View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11121_high_92 (Length: 221)
Name: NF11121_high_92
Description: NF11121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11121_high_92 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 45307731 - 45307924
Alignment:
| Q |
17 |
agttacctcattaattccataatcaaatttagcattgaggcacatgtttgcatcttcatcttgttccaattttgaaaacataccttttctgcttgtttcg |
116 |
Q |
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| T |
45307731 |
agttacctcattaattccataatcaaatttagcattgaggcacatgtttgcatcttcatcttgttccaattttgaaaacataccttttctgcttgtttcg |
45307830 |
T |
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| Q |
117 |
aggacattcattcttataatgtcatagcttatcacattcataggacatgacttgactcttgccatcnnnnnnngaaaacataccttctctgctt |
210 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
45307831 |
aggacattcattcttacaatgtcatagcttatcacattcataggacatgacttgactcttgccatctctttttgaaaacataccttctctgctt |
45307924 |
T |
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