View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11121_high_56 (Length: 280)
Name: NF11121_high_56
Description: NF11121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11121_high_56 |
 |  |
|
| [»] chr4 (2 HSPs) |
 |  |
|
| [»] chr3 (1 HSPs) |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 139; Significance: 9e-73; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 37412643 - 37412501
Alignment:
| Q |
18 |
atcacatgctttaagcgataactggttgagagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtacctt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37412643 |
atcacatgctttaagcgataactggttgagagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtacctt |
37412544 |
T |
 |
| Q |
118 |
agaggagtgctccagttgaacattggaagttttccaataaggt |
160 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37412543 |
agaggagtgctccagttgaacattggaagttttacaataaggt |
37412501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 50 - 280
Target Start/End: Original strand, 37697612 - 37697842
Alignment:
| Q |
50 |
acttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaagttt |
149 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
37697612 |
acttcaattgacctatggaataaggaatttcacctgagaaagcagtgtaagagaggtctaagtaccttagaggagtgctccagttggactttggaagttg |
37697711 |
T |
 |
| Q |
150 |
tccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccctaga |
249 |
Q |
| |
|
||| |||||| | |||| |||||||||| | | ||||||||||||||||||| | | |||||||| || |||||||||||| |||||| | |||| |
|
|
| T |
37697712 |
accactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttcgtaga |
37697811 |
T |
 |
| Q |
250 |
ctaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| |
|
|
| T |
37697812 |
ctaagagaaaccaaagaggatgacaaattct |
37697842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 46 - 280
Target Start/End: Original strand, 37824716 - 37824950
Alignment:
| Q |
46 |
agagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaa |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
37824716 |
agagacttcaattgacctatggaataaggaatttcacctgaaaaagcagaggaagagaggtccaagtaccttagaggagtgctccagttggactttggaa |
37824815 |
T |
 |
| Q |
146 |
gttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccc |
245 |
Q |
| |
|
||| ||| |||||| | |||| |||||||||| | | ||||||||||||||||||| | | |||||||| || |||||||||||| |||||| | |
|
|
| T |
37824816 |
gttgaccactaaggttatgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtttcg |
37824915 |
T |
 |
| Q |
246 |
tagactaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| |
|
|
| T |
37824916 |
tagactaagagaaaccaaagaggatgacaaattct |
37824950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 46 - 280
Target Start/End: Original strand, 37533921 - 37534155
Alignment:
| Q |
46 |
agagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaa |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
37533921 |
agagacttcaattgacctatggaataaggaatttcacctgaaaaagcagagaaagagaggaccaagtaccttagaggagtgctccagttggactttggaa |
37534020 |
T |
 |
| Q |
146 |
gttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccc |
245 |
Q |
| |
|
||| ||| |||||| ||||||||||||||||| | | ||||||||||||||||||| | | |||||||| |||||||||||||| ||| | |
|
|
| T |
37534021 |
gttgaccactaaggttatcattagatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactcagtttctga |
37534120 |
T |
 |
| Q |
246 |
tagactaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| |
|
|
| T |
37534121 |
tagactaagagaaaccaaagaggatgacaaattct |
37534155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 46 - 280
Target Start/End: Original strand, 37640693 - 37640927
Alignment:
| Q |
46 |
agagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaa |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||| | |||||||||||||||||||||||||||| || |||||| |
|
|
| T |
37640693 |
agagacttcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggttcaagtaccttagaggagtgctccagttggactttggaa |
37640792 |
T |
 |
| Q |
146 |
gttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccc |
245 |
Q |
| |
|
||| ||| |||||| | |||| |||||||||| | | ||||||||||||||||||| | | |||||||| |||||||||||||| ||| || | |
|
|
| T |
37640793 |
gttgaccactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactcagtttttcg |
37640892 |
T |
 |
| Q |
246 |
tagactaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| |
|
|
| T |
37640893 |
tagactaagagaaaccaaagaggatgacaaattct |
37640927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 46 - 280
Target Start/End: Original strand, 37712445 - 37712679
Alignment:
| Q |
46 |
agagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaa |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
37712445 |
agagacttcaattgacctatggaataaggaatttcacctgaaaaagcagaggaagagaggaccaagtaccttagaggagtgctccagttggactttggaa |
37712544 |
T |
 |
| Q |
146 |
gttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccc |
245 |
Q |
| |
|
||| ||| |||||| | |||| |||||||||| | | ||||||||||||||||||| | | |||||||| || |||||||||||| ||||| | |
|
|
| T |
37712545 |
gttgaccactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgatatatttccttgcaacacagtgtctcg |
37712644 |
T |
 |
| Q |
246 |
tagactaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| |
|
|
| T |
37712645 |
tagactaagagaaaccaaagaggatgacaaattct |
37712679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 279
Target Start/End: Original strand, 37436528 - 37436761
Alignment:
| Q |
46 |
agagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaa |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||| | |||||||||||||||||||||||||||| || |||||| |
|
|
| T |
37436528 |
agagacttcaattgacctatggaataaggaatttcacctgagaaagcagataaacggaggttcaagtaccttagaggagtgctccagttggactttggaa |
37436627 |
T |
 |
| Q |
146 |
gttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccc |
245 |
Q |
| |
|
||| ||| |||||| | |||| |||||||||| | | ||||||||||||||||||| | | |||||||| |||||||||||||| |||| | |
|
|
| T |
37436628 |
gttgaccactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactgagtggatgc |
37436727 |
T |
 |
| Q |
246 |
tagactaagagagaccagagaggatgacaaattc |
279 |
Q |
| |
|
|||||||||||| |||| ||| |||||||||||| |
|
|
| T |
37436728 |
tagactaagagaaaccaaagaagatgacaaattc |
37436761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 50 - 280
Target Start/End: Original strand, 37595149 - 37595379
Alignment:
| Q |
50 |
acttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaagttt |
149 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||| || |||| ||| | |||||||||||||||||||||| ||||| || ||||||||| |
|
|
| T |
37595149 |
acttcaattgacctatggaataaggaatttcacctgaaaaagcagataaacggaggttcaagtaccttagaggagtgctcaagttggactttggaagttg |
37595248 |
T |
 |
| Q |
150 |
tccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccctaga |
249 |
Q |
| |
|
||| |||||| |||||| |||||||||| | | ||||||||||||||||||| | | |||||||| |||||||||||||| | |||||| | |||| |
|
|
| T |
37595249 |
accactaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaacccagtgtttcgtaga |
37595348 |
T |
 |
| Q |
250 |
ctaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||| |||| ||||||||| ||||||| |
|
|
| T |
37595349 |
agaagagaaaccaaagaggatgaaaaattct |
37595379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 37412504 - 37412419
Alignment:
| Q |
195 |
aggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccctagactaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37412504 |
aggtaaagagggaatgtcacttgctaaatttccttgcaaactagtgttccctagactaagagagaccagagaggatgacaaattct |
37412419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 280
Target Start/End: Complemental strand, 37400147 - 37399917
Alignment:
| Q |
50 |
acttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaagttt |
149 |
Q |
| |
|
||||||| || ||||||||||| |||||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
37400147 |
acttcaattggcctatggaatagggaatttcacctgaaaaagcagaggaagagaggaccaagtaccttagaggagtgctccagttggactttggaagttg |
37400048 |
T |
 |
| Q |
150 |
tccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccctaga |
249 |
Q |
| |
|
||| |||||| | |||| |||||||||| | | ||||||||||||||||||| | | |||||||| |||||||||||||| ||| | |||| |
|
|
| T |
37400047 |
accactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactcagtttctgataga |
37399948 |
T |
 |
| Q |
250 |
ctaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| |
|
|
| T |
37399947 |
ctaagagaaaccaaagaggatgacaaattct |
37399917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 280
Target Start/End: Complemental strand, 37381674 - 37381440
Alignment:
| Q |
46 |
agagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaa |
145 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| || |||||| ||||||||||| | |||||||||||||||| | | |||| |
|
|
| T |
37381674 |
agagacttcaactggcctatggaataaggaatttcacctgagaaaggggtgcgagagaggtccaagtacctcaaaggagtgctccagttggatttcggaa |
37381575 |
T |
 |
| Q |
146 |
gttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccc |
245 |
Q |
| |
|
||| | | || | | ||||||||| ||||||||| ||| ||||||||||||||| | | |||||||| |||||||||||||| | ||| | || |
|
|
| T |
37381574 |
gttgactgctcagatatttattagatgataaatctagtgtttggagattaggtaaagagaggatgtcacttgacaaatttccttgcaacccagtttctcc |
37381475 |
T |
 |
| Q |
246 |
tagactaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
||||| |||||| |||| ||||||||||||||||| |
|
|
| T |
37381474 |
tagaccaagagaaaccaaagaggatgacaaattct |
37381440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 280
Target Start/End: Original strand, 37703489 - 37703723
Alignment:
| Q |
46 |
agagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaa |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||| | |||||| |||||||||| |||||||||| | |||||| |
|
|
| T |
37703489 |
agagacttcaattgacctatggaataaggaatttcacctgaaaaagcagaggaagagaggttcaagtatcttagaggagagctccagttggattttggaa |
37703588 |
T |
 |
| Q |
146 |
gttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccc |
245 |
Q |
| |
|
||| ||| |||||| | ||| |||||||||| | | ||||||||||||||||||| | | |||||||| |||||||||||||| ||| | |
|
|
| T |
37703589 |
gttgaccactaaggttataattgaatgacaaatccaatctttgaagattaggtaaagagaggatgtcacttgacaaatttccttgcaactcagtttctga |
37703688 |
T |
 |
| Q |
246 |
tagactaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| |
|
|
| T |
37703689 |
tagactaagagaaaccaaagaggatgacaaattct |
37703723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 37429616 - 37429720
Alignment:
| Q |
100 |
gagagatccaagtaccttagaggagtgctccagttgaacattggaagttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggta |
199 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||| ||| ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||| |||| |
|
|
| T |
37429616 |
gagaggtccaagtaccttaggggagtgctccagttggacagtggaagtttcccactaaggtcctcattaaaagacaaatctagttcttgaagatttggta |
37429715 |
T |
 |
| Q |
200 |
aagag |
204 |
Q |
| |
|
||||| |
|
|
| T |
37429716 |
aagag |
37429720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 37392237 - 37392066
Alignment:
| Q |
106 |
tccaagtaccttagaggagtgctccagttgaacattggaagttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagg |
205 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||| || |||| || | ||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
37392237 |
tccaagtaccttagaggagtgctccagtttgattttggaagtttaccgctaagttcattatt---tgacaaatctagtctttgaagattaggtaaagaga |
37392141 |
T |
 |
| Q |
206 |
gaacgtcacttgctaaatttccttgcaaactagtgttccctagactaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
| | | |||||| |||||||||||||| | | | | ||||| |||||||| |||| ||||||||||| ||||| |
|
|
| T |
37392140 |
ggatggcacttgacaaatttccttgcaacccaatttctcctagcctaagagaaaccaaagaggatgacacattct |
37392066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 50 - 280
Target Start/End: Complemental strand, 24217075 - 24216845
Alignment:
| Q |
50 |
acttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaagttt |
149 |
Q |
| |
|
||||||||||||| || || || | |||||||||||||||| || |||||||| |||||||||||||| ||||||||||||||| || |||||| ||| |
|
|
| T |
24217075 |
acttcaactgaccaatagagtatgaaatttcacctgagaaaccagagaaagagaggtccaagtaccttaggggagtgctccagttggacgttggaaattt |
24216976 |
T |
 |
| Q |
150 |
tccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccctaga |
249 |
Q |
| |
|
||| |||||| | ||| |||||||||||||||| ||||||||| ||||||||| | | |||||||| | |||||||||||| | |||| ||||| |
|
|
| T |
24216975 |
accacgaaggtcttgattcgatgacaaatctagtttttgaagatttggtaaagagaggatgtcacttgacatatttccttgcaatccagtggatgctaga |
24216876 |
T |
 |
| Q |
250 |
ctaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| |
|
|
| T |
24216875 |
ctaagagaaaccaaagaggatgacaaattct |
24216845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 278
Target Start/End: Complemental strand, 16842215 - 16841983
Alignment:
| Q |
46 |
agagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaa |
145 |
Q |
| |
|
|||||||| || |||||||||||||| | ||||| ||||||||| ||| |||||| | |||||||||||||||||||||||||||| | |||||| |
|
|
| T |
16842215 |
agagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagagaggtacaagtaccttagaggagtgctccagttggattttggaa |
16842116 |
T |
 |
| Q |
146 |
gttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccc |
245 |
Q |
| |
|
||| ||| ||||||| | |||| ||||||||||||| ||||||||| | |||||| | | ||||||| |||||||||||||||| |||||| | |
|
|
| T |
16842115 |
gttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaagagagtatgtcacttaacaaatttccttgcaaaccagtgtttgc |
16842016 |
T |
 |
| Q |
246 |
tagactaagagagaccagagaggatgacaaatt |
278 |
Q |
| |
|
|||| |||||| |||| ||||||||||||||| |
|
|
| T |
16842015 |
tagatgaagagaaaccaaagaggatgacaaatt |
16841983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 46 - 280
Target Start/End: Original strand, 14553859 - 14554093
Alignment:
| Q |
46 |
agagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagtaccttagaggagtgctccagttgaacattggaa |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| || || ||| | |||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
14553859 |
agagacttcaattgacctatggaataaggaatttcacctgagaaagcagagtaatggaggtacaagtaccttagaggagtactccagttggattttggaa |
14553958 |
T |
 |
| Q |
146 |
gttttccaataaggtcctcattagatgacaaatctagttcttgaagattaggtaaagagggaacgtcacttgctaaatttccttgcaaactagtgttccc |
245 |
Q |
| |
|
||| ||| |||| | |||||| | ||||||||||| ||||||||| || |||||| | | |||||||| |||||||||||||| | ||||| | |
|
|
| T |
14553959 |
gttgaccactaagaccatcattacctaccaaatctagtttttgaagatttggcaaagagagtatgtcacttgacaaatttccttgcaacccggtgtttgc |
14554058 |
T |
 |
| Q |
246 |
tagactaagagagaccagagaggatgacaaattct |
280 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||| |
|
|
| T |
14554059 |
tagactaagagaaaccaaagaggatgacaaattct |
14554093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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