View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11121_low_100 (Length: 205)
Name: NF11121_low_100
Description: NF11121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11121_low_100 |
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Alignment Details
Target: chr6 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18049090 - 18048928
Alignment:
| Q |
1 |
atatatgtgataaagtacaaattttacccaccattattgtaaaatggtcattttaataattaatattttaccattcctcaaatttttatttaaaaggtga |
100 |
Q |
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| T |
18049090 |
atatatgtgataaagtacaaattttacccaccattattttaaaatggtcattttaataattaatattttaccattccccaaatttttatttaacaggtga |
18048991 |
T |
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| Q |
101 |
catatagatagacttttattacatttgtgcacgtagttattttattgtttctatatatttact |
163 |
Q |
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| T |
18048990 |
catatagatagacttttattacatttgtgcacgtagttattttattgtttctatatatttact |
18048928 |
T |
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Target: chr8 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 9227257 - 9227288
Alignment:
| Q |
173 |
cattttttcttagagaaatgatatttgtacaa |
204 |
Q |
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| T |
9227257 |
cattttttcttagagaaatgatatttgtacaa |
9227288 |
T |
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