View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11120_low_7 (Length: 281)

Name: NF11120_low_7
Description: NF11120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11120_low_7
NF11120_low_7
[»] chr8 (6 HSPs)
chr8 (14-275)||(7821817-7822078)
chr8 (14-275)||(25218544-25218805)
chr8 (14-275)||(30307156-30307417)
chr8 (14-275)||(25209026-25209272)
chr8 (14-232)||(31978549-31978767)
chr8 (14-275)||(21113723-21113984)
[»] chr4 (8 HSPs)
chr4 (14-275)||(35855886-35856147)
chr4 (14-275)||(38518075-38518336)
chr4 (14-275)||(49710152-49710412)
chr4 (14-275)||(49786807-49787068)
chr4 (14-275)||(1860656-1860917)
chr4 (120-275)||(13337320-13337475)
chr4 (14-161)||(55559131-55559278)
chr4 (208-275)||(618203-618270)
[»] chr1 (11 HSPs)
chr1 (17-275)||(37390131-37390389)
chr1 (14-275)||(6310973-6311235)
chr1 (14-275)||(16042004-16042265)
chr1 (14-275)||(2453096-2453357)
chr1 (14-270)||(2329148-2329401)
chr1 (14-269)||(36207194-36207449)
chr1 (14-275)||(18148667-18148928)
chr1 (14-212)||(48238519-48238717)
chr1 (14-275)||(48775314-48775575)
chr1 (14-161)||(52500648-52500795)
chr1 (155-270)||(48233498-48233613)
[»] chr3 (13 HSPs)
chr3 (14-275)||(32750-33011)
chr3 (14-275)||(10110579-10110840)
chr3 (14-275)||(10000386-10000647)
chr3 (14-262)||(50410151-50410399)
chr3 (14-275)||(10968761-10969021)
chr3 (14-275)||(52918045-52918305)
chr3 (14-275)||(13530018-13530279)
chr3 (14-265)||(10237535-10237785)
chr3 (14-275)||(11368625-11368888)
chr3 (16-275)||(11362239-11362499)
chr3 (14-209)||(46913050-46913245)
chr3 (18-202)||(10038623-10038807)
chr3 (14-181)||(47692948-47693115)
[»] chr7 (8 HSPs)
chr7 (14-275)||(7036699-7036960)
chr7 (14-275)||(12781127-12781389)
chr7 (14-275)||(12785957-12786218)
chr7 (14-275)||(21070041-21070302)
chr7 (14-275)||(9001124-9001385)
chr7 (14-275)||(5828534-5828795)
chr7 (23-275)||(22843792-22844044)
chr7 (14-161)||(42232063-42232210)
[»] chr5 (13 HSPs)
chr5 (14-275)||(8428553-8428814)
chr5 (14-275)||(37372915-37373176)
chr5 (14-267)||(27881063-27881316)
chr5 (14-275)||(39883162-39883423)
chr5 (14-275)||(25542772-25543033)
chr5 (14-275)||(14192791-14193052)
chr5 (23-275)||(17871616-17871868)
chr5 (19-275)||(3689961-3690217)
chr5 (19-275)||(3876570-3876826)
chr5 (14-161)||(10025042-10025189)
chr5 (14-161)||(24629954-24630101)
chr5 (14-202)||(37261294-37261482)
chr5 (14-161)||(30346637-30346784)
[»] chr2 (11 HSPs)
chr2 (14-275)||(41920152-41920413)
chr2 (14-275)||(21395349-21395610)
chr2 (14-275)||(28666151-28666412)
chr2 (14-275)||(37824985-37825246)
chr2 (14-275)||(27192468-27192729)
chr2 (14-275)||(27842282-27842543)
chr2 (14-275)||(24269049-24269310)
chr2 (14-275)||(27509353-27509614)
chr2 (22-275)||(24245812-24246065)
chr2 (14-270)||(17683813-17684069)
chr2 (14-215)||(35609664-35609865)
[»] chr6 (8 HSPs)
chr6 (16-275)||(29640007-29640266)
chr6 (16-275)||(31510178-31510437)
chr6 (14-276)||(15333622-15333884)
chr6 (14-276)||(18344104-18344366)
chr6 (14-275)||(2202158-2202419)
chr6 (23-275)||(30881315-30881567)
chr6 (14-270)||(10187523-10187779)
chr6 (14-169)||(12517367-12517522)
[»] scaffold0090 (1 HSPs)
scaffold0090 (14-275)||(48915-49176)
[»] scaffold0073 (2 HSPs)
scaffold0073 (14-275)||(31912-32172)
scaffold0073 (14-248)||(19436-19670)
[»] scaffold0002 (1 HSPs)
scaffold0002 (14-275)||(321315-321576)
[»] scaffold0550 (1 HSPs)
scaffold0550 (14-270)||(556-812)
[»] scaffold0017 (1 HSPs)
scaffold0017 (14-275)||(186534-186794)
[»] scaffold0134 (1 HSPs)
scaffold0134 (14-275)||(5239-5499)
[»] scaffold1139 (1 HSPs)
scaffold1139 (18-275)||(983-1240)
[»] scaffold0262 (1 HSPs)
scaffold0262 (17-270)||(18988-19241)
[»] scaffold0356 (1 HSPs)
scaffold0356 (14-275)||(17855-18109)
[»] scaffold0003 (2 HSPs)
scaffold0003 (18-275)||(182794-183051)
scaffold0003 (16-275)||(165511-165771)
[»] scaffold0025 (1 HSPs)
scaffold0025 (14-233)||(16663-16882)
[»] scaffold0118 (1 HSPs)
scaffold0118 (14-161)||(28727-28874)
[»] scaffold0888 (1 HSPs)
scaffold0888 (14-132)||(24-142)
[»] scaffold1424 (1 HSPs)
scaffold1424 (14-86)||(1627-1699)
[»] scaffold0107 (1 HSPs)
scaffold0107 (216-267)||(39937-39988)


Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 7821817 - 7822078
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||||||||||||||||||    
T  7821817 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctgaaatcagcgacatcataaattcgttaacatgct 7821916  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  7821917 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcggaatacacaaagtctataagtga 7822016  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  7822017 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 7822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 25218805 - 25218544
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  25218805 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 25218706  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25218705 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 25218606  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  25218605 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 25218544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 30307156 - 30307417
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  30307156 tggacatcagaattttcacccgatctaaaaatagaatcggagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 30307255  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  30307256 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcgttcagatcgggatacacaaagtctataagtga 30307355  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||| ||||    
T  30307356 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctacattcatttcac 30307417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 25209272 - 25209026
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  25209272 tggacatcagaattttcgcccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 25209173  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               |||||||||||||||    
T  25209172 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatt---------------aaagtctataagtga 25209088  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||| ||||    
T  25209087 catcaacggatttgttgtgtctgacatcagcaaatcttcaggaatttctaccttcatttcac 25209026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 31978767 - 31978549
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| ||| |||||||    
T  31978767 tggacatctgaattttcccccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgct 31978668  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  31978667 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtga 31978568  T
Q  214 catcaacggatttgttgtg 232  Q
    ||||||| |||||||||||    
T  31978567 catcaacagatttgttgtg 31978549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 21113984 - 21113723
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||| |    
T  21113984 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 21113885  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||||||||||    
T  21113884 caactgaatcaagcgttggtgcaagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtga 21113785  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  21113784 catcaacagatttgttgtgtccgatataagcaaatcttcaggaatttctaccttcatttcac 21113723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 35855886 - 35856147
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  35855886 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 35855985  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35855986 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 35856085  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  35856086 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 35856147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 38518075 - 38518336
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  38518075 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 38518174  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38518175 caattgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacaaagtctataagtga 38518274  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  38518275 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 38518336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 49710152 - 49710412
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  49710152 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 49710251  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49710252 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 49710351  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||| |||||||||||||  |||||||| |||||||||||||||||||||||||| ||||    
T  49710352 catcaa-ggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 49710412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 49787068 - 49786807
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||    
T  49787068 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaatatgct 49786969  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  49786968 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 49786869  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  49786868 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 49786807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 1860656 - 1860917
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| ||||||  ||||| ||| |||||||||||||||    
T  1860656 tggacatcagaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcacccagaatcagtgacatcatatattcgttaacatgct 1860755  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  1860756 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 1860855  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||||||  ||||| || ||||||| |||||||||||||||||| ||||    
T  1860856 catcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatttcac 1860917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 120 - 275
Target Start/End: Original strand, 13337320 - 13337475
Alignment:
Q  120 aatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatcaa 219  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| ||||||||||||||||||||||||| ||    
T  13337320 aatcaagcgttgatgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacataaa 13337419  T
Q  220 cggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||  |||||||| ||||||||| |||||||||||||||| ||||    
T  13337420 cggatttgttgtgtccgatatcagcaaatcttcatgaatttctaccttcatttcac 13337475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 55559278 - 55559131
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||| |    
T  55559278 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 55559179  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55559178 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 55559131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 618270 - 618203
Alignment:
Q  208 aagtgacatcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||| ||||||||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  618270 aagtgacatgaacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 618203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 17 - 275
Target Start/End: Complemental strand, 37390389 - 37390131
Alignment:
Q  17 acatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaa 116  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  37390389 acatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaa 37390290  T
Q  117 ctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37390289 ctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacat 37390190  T
Q  217 caacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  37390189 caacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 37390131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 6311235 - 6310973
Alignment:
Q  14 tggacatcagaattttcacccgatct-aaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgc 112  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  6311235 tggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 6311136  T
Q  113 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6311135 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtg 6311036  T
Q  213 acatcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||||    
T  6311035 acatcaacggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatttcac 6310973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 16042004 - 16042265
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||    
T  16042004 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 16042103  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||||||||||| ||    
T  16042104 caactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagattgggatacacaaagtctataagcga 16042203  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||||    
T  16042204 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 16042265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 2453357 - 2453096
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| ||||| |  ||||| ||| |||||||||||||||    
T  2453357 tggacatcagaattttcacccgatcgacaaatagaatcagagcctaaatactctttctcttcacctggaattagtgacatcatatattcgttaacatgct 2453258  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| || ||||||||||||||||||    
T  2453257 caactcaataaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcggaattcacaaagtctataagtga 2453158  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||||    
T  2453157 catcaacggatttgttgtgttcgatatgagcaaatcttcaggaatttctaccttcatttcac 2453096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 2329148 - 2329401
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  2329148 tggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 2329247  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||||| | ||||||||||||   ||||||||||||    
T  2329248 cgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtggatcaccaaggttatcattcaaatcgggatacac---gtctataagtga 2329344  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcat 270  Q
    ||||||||||||||||||||  ||||| || ||||||||||||||||||||||||||    
T  2329345 catcaacggatttgttgtgtccgatatgagaaaatcttcaggaatttctaccttcat 2329401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 36207194 - 36207449
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| | ||| | ||||| ||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  36207194 tggacatcataattttcacccgatcgacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 36207293  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||  ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  36207294 caactgaatcaattgttggggcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 36207393  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttca 269  Q
    ||||||||||||||||||||  ||||| || ||||| |||||||||||||||||||    
T  36207394 catcaacggatttgttgtgtcggatatgagaaaatcatcaggaatttctaccttca 36207449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 18148667 - 18148928
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||| |||||||||| |||||| | ||| ||||| ||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  18148667 tggacataagaattttcatccgatcgacaaacagaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 18148766  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || | ||||||||||||| ||||||||    
T  18148767 caaatgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaattgagatacacaaagtcgataagtga 18148866  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||||||  ||||| || |||||||||  ||||||||||||||| ||||    
T  18148867 catcaacagatttgttgtgtccgatatgagaaaatcttcataaatttctaccttcatttcac 18148928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 48238717 - 48238519
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| | ||||||||||||| | ||| |||||||||||||||||||||||||||||| || ||||||| |||||| ||| |||||||||||||||    
T  48238717 tggacatcaaagttttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgttaacatgct 48238618  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtg 212  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||| |||||||||||||| | ||||||||||||||||||||||||||    
T  48238617 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtg 48238519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 48775575 - 48775314
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||| ||||  ||||||| | |||  |||||||||||||||||||||||||||||||| |||||||   |||| ||| |||||||||||||||    
T  48775575 tggacatcagactttttgcccgatcgacaaactgaatcagagcttaaatactctttctcttcacctggaatcatttacatcatatattcgttaacatgct 48775476  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||| |||||||||   ||||||||| ||||||| ||| |||||    
T  48775475 caaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaagagcaggtcaccaatgttatcattctaatcgggatatacaaagtgtattagtga 48775376  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||| | |||||||||||  ||||| || |||||||| ||||||||||||||||| ||||    
T  48775375 catcaaagaatttgttgtgtcggatatgagcaaatcttcgggaatttctaccttcatttcac 48775314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 52500648 - 52500795
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||| |    
T  52500648 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 52500747  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52500748 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 52500795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 155 - 270
Target Start/End: Original strand, 48233498 - 48233613
Alignment:
Q  155 aaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatcaacggatttgttgtgtttgatatcagtaaatcttcag 254  Q
    ||||||||  |||| |||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  48233498 aaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcagcggatttgttgtgttcgatatgagtaaatcttcag 48233597  T
Q  255 gaatttctaccttcat 270  Q
    ||||||||||||||||    
T  48233598 gaatttctaccttcat 48233613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 32750 - 33011
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||    
T  32750 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 32849  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  32850 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtccataagtga 32949  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  32950 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 33011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 10110579 - 10110840
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| | ||||| ||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  10110579 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10110678  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||| |||||||    
T  10110679 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10110778  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||| || |||||| || |||||||||||||||||||||||||| ||||    
T  10110779 catcaacagatttgttgcgtctgatatgagcaaatcttcaggaatttctaccttcatttcac 10110840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 10000386 - 10000647
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| | ||||| ||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  10000386 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10000485  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||| |||||||    
T  10000486 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10000585  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
     |||||| |||||||||  | |||||| || |||||||||||||||||||||||||| ||||    
T  10000586 tatcaacagatttgttgcatctgatatgagcaaatcttcaggaatttctaccttcatttcac 10000647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 50410151 - 50410399
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| ||| |||||||||||    
T  50410151 tggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatatttgttaacatgct 50410250  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||||| | |||||||||||||||||||||||||||    
T  50410251 cgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtgggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtga 50410350  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttct 262  Q
    ||||| ||||||||||||||  ||||| || ||||||||||||||||||    
T  50410351 catcagcggatttgttgtgtccgatatgagaaaatcttcaggaatttct 50410399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 10969021 - 10968761
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| | ||| ||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  10969021 tggacatcagaattttcacccgatcgacaaacaaaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10968922  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
     |||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| ||| |||||||| | ||||||||||||||||||||||||||     
T  10968921 aaactgaatcaagcgttggtgcgagtattccccttgcttagaaaaatagcaggtcacgaagtttatcattcaaatcgggatacacaaagtctataagtgg 10968822  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||  |||||||| ||||| |||| ||||||||||||||| ||||    
T  10968821 catcaacggatttgttgtgtccgatatcagcaaatc-tcagaaatttctaccttcatttcac 10968761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 52918045 - 52918305
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  52918045 tggacatcagaattttcacccgatcgacaaacaaaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 52918144  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||||| |||||||||||||     
T  52918145 caactgaatcaagcgttggtgcgggtattcccctttcttggaaaaatagcgagtcaccaaggttatcattcaaatcgggatacacgaagtctataagtgg 52918244  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||||||  | || | | ||||| |||||||||||||||||||| ||||    
T  52918245 catcaacagatttgttgtgtccggtaacggcaaatc-tcaggaatttctaccttcatttcac 52918305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 13530018 - 13530279
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||| || |||||||||| |||| | ||  |||| |||||||||||||||||||||||||||| ||| |||  ||||| ||| ||||||||| |||||    
T  13530018 tggacaccaaaattttcacctgatcgacaagcagaaccagagcttaaatactctttctcttcacctggactcagtgacatcatatattcgttaaaatgct 13530117  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  13530118 caactgaatgaagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 13530217  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| |||||| |  ||||||||  |||||||||||||||| ||||    
T  13530218 catcaacggatttgttgtgtctgatatgaccaaatcttctagaatttctaccttcatttcac 13530279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 10237535 - 10237785
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| | ||||| ||||||| ||||||||||||||||| |||||||   |||| ||| |||||||||||||||    
T  10237535 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaa-tactctttctcttcacctggaatcagtaacatcatatattcgttaacatgct 10237633  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | |||| |||||||||||||| |||||||    
T  10237634 caactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10237733  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctacc 265  Q
    ||||||| ||||||||| || |||||| || || ||||||||||||||||||    
T  10237734 catcaacagatttgttgcgtctgatatgagcaattcttcaggaatttctacc 10237785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 11368625 - 11368888
Alignment:
Q  14 tggacatcagaatttt-cacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgc 112  Q
    ||||||||||| |||| ||||| ||| | |||| |||||||||||||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||||    
T  11368625 tggacatcagactttttcacccaatcgacaaattgaatcagagcttaaatactctttctcttcacctggaatcactgacatcatatattcgttaacatgc 11368724  T
Q  113 tcaactgaatcaagcgttggtgcgagtattcccctttcttgg-aaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagt 211  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||| ||||||||| | ||||||||| ||||||||||| |||    
T  11368725 tcaaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaaagagcgggtcaccaatgttatcattcaaatcgggatatacaaagtctatgagt 11368824  T
Q  212 gacatcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||||  ||||| || |||||||| ||||||||||| ||||| ||||    
T  11368825 gacatcaacggatttgttgtgtcggatatgagcaaatcttcgggaatttctacattcatttcac 11368888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 16 - 275
Target Start/End: Original strand, 11362239 - 11362499
Alignment:
Q  16 gacatcagaattttcacccgatctaaaaatagaatcagagcttaaatac-tctttctcttcacccggaatcaacgacatgataaattcgttaacatgctc 114  Q
    ||||||||| ||||| ||||||| | |||  ||||||||||||||| |  |||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  11362239 gacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctc 11362338  T
Q  115 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgac 214  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||| | ||||||||| ||||||||||| ||||||    
T  11362339 aaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgac 11362438  T
Q  215 atcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||| |  ||||| ||||||||||| ||||||||  ||||||| ||||    
T  11362439 atcaacgaatttgttgtatcggatatgagtaaatcttcgggaatttcccccttcatttcac 11362499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 46913050 - 46913245
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||| | ||||||| | ||| | ||||| |||||||||||| ||| |||||||| |||||    ||||| ||| |||||||||||||||    
T  46913050 tggacatcagaatttccccccgatcgacaaacataatcaaagcttaaatactatttttcttcacctggaattggtgacatcatatattcgttaacatgct 46913149  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataa 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||| | |||||||||||||||||||||||    
T  46913150 caactgaatcaagcgttggtgcgagtattctcctttcttggaaaaatagcgggtcgccaaagttatcattcaaatcgggatacacaaagtctataa 46913245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 10038623 - 10038807
Alignment:
Q  18 catcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaac 117  Q
    ||||||||||||||||||||| | ||| ||||| |||||||||||| | |||||||||||| |||||||  ||||| ||| |||| |||| ||||||||     
T  10038623 catcagaattttcacccgatcgacaaacagaatgagagcttaaataatatttctcttcacctggaatcagtgacatcatatattcattaatatgctcaat 10038722  T
Q  118 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaag 202  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| | || |||||||||||||    
T  10038723 tgaatcaagtgttggcgcgagtattcccctttcttggaaaaatagcgggtcactaaggttatcattcaaattgggatacacaaag 10038807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 47692948 - 47693115
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||  |||||| | ||| |||||||||| |||||||||||||||||||||| ||||| |  ||||| ||  |||||||||||||||    
T  47692948 tggacatcagaattttcgtccgatcgacaaacagaatcagaggttaaatactctttctcttcacctggaattagtgacatcatgtattcgttaacatgct 47693047  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatca 181  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||||||||||    
T  47693048 caactgaatcaagcgttggtgcgaggattcccctttcttgggaaaattgtgggtcaccaaggttatca 47693115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 7036699 - 7036960
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  7036699 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 7036798  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7036799 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaagtagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 7036898  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||||    
T  7036899 catcaacggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatttcac 7036960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 12781389 - 12781127
Alignment:
Q  14 tggacatcagaattttcacccgatct-aaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgc 112  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  12781389 tggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 12781290  T
Q  113 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12781289 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtg 12781190  T
Q  213 acatcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||| ||||    
T  12781189 acatcaacggatttgttgtgtcttatatcagcaaatcttcaggaatttctaccttcatttcac 12781127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 12786218 - 12785957
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||    
T  12786218 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 12786119  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  12786118 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 12786019  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  12786018 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 12785957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 21070302 - 21070041
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||  ||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  21070302 tggacatctaaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcaccaggaatcagtgacatcatatattcgttaacatgct 21070203  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  21070202 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcaggttaccaaggttatcattcagatcgggatacacaaagtctataagtga 21070103  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||| ||||    
T  21070102 catcaacggatttgttgtgtctgatatgagcaaatcttcaggaatttctaccttcatttcac 21070041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 9001385 - 9001124
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||    
T  9001385 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 9001286  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||| ||    
T  9001285 caactgaatcaagcgttagtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcaatcagatcgggataaacaaagtctataagaga 9001186  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||  |||||||  ||||||||| |||||||||||||||| ||||    
T  9001185 catcaacggatttgttgtgtccgatatcaacaaatcttcaagaatttctaccttcatttcac 9001124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 5828795 - 5828534
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  5828795 tggacatcataattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 5828696  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  5828695 caactgagtcaagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 5828596  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||  ||||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  5828595 catcaaaagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 5828534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 23 - 275
Target Start/End: Original strand, 22843792 - 22844044
Alignment:
Q  23 gaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaactgaat 122  Q
    |||||||||||||||| | ||| |||| |||| ||||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||||| ||||    
T  22843792 gaattttcacccgatcgacaaacagaaacagaacttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 22843891  T
Q  123 caagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatcaacgg 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||| |    
T  22843892 caagcgttggtgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacag 22843991  T
Q  223 atttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||  ||||| || ||||||||| |||||||||||||||| ||||    
T  22843992 atttgttgtgtcagatatgagcaaatcttcaagaatttctaccttcatttcac 22844044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 42232063 - 42232210
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | | ||| | |||||||| |||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||| |    
T  42232063 tggacatcagaattttcacccgagcgacaaacaaaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 42232162  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42232163 caactgaatcaagcgttggtgagagtattcccctttcttggaaaaata 42232210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 8428814 - 8428553
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  8428814 tggacatcagaatattcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 8428715  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8428714 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 8428615  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  8428614 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 8428553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 37372915 - 37373176
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| ||||||| |||||||||||    
T  37372915 tggacatcagaattatcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcataaattggttaacatgct 37373014  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37373015 caactgaatcaagcgttggtgcgagtattcccctttcttcgaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 37373114  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| ||||    
T  37373115 catcaacggatttgttatgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 37373176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 27881063 - 27881316
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||||||||||    
T  27881063 tggacatcataattttcacccgatctacaaatagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 27881162  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27881163 cagctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 27881262  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctacctt 267  Q
    ||||||||||||||||| ||  |||||||| |||||||||||| ||||||||||    
T  27881263 catcaacggatttgttgggtccgatatcagcaaatcttcaggagtttctacctt 27881316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 39883162 - 39883423
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  39883162 tggacatcataattgtcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcaacgacatcataaattcgttaacatgct 39883261  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  39883262 caactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagatcgggatacacaaagtctataagtga 39883361  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||  |||||||| ||||||| |||||| ||||||||||| ||||    
T  39883362 catcaacggatttgttgtgtccgatatcagcaaatctttaggaatatctaccttcatttcac 39883423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 25543033 - 25542772
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  25543033 tggacatcataattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 25542934  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  25542933 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 25542834  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||  |||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  25542833 catcaacatatttgttgtgtccgatatgagaaaatcttcaggaatttctaccttcatttcac 25542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 14193052 - 14192791
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  14193052 tggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 14192953  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | |||||||||||||||||||||||||||    
T  14192952 caactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 14192853  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||||||  ||||| || |||||||||| ||||||||||||||| ||||    
T  14192852 catcaacagatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcatttcac 14192791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 23 - 275
Target Start/End: Complemental strand, 17871868 - 17871616
Alignment:
Q  23 gaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaactgaat 122  Q
    |||||||||||||||| | ||| |||| |||||||||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||||| ||||    
T  17871868 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 17871769  T
Q  123 caagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatcaacgg 222  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||    
T  17871768 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacgg 17871669  T
Q  223 atttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  17871668 atttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 17871616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 19 - 275
Target Start/End: Original strand, 3689961 - 3690217
Alignment:
Q  19 atcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaact 118  Q
    |||||||||||| ||||||| | |||  ||||||||||||||||||||||||||| |||  |||||||  ||||| ||| |||||||||||||||||||     
T  3689961 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3690060  T
Q  119 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatca 218  Q
    ||||||||||||||||||||||||| | ||||||| ||||| ||  ||||||||| ||||||||| | ||||||||| |||||||| || ||||||||||    
T  3690061 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtcaccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3690160  T
Q  219 acggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||| ||||||||| |  ||||| || |||||||  ||||||||||||||||| ||||    
T  3690161 acgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatttcac 3690217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 275
Target Start/End: Complemental strand, 3876826 - 3876570
Alignment:
Q  19 atcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaact 118  Q
    |||||||||||| ||||||| | |||  ||||||||||||||||||||||||||| |||  |||||||  ||||| ||| |||||||||||||||||||     
T  3876826 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3876727  T
Q  119 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatca 218  Q
    ||||||||||||||||||||||||| | ||||||| ||||| ||  |||| |||| ||||||||| | ||||||||| |||||||| || ||||||||||    
T  3876726 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtccccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3876627  T
Q  219 acggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||| ||||||||| |  ||||| || |||||||  ||||||||||||||||| ||||    
T  3876626 acgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatttcac 3876570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 10025042 - 10025189
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||||  |||||||| ||||| ||| ||||||||||||| |    
T  10025042 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacttggaatcaatgacatcatatattcgttaacatgtt 10025141  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10025142 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 10025189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 24630101 - 24629954
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||| |    
T  24630101 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 24630002  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630001 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 24629954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 37261294 - 37261482
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| | ||| |||||||||||||||||||| |||||||||||| |||||||  ||||| ||| |||| |||| |||||    
T  37261294 tggacatcaaaattttcacccgatcgacaaacagaatcagagcttaaatactatttctcttcacctggaatcagtgacatcatatattcattaatatgct 37261393  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaag 202  Q
    ||||||||||||| ||||| || ||||||||||||||||| ||||||| | |||||  |||||||||||| | || |||||||||||||    
T  37261394 caactgaatcaagtgttggcgcaagtattcccctttcttgaaaaaataacgggtcattaaggttatcattcaaattgggatacacaaag 37261482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 30346784 - 30346637
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||| |    
T  30346784 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 30346685  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  30346684 caacttaatcaagtgttggtgcgagtattcccctttcttggaaaaata 30346637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 41920413 - 41920152
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  41920413 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttatcttcacctggaatcaacgacatcataaattcgttaacatgct 41920314  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
     || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41920313 taattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 41920214  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  41920213 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 41920152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 21395349 - 21395610
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  21395349 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 21395448  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||    
T  21395449 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatatacaaagtctataagcga 21395548  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||||    
T  21395549 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 21395610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 28666412 - 28666151
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||    
T  28666412 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 28666313  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  28666312 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 28666213  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  28666212 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 28666151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 37825246 - 37824985
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||    
T  37825246 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 37825147  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  37825146 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacagagtctataagtga 37825047  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  37825046 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 37824985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 27192468 - 27192729
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||||  |||||| |||||| ||| |||||||||||||||    
T  27192468 tggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgct 27192567  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  27192568 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27192667  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||||||  ||||| || ||||||| |||||||||||||||||| ||||    
T  27192668 catcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatttcac 27192729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 27842282 - 27842543
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||||  |||||| |||||| ||| |||||||||||||||    
T  27842282 tggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgct 27842381  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  27842382 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27842481  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||||||  ||||| || ||||||| |||||||||||||||||| ||||    
T  27842482 catcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatttcac 27842543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 24269310 - 24269049
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | | ||| |||||||||| |||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||| |    
T  24269310 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 24269211  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  24269210 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 24269111  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  24269110 catcaacagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 24269049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 27509353 - 27509614
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||| ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  27509353 tggacattagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 27509452  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  27509453 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27509552  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
     ||||||| |||||||||||  || || || ||||||| |||||||||||||||||||||||    
T  27509553 tatcaacgaatttgttgtgtccgacatgagcaaatctttaggaatttctaccttcatctcac 27509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 22 - 275
Target Start/End: Original strand, 24245812 - 24246065
Alignment:
Q  22 agaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaactgaa 121  Q
    ||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||||||||||    
T  24245812 agaattttcacccgatcgacaaacagaatcagatcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 24245911  T
Q  122 tcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatcaacg 221  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||||||| |||    
T  24245912 tcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaggtctataagtgacatccacg 24246011  T
Q  222 gatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||  | ||| || ||||||| |||||||||||||||||| ||||    
T  24246012 gatttgttgtgtccgttatgagcaaatctttaggaatttctaccttcatttcac 24246065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 14 - 270
Target Start/End: Complemental strand, 17684069 - 17683813
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| | ||| | ||||| ||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  17684069 tggacatcaaaattttcacccgatcgacaaacaaaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 17683970  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  17683969 caattgaatcaagcgttggagcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 17683870  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcat 270  Q
    ||||||||||||||||||||   |||| ||  ||| |||||||||||||||||||||    
T  17683869 catcaacggatttgttgtgtccaatatgagcgaatattcaggaatttctaccttcat 17683813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 35609664 - 35609865
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||| ||||| | ||| | ||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||| ||    
T  35609664 tggacatcagaattttcactcgatcgacaaacataatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatact 35609763  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | ||||| |||||||||||||||||||||    
T  35609764 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaatgttatcattcaaatcggaatacacaaagtctataagtga 35609863  T
Q  214 ca 215  Q
    ||    
T  35609864 ca 35609865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 275
Target Start/End: Complemental strand, 29640266 - 29640007
Alignment:
Q  16 gacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctca 115  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  29640266 gacatcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 29640167  T
Q  116 actgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgaca 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  29640166 actgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcaggatacacaaagtctataagtgaca 29640067  T
Q  216 tcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  29640066 tcaacagatttgttgtggttgatatcagcaaatcttcaggaatttctaccttcatttcac 29640007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 16 - 275
Target Start/End: Complemental strand, 31510437 - 31510178
Alignment:
Q  16 gacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctca 115  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  31510437 gacatcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 31510338  T
Q  116 actgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgaca 215  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  31510337 actgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagttggtcaccaaggttatcattcagattaggatacacaaagtctataagtgaca 31510238  T
Q  216 tcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||| ||||||||||| |||||||||| ||||||| || ||||||||||||||| ||||    
T  31510237 tcaacagatttgttgtggttgatatcagcaaatcttaagaaatttctaccttcatttcac 31510178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 276
Target Start/End: Original strand, 15333622 - 15333884
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  15333622 tggacatcagaattttcacctgatctacaaacagaatcagagcctaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 15333721  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  15333722 caactgaatcaagtgttggtgcgagtattcccatttgttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctattagtga 15333821  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcact 276  Q
    ||||||||||||||||  ||  |||||||  |||||||||||||||||||||||||| |||||    
T  15333822 catcaacggatttgttacgtacgatatcaacaaatcttcaggaatttctaccttcatttcact 15333884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 14 - 276
Target Start/End: Original strand, 18344104 - 18344366
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||| || ||||||| |||||| ||| |||||| ||||||||    
T  18344104 tggacatcaaaattttcacccgatcgacaaatagaatcaaagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgtcaacatgct 18344203  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18344204 caactgaatcaagcgttggtgcaagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 18344303  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcact 276  Q
    ||| ||||||||||||||||  ||||| || |||||||||||||||||||||||||| |||||    
T  18344304 catgaacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcact 18344366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 2202419 - 2202158
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||| |    
T  2202419 tggacatcagaattttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 2202320  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  2202319 ctactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 2202220  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||| ||||||| ||||| || |||||||| ||||||||||| ||||| ||||    
T  2202219 catcaacggatttattgtgttcgatatgagcaaatcttcgggaatttctacattcatttcac 2202158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 23 - 275
Target Start/End: Original strand, 30881315 - 30881567
Alignment:
Q  23 gaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaactgaat 122  Q
    |||||||||||||||| | ||| |||| |||||||||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||||| ||||    
T  30881315 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 30881414  T
Q  123 caagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatcaacgg 222  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||    
T  30881415 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacgg 30881514  T
Q  223 atttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  30881515 atttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 30881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 10187523 - 10187779
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  10187523 tggacatcaaaattttcacccgatcgacaaacagaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10187622  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| ||||||||| ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  10187623 caattgaatcaagtgttggagcgagtattcccttttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 10187722  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcat 270  Q
    ||||||||||||| ||||||   |||| || |||| |||||||||||||||||||||    
T  10187723 catcaacggattttttgtgtccaatatgagcaaatattcaggaatttctaccttcat 10187779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 12517367 - 12517522
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||| |||   ||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  12517367 tggacatcagaattttcaccccatcatcaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 12517466  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtca 169  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  12517467 caactgaatcaagcgttggtgcaaatattcccctttcttggaaaaatagctggtca 12517522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 49176 - 48915
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||    
T  49176 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 49077  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  49076 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 48977  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  48976 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 48915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 202; Significance: 1e-110; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 31912 - 32172
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||| ||||||| | |||| |||||||||||||||||||    
T  31912 tggacatcagaattttcacccgatctacaaacagaatcagagtttaaatactctttctcttcacctggaatcagcaacatcataaattcgttaacatgct 32011  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32012 caactgaatcaagcgttggtgcaagtat-cccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 32110  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||||    
T  32111 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 32172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 19436 - 19670
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| ||| |||||||    
T  19436 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgct 19535  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  19536 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtga 19635  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaat 248  Q
    ||||||| ||||||||||||  |||||||| ||||    
T  19636 catcaacagatttgttgtgtccgatatcagcaaat 19670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 321576 - 321315
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| | ||||| ||| || |||||||||||||||||||    
T  321576 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagcgatatcataaattcgttaacatgct 321477  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  321476 caactgaatcaagcattggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacaaaaagtctataagtga 321377  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||||||||||||||| |||  |||||||| |||||||||||||||||||||||||| ||||    
T  321376 catcaacggatttgttttgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 321315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 14 - 270
Target Start/End: Complemental strand, 812 - 556
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||| |||||| ||||||| |||||| |||||||| ||||||||||    
T  812 tggacatcagaattttcacccaatctacaaacagaatcagaggttaaatactctttcttttcacctggaatcagcgacatcataaattcattaacatgct 713  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  712 caactgaatcaagcgttggtgcgagtattcccctttattggaaaaatagctggtcaccaaggttatcatttagatcgggatacacaaagtttataagtga 613  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcat 270  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  612 catcaacgggtttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcat 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 186534 - 186794
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  186534 tggacatcagaattt-cacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 186632  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  186633 cagctgaatcaagcgttggtgcgagtattcccctttattggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 186732  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  186733 catcaacagatttgttgtgtacgatatgagcaaatcttcaggaatttctaccttcatttcac 186794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 5499 - 5239
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| | |||||  ||||| ||| |||||||||||||||    
T  5499 tggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagtgacatcatatattcgttaacatgct 5400  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  5399 caactgaatcaagcgttggtgcgagtattcccctttcttgg-aaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 5301  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||  ||||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  5300 catcaatagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 5239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1139 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold1139
Description:

Target: scaffold1139; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 983 - 1240
Alignment:
Q  18 catcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaac 117  Q
    ||||||||||||| ||||||  | ||| | ||||||||||||||||||||||||||||||  |||||||  ||||| ||| |||||||||||||||| ||    
T  983 catcagaattttcgcccgattgacaaacaaaatcagagcttaaatactctttctcttcacttggaatcagtgacatcatatattcgttaacatgctcgac 1082  T
Q  118 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatc 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  1083 tgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatc 1182  T
Q  218 aacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||  ||||| || |||||||||||||||||||||||||| ||||    
T  1183 aacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 18988 - 19241
Alignment:
Q  17 acatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaa 116  Q
    |||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||||| |||||||  ||||| ||| ||||||||||||||||||    
T  18988 acatcagaattttcactcgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaa 19087  T
Q  117 ctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacat 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||  |||||||||||||||||||||||||    
T  19088 ctgaatcaagcgttggtgcgagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtgacat 19187  T
Q  217 caacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcat 270  Q
    ||||  |||||||||||  ||||| || |||||||||| |||||||||||||||    
T  19188 caacatatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcat 19241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 18109 - 17855
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| |||||||||||||||   ||| ||||||| ||||||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||||    
T  18109 tggacatcataattttcacccgatcggcaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 18010  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    ||||| ||||||||||||||||||||||||||||||||||       ||| | ||||||||||||||||| | |||||||||||||||||||||||||||    
T  18009 caactaaatcaagcgttggtgcgagtattcccctttcttg-------agcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 17917  T
Q  214 catcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||||||||||||||||  ||||| || ||||||||||||| |||||||||||| ||||    
T  17916 catcaacggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttcac 17855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 134; Significance: 8e-70; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 182794 - 183051
Alignment:
Q  18 catcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgctcaac 117  Q
    ||||||| ||||| ||||||| | |||  |||||||||||||||||||||||||||||||  |||||||  ||||| ||| |||||||||||||||||||    
T  182794 catcagatttttcgcccgatcgacaaactgaatcagagcttaaatactctttctcttcacttggaatcactgacatcatatattcgttaacatgctcaac 182893  T
Q  118 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgacatc 217  Q
     ||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||| | ||||||| | ||||||||| ||||||||||| |||||||||    
T  182894 cgaatcaagcgttggtgcgagtattcccttttcttggaaaaagagtgggtcaccaatgatatcattcaaatcgggatatacaaagtctattagtgacatc 182993  T
Q  218 aacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    |||| ||||||||| |  ||||| || |||||||| ||||||||||||||||| ||||    
T  182994 aacgaatttgttgtatcggatatgagcaaatcttcgggaatttctaccttcatttcac 183051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 16 - 275
Target Start/End: Original strand, 165511 - 165771
Alignment:
Q  16 gacatcagaattttcacccgatctaaaaatagaatcagagcttaaatac-tctttctcttcacccggaatcaacgacatgataaattcgttaacatgctc 114  Q
    ||||||||| ||||| ||||||| | |||  ||||||||||||||| |  |||||||||||||| |||||||  ||||| ||| ||||||||||||||||    
T  165511 gacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctc 165610  T
Q  115 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtgac 214  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||| | ||||||||| ||||||||||| ||||||    
T  165611 aaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgac 165710  T
Q  215 atcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctaccttcatctcac 275  Q
    ||||||| ||||||||| |  ||||| ||||||||||| ||||||||  ||||||| ||||    
T  165711 atcaacgaatttgttgtatcggatatgagtaaatcttcgggaatttcccccttcatttcac 165771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 233
Target Start/End: Original strand, 16663 - 16882
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||||||||||| | ||||  ||||| ||||||| |||||||| ||||||||||||||||  ||||||  || || ||| || ||||||||| ||    
T  16663 tggacatcagaattttcgctcgattgaaaaacagaatcatagcttaaaaactctttctcttcacctagaatcagtgaaatcatatatgcgttaacatact 16762  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattaagatcgggatacacaaagtctataagtga 213  Q
    | ||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  16763 ccactaaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaagttatcattcaaatcgggatacacaaagtctataagtga 16862  T
Q  214 catcaacggatttgttgtgt 233  Q
    ||||||||||||||||||||    
T  16863 catcaacggatttgttgtgt 16882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 28874 - 28727
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||| | | | ||| |||||||||| ||||||||| |||||||||||| |||||||  ||||| ||| ||||||||||||| |    
T  28874 tggacatcaaaattttcacccaagcgacaaacagaatcagagtttaaatactttttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 28775  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28774 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 28727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 142 - 24
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatcaacgacatgataaattcgttaacatgct 113  Q
    |||| |||||||||||||||||||| | | | | |||||||||||||||||||||||||  |||| | |||||  |||||  || |||||||||||||||    
T  142 tggaaatcagaattttcacccgatcgacatacaaaatcagagcttaaatactctttctcgccacctgaaatcagtgacatcgtatattcgttaacatgct 43  T
Q  114 caactgaatcaagcgttgg 132  Q
    |||||||||||||| ||||    
T  42 caactgaatcaagccttgg 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1424
Description:

Target: scaffold1424; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 1627 - 1699
Alignment:
Q  14 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacccggaatca 86  Q
    ||||||||| ||||||||||||||| | ||| | |||||||| |||||||| ||||||||||||| |||||||    
T  1627 tggacatcaaaattttcacccgatcgataaacataatcagagtttaaatacgctttctcttcacctggaatca 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 39937 - 39988
Alignment:
Q  216 tcaacggatttgttgtgtttgatatcagtaaatcttcaggaatttctacctt 267  Q
    ||||||||||||||||||  |||||||| ||||||||| |||||||||||||    
T  39937 tcaacggatttgttgtgtccgatatcagcaaatcttcaagaatttctacctt 39988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University