View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11120_low_5 (Length: 355)

Name: NF11120_low_5
Description: NF11120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11120_low_5
NF11120_low_5
[»] chr7 (41 HSPs)
chr7 (51-308)||(12870777-12871034)
chr7 (254-341)||(25956282-25956368)
chr7 (254-329)||(48125176-48125250)
chr7 (254-324)||(5579240-5579310)
chr7 (281-335)||(19612635-19612689)
chr7 (285-343)||(23637003-23637061)
chr7 (254-330)||(26459410-26459486)
chr7 (256-324)||(29385749-29385817)
chr7 (257-321)||(12877156-12877219)
chr7 (254-325)||(31835192-31835263)
chr7 (254-324)||(5273596-5273666)
chr7 (285-332)||(28646996-28647043)
chr7 (252-330)||(43215182-43215260)
chr7 (286-324)||(22696348-22696386)
chr7 (253-330)||(38374599-38374676)
chr7 (283-320)||(21050151-21050188)
chr7 (251-316)||(35328889-35328953)
chr7 (291-330)||(2882986-2883026)
chr7 (281-341)||(15905663-15905723)
chr7 (281-333)||(21574229-21574281)
chr7 (281-325)||(23330873-23330917)
chr7 (281-332)||(2751294-2751345)
chr7 (281-332)||(11997872-11997923)
chr7 (281-324)||(12211670-12211713)
chr7 (285-339)||(22760893-22760948)
chr7 (289-324)||(46279048-46279083)
chr7 (254-336)||(48039641-48039723)
chr7 (281-339)||(21217953-21218011)
chr7 (254-335)||(43590907-43590988)
chr7 (285-325)||(7801210-7801251)
chr7 (281-330)||(17212076-17212125)
chr7 (22-51)||(36176921-36176950)
chr7 (254-330)||(39631844-39631920)
chr7 (250-330)||(41487358-41487435)
chr7 (281-325)||(19421254-19421298)
chr7 (284-320)||(21035179-21035215)
chr7 (293-341)||(22264620-22264668)
chr7 (281-341)||(22703509-22703569)
chr7 (281-325)||(37693696-37693740)
chr7 (281-325)||(42913647-42913691)
chr7 (254-314)||(45559200-45559259)
[»] chr4 (47 HSPs)
chr4 (253-330)||(21344816-21344892)
chr4 (281-336)||(56409977-56410032)
chr4 (252-330)||(29195093-29195170)
chr4 (281-330)||(37980148-37980197)
chr4 (254-324)||(25434665-25434733)
chr4 (282-324)||(38206132-38206174)
chr4 (254-324)||(42281240-42281309)
chr4 (252-333)||(28929669-28929750)
chr4 (261-333)||(37455576-37455648)
chr4 (261-324)||(25414221-25414283)
chr4 (253-330)||(4088242-4088318)
chr4 (284-325)||(31141349-31141390)
chr4 (254-330)||(37109351-37109427)
chr4 (253-325)||(6606057-6606128)
chr4 (281-324)||(4686134-4686177)
chr4 (280-331)||(27908529-27908580)
chr4 (286-325)||(37492723-37492762)
chr4 (281-332)||(54127469-54127520)
chr4 (286-320)||(5998698-5998732)
chr4 (281-330)||(7949454-7949504)
chr4 (281-330)||(23377982-23378032)
chr4 (281-330)||(32992638-32992688)
chr4 (281-330)||(46295123-46295173)
chr4 (281-330)||(32475095-32475144)
chr4 (254-330)||(37274459-37274536)
chr4 (281-332)||(38869794-38869846)
chr4 (281-325)||(47183348-47183392)
chr4 (281-332)||(7392090-7392141)
chr4 (281-332)||(13017748-13017799)
chr4 (281-332)||(25852233-25852284)
chr4 (281-332)||(32986216-32986267)
chr4 (281-332)||(33696406-33696457)
chr4 (263-310)||(39030134-39030180)
chr4 (277-320)||(40307557-40307600)
chr4 (281-347)||(13771595-13771661)
chr4 (281-330)||(7093395-7093444)
chr4 (281-330)||(17701901-17701950)
chr4 (254-330)||(39509070-39509146)
chr4 (281-330)||(40058981-40059030)
chr4 (254-320)||(41621735-41621799)
chr4 (254-330)||(44865334-44865410)
chr4 (254-330)||(55427200-55427276)
chr4 (293-325)||(19220564-19220596)
chr4 (282-322)||(31870307-31870347)
chr4 (281-341)||(34835548-34835608)
chr4 (252-330)||(37720214-37720292)
chr4 (283-330)||(46329192-46329240)
[»] chr1 (43 HSPs)
chr1 (254-330)||(15581142-15581217)
chr1 (252-336)||(37046983-37047066)
chr1 (254-333)||(19480527-19480605)
chr1 (254-334)||(44417458-44417537)
chr1 (254-324)||(39964505-39964574)
chr1 (252-333)||(39012289-39012369)
chr1 (261-324)||(4824978-4825041)
chr1 (281-324)||(38939228-38939271)
chr1 (254-330)||(9165195-9165271)
chr1 (286-331)||(13857842-13857887)
chr1 (281-330)||(18928358-18928407)
chr1 (285-325)||(24217001-24217041)
chr1 (252-324)||(34228872-34228943)
chr1 (281-333)||(41470608-41470660)
chr1 (285-325)||(47360519-47360559)
chr1 (254-318)||(49101781-49101844)
chr1 (281-320)||(39714789-39714828)
chr1 (254-324)||(24857837-24857906)
chr1 (265-330)||(31605848-31605913)
chr1 (261-330)||(43445970-43446039)
chr1 (261-323)||(48400179-48400240)
chr1 (254-335)||(52116776-52116857)
chr1 (281-330)||(6127987-6128036)
chr1 (281-330)||(44486158-44486207)
chr1 (281-325)||(1138598-1138642)
chr1 (253-332)||(6122793-6122872)
chr1 (253-319)||(21273439-21273505)
chr1 (281-332)||(32729564-32729615)
chr1 (253-339)||(36371469-36371555)
chr1 (281-332)||(45859170-45859221)
chr1 (281-339)||(7197366-7197424)
chr1 (253-330)||(8177182-8177259)
chr1 (285-319)||(9926288-9926322)
chr1 (281-330)||(15786320-15786370)
chr1 (286-332)||(25237116-25237162)
chr1 (253-330)||(40257398-40257475)
chr1 (281-341)||(4566574-4566635)
chr1 (253-321)||(9570643-9570710)
chr1 (284-320)||(17297013-17297050)
chr1 (254-330)||(19528327-19528403)
chr1 (297-330)||(20907390-20907423)
chr1 (283-324)||(30043603-30043644)
chr1 (281-332)||(1486439-1486488)
[»] chr3 (37 HSPs)
chr3 (256-325)||(42799753-42799821)
chr3 (281-330)||(53863868-53863917)
chr3 (261-336)||(15034352-15034426)
chr3 (281-332)||(34844397-34844448)
chr3 (252-339)||(40268487-40268573)
chr3 (281-330)||(35623267-35623316)
chr3 (282-330)||(18316499-18316547)
chr3 (253-324)||(43303757-43303827)
chr3 (254-320)||(11092180-11092245)
chr3 (281-330)||(10682944-10682993)
chr3 (281-330)||(37944799-37944847)
chr3 (281-324)||(26158837-26158880)
chr3 (281-330)||(16900681-16900731)
chr3 (281-330)||(54990728-54990778)
chr3 (254-330)||(10445139-10445216)
chr3 (293-330)||(36660801-36660838)
chr3 (287-324)||(40777045-40777082)
chr3 (254-325)||(3054994-3055065)
chr3 (286-330)||(31714348-31714392)
chr3 (281-320)||(4252535-4252574)
chr3 (256-330)||(19716199-19716273)
chr3 (281-332)||(30257643-30257694)
chr3 (285-339)||(7485645-7485699)
chr3 (281-330)||(13164759-13164809)
chr3 (281-331)||(24478181-24478231)
chr3 (251-324)||(27093367-27093440)
chr3 (281-330)||(53412971-53413021)
chr3 (254-330)||(14186648-14186723)
chr3 (253-332)||(15566626-15566702)
chr3 (252-309)||(26871526-26871582)
chr3 (285-318)||(42430364-42430397)
chr3 (254-325)||(8170672-8170743)
chr3 (281-325)||(28834978-28835022)
chr3 (283-330)||(30311334-30311382)
chr3 (297-341)||(31766726-31766770)
chr3 (281-341)||(40133567-40133627)
chr3 (281-324)||(44069784-44069828)
[»] chr5 (29 HSPs)
chr5 (281-333)||(15485417-15485469)
chr5 (254-330)||(31669025-31669100)
chr5 (281-330)||(16172984-16173033)
chr5 (281-334)||(16247126-16247179)
chr5 (281-330)||(16457836-16457886)
chr5 (283-325)||(32340342-32340384)
chr5 (281-325)||(14656649-14656693)
chr5 (254-328)||(892476-892550)
chr5 (281-336)||(31206261-31206316)
chr5 (285-319)||(5943893-5943927)
chr5 (281-330)||(30883198-30883248)
chr5 (293-325)||(8780509-8780541)
chr5 (284-320)||(17648977-17649013)
chr5 (254-310)||(18989022-18989077)
chr5 (254-330)||(19373239-19373314)
chr5 (284-332)||(36895447-36895495)
chr5 (281-332)||(12398575-12398626)
chr5 (285-332)||(19145538-19145585)
chr5 (281-320)||(33025499-33025538)
chr5 (289-328)||(40023107-40023146)
chr5 (281-330)||(14285187-14285237)
chr5 (281-331)||(32059568-32059618)
chr5 (284-330)||(40330655-40330701)
chr5 (254-330)||(25627057-25627133)
chr5 (283-327)||(8851869-8851913)
chr5 (281-341)||(15971240-15971300)
chr5 (297-325)||(19883179-19883207)
chr5 (281-313)||(25439304-25439336)
chr5 (254-332)||(33709628-33709703)
[»] chr2 (41 HSPs)
chr2 (254-330)||(26482093-26482168)
chr2 (281-330)||(6099519-6099568)
chr2 (254-330)||(16525178-16525253)
chr2 (281-332)||(8192478-8192529)
chr2 (253-330)||(3697400-3697476)
chr2 (281-338)||(43963981-43964038)
chr2 (281-332)||(19605972-19606023)
chr2 (254-330)||(42327395-42327471)
chr2 (254-330)||(342395-342470)
chr2 (281-325)||(25384562-25384606)
chr2 (281-324)||(13747640-13747683)
chr2 (281-320)||(18825367-18825406)
chr2 (285-336)||(26176320-26176371)
chr2 (280-330)||(28194262-28194312)
chr2 (253-330)||(29503270-29503347)
chr2 (253-330)||(37480074-37480151)
chr2 (254-318)||(32106566-32106630)
chr2 (286-338)||(18708501-18708553)
chr2 (281-320)||(30359680-30359720)
chr2 (285-341)||(38341760-38341816)
chr2 (253-324)||(42602553-42602624)
chr2 (281-336)||(4618808-4618863)
chr2 (281-332)||(11941337-11941388)
chr2 (281-324)||(40591202-40591245)
chr2 (281-330)||(4262302-4262352)
chr2 (286-320)||(7250260-7250294)
chr2 (286-332)||(32526212-32526258)
chr2 (285-335)||(40997474-40997524)
chr2 (253-330)||(45672378-45672455)
chr2 (271-332)||(10582117-10582178)
chr2 (281-330)||(16711595-16711644)
chr2 (252-332)||(21195674-21195754)
chr2 (281-325)||(26276381-26276426)
chr2 (281-329)||(31439481-31439530)
chr2 (286-330)||(33839260-33839305)
chr2 (281-341)||(5394036-5394096)
chr2 (281-332)||(12086127-12086179)
chr2 (281-320)||(12517763-12517803)
chr2 (20-52)||(19208890-19208922)
chr2 (281-321)||(28105533-28105573)
chr2 (254-325)||(41908643-41908714)
[»] chr6 (36 HSPs)
chr6 (281-328)||(6384005-6384052)
chr6 (254-339)||(28028530-28028614)
chr6 (252-319)||(22683-22749)
chr6 (281-336)||(9208271-9208326)
chr6 (281-332)||(17149583-17149634)
chr6 (252-330)||(24507536-24507614)
chr6 (275-326)||(33499487-33499538)
chr6 (281-334)||(10338170-10338224)
chr6 (261-330)||(6691551-6691619)
chr6 (254-330)||(24334025-24334101)
chr6 (260-325)||(24762413-24762477)
chr6 (281-332)||(10377734-10377785)
chr6 (287-330)||(28741970-28742013)
chr6 (256-318)||(20864218-20864279)
chr6 (281-341)||(3779365-3779426)
chr6 (285-325)||(3433607-3433647)
chr6 (281-325)||(13564947-13564991)
chr6 (281-332)||(12591656-12591707)
chr6 (281-332)||(15360225-15360276)
chr6 (252-330)||(33549102-33549180)
chr6 (253-330)||(12188303-12188380)
chr6 (20-53)||(2970237-2970270)
chr6 (261-330)||(3869703-3869771)
chr6 (281-330)||(11007184-11007233)
chr6 (284-332)||(20213070-20213119)
chr6 (281-321)||(20863401-20863442)
chr6 (284-332)||(22107093-22107142)
chr6 (285-325)||(23910116-23910157)
chr6 (283-324)||(27869717-27869758)
chr6 (281-325)||(9843957-9844001)
chr6 (281-325)||(13569502-13569546)
chr6 (281-325)||(13574048-13574092)
chr6 (281-325)||(13576587-13576631)
chr6 (281-325)||(14932582-14932626)
chr6 (281-324)||(31622997-31623041)
chr6 (285-336)||(34444833-34444885)
[»] chr8 (38 HSPs)
chr8 (254-326)||(26688865-26688937)
chr8 (254-330)||(6530807-6530882)
chr8 (253-320)||(22268944-22269010)
chr8 (281-324)||(40136969-40137012)
chr8 (281-330)||(3524401-3524451)
chr8 (281-330)||(6536546-6536596)
chr8 (283-325)||(22779683-22779725)
chr8 (283-332)||(9126582-9126631)
chr8 (281-322)||(34639343-34639384)
chr8 (256-330)||(2203494-2203568)
chr8 (256-330)||(3624582-3624656)
chr8 (284-319)||(5438450-5438485)
chr8 (253-335)||(19703482-19703564)
chr8 (284-339)||(26168968-26169023)
chr8 (254-332)||(27750730-27750808)
chr8 (253-330)||(16852339-16852416)
chr8 (253-330)||(18897165-18897242)
chr8 (252-330)||(29206343-29206420)
chr8 (283-324)||(38463910-38463951)
chr8 (297-341)||(1372519-1372563)
chr8 (253-324)||(11793527-11793598)
chr8 (285-333)||(15974932-15974980)
chr8 (281-332)||(3734750-3734801)
chr8 (285-332)||(41070788-41070835)
chr8 (281-330)||(968388-968438)
chr8 (250-316)||(17727441-17727506)
chr8 (254-320)||(34778735-34778800)
chr8 (286-319)||(1458404-1458437)
chr8 (286-319)||(2428111-2428144)
chr8 (254-330)||(11819776-11819852)
chr8 (281-330)||(16317637-16317686)
chr8 (254-330)||(18540298-18540374)
chr8 (20-57)||(19957335-19957372)
chr8 (289-330)||(29855419-29855460)
chr8 (281-333)||(29858046-29858099)
chr8 (294-331)||(39317056-39317093)
chr8 (281-341)||(18532130-18532190)
chr8 (253-324)||(44780120-44780191)
[»] scaffold0337 (1 HSPs)
scaffold0337 (252-330)||(1751-1829)
[»] scaffold0065 (1 HSPs)
scaffold0065 (252-318)||(12187-12253)
[»] scaffold0002 (2 HSPs)
scaffold0002 (281-329)||(94972-95021)
scaffold0002 (281-330)||(142179-142229)
[»] scaffold0189 (1 HSPs)
scaffold0189 (290-330)||(17724-17764)
[»] scaffold0576 (1 HSPs)
scaffold0576 (281-332)||(5209-5260)
[»] scaffold0258 (1 HSPs)
scaffold0258 (281-330)||(15323-15373)
[»] scaffold0160 (1 HSPs)
scaffold0160 (281-339)||(29262-29320)
[»] scaffold0019 (1 HSPs)
scaffold0019 (279-332)||(161826-161879)
[»] scaffold0012 (1 HSPs)
scaffold0012 (255-320)||(240896-240960)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-52)||(108375-108407)


Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 51 - 308
Target Start/End: Original strand, 12870777 - 12871034
Alignment:
Q  51 tcgtccctaaatgtgtgagtcgttgttattacagtttctaaatgtattgaaaattcaaaatacattcttaaatacacatttcgctatttgaggaccaaac 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12870777 tcgtccctaaatgtgtgagtcgttgttattacagtttctaaatgtattgaaaattcaaaatacattcttaaatacacatttcgctatttgaggaccaaac 12870876  T
Q  151 taacttgtaaaatatatgttggaatatgtttttgtgattatgatagatagactatagtgactccgtttaatctttgttttattttaacttaattagatgt 250  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12870877 taacttgtaaaatatatgttggaagatgtttttgtgattatgatagatagactatagtgactccgtttaatctttgttttattttaacttaattagatgt 12870976  T
Q  251 gaaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct 308  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12870977 gaaaacccatttgggttggcctcatggtgtttggcctgggaccttggagtgtgctcct 12871034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 25956368 - 25956282
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    |||||||||||||||||||  |||| || |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  25956368 aacccatttgggttggcctagtggtatt-ggcttgggaccttggagtgtgctcctctcaaggtcttaggttcaattctccctggtgtc 25956282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 48125250 - 48125176
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaatt 329  Q
    |||||| ||||||||| ||  ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  48125250 aacccacttgggttggtctggtggtgtt-ggcttgggaccttggagtgtgctcctccgaaggtctcaggttcaatt 48125176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 5579310 - 5579240
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 324  Q
    |||||| |||||||| |||  ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  5579310 aacccacttgggttgacctggtggtgtt-ggcttgggaccttggagtgtgctcctcctcaaggtctcaggtt 5579240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 19612689 - 19612635
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccct 335  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||||| |||||    
T  19612689 ttggcttgggatcttgaagtgtgctcctctcaaggtctcatgttcaattacccct 19612635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 23637061 - 23637003
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtcca 343  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| || || ||||||    
T  23637061 cttgggaccttggagtgtgctcctctcaaggtcgcacgttcaattctccgtggtgtcca 23637003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 26459486 - 26459410
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || |||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  26459486 aacccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattc 26459410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 29385817 - 29385749
Alignment:
Q  256 cccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 324  Q
    |||| |||||||||||  |||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  29385817 cccacttgggttggccggatggtgtt-ggcttgggactttggagtgtgctcctcctcaaggtctcaggtt 29385749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 12877156 - 12877219
Alignment:
Q  257 ccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcag 321  Q
    |||||||||| |||||  |||| ||||||||||||||||||||| |||||||||||| |||||||    
T  12877156 ccatttgggtcggcctagtggt-tttggcttgggaccttggagtttgctcctctcaatgtctcag 12877219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 325
Target Start/End: Original strand, 31835192 - 31835263
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttc 325  Q
    |||||| ||||||||||||  ||||||| ||||||||  |||||||||||||||| |||||||||||||||||    
T  31835192 aacccacttgggttggcctggtggtgtt-ggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttc 31835263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 5273666 - 5273596
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 324  Q
    |||||| ||||||||||||  ||||||| ||||||||||||| |||||||||||| |||||||||| |||||    
T  5273666 aacccacttgggttggcctggtggtgtt-ggcttgggaccttagagtgtgctcctcctcaaggtcttaggtt 5273596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 28646996 - 28647043
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  28646996 cttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccc 28647043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 43215182 - 43215260
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||| ||||||||| ||  |||| || |||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  43215182 aaaacccacttgggttggtctagtggtatt-ggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattc 43215260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 22696348 - 22696386
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  22696348 ttgggatcttggagtgtgctcctctcaaggtctcaggtt 22696386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 38374676 - 38374599
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||| |||||||||| |  ||||||| ||||||||||||| |||||||||||| |||||||||| |||||| ||||    
T  38374676 aaacccacttgggttggcgtggtggtgtt-ggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattc 38374599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 21050188 - 21050151
Alignment:
Q  283 ggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    |||||| |||||||||||||||||||||||||||||||    
T  21050188 ggcttgagaccttggagtgtgctcctctcaaggtctca 21050151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 35328953 - 35328889
Alignment:
Q  251 gaaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggt 316  Q
    ||||||||| ||||||||||||  ||||| ||||||||| ||||| ||||||||| ||||||||||    
T  35328953 gaaaacccacttgggttggcctggtggtg-ttggcttggaaccttcgagtgtgcttctctcaaggt 35328889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 2882986 - 2883026
Alignment:
Q  291 accttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  2882986 accttggagtgtgctcctcctcaaggtctcaggttcaattc 2883026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 15905723 - 15905663
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    |||||||||||||| ||||||||||||||   ||||||||||||| |||| |||| |||||    
T  15905723 ttggcttgggacctgggagtgtgctcctccttaggtctcaggttcgattctccctaatgtc 15905663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 21574281 - 21574229
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcccc 333  Q
    |||| ||||||  |||||||||||||||||||||||| ||||||| |||||||    
T  21574281 ttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattcccc 21574229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 23330917 - 23330873
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||||  || |||||||||||||||||||||||||||||    
T  23330917 ttggcttgggattttagagtgtgctcctctcaaggtctcaggttc 23330873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 2751294 - 2751345
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||||    
T  2751294 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 2751345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 11997872 - 11997923
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| |||||||||  ||||||||||||| ||||||    
T  11997872 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccc 11997923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 324
Target Start/End: Complemental strand, 12211713 - 12211670
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    ||||||| ||| |||||||||||||||||||||| |||||||||    
T  12211713 ttggcttaggatcttggagtgtgctcctctcaagatctcaggtt 12211670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 339
Target Start/End: Original strand, 22760893 - 22760948
Alignment:
Q  285 cttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccctgatg 339  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||| ||| ||||    
T  22760893 cttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccccgatg 22760948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 46279048 - 46279083
Alignment:
Q  289 ggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    ||||||||||||||||||||||||||||||| ||||    
T  46279048 ggaccttggagtgtgctcctctcaaggtctccggtt 46279083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 48039723 - 48039641
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccctg 336  Q
    |||||| ||||||||||||  ||||||| |||||| || |||||||| ||||||| | ||||||||||||||| |||| |||||    
T  48039723 aacccacttgggttggcctggtggtgtt-ggcttgcgatcttggagtatgctccttcgcaaggtctcaggttctattctccctg 48039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 339
Target Start/End: Complemental strand, 21218011 - 21217953
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatg 339  Q
    ||||||||||| |||||||| ||||||||   ||||||||||||| |||||| ||||||    
T  21218011 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatg 21217953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 335
Target Start/End: Original strand, 43590907 - 43590988
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccct 335  Q
    |||||| ||||||||||||  |||| || |||||||||| | ||||||||||||| ||||| ||||||||||| |||| ||||    
T  43590907 aacccagttgggttggcctggtggtatt-ggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccct 43590988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 7801210 - 7801251
Alignment:
Q  285 cttgggaccttggagtgtgctcctc-tcaaggtctcaggttc 325  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  7801210 cttgggacctgggagtgtgctcctcttcaaggtctcaggttc 7801251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 17212076 - 17212125
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||| |||||||| ||||||||   ||||||||||||||||||    
T  17212076 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattc 17212125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 36176950 - 36176921
Alignment:
Q  22 gaataagtgaggtgtccggggtttgaacct 51  Q
    ||||||||||||||||||||||||||||||    
T  36176950 gaataagtgaggtgtccggggtttgaacct 36176921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 39631844 - 39631920
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || |||||||||||| |||||  ||||||| |||||||||||||||| ||||    
T  39631844 aacccacttgggttggcctagtggtatt-ggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattc 39631920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 41487358 - 41487435
Alignment:
Q  250 tgaaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||||| ||||||||||||  ||||  |||||||||||| | ||||||| |||  ||||||||||||||||| ||||    
T  41487358 tgaaaacccacttgggttggcctggtggt-attggcttgggacttgggagtgttctc--ctcaaggtctcaggttcgattc 41487435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 19421254 - 19421298
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||||||| |||||||| |||||||||  |||||||||||||    
T  19421254 ttggcttgggatcttggagtttgctcctctagaggtctcaggttc 19421298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 21035215 - 21035179
Alignment:
Q  284 gcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  21035215 gcttgagaccttggagtgtgctcctctcaaggactca 21035179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 22264668 - 22264620
Alignment:
Q  293 cttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    |||||||| |||||||||||||||||||| ||| |||||| ||| ||||    
T  22264668 cttggagtttgctcctctcaaggtctcagattcgattccctctggtgtc 22264620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 22703509 - 22703569
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    ||||||||||| |||||||| ||||||||   ||||||||||||| |||||| ||| ||||    
T  22703509 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtc 22703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 37693740 - 37693696
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||| |||||| |||||||||||||||||| || |||||||||||    
T  37693740 ttggtttgggatcttggagtgtgctcctcttaatgtctcaggttc 37693696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 42913691 - 42913647
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||||||| |||||||| |||||||||  |||||||||||||    
T  42913691 ttggcttgggatcttggagtttgctcctctagaggtctcaggttc 42913647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 45559200 - 45559259
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaag 314  Q
    |||||| ||||||||||||  |||| || ||||||| |||||||||||||||| |||||||    
T  45559200 aacccacttgggttggcctagtggtatt-ggcttggaaccttggagtgtgctcatctcaag 45559259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 21344816 - 21344892
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||| |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  21344816 aaacccacttgggttggcctgatgatgtt-ggcttgggaccttggagtgtgctcctctcaaggtctcatgttcaattc 21344892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 56409977 - 56410032
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctg 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  56409977 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctccctg 56410032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 29195093 - 29195170
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||| ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  29195093 aaaacccacttgggttggcctggtggtgtt-ggcttgggaccttggagtgtgctcctctcaaggtcgcaagttcgattc 29195170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 37980197 - 37980148
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37980197 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 37980148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 25434733 - 25434665
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||| ||||||||||||  ||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  25434733 aacccaattgggttggcctggtggtgt--ggcttgggaccttggagtgtgcttctctcaaggtctcaggtt 25434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 38206174 - 38206132
Alignment:
Q  282 tggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38206174 tggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 38206132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 42281309 - 42281240
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||| |||||||||||   ||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  42281309 aacccacttgggttggccaggtggtgtt-ggcttgggaccttgtagtgtgctcctctcaaggtctcaggtt 42281240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 28929669 - 28929750
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcccc 333  Q
    ||||||||||||||||| |||  | ||||| |  ||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  28929669 aaaacccatttgggttgacctagtagtgttagctttgggaccttgaagtgtgctcctttcaaggtctcaggttcgattcccc 28929750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 37455576 - 37455648
Alignment:
Q  261 ttgggttggcctcatggtgtttggcttgggacctt-ggagtgtgctcctctcaaggtctcaggttcaattcccc 333  Q
    ||||||||||||  ||||||| ||||||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  37455576 ttgggttggcctggtggtgtt-ggcttgggacctttggagtatgctcctctcaaggtctcaggttcgattcccc 37455648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 25414283 - 25414221
Alignment:
Q  261 ttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    ||||||||||||  ||||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  25414283 ttgggttggccttctggtgtt-ggcttgagaccttggagtgtgctcctctcaaagtctcaggtt 25414221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 4088242 - 4088318
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||||||||||| | ||||||| ||||||  ||||||||| ||| |||| |||||||||||||||| ||||    
T  4088242 aaacccatttgggttggccgcgtggtgtt-ggcttgaaaccttggagggtggtcctttcaaggtctcaggttcgattc 4088318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 31141390 - 31141349
Alignment:
Q  284 gcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  31141390 gcttgggaccttggagtgtgctcctctcaaggtctgaggttc 31141349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 37109427 - 37109351
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || |||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  37109427 aacccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattc 37109351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 6606057 - 6606128
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||| ||||||||| || |||||||| ||||||||||||||||| ||| |||| ||||| ||||||||||    
T  6606057 aaacccacttgggttggtctgatggtgtt-ggcttgggaccttggagagtgatcctttcaagatctcaggttc 6606128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 324
Target Start/End: Complemental strand, 4686177 - 4686134
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||||| |||||||||||||||||||||||| ||||||||||    
T  4686177 ttggcttgagaccttggagtgtgctcctctcaatgtctcaggtt 4686134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 27908529 - 27908580
Alignment:
Q  280 tttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcc 331  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||| |||||    
T  27908529 tttggctttggaccttggagtgtgttcctctcaaggtctcaagttccattcc 27908580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 325
Target Start/End: Complemental strand, 37492762 - 37492723
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  37492762 ttgggaccttggagtgtgatcctctcaaggtctcaggttc 37492723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 54127520 - 54127469
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||||||||||    
T  54127520 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccc 54127469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 5998732 - 5998698
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    |||||||||||||||||||||||||||||||||||    
T  5998732 ttgggaccttggagtgtgctcctctcaaggtctca 5998698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 7949504 - 7949454
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  7949504 ttggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattc 7949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 23377982 - 23378032
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  23377982 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattc 23378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 32992638 - 32992688
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||||    
T  32992638 ttggcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattc 32992688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 46295123 - 46295173
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| ||||    
T  46295123 ttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattc 46295173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 32475144 - 32475095
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||||| |||||||  |||||||||||||||||||||| ||||    
T  32475144 ttggcttgggaccctggagtgaactcctctcaaggtctcaggttcgattc 32475095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 37274536 - 37274459
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  | ||  |||||||||||||| ||||||||||||| |||||||||| |||||| ||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattc 37274459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 38869794 - 38869846
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||| ||||||    
T  38869794 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccc 38869846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 47183348 - 47183392
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||    
T  47183348 ttggcttgagaccttggagtgtgatcctctcaagatctcaggttc 47183392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 7392141 - 7392090
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||||    
T  7392141 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 7392090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 13017748 - 13017799
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||| | |||| |||||| ||||||||||||||||||||| ||||||    
T  13017748 ttggcttggaatcttgaagtgtgttcctctcaaggtctcaggttccattccc 13017799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 25852233 - 25852284
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||||    
T  25852233 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 25852284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 32986216 - 32986267
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||   ||||||||||||||||||||    
T  32986216 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccc 32986267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 33696457 - 33696406
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||   ||||||||||||||||||||    
T  33696457 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccc 33696406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 39030180 - 39030134
Alignment:
Q  263 gggttggcctcatggtgtttggcttgggaccttggagtgtgctcctct 310  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  39030180 gggttggcctggtggtgtt-ggcttgggaccttggagtgtgctcctct 39030134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 320
Target Start/End: Original strand, 40307557 - 40307600
Alignment:
Q  277 gtgtttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    |||||||| ||||||  |||||||||||||||||||||||||||    
T  40307557 gtgtttggtttgggattttggagtgtgctcctctcaaggtctca 40307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 13771661 - 13771595
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtccatctc 347  Q
    ||||||||||| |||| ||| ||||| |||||||||||||  ||| |||||| |||||||| |||||    
T  13771661 ttggcttgggatcttgaagtttgctcatctcaaggtctcaaattcgattccctctgatgtcaatctc 13771595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 7093395 - 7093444
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||| |||||||||||||||| ||||||| | |||||| ||||    
T  7093395 ttggcttgggatcttggagtgtgctcctttcaaggttttaggttcgattc 7093444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 17701901 - 17701950
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||| ||| ||||| |||||||||||||||||||||| ||| ||||    
T  17701901 ttggcttgagactttggaatgtgctcctctcaaggtctcagattcgattc 17701950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 39509070 - 39509146
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||| ||||||||  | ||||||||| || ||||||||||||| ||| ||||||||||||| ||||    
T  39509070 aacccacttgggttggtctcatggtaat-ggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattc 39509146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 40059030 - 40058981
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||| |||||||| |||||||||  ||||||||||||| ||||    
T  40059030 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattc 40058981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 41621799 - 41621735
Alignment:
Q  254 aacccatttggg-ttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    |||||||||||| ||||||| |||||   ||||||| || |||||||| |||||||||||||||||||    
T  41621799 aacccatttggggttggcctaatggt---tggcttgagatcttggagtttgctcctctcaaggtctca 41621735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 44865334 - 44865410
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| |||||||||||| |||||| |||||||| | |||||  |||||||||| |||||||||| |||||| ||||    
T  44865334 aacccacttgggttggcctgatggtg-ttggcttgagtccttgatgtgtgctcctcctcaaggtcttaggttcgattc 44865410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 55427276 - 55427200
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || |||||||||||| ||||| ||||||| ||| ||||||||||||| ||||    
T  55427276 aacccacttgggttggcctggtggtatt-ggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattc 55427200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 325
Target Start/End: Original strand, 19220564 - 19220596
Alignment:
Q  293 cttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||||||||||||||||| ||||||||    
T  19220564 cttggagtgtgctcctctcaaggtttcaggttc 19220596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 31870307 - 31870347
Alignment:
Q  282 tggcttgggaccttggagtgtgctcctctcaaggtctcagg 322  Q
    ||||||| ||||||||| ||||||||||||||||| |||||    
T  31870307 tggcttgagaccttggactgtgctcctctcaaggtttcagg 31870347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 34835548 - 34835608
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    ||||||||||| ||| |||| ||||||||| ||||||||| |||| |||||| ||| ||||    
T  34835548 ttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctggtgtc 34835608  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 37720292 - 37720214
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtt--tggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||| ||||||||||||   ||||||  ||||||||||||| ||||||||| ||| ||||||||| ||||||| ||||    
T  37720292 aaaacccacttgggttggcct---ggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattc 37720214  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 46329192 - 46329240
Alignment:
Q  283 ggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||| ||||||||||||| |||||||| |||||||| ||||    
T  46329192 ggcttgggacctgggagtgtgctcctcctcaaggtatcaggttcgattc 46329240  T

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Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 15581217 - 15581142
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  15581217 aacccacttgggttggcctggtggtgtt-ggcttgggaccttggagtgtgctcctctaaaggtctcaggttcaattc 15581142  T

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Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 37046983 - 37047066
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctg 336  Q
    |||||||| ||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  37046983 aaaacccacttgggttggtctggtggtgtt-ggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattccccctg 37047066  T

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Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 19480527 - 19480605
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcccc 333  Q
    ||||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||  ||| |||||||    
T  19480527 aacccatttgggttggccttatggtgtt-gacttgggatcttggagtgtgctcctctcaaggtctcacattcgattcccc 19480605  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 334
Target Start/End: Complemental strand, 44417537 - 44417458
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccc 334  Q
    ||||||||||| |||| || |||||| | ||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  44417537 aacccatttggtttggtctaatggtgct-ggcttgggaccttggagtgtgctgctctcaaggtctcaggtttgattccccc 44417458  T

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Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 39964505 - 39964574
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||| ||||||||||||||   |||||| |||||| |||||||||||||||||||||||||||||||||||    
T  39964505 aaccaatttgggttggcctagaggtgtt-ggcttgcgaccttggagtgtgctcctctcaaggtctcaggtt 39964574  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 39012289 - 39012369
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcccc 333  Q
    |||||||| || |||||||||  ||||||| |||||||||||||||||||||||| ||||||||||| |||||  |||||||    
T  39012289 aaaacccactttggttggcctagtggtgtt-ggcttgggaccttggagtgtgctcttctcaaggtcttaggtttgattcccc 39012369  T

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Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 4824978 - 4825041
Alignment:
Q  261 ttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggtt 324  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  4824978 ttgggttggtctgatggtgtt-ggcttgggaccttggagtgtgctcctcttcaaggtctcaggtt 4825041  T

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Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 324
Target Start/End: Original strand, 38939228 - 38939271
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  38939228 ttggcttgggaccttggagtgtgctcctctcaaggtctctggtt 38939271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 9165271 - 9165195
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || |||||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  9165271 aacccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattc 9165195  T

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Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 13857887 - 13857842
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcc 331  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||    
T  13857887 ttgggaccttggagagtgctcctatcaaggtctcaggttcaattcc 13857842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 18928358 - 18928407
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  18928358 ttggcttgagaccttaaagtgtgctcctctcaaggtctcaggttcaattc 18928407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 24217001 - 24217041
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  24217001 cttgggatcttggagtgtgctcctctcaaggtctcaggttc 24217041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 34228872 - 34228943
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||||| ||| ||||| ||  ||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  34228872 aaaacccacttgagttggtctggtggtgtt-ggcttgggacctcggagtgtgttcctctcaaggtctcaggtt 34228943  T

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Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 41470660 - 41470608
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcccc 333  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||| |||||||    
T  41470660 ttggcttgagaccttggagtatgctcctctcaaggtctcaagttcgattcccc 41470608  T

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Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 47360559 - 47360519
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  47360559 cttgggaccttggagtgtgctcctctcaagatctcaggttc 47360519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 49101844 - 49101781
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtct 318  Q
    |||||||||||||||||||  || |||| |||||  |||||||||||||||||||||||||||||    
T  49101844 aacccatttgggttggcctagtgttgtt-ggcttcagaccttggagtgtgctcctctcaaggtct 49101781  T

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Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 39714828 - 39714789
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  39714828 ttggcttgggatcttggagtgtgctcctctcaaggtctca 39714789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 24857906 - 24857837
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||| ||||||||||||  ||||||| |||| |||||||||||||| ||| |||||||| |||||||||    
T  24857906 aacccacttgggttggcctggtggtgtt-ggctagggaccttggagtgggcttctctcaagctctcaggtt 24857837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 31605913 - 31605848
Alignment:
Q  265 gttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||| |||| ||||    
T  31605913 gttggcctgatggtgtt-ggcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattc 31605848  T

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Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 43445970 - 43446039
Alignment:
Q  261 ttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||| | |||||||| |||||||| ||||||||||||||||| |||||||||||| |||| ||||    
T  43445970 ttgggttggcttgatggtgtt-ggcttgggtccttggagtgtgctcctcctcaaggtctcatgttcgattc 43446039  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 48400179 - 48400240
Alignment:
Q  261 ttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggt 323  Q
    |||||||||||| ||||| || ||||||||||||||||| |  ||||||||||||||||||||    
T  48400179 ttgggttggcctgatggtatt-ggcttgggaccttggagcgcactcctctcaaggtctcaggt 48400240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 52116857 - 52116776
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccct 335  Q
    |||||| ||||||||||||  |||| || |||||||||| | ||||||||||||| ||||| |||||||||||||||| ||||    
T  52116857 aacccagttgggttggcctggtggtatt-ggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccct 52116776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 6128036 - 6127987
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||| |||||||||||||| |||||||||||||||||||| |||| ||||    
T  6128036 ttggtttgggaccttggagcgtgctcctctcaaggtctcaagttcgattc 6127987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 44486207 - 44486158
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||| |||| ||||||||||||||||||||||||||||||  ||||||||    
T  44486207 ttggtttggaaccttggagtgtgctcctctcaaggtctcaaattcaattc 44486158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 1138598 - 1138642
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||| || |||||||||||||||||||||||||| ||||||    
T  1138598 ttggcttgagatcttggagtgtgctcctctcaaggtcttaggttc 1138642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 6122793 - 6122872
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattccc 332  Q
    |||||||||||||||| |||  |||| |  |||||||||| | |||||||||||||| |||||||||||||||| ||||||    
T  6122793 aaacccatttgggttgccctagtggtata-ggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccc 6122872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 21273439 - 21273505
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctc 319  Q
    ||||| ||||||| |||||| |||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  21273439 aaacctatttgggctggcctgatggtgtttg-cttgggaccttgaagtgtggtcctcttcaaggtctc 21273505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 32729564 - 32729615
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| ||| |||| |||||||||||| ||||||||||| ||||||    
T  32729564 ttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccc 32729615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 36371469 - 36371555
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccctgatg 339  Q
    ||||||| ||||||||||||  |||| || ||||||| |||| ||||||||||||| |||||||||| |||||| |||| | ||||||    
T  36371469 aaacccacttgggttggcctagtggtatt-ggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatg 36371555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 45859221 - 45859170
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| |||||||||  ||||||||||||| ||||||    
T  45859221 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccc 45859170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 339
Target Start/End: Complemental strand, 7197424 - 7197366
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatg 339  Q
    ||||||||||| |||||||| ||||||||   ||||||||||||| |||||| ||||||    
T  7197424 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatg 7197366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 8177259 - 8177182
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||||||| ||||||||  |||| || ||||||||| || ||||||||||||| |||||||| |||||||| ||||    
T  8177259 aaacccatttgagttggcctagtggtatt-ggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattc 8177182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Complemental strand, 9926322 - 9926288
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctc 319  Q
    ||||||| |||||||||||||||||||||||||||    
T  9926322 cttgggatcttggagtgtgctcctctcaaggtctc 9926288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 15786370 - 15786320
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||| ||||    
T  15786370 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattc 15786320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 25237162 - 25237116
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    |||||| |||||||| |||| ||||||||||||||||||| ||||||    
T  25237162 ttgggatcttggagtttgcttctctcaaggtctcaggttcgattccc 25237116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 40257398 - 40257475
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||||||  |||| || |||||| ||||| ||||||||||||| ||| |||||||| |||||||||    
T  40257398 aaacccacttgggttggcctggtggtatt-ggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattc 40257475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 4566574 - 4566635
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccctgatgtc 341  Q
    ||||||||| |||| ||||||||||||| |||| |||||||||||| |||| | ||||||||    
T  4566574 ttggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctgatgtc 4566635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 9570643 - 9570710
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcag 321  Q
    ||||||| |||||||||| | |||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  9570643 aaacccacttgggttggc-tgatggtgtt-ggcttgagaccttggagtgtgctcttcctcaaggtctcag 9570710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 17297013 - 17297050
Alignment:
Q  284 gcttgggaccttggagtgtgctcct-ctcaaggtctca 320  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  17297013 gcttgggaccttggagtgtgctcctcctcaaggtctca 17297050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 19528403 - 19528327
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || ||||||||| ||  ||||||||||||| |||||||||||||||| ||||    
T  19528403 aacccacttgggttggcctggtggtatt-ggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattc 19528327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 20907423 - 20907390
Alignment:
Q  297 gagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||||||||||||||||||| |||||||||    
T  20907423 gagtgtgctcctctcaaggtctcacgttcaattc 20907390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 30043644 - 30043603
Alignment:
Q  283 ggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  30043644 ggcttgagaccttggagtgtgcttctatcaaggtctcaggtt 30043603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 1486439 - 1486488
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||||  || ||||||||||||||||||| ||||||    
T  1486439 ttggcttgggatcttggagtg--ctactctcaaggtctcaggttcgattccc 1486488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 42799821 - 42799753
Alignment:
Q  256 cccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42799821 cccacttgggttggcctggtggtgtt-ggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 42799753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 53863917 - 53863868
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  53863917 ttggcttgggaccttggagtgtgctcctctcaaggtcttaggttcaattc 53863868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 15034352 - 15034426
Alignment:
Q  261 ttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctg 336  Q
    ||||||||||||  ||||||| | ||||||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  15034352 ttgggttggcctggtggtgtt-gccttgggaccttggagggtgatcctctcaaggtctcaggttcaattctccctg 15034426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 34844397 - 34844448
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  34844397 ttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgattccc 34844448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 339
Target Start/End: Original strand, 40268487 - 40268573
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatg 339  Q
    |||||||| ||||||| ||||  ||||||| ||||||||||||||||||| |||||||| |||||||||||||| |||| ||| ||||    
T  40268487 aaaacccacttgggtttgcctggtggtgtt-ggcttgggaccttggagtgggctcctcttaaggtctcaggttcgattctccccgatg 40268573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 35623316 - 35623267
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  35623316 ttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcgattc 35623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 18316547 - 18316499
Alignment:
Q  282 tggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  18316547 tggcttgggaccttggagtgtgctcctctcaaggtcttaggttcgattc 18316499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 43303757 - 43303827
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    ||||||||||||||||||||  ||||| | |||||| |||||||||| ||||||||||| ||||||||||||    
T  43303757 aaacccatttgggttggcctggtggtgat-ggcttgagaccttggagcgtgctcctctccaggtctcaggtt 43303827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 11092245 - 11092180
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    |||||| ||||||||||||  ||||||| |||||||||||||| |||||||| ||||||||||||||    
T  11092245 aacccacttgggttggcctagtggtgtt-ggcttgggaccttgtagtgtgctactctcaaggtctca 11092180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 10682993 - 10682944
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  10682993 ttggcttgagaccttggagtgtgcttctctcaaagtctcaggttcaattc 10682944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 37944847 - 37944799
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  37944847 ttggcctgggaccttggagtgtgctcctctcaaggt-tcaggttcaattc 37944799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 324
Target Start/End: Original strand, 26158837 - 26158880
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  26158837 ttggcttgagatcttggagtgtgctcctctcaaggtctcaggtt 26158880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 16900731 - 16900681
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  16900731 ttggcttgggaccttggagtgtgctcctcgtcaaggtctcatgttcgattc 16900681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 54990728 - 54990778
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  54990728 ttggcttgggaccttggagcgtgctcctcctcaaggtctcaggttcgattc 54990778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 10445216 - 10445139
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||   |||||||||||||| ||||||||||||| ||| ||||||||||||| ||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattc 10445139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 36660801 - 36660838
Alignment:
Q  293 cttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||| |||||||||||||||||||||||||||||    
T  36660801 cttggagtttgctcctctcaaggtctcaggttcaattc 36660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 40777045 - 40777082
Alignment:
Q  287 tgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||| |||||||||||||||||||||||||||||||    
T  40777045 tgggacattggagtgtgctcctctcaaggtctcaggtt 40777082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 325
Target Start/End: Original strand, 3054994 - 3055065
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttc 325  Q
    |||||| ||||||||||||  ||||||| ||||||||||||||||| ||||| || |||||| ||||||||||    
T  3054994 aacccacttgggttggcctggtggtgtt-ggcttgggaccttggagcgtgcttctcctcaagatctcaggttc 3055065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 31714348 - 31714392
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||    
T  31714348 ttgggaccttgaagtgtgctcctctcaaggtctcaagttcgattc 31714392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 4252574 - 4252535
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  4252574 ttggcttgagatcttggagtgtgctcctctcaaggtctca 4252535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 19716199 - 19716273
Alignment:
Q  256 cccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||||||||| | |  ||||||| ||||||||||| |||||||||||||| ||||||||||| ||||| ||||    
T  19716199 cccatttgggttgacatggtggtgtt-ggcttgggaccatggagtgtgctcctcctcaaggtctctggttcgattc 19716273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 30257643 - 30257694
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||||    
T  30257643 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 30257694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 7485699 - 7485645
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatg 339  Q
    ||||||| |||||||| ||||||||  |||||||||||||| |||||| ||||||    
T  7485699 cttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatg 7485645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 13164809 - 13164759
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||||||||||| || |||||||||| |||||||||||    
T  13164809 ttggctttggaccttggagtgtgctactcctcaaggtcttaggttcaattc 13164759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 24478181 - 24478231
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcc 331  Q
    ||||||||| || ||| ||||| |||||||||||||||| |||||||||||    
T  24478181 ttggcttggtactttgaagtgttctcctctcaaggtctcgggttcaattcc 24478231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 27093440 - 27093367
Alignment:
Q  251 gaaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 324  Q
    ||||||||| ||||||||||||  ||||  ||||||||| || | ||||||||||||| ||||||||||||||||    
T  27093440 gaaaacccacttgggttggcctagtggt-attggcttggaacttgggagtgtgctcctcctcaaggtctcaggtt 27093367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 53412971 - 53413021
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    ||||||||  |||| |||||||||||||| |||||||||||||||||||||    
T  53412971 ttggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattc 53413021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 14186648 - 14186723
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || | |||||||||| |||||||||||||| |||||||||||||||| ||||    
T  14186648 aacccacttgggttggcctagtggtatt-gtcttgggacct-ggagtgtgctcctcctcaaggtctcaggttcgattc 14186723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 15566702 - 15566626
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||||||||||||  ||||   ||||||| || |||||||| ||||||||   ||||||||||||| ||||||    
T  15566702 aaacccatttgggttggcctagtggt---tggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccc 15566626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 26871582 - 26871526
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc 309  Q
    |||||||| ||||||||||||  ||||||| |||||||||||||||||| | ||||||    
T  26871582 aaaacccacttgggttggcctggtggtgtt-ggcttgggaccttggagttttctcctc 26871526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 42430364 - 42430397
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtct 318  Q
    ||||||| ||||||||||||||||||||||||||    
T  42430364 cttgggatcttggagtgtgctcctctcaaggtct 42430397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 325
Target Start/End: Original strand, 8170672 - 8170743
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttc 325  Q
    |||||||||||||||||||  ||||  ||||||||  || | ||||||||||||| |||||||||||||||||    
T  8170672 aacccatttgggttggcctagtggt-attggcttgaaacttgggagtgtgctcctactcaaggtctcaggttc 8170743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 28835022 - 28834978
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||| |||||||||||||  |||||||||||||||| ||||    
T  28835022 ttggcttgtgaccttggagtgtcttcctctcaaggtctcaagttc 28834978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 30311334 - 30311382
Alignment:
Q  283 ggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||||| || ||||||||||||| ||||||||||||||||| ||||    
T  30311334 ggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattc 30311382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 31766726 - 31766770
Alignment:
Q  297 gagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    |||||||||||||| |||||||||||||| ||| || ||||||||    
T  31766726 gagtgtgctcctcttaaggtctcaggttcgatttcctctgatgtc 31766770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 40133627 - 40133567
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    |||||||||||  ||||||| ||||||||  |||||||||||||| |||||| ||| ||||    
T  40133627 ttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtc 40133567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 324
Target Start/End: Original strand, 44069784 - 44069828
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 324  Q
    |||||||| || |||||||||||||||| ||||||||||||||||    
T  44069784 ttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtt 44069828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 15485469 - 15485417
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcccc 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15485469 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattcccc 15485417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 31669100 - 31669025
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||| || |||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  31669100 aacccacttgggttggtctgatggtgtt-ggcttgggaccttggagtctgctcctctcaaggtcttaggttcgattc 31669025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 16173033 - 16172984
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  16173033 ttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgattc 16172984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 281 - 334
Target Start/End: Complemental strand, 16247179 - 16247126
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccc 334  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  16247179 ttggcttgggaccttgcagtgtgctcctatcaaggtctcaggttcaatcccccc 16247126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 16457836 - 16457886
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  16457836 ttggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattc 16457886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 325
Target Start/End: Complemental strand, 32340384 - 32340342
Alignment:
Q  283 ggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  32340384 ggcttgggaccttggagtgtgctcctctcaaggtcttaggttc 32340342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 14656693 - 14656649
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||    
T  14656693 ttggcttgagaccttggagtttgctcctctcaaggtctcaggttc 14656649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 892550 - 892476
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaat 328  Q
    |||||||||||||||||||  |||| || ||||||||||||  |||||| |||||| |||||||||||||||||||    
T  892550 aacccatttgggttggcctagtggtatt-ggcttgggacctcagagtgtactcctcctcaaggtctcaggttcaat 892476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 31206261 - 31206316
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctg 336  Q
    |||||||||||| | |||||||||||| ||||||||||||||||  ||||||||||    
T  31206261 ttggcttgggacttcggagtgtgctccgctcaaggtctcaggttttattccccctg 31206316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 319
Target Start/End: Complemental strand, 5943927 - 5943893
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctc 319  Q
    |||||||||||||||||||||||||||||||||||    
T  5943927 cttgggaccttggagtgtgctcctctcaaggtctc 5943893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 30883248 - 30883198
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  30883248 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattc 30883198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 325
Target Start/End: Original strand, 8780509 - 8780541
Alignment:
Q  293 cttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||||||||||||||||||||||||||    
T  8780509 cttggagtgtgctcctctcaaggtctcaggttc 8780541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 17648977 - 17649013
Alignment:
Q  284 gcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    |||||||||||||||||||| ||||||||||||||||    
T  17648977 gcttgggaccttggagtgtgatcctctcaaggtctca 17649013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 18989077 - 18989022
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctct 310  Q
    |||||| ||||||| || | |||||||| ||||||||||||||||||||||||||||    
T  18989077 aacccacttgggtttgcatgatggtgtt-ggcttgggaccttggagtgtgctcctct 18989022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 19373239 - 19373314
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||| ||| ||||||||  ||||||| |||||| |||||||||||||||| |||||||||| | |||||| ||||    
T  19373239 aacccacttgagttggcctggtggtgtt-ggcttgagaccttggagtgtgctactctcaaggttttaggttcgattc 19373314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 36895447 - 36895495
Alignment:
Q  284 gcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    |||||||| |||||||||||||||||||||||| ||| |||| ||||||    
T  36895447 gcttgggatcttggagtgtgctcctctcaaggtttcatgttcgattccc 36895495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 12398626 - 12398575
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||||    
T  12398626 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 12398575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 19145585 - 19145538
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||| |||||||| |||||||||||||||||| ||||| ||||||    
T  19145585 cttgggatcttggagtatgctcctctcaaggtctccggttcgattccc 19145538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 33025499 - 33025538
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  33025499 ttggcttgggatcttggagtgtgctcctctcaagatctca 33025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 40023146 - 40023107
Alignment:
Q  289 ggaccttggagtgtgctcctctcaaggtctcaggttcaat 328  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  40023146 ggaccttggagtgtgctactctcaaggcctcaggttcaat 40023107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 14285187 - 14285237
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||| ||||    
T  14285187 ttggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattc 14285237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 32059618 - 32059568
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcc 331  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| |||||    
T  32059618 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcc 32059568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 40330655 - 40330701
Alignment:
Q  284 gcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||| || |||||||| ||||||||||||||||||| |||||||||    
T  40330655 gcttgagatcttggagtttgctcctctcaaggtctcaagttcaattc 40330701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 25627057 - 25627133
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || ||||||| || | |||||||||||||| |||||||||||||||| ||||    
T  25627057 aacccacttgggttggcctagtggtatt-ggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattc 25627133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 8851869 - 8851913
Alignment:
Q  283 ggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaa 327  Q
    |||||| ||||| |||||||| ||||||| |||||||||||||||    
T  8851869 ggcttgagacctaggagtgtgttcctctctaggtctcaggttcaa 8851913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 15971300 - 15971240
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    ||||||||||| |||||||| ||||||||   ||||||||||||| ||| || ||||||||    
T  15971300 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctgatgtc 15971240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 325
Target Start/End: Complemental strand, 19883207 - 19883179
Alignment:
Q  297 gagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||||||||||||||||||||||    
T  19883207 gagtgtgctcctctcaaggtctcaggttc 19883179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 313
Target Start/End: Complemental strand, 25439336 - 25439304
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaa 313  Q
    ||||||||| |||||||||||||||||||||||    
T  25439336 ttggcttggaaccttggagtgtgctcctctcaa 25439304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 33709703 - 33709628
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    |||||||||||||||||||  ||||   |||||||||| |||||||| ||||||||   |||||||| |||| ||||||    
T  33709703 aacccatttgggttggcctagtggt---tggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccc 33709628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 26482093 - 26482168
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||| || ||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  26482093 aacccacttaggttggcctgatggtgtt-ggcttgggacctaggagtgtgctcctctcaaggtctcaggttcgattc 26482168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 6099568 - 6099519
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6099568 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 6099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 16525178 - 16525253
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||| |||||||||||| |||||||| |||||||||| |||||||||||  ||||||||||||||||||| ||||    
T  16525178 aacccacttgggttggcctgatggtgtt-ggcttgggacgttggagtgtgcgactctcaaggtctcaggttcgattc 16525253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 8192529 - 8192478
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  8192529 ttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccc 8192478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 3697476 - 3697400
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||| || ||||| || ||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  3697476 aaacccacttgggttggtctgatggtatt-ggcttgggaccttggagagtgctcctctcaaggtctctggttcgattc 3697400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 43964038 - 43963981
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgat 338  Q
    |||| ||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  43964038 ttggtttgggaccttggagtgtgctcctctcaaggtctcatgtttgattccccctgat 43963981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 19606023 - 19605972
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  19606023 ttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccc 19605972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 42327471 - 42327395
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || |||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  42327471 aacccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattc 42327395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 342395 - 342470
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  ||||||| |||||| ||||||||||||| ||| || |||||||||| |||||||||    
T  342395 aacccacttgggttggcctggtggtgtt-ggcttgtgaccttggagtgtactcatcgcaaggtctcaagttcaattc 342470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 25384562 - 25384606
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  25384562 ttggcttgggaccttggagtgtgctcctctcagggtctcgggttc 25384606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 324
Target Start/End: Complemental strand, 13747683 - 13747640
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||||||||||||||||| |||||||| ||||||||||||||    
T  13747683 ttggcttgggaccttggagtatgctcctcccaaggtctcaggtt 13747640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 18825367 - 18825406
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  18825367 ttggcttgggacctaggagtgtgctcctctcaaggtctca 18825406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 336
Target Start/End: Complemental strand, 26176371 - 26176320
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctg 336  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||| |||||    
T  26176371 cttgggaccttggggtgtgctcctctcaaggtctcagattcgattctccctg 26176320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 28194312 - 28194262
Alignment:
Q  280 tttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||||||| |||||||||||||||||| ||||||| |||||| ||||    
T  28194312 tttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattc 28194262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 29503270 - 29503347
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||||||  |||| || || ||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  29503270 aaacccacttgggttggcctagtggtatt-ggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattc 29503347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 37480074 - 37480151
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||||||  |||| || ||||||||||||  |||||||||||| ||||||||||||||||| ||||    
T  37480074 aaacccacttgggttggcctggtggtatt-ggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattc 37480151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 32106566 - 32106630
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgct-cctctcaaggtct 318  Q
    |||||| ||||||||||||  ||||||| | ||||||||||||||||||||| |||||||||||||    
T  32106566 aacccacttgggttggcctggtggtgtt-gacttgggaccttggagtgtgctccctctcaaggtct 32106630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 338
Target Start/End: Original strand, 18708501 - 18708553
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgat 338  Q
    |||||| ||||||||||| ||||||||||||||||||||| | |||| |||||    
T  18708501 ttgggatcttggagtgtgttcctctcaaggtctcaggttcgactccctctgat 18708553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 30359680 - 30359720
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctca 320  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  30359680 ttggcttgggaccttggagtgtgctcctcctcaaggtctca 30359720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 341
Target Start/End: Original strand, 38341760 - 38341816
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    ||||||| |||| ||| |||||||||||||||||||| ||| |||||||||| ||||    
T  38341760 cttgggatcttgaagtttgctcctctcaaggtctcagattcgattccccctgttgtc 38341816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 42602553 - 42602624
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcc-tctcaaggtctcaggtt 324  Q
    ||||||| ||||||||||||  |||| || |||||||||||| |||||||||||| ||||||||||| |||||    
T  42602553 aaacccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtgctccttctcaaggtcttaggtt 42602624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 4618863 - 4618808
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctg 336  Q
    ||||||||| | |||||||| ||||||||||||||| |||||||| ||| ||||||    
T  4618863 ttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcccctg 4618808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 11941388 - 11941337
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||   ||||||||||||||||||||    
T  11941388 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccc 11941337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 324
Target Start/End: Original strand, 40591202 - 40591245
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||||| || ||||||||||||||||||||| ||||||||||    
T  40591202 ttggcttgagatcttggagtgtgctcctctcaaagtctcaggtt 40591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 4262352 - 4262302
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||| ||||    
T  4262352 ttggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattc 4262302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 7250260 - 7250294
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    ||||||||||||||||||||||||||||| |||||    
T  7250260 ttgggaccttggagtgtgctcctctcaagatctca 7250294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 32526258 - 32526212
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    |||||| |||| ||| |||||||||||||||||||||||| ||||||    
T  32526258 ttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccc 32526212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 40997524 - 40997474
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccct 335  Q
    ||||||| |||||||| ||||||||  ||||||||| ||||||||||||||    
T  40997524 cttgggatcttggagtttgctcctccaaaggtctcatgttcaattccccct 40997474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 45672455 - 45672378
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||||||  |||| |||| |||| ||||||||||| || ||||| || ||||||||||||||||||    
T  45672455 aaacccacttgggttggccttgtggt-tttgccttgagaccttggagtatgttcctcctctaggtctcaggttcaattc 45672378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 10582178 - 10582117
Alignment:
Q  271 ctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||| ||| ||||||||||| |||||||| ||||||||   ||||||||||||| ||||||    
T  10582178 ctcatagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 10582117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 16711595 - 16711644
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||| |||||| || |||||||||||||||||| ||||||| ||||    
T  16711595 ttggcttgtgaccttagaatgtgctcctctcaaggtcgcaggttcgattc 16711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 332
Target Start/End: Complemental strand, 21195754 - 21195674
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattccc 332  Q
    ||||||||||||||||| |||  |||| |  ||||||| || | |||||||||||||| |||||||||||||||| ||||||    
T  21195754 aaaacccatttgggttgccctagtggtata-ggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccc 21195674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 26276381 - 26276426
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttc 325  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||    
T  26276381 ttggcttggggccttgtagtgtgctcctcctcaaggtctcaggttc 26276426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 31439530 - 31439481
Alignment:
Q  281 ttggcttgggaccttg-gagtgtgctcctctcaaggtctcaggttcaatt 329  Q
    ||||||| ||| |||| ||||||||||||||||| |||||||||||||||    
T  31439530 ttggcttcggatcttgagagtgtgctcctctcaaagtctcaggttcaatt 31439481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 33839305 - 33839260
Alignment:
Q  286 ttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||    
T  33839305 ttgggacatgggagtgtgctcctcctcaaggtctcaggttcaattc 33839260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 5394036 - 5394096
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    |||||||| || |||||||| ||||||||  |||||||||||||| |||||| ||| ||||    
T  5394036 ttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtc 5394096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 12086179 - 12086127
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccc 332  Q
    |||||||||||||| | ||||||||||| ||||||||||| ||||| ||||||    
T  12086179 ttggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccc 12086127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 12517803 - 12517763
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctca 320  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  12517803 ttggcttgggaccttggagtttgctcctcctcaaggtctca 12517763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 19208890 - 19208922
Alignment:
Q  20 gtgaataagtgaggtgtccggggtttgaacctc 52  Q
    ||||||||||||||||||||| |||||||||||    
T  19208890 gtgaataagtgaggtgtccggagtttgaacctc 19208922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 28105533 - 28105573
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcag 321  Q
    |||||||||||||||||| ||| ||| ||||||||||||||    
T  28105533 ttggcttgggaccttggattgtactcttctcaaggtctcag 28105573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 325
Target Start/End: Complemental strand, 41908714 - 41908643
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttc 325  Q
    |||||| ||||||||||||  ||||||  || ||| ||||||||||||||||||| |||||||||||| ||||    
T  41908714 aacccacttgggttggcctggtggtgtc-ggtttgagaccttggagtgtgctcctcctcaaggtctcaagttc 41908643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 6384052 - 6384005
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaat 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6384052 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaat 6384005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 254 - 339
Target Start/End: Original strand, 28028530 - 28028614
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatg 339  Q
    |||||| ||||||||||||  ||||||| | ||||||||||| ||||| |||||||||||||||||| |||| |||| ||||||||    
T  28028530 aacccacttgggttggcctggtggtgtt-gacttgggacctttgagtgagctcctctcaaggtctcatgttcgattctccctgatg 28028614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 22749 - 22683
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctc 319  Q
    |||||||| ||||||||| ||  |||| ||||||||||||||||||||||||||| ||||||||||||    
T  22749 aaaacccacttgggttgggctagtggt-tttggcttgggaccttggagtgtgctcttctcaaggtctc 22683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 9208271 - 9208326
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctg 336  Q
    |||| |||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  9208271 ttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctg 9208326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 17149634 - 17149583
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    |||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  17149634 ttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccc 17149583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 24507614 - 24507536
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||| |||||||||||||||  ||||||| |||||||||||||||||| ||||||| ||||||||||  ||||||||||    
T  24507614 aaaactcatttgggttggcctagtggtgtt-ggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattc 24507536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 33499487 - 33499538
Alignment:
Q  275 tggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttca 326  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  33499487 tggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttca 33499538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 334
Target Start/End: Complemental strand, 10338224 - 10338170
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccc 334  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  10338224 ttggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattccccc 10338170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 6691619 - 6691551
Alignment:
Q  261 ttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||||  ||||||| | |||  |||||||||||||||||||||||||||||||||||| ||||    
T  6691619 ttgggttggcctggtggtgtt-gactttagaccttggagtgtgctcctctcaaggtctcaggttcgattc 6691551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 24334101 - 24334025
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    |||||| |||||||||||  |||||||| |||||||||| ||| ||| |||||||| |||||||||||||||||||||    
T  24334101 aacccacttgggttggccggatggtgtt-ggcttgggacattgcagtatgctcctcctcaaggtctcaggttcaattc 24334025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 325
Target Start/End: Complemental strand, 24762477 - 24762413
Alignment:
Q  260 tttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||| || |||||||| ||||||||||||||| |||||||||||| ||||||| ||||||    
T  24762477 tttgggttggtctaatggtgtt-ggcttgggaccttggtgtgtgctcctcttaaggtcttaggttc 24762413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 10377734 - 10377785
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    |||||||| || |||||||||||||| | |||||||||||||||||||||||    
T  10377734 ttggcttgagatcttggagtgtgctcatgtcaaggtctcaggttcaattccc 10377785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 28742013 - 28741970
Alignment:
Q  287 tgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  28742013 tgggatcttggagtgtgctcctctcaaggtctcaggttcgattc 28741970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 20864279 - 20864218
Alignment:
Q  256 cccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtct 318  Q
    |||||||||||| ||||  ||||||| ||||| ||||||||||||||||||||||||| ||||    
T  20864279 cccatttgggttagcctggtggtgtt-ggcttaggaccttggagtgtgctcctctcaatgtct 20864218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 3779365 - 3779426
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccctgatgtc 341  Q
    |||||||| ||| | ||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  3779365 ttggcttgagacttgggagtgtgctccttctcaaggtctcagattcaattccctctgatgtc 3779426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 3433647 - 3433607
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  3433647 cttgagaccttggagtttgctcctctcaaggtctcaggttc 3433607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 13564947 - 13564991
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||||| | ||||||||||| |||||||||||||||||||||    
T  13564947 ttggcttggaatcttggagtgtgttcctctcaaggtctcaggttc 13564991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Original strand, 12591656 - 12591707
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||||    
T  12591656 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 12591707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 15360276 - 15360225
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||||    
T  15360276 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 15360225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 33549102 - 33549180
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||| ||||||||| ||  |||| || |||||||||||| ||||||||||||| ||| ||||||||||||| ||||    
T  33549102 aaaacccacttgggttggtctggtggtatt-ggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattc 33549180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 12188380 - 12188303
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||||||  |||| || |||||||||||| ||||||||||||| |||||||| ||| |||| ||||    
T  12188380 aaacccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattc 12188303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 2970270 - 2970237
Alignment:
Q  20 gtgaataagtgaggtgtccggggtttgaacctcg 53  Q
    ||||||||||| ||||||||||||||||||||||    
T  2970270 gtgaataagtggggtgtccggggtttgaacctcg 2970237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 3869703 - 3869771
Alignment:
Q  261 ttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||||||| |||||||| |||||| || ||| ||||||||| || ||||||||||| |||| ||||    
T  3869703 ttgggttggcctgatggtgtt-ggcttgagatcttcgagtgtgcttctatcaaggtctcatgttcgattc 3869771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 11007184 - 11007233
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||    
T  11007184 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 11007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 20213070 - 20213119
Alignment:
Q  284 gcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||| ||||||    
T  20213070 gcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccc 20213119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 20863401 - 20863442
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcag 321  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  20863401 ttggcttgggactttggagtgtgctcctcctcaaggtctcag 20863442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 22107093 - 22107142
Alignment:
Q  284 gcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||| ||||||    
T  22107093 gcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccc 22107142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 23910157 - 23910116
Alignment:
Q  285 cttgggaccttggagtgtgctcct-ctcaaggtctcaggttc 325  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  23910157 cttgggacctgggagtgtgctcctcctcaaggtctcaggttc 23910116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 27869758 - 27869717
Alignment:
Q  283 ggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||||||| || |||||||||||||||||| |||||||||    
T  27869758 ggcttgggactttagagtgtgctcctctcaagatctcaggtt 27869717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 9843957 - 9844001
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||||||| |||||||| |||||||||  |||||||||||||    
T  9843957 ttggcttgggatcttggagtttgctcctctagaggtctcaggttc 9844001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 13569502 - 13569546
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||||| | |||||||| || |||||||||||||||||||||    
T  13569502 ttggcttggaatcttggagtttgttcctctcaaggtctcaggttc 13569546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 13574048 - 13574092
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||||| | ||| ||||||| |||||||||||||||||||||    
T  13574048 ttggcttggaatcttagagtgtgttcctctcaaggtctcaggttc 13574092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 13576587 - 13576631
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||||| | ||| ||||||| |||||||||||||||||||||    
T  13576587 ttggcttggaatcttagagtgtgttcctctcaaggtctcaggttc 13576631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 14932582 - 14932626
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    ||||||||| |||||| |||||||||||||||| |||| ||||||    
T  14932582 ttggcttggaaccttgaagtgtgctcctctcaatgtcttaggttc 14932626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 324
Target Start/End: Complemental strand, 31623041 - 31622997
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 324  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||    
T  31623041 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 31622997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 336
Target Start/End: Original strand, 34444833 - 34444885
Alignment:
Q  285 cttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccctg 336  Q
    ||||||||||| |||||||||||| | ||||||||||||||| |||| |||||    
T  34444833 cttgggaccttagagtgtgctcctccccaaggtctcaggttcgattctccctg 34444885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 26688865 - 26688937
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttca 326  Q
    |||||| ||||||||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  26688865 aacccacttgggttggcctggtggtgtt-ggcttgggaccttggagtgtgctcctcctcaaggtctcaggttca 26688937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 6530807 - 6530882
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  ||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  6530807 aacccacttgggttggcctggtggtgtt-ggcttgggacctaggagtgtgctcctctcaatgtctcaggttcgattc 6530882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 320
Target Start/End: Complemental strand, 22269010 - 22268944
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    ||||||| ||||||||||||  ||||||| |||||||||||||||||||||||| |||||||||||||    
T  22269010 aaacccacttgggttggcctggtggtgtt-ggcttgggaccttggagtgtgctcttctcaaggtctca 22268944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 324
Target Start/End: Complemental strand, 40137012 - 40136969
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40137012 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 40136969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 3524451 - 3524401
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  3524451 ttggcttgggaccttggagtgtgctcctcctcaaggtcttaggttcaattc 3524401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 6536546 - 6536596
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  6536546 ttggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattc 6536596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 325
Target Start/End: Original strand, 22779683 - 22779725
Alignment:
Q  283 ggcttgggaccttggagtgtgctcctctcaaggtctcaggttc 325  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  22779683 ggcttgggaccttggaatgtgctcctctcaaggtctcaggttc 22779725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 9126631 - 9126582
Alignment:
Q  283 ggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||||    
T  9126631 ggcttgggaccttggagtgtgctcctctcaaggactcaagttcgattccc 9126582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 34639384 - 34639343
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcagg 322  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  34639384 ttggcttgggatcttggagtgtgctcctctcaaggtctcagg 34639343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 2203494 - 2203568
Alignment:
Q  256 cccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||| ||||||||||||  |||| || |||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  2203494 cccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattc 2203568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 3624582 - 3624656
Alignment:
Q  256 cccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattc 330  Q
    |||| ||||||||||||  |||| || |||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  3624582 cccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattc 3624656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 319
Target Start/End: Complemental strand, 5438485 - 5438450
Alignment:
Q  284 gcttgggaccttggagtgtgctcctctcaaggtctc 319  Q
    ||||||||||||||||||||||||||||||||||||    
T  5438485 gcttgggaccttggagtgtgctcctctcaaggtctc 5438450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 19703564 - 19703482
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattccccct 335  Q
    ||||||| ||||||||||||  |||| || ||||||||||||  |||||||||||| ||||||||||||||||| |||| ||||    
T  19703564 aaacccacttgggttggcctagtggtatt-ggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccct 19703482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 26169023 - 26168968
Alignment:
Q  284 gcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatg 339  Q
    |||||||| |||||||| |||||||||||||||||||||||  ||||| |||||||    
T  26169023 gcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatg 26168968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 27750730 - 27750808
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaattccc 332  Q
    ||||||||||||||| |||| |||| |  |||||||||| | |||||||||||||| |||||||||||||||| ||||||    
T  27750730 aacccatttgggttgccctcgtggtata-ggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccc 27750808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 16852339 - 16852416
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||||||  |||| || |||||||||||| ||||||||||||| ||| ||||||||||||| ||||    
T  16852339 aaacccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattc 16852416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 18897165 - 18897242
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||||||  ||||||| || |||||||||| |||||||||||| |||||||||||| |||| ||||    
T  18897165 aaacccacttgggttggcctagtggtgtt-ggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattc 18897242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 29206343 - 29206420
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||| | ||||||||||  ||||||  ||||||| ||||||| |||||||||||||||||| |||||||| ||||    
T  29206343 aaaacccactagggttggcctggtggtgtg-ggcttggtaccttggggtgtgctcctctcaaggtgtcaggttcgattc 29206420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 324
Target Start/End: Original strand, 38463910 - 38463951
Alignment:
Q  283 ggcttgggaccttggagtgtgctcctctcaaggtctcaggtt 324  Q
    |||||||||||| |||||||||||||||| ||||||||||||    
T  38463910 ggcttgggacctaggagtgtgctcctctctaggtctcaggtt 38463951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 1372563 - 1372519
Alignment:
Q  297 gagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||    
T  1372563 gagtgtgctcctcttaaggtctcaggttcgattccctctgatgtc 1372519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 11793598 - 11793527
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 324  Q
    ||||||| ||||||||| ||  ||||||| | |||||||||||||||||||||||| |||||||||| |||||    
T  11793598 aaacccacttgggttggtcttgtggtgttcg-cttgggaccttggagtgtgctcctcctcaaggtcttaggtt 11793527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 15974932 - 15974980
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttcaattcccc 333  Q
    ||||||| |||||||| ||||||||||||||||||| |||| |||||||    
T  15974932 cttgggatcttggagtatgctcctctcaaggtctcaagttcgattcccc 15974980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 3734801 - 3734750
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||||    
T  3734801 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 3734750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 41070788 - 41070835
Alignment:
Q  285 cttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||| ||||||||||||| |||||||||||||| |||| ||||||    
T  41070788 cttgggatcttggagtgtgctactctcaaggtctcaagttcgattccc 41070835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 968388 - 968438
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||| ||||    
T  968388 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattc 968438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 316
Target Start/End: Complemental strand, 17727506 - 17727441
Alignment:
Q  250 tgaaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggt 316  Q
    |||||||||| ||||||||| ||| ||||||| | |||| |||||  ||||||||||||||||||||    
T  17727506 tgaaaacccacttgggttggtctcgtggtgtt-gacttgagacctcagagtgtgctcctctcaaggt 17727441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 34778735 - 34778800
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    |||||| ||||||| ||||  ||||||| |||||| ||||||| ||||||||||| |||||||||||    
T  34778735 aacccacttgggtttgcctggtggtgtt-ggcttgagaccttgcagtgtgctcctttcaaggtctca 34778800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 1458404 - 1458437
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctc 319  Q
    ||||||||||||||| ||||||||||||||||||    
T  1458404 ttgggaccttggagtatgctcctctcaaggtctc 1458437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 2428111 - 2428144
Alignment:
Q  286 ttgggaccttggagtgtgctcctctcaaggtctc 319  Q
    ||||||||||||||| ||||||||||||||||||    
T  2428111 ttgggaccttggagtatgctcctctcaaggtctc 2428144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 11819776 - 11819852
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||||||||||| |||  |||| |  |||||||||| | ||||||||||||| ||||||||||||||||| ||||    
T  11819776 aacccatttgggttgccctagtggtata-ggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattc 11819852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 16317637 - 16317686
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||||||| ||||||||||||||||  |||||| |||| ||||    
T  16317637 ttggcttgggaccttagagtgtgctcctctcagcgtctcatgttcgattc 16317686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 18540298 - 18540374
Alignment:
Q  254 aacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||| ||||||||||||  |||| || |||||||||||| ||||||| || || ||||||||||||||||| ||||    
T  18540298 aacccacttgggttggcctagtggtatt-ggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattc 18540374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 19957335 - 19957372
Alignment:
Q  20 gtgaataagtgaggtgtccggggtttgaacctcgtccc 57  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  19957335 gtgaataagtggggtgtccggggttcgaacctcgtccc 19957372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 29855460 - 29855419
Alignment:
Q  289 ggaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    |||||||| ||||||||||||| |||||||||||||| ||||    
T  29855460 ggaccttgtagtgtgctcctcttaaggtctcaggttcgattc 29855419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 29858099 - 29858046
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattcccc 333  Q
    |||||||||||||  ||||||||||||| ||| ||||||||||||| |||||||    
T  29858099 ttggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattcccc 29858046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 39317056 - 39317093
Alignment:
Q  294 ttggagtgtgctcctctcaaggtctcaggttcaattcc 331  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  39317056 ttggagtgtgcttctctcaagctctcaggttcaattcc 39317093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 18532130 - 18532190
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatgtc 341  Q
    ||||||||||| |||||||| ||||||||   ||||||||||||| |||||| | ||||||    
T  18532130 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcagatgtc 18532190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 44780191 - 44780120
Alignment:
Q  253 aaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggtt 324  Q
    ||||||| ||||||||||||  |||   |||||||||||| | ||||||||||||| ||||||||||||||||    
T  44780191 aaacccacttgggttggcctagtgg-cattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtt 44780120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 1751 - 1829
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||| |||||||||||||||  ||||||| |||||||||||||||||| ||||||| ||||||||||  ||||||||||    
T  1751 aaaactcatttgggttggcctagtggtgtt-ggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattc 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 12187 - 12253
Alignment:
Q  252 aaaacccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcct-ctcaaggtct 318  Q
    ||||| |||||||||||||||  ||||||| |||||||||||||||||| ||||||| ||||||||||    
T  12187 aaaactcatttgggttggcctagtggtgtt-ggcttgggaccttggagtttgctcctcctcaaggtct 12253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 95021 - 94972
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcaatt 329  Q
    ||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  95021 ttggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaatt 94972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 142179 - 142229
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    ||||||| ||||||||||||||||| || |||||||||| |||||||||||    
T  142179 ttggctttggaccttggagtgtgctactcctcaaggtcttaggttcaattc 142229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 17764 - 17724
Alignment:
Q  290 gaccttggagtgtgctcctctcaaggtctcaggttcaattc 330  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  17764 gaccttggagtgttctcctctcaaggtctcaggttcgattc 17724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 5260 - 5209
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||| ||||||    
T  5260 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 5209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 15373 - 15323
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcaattc 330  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||| ||||    
T  15373 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattc 15323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 339
Target Start/End: Complemental strand, 29320 - 29262
Alignment:
Q  281 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccccctgatg 339  Q
    ||||||||| | |||| |||||| |||||||||||||| |||||| |||||| ||||||    
T  29320 ttggcttggaatcttgaagtgtgttcctctcaaggtcttaggttcgattcccgctgatg 29262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 161826 - 161879
Alignment:
Q  279 gtttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaattccc 332  Q
    ||||||||||||| |||||||| ||||||||   ||||||||||||| ||||||    
T  161826 gtttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 240960 - 240896
Alignment:
Q  255 acccatttgggttggcctcatggtgtttggcttgggaccttggagtgtgctcctctcaaggtctca 320  Q
    ||||| || |||||| || |||||||| || |||||| |||||||| |||||||||||||||||||    
T  240960 acccactttggttggtctgatggtgtt-ggtttgggatcttggagtatgctcctctcaaggtctca 240896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 108375 - 108407
Alignment:
Q  20 gtgaataagtgaggtgtccggggtttgaacctc 52  Q
    ||||||||||| |||||||||||||||||||||    
T  108375 gtgaataagtggggtgtccggggtttgaacctc 108407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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