View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11120_low_12 (Length: 238)
Name: NF11120_low_12
Description: NF11120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11120_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 44144872 - 44145093
Alignment:
| Q |
1 |
gcaccaccattctcctcatctgaaacacgagaaacatagatggcggtataagaacgctctataggataaattccagaagttccttgagatggttgagagg |
100 |
Q |
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| T |
44144872 |
gcaccaccattctcctcatctgaaacacaagaaacatagatggcggtataagaacgctctataggataaattccagaagttccttgagatggttgagagg |
44144971 |
T |
|
| Q |
101 |
attactttcctcttatttgattgctagtagcctataaatcagctgtaatatacaaaaccaaatgtaccaagatctctgcagaactttgcaccataccctg |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
44144972 |
attactttcctcttatttgattgctaatagcctataaatcagctgtaatatacaaaaccaaatgtaccaagatctctgtagaactttgcaccataccctg |
44145071 |
T |
|
| Q |
201 |
aaagggatttttaacttttctt |
222 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
44145072 |
aaagggatttttaacttttctt |
44145093 |
T |
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