||||||||||||| ||||||| ||||||| ||| ||||    
T  7381 tttgaaaggctgtggatgctcatcctacaaagagtgttgacaaagtacatatgtacgaagtgtacgaccactacctccacttctctgttt 7292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 6589 - 6621
Alignment:
Q  167 gtacgaagtgtacaaccactatctccactactc 199  Q
    ||||||||||||||||||||| |||||||||||    
T  6589 gtacgaagtgtacaaccactacctccactactc 6621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University