View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11121_low_15 (Length: 491)

Name: NF11121_low_15
Description: NF11121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11121_low_15
NF11121_low_15
[»] chr2 (25 HSPs)
chr2 (1-475)||(12266988-12267464)
chr2 (350-439)||(735993-736082)
chr2 (350-430)||(4026963-4027043)
chr2 (355-438)||(13839760-13839843)
chr2 (350-436)||(33321280-33321366)
chr2 (352-438)||(39070843-39070929)
chr2 (350-439)||(11777013-11777102)
chr2 (350-439)||(36501483-36501572)
chr2 (350-439)||(38216048-38216137)
chr2 (350-430)||(8832495-8832575)
chr2 (350-436)||(38471759-38471845)
chr2 (363-439)||(12223881-12223957)
chr2 (353-437)||(39592280-39592364)
chr2 (350-416)||(2401590-2401656)
chr2 (355-409)||(10988220-10988274)
chr2 (350-416)||(17546476-17546542)
chr2 (350-416)||(22898325-22898391)
chr2 (350-424)||(37409687-37409761)
chr2 (350-439)||(887441-887530)
chr2 (350-387)||(23756408-23756445)
chr2 (362-415)||(30995880-30995933)
chr2 (350-430)||(9140698-9140778)
chr2 (350-438)||(16108090-16108178)
chr2 (350-418)||(23956232-23956300)
chr2 (353-389)||(38010643-38010679)
[»] chr1 (31 HSPs)
chr1 (350-439)||(47413401-47413490)
chr1 (350-439)||(46500968-46501058)
chr1 (352-475)||(50919480-50919603)
chr1 (350-439)||(3069822-3069911)
chr1 (350-439)||(6337724-6337813)
chr1 (350-439)||(41196678-41196767)
chr1 (350-435)||(41576363-41576448)
chr1 (350-439)||(48819328-48819417)
chr1 (352-439)||(15515317-15515404)
chr1 (360-438)||(49971281-49971360)
chr1 (350-439)||(41003416-41003505)
chr1 (350-439)||(37329380-37329469)
chr1 (350-416)||(14461009-14461075)
chr1 (350-436)||(26988180-26988266)
chr1 (350-439)||(28690033-28690122)
chr1 (350-438)||(35282562-35282650)
chr1 (350-438)||(42591412-42591500)
chr1 (355-438)||(31378724-31378807)
chr1 (350-439)||(4068144-4068233)
chr1 (350-439)||(16888934-16889022)
chr1 (350-439)||(22593375-22593464)
chr1 (352-439)||(1005369-1005456)
chr1 (352-430)||(35590168-35590246)
chr1 (350-439)||(45267494-45267584)
chr1 (350-411)||(19395831-19395892)
chr1 (350-435)||(37712100-37712185)
chr1 (350-438)||(9572752-9572840)
chr1 (402-438)||(12256637-12256673)
chr1 (350-406)||(12871443-12871499)
chr1 (351-439)||(26435144-26435232)
chr1 (355-439)||(26543002-26543086)
[»] chr5 (30 HSPs)
chr5 (350-436)||(27805947-27806033)
chr5 (350-439)||(28357170-28357259)
chr5 (350-439)||(43319032-43319121)
chr5 (350-438)||(41419531-41419619)
chr5 (350-439)||(28625509-28625598)
chr5 (350-438)||(2878645-2878732)
chr5 (350-439)||(38461248-38461339)
chr5 (350-438)||(13625488-13625577)
chr5 (350-439)||(29659089-29659178)
chr5 (350-437)||(40452445-40452533)
chr5 (350-436)||(19840058-19840144)
chr5 (350-439)||(11991334-11991422)
chr5 (350-439)||(13060570-13060659)
chr5 (350-439)||(17657271-17657360)
chr5 (350-439)||(23087747-23087836)
chr5 (350-439)||(24030244-24030332)
chr5 (350-391)||(38498645-38498686)
chr5 (353-430)||(39154732-39154809)
chr5 (350-430)||(1576668-1576748)
chr5 (350-430)||(1608067-1608147)
chr5 (350-430)||(6144776-6144856)
chr5 (356-439)||(12467293-12467377)
chr5 (356-439)||(12986988-12987071)
chr5 (350-439)||(40697030-40697124)
chr5 (350-392)||(43268604-43268646)
chr5 (350-439)||(1868875-1868964)
chr5 (350-439)||(28357381-28357470)
chr5 (350-439)||(29418720-29418809)
chr5 (350-439)||(29922157-29922246)
chr5 (379-439)||(41534652-41534712)
[»] chr4 (37 HSPs)
chr4 (352-438)||(8601231-8601317)
chr4 (352-432)||(2405223-2405303)
chr4 (350-439)||(488352-488441)
chr4 (350-439)||(896999-897088)
chr4 (350-416)||(42617198-42617264)
chr4 (350-439)||(10046261-10046350)
chr4 (350-439)||(17222858-17222947)
chr4 (350-439)||(36255004-36255093)
chr4 (350-439)||(19725322-19725411)
chr4 (350-439)||(23335671-23335760)
chr4 (350-439)||(29877668-29877757)
chr4 (350-439)||(35010240-35010329)
chr4 (350-418)||(9319098-9319166)
chr4 (350-438)||(46704238-46704326)
chr4 (352-418)||(4398176-4398242)
chr4 (350-416)||(15184598-15184664)
chr4 (350-416)||(22273832-22273898)
chr4 (350-436)||(32628810-32628896)
chr4 (350-439)||(52700511-52700601)
chr4 (350-439)||(28074394-28074482)
chr4 (350-438)||(825712-825800)
chr4 (386-438)||(2494404-2494456)
chr4 (350-439)||(12495612-12495703)
chr4 (379-439)||(21216325-21216385)
chr4 (354-438)||(48591396-48591480)
chr4 (350-439)||(11679095-11679184)
chr4 (350-439)||(11687374-11687463)
chr4 (350-416)||(38345790-38345856)
chr4 (350-439)||(43415256-43415346)
chr4 (350-408)||(48721880-48721938)
chr4 (350-439)||(18424246-18424334)
chr4 (353-430)||(36740942-36741019)
chr4 (362-439)||(39932734-39932811)
chr4 (350-439)||(42611837-42611924)
chr4 (350-439)||(55638049-55638138)
chr4 (350-438)||(41228933-41229021)
chr4 (371-436)||(43699470-43699537)
[»] chr7 (18 HSPs)
chr7 (355-431)||(18855243-18855319)
chr7 (350-439)||(14691267-14691356)
chr7 (358-438)||(43391751-43391831)
chr7 (349-439)||(23119887-23119977)
chr7 (350-439)||(22032791-22032880)
chr7 (350-439)||(47654382-47654471)
chr7 (350-438)||(8180559-8180647)
chr7 (350-416)||(14675928-14675994)
chr7 (354-431)||(16012735-16012812)
chr7 (350-439)||(20888603-20888692)
chr7 (354-439)||(29378674-29378759)
chr7 (350-439)||(30181579-30181668)
chr7 (350-438)||(48021616-48021703)
chr7 (350-416)||(23137131-23137197)
chr7 (350-384)||(27811429-27811463)
chr7 (350-439)||(43818846-43818936)
chr7 (350-438)||(38654137-38654224)
chr7 (350-438)||(44613441-44613529)
[»] chr6 (18 HSPs)
chr6 (350-437)||(21610017-21610104)
chr6 (350-437)||(8014819-8014906)
chr6 (359-411)||(715888-715940)
chr6 (350-414)||(9202367-9202431)
chr6 (350-438)||(10874014-10874102)
chr6 (398-439)||(5958357-5958398)
chr6 (350-439)||(34509941-34510029)
chr6 (353-435)||(13429488-13429571)
chr6 (350-413)||(32675857-32675920)
chr6 (350-416)||(32165229-32165295)
chr6 (350-439)||(2255763-2255852)
chr6 (350-414)||(2027144-2027208)
chr6 (379-439)||(2034226-2034286)
chr6 (351-439)||(16589780-16589868)
chr6 (351-439)||(16605512-16605600)
chr6 (350-438)||(21891306-21891394)
chr6 (350-438)||(29623445-29623533)
chr6 (359-439)||(34413348-34413428)
[»] chr3 (24 HSPs)
chr3 (356-439)||(10521183-10521266)
chr3 (356-439)||(10667427-10667510)
chr3 (350-416)||(37778185-37778251)
chr3 (350-439)||(42956147-42956236)
chr3 (350-439)||(37243495-37243584)
chr3 (350-439)||(53218008-53218097)
chr3 (379-439)||(10448803-10448863)
chr3 (388-438)||(27769675-27769725)
chr3 (373-439)||(52421132-52421198)
chr3 (350-439)||(28741182-28741271)
chr3 (350-439)||(34707681-34707770)
chr3 (350-438)||(36182533-36182622)
chr3 (350-406)||(35583688-35583744)
chr3 (350-439)||(40581044-40581134)
chr3 (354-436)||(43079906-43079988)
chr3 (362-439)||(52021275-52021353)
chr3 (350-439)||(1516066-1516155)
chr3 (355-416)||(29614245-29614306)
chr3 (350-439)||(40240545-40240634)
chr3 (350-439)||(53787720-53787809)
chr3 (378-438)||(20365431-20365491)
chr3 (350-438)||(22809161-22809249)
chr3 (351-391)||(24521184-24521224)
chr3 (355-415)||(30321702-30321762)
[»] chr8 (19 HSPs)
chr8 (350-438)||(24350487-24350575)
chr8 (350-438)||(38895689-38895777)
chr8 (350-439)||(10298894-10298983)
chr8 (350-436)||(32924181-32924266)
chr8 (350-416)||(38338819-38338885)
chr8 (350-439)||(9131096-9131185)
chr8 (350-439)||(4326180-4326270)
chr8 (350-438)||(24087200-24087289)
chr8 (350-439)||(24866919-24867008)
chr8 (350-439)||(28280738-28280827)
chr8 (350-438)||(32975717-32975805)
chr8 (379-439)||(35168438-35168498)
chr8 (352-430)||(14709507-14709584)
chr8 (354-436)||(35285960-35286042)
chr8 (350-416)||(42363285-42363351)
chr8 (350-439)||(2563387-2563476)
chr8 (350-439)||(14942453-14942542)
chr8 (350-439)||(19327896-19327984)
chr8 (350-407)||(29218219-29218276)
[»] scaffold0048 (1 HSPs)
scaffold0048 (350-439)||(58836-58925)
[»] scaffold0512 (1 HSPs)
scaffold0512 (350-439)||(4094-4182)
[»] scaffold0157 (1 HSPs)
scaffold0157 (350-439)||(24774-24865)
[»] scaffold0057 (1 HSPs)
scaffold0057 (350-439)||(24357-24446)


Alignment Details
Target: chr2 (Bit Score: 393; Significance: 0; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 1 - 475
Target Start/End: Complemental strand, 12267464 - 12266988
Alignment:
Q  1 gtaacggaaatgataggtgattaagaggtgccaacataattggaatgtcttggtttattatgtactgtctttgcactcatttttgttttaaaagataaaa 100  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12267464 gtaacggaaatgatagatgattaagaggtggcaacataattggaatgtcttggtttattatgtactgtctttgcactcatttttgttttaaaaaataaaa 12267365  T
Q  101 agaaaaattatatatcctaagtcaccagattgggtcgacggggtcacaagtgcaaaaacctaaatccaaagatggaaccgatctcctatggttttatcga 200  Q
    ||||||||||||||||| | |||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12267364 agaaaaattatatatcccacgtcaccggattgggtcaacgtggtcacaagtgcaaaaacctaaatccaaagatggaaccgatctcctatggttttatcga 12267265  T
Q  201 gttgggctgaattctacccataagtgaacgggttagggtaacagattgagtcactttaggtcgtcaggttggtgggttgacccatacatgtgaacacgtc 300  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  12267264 gttgggctgaattgtacccataagtgaacgggttagggtaacagattgagtcactttaggtcgtcaggttcctgggttgacccatacatgtgaacacgtc 12267165  T
Q  301 aacttgcttatctaatttggggtaatatcggacagagtgaaatggaatcttatgttaatttataagttttcactaataaaaattatatcttcgtaaccta 400  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12267164 aacttgcttatctaatttggggtaatatcggagagagtgaaatggaatcttatgttaatttataagttttcactaataaaaattatatcttcataaccta 12267065  T
Q  401 ttttttcataaactacatcgacaagcttataaataatac--nnnnnnntcatttatttgcttaaactattttatata 475  Q
    |||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||    
T  12267064 ttttttcataaactacatcgacaagcttataaataatacaaaaaaaaatcatttatttgcttaaactattttatata 12266988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 736082 - 735993
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||| ||| |||||||||||||||| || |  |||||||||||||||||||    
T  736082 ttatgttaatttataagttctcaataacaaaaattatatcttcataaactattttttcataaaccaccttaacaagcttataaataatac 735993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 4027043 - 4026963
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    ||||||||||| ||||||| ||||||| ||||||| ||||||| ||| || |||||||||||||||| | |||||||||||    
T  4027043 ttatgttaattcataagttctcactaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttat 4026963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 438
Target Start/End: Original strand, 13839760 - 13839843
Alignment:
Q  355 ttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||||||||| ||||| | ||| ||||||||||||||| ||||   ||||||||||||||||||| | || |||||||||||||    
T  13839760 ttaatttatatgttttaattaacaaaaattatatcttcataactagttttttcataaactacatcaataaacttataaataata 13839843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 33321280 - 33321366
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataa 436  Q
    ||||||||||| | ||| | ||||||| ||||||| ||||||| ||| || |||||||||||||||| | ||||||||||| |||||    
T  33321280 ttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataa 33321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 438
Target Start/End: Complemental strand, 39070929 - 39070843
Alignment:
Q  352 atgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||| ||||||||||||||| ||||||||||| ||  |||  |||||||||||||||||  |  | ||||||||||||||||    
T  39070929 atgttaattcataagttttcactaacaaaaattatatttttataagatattttttcataaactatcttaaaaagcttataaataata 39070843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 11777102 - 11777013
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||| |||||||||| ||||||| ||||| | ||||||| ||| || | |||||||||||||  |  |||||||||||||||||||    
T  11777102 ttatgttagtttataagttctcactaacaaaaagtgtatcttcataagctgtgttttcataaactaacttaacaagcttataaataatac 11777013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 36501483 - 36501572
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| || |||| |||||||   ||||| ||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||    
T  36501483 ttatgttaattcatgagttctcactaacgcaaattttatcttcataagctgttttttcataaactaccttgacaagcttatgaataatac 36501572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 38216137 - 38216048
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||| | ||||||| |||||||  |||||| ||||||| ||  |||||||||| |||||||| | ||||||||||| ||||||||    
T  38216137 ttatgttaactcataagttctcactaacgaaaattgtatcttcatatgctattttttcctaaactaccttgacaagcttatgaataatac 38216048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 8832575 - 8832495
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    ||||||||||| |||||||||||||||  |||||| ||||||  |||||| | |||||||||||||| | || ||||||||    
T  8832575 ttatgttaattcataagttttcactaacgaaaattgtatctttctaacctgtgttttcataaactaccttgaaaagcttat 8832495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 38471759 - 38471845
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataa 436  Q
    |||| |||||| ||||||| |||||||  |||||| || |||| ||| || ||||||||||||||||||| | ||||||||| ||||    
T  38471759 ttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttcataaactacatcaagaagcttatacataa 38471845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 439
Target Start/End: Complemental strand, 12223957 - 12223881
Alignment:
Q  363 taagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||| |||||||| |||||  ||||||| ||| || |||||||||||||||| | |||| |||||| ||||||||    
T  12223957 taagttctcactaatgaaaatggtatcttcataaactgttttttcataaactaccttgacaggcttatgaataatac 12223881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 437
Target Start/End: Complemental strand, 39592364 - 39592280
Alignment:
Q  353 tgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataat 437  Q
    |||| ||| |||| || |||||||  |||||||||||||| ||| || | |||||||||||||| | ||||||||||| ||||||    
T  39592364 tgtttattcataaattctcactaaagaaaattatatcttcttaagctttattttcataaactaccttgacaagcttatgaataat 39592280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 2401590 - 2401656
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| ||||| |||||||| | ||||| ||||||| ||| ||| ||||| |||||||||||||||||    
T  2401590 ttattttaatctataagttctgactaacaaaaattgtattttcataacccattttttcataaactac 2401656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 10988274 - 10988220
Alignment:
Q  355 ttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcat 409  Q
    ||||||| |||||||||| |||| |||||||||||||| |||  |||||||||||    
T  10988274 ttaatttttaagttttcattaatgaaaattatatcttcataaaatattttttcat 10988220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 17546542 - 17546476
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||||||| ||||||||||||||||||  ||||| |||| ||| |||  | ||||||||||||||||    
T  17546542 ttatgttagtttataagttttcactaacgaaaatgatatattcataagttgttttttcataaactac 17546476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 22898325 - 22898391
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| ||||| |||||||||| |||||  |||||| ||| ||| ||||| |||||||||||||||||    
T  22898325 ttattttaatctataagttttgactaacgaaaattgtattttcataacccattttttcataaactac 22898391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 424
Target Start/End: Complemental strand, 37409761 - 37409687
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaa 424  Q
    ||||||||||||  ||||||||| ||| ||||||| ||| ||| |||  | |||||||||||||||||| |||||    
T  37409761 ttatgttaatttcgaagttttcaataacaaaaattgtattttcataaattgttttttcataaactacattgacaa 37409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 887530 - 887441
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| |  ||||| |||||| ||||||| ||| |   |||| |||||||||| | ||||||||||| ||||||||    
T  887530 ttatgttaattcataagttcttgctaatgaaaattgtatcttcataagcaggttttacataaactaccttgacaagcttatgaataatac 887441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 23756445 - 23756408
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattata 387  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  23756445 ttatgttaatttataagttttcattaacaaaaattata 23756408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 30995880 - 30995933
Alignment:
Q  362 ataagttttcactaataaaaattatatcttcgtaacctattttttcataaacta 415  Q
    ||||||||| ||||| |||||| |||| ||| ||| ||||||||||||||||||    
T  30995880 ataagtttttactaacaaaaatcatatattcataagctattttttcataaacta 30995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 430
Target Start/End: Original strand, 9140698 - 9140778
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    |||||||||||||| ||||||||  ||  |||| || |||||| ||| || ||||| |||||||||||| |||||| ||||    
T  9140698 ttatgttaatttatgagttttcatcaacgaaaagtacatcttcataaactgtttttacataaactacattgacaagtttat 9140778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 16108090 - 16108178
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||| ||||| ||| | ||| ||||||| ||| ||| |||  | |||||||||||||||| |  |||| |||||||||||||    
T  16108090 ttatgttaattcataagatttaattaacaaaaattgtatattcataagttgttttttcataaactaccttaacaaacttataaataata 16108178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 23956232 - 23956300
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacat 418  Q
    ||||||||||||||||||| ||| |||  |||||| ||||||  ||| || ||||| ||||||||||||    
T  23956232 ttatgttaatttataagttctcattaacgaaaattgtatctttataaactgtttttccataaactacat 23956300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 389
Target Start/End: Original strand, 38010643 - 38010679
Alignment:
Q  353 tgttaatttataagttttcactaataaaaattatatc 389  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  38010643 tgttaattcataagttttcactaacaaaaattatatc 38010679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 47413490 - 47413401
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||||||||||| ||||||| || | ||||||||||||| |||||| || ||||||||||||||| ||||||||||||||||||||    
T  47413490 ttatgttaatttataatttttcaccaacacaaattatatcttcataacctgttatttcataaactacattgacaagcttataaataatac 47413401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 46500968 - 46501058
Alignment:
Q  350 ttatgttaatttataagttttcactaata-aaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||| |||||||||||||||||||   |||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  46500968 ttatgttgatttataagttttcactaacggaaaattgtatcttcataacctattttttcataaactacaatgacaagcttataaataatac 46501058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 475
Target Start/End: Complemental strand, 50919603 - 50919480
Alignment:
Q  352 atgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatacnnnnnnntcatt 451  Q
    |||||||||||| |||||| | |||  |||||| ||||||| |||||| |||||| ||||||||||| ||||| |||||||||||||        |||||    
T  50919603 atgttaatttattagtttttattaacgaaaattgtatcttcataacctgtttttttataaactacattgacaaacttataaataatataaaaaactcatt 50919504  T
Q  452 tatttgcttaaactattttatata 475  Q
    ||||||| ||||||||||||||||    
T  50919503 tatttgcataaactattttatata 50919480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 3069822 - 3069911
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| |||||| | |||||| ||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||    
T  3069822 ttatgttaattcataagttctcactagtgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatac 3069911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 6337724 - 6337813
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| || |||| ||||||| ||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||    
T  6337724 ttatgttaattcataagttctcgctaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatac 6337813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 41196678 - 41196767
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| | ||| | ||||||| ||||||| ||||||| ||| || |||||||||||||||||| ||||||||||| ||||||||    
T  41196678 ttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcataaactacattgacaagcttatgaataatac 41196767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 435
Target Start/End: Original strand, 41576363 - 41576448
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaata 435  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| ||| |||| ||| ||||||| ||||  |||||||||||||||    
T  41576363 ttatgttaatatataagttatcactaacaaaaattatatcttcataaactatatttacataaacaacatttacaagcttataaata 41576448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 48819417 - 48819328
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| ||||||| ||||| | ||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||    
T  48819417 ttatgttaattcataagttctcactaacaaaaaatgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatac 48819328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 352 - 439
Target Start/End: Original strand, 15515317 - 15515404
Alignment:
Q  352 atgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||| ||||||| |||||||  |||||| ||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||    
T  15515317 atgttaattcataagttctcactaacgaaaattgtatcttcataagctcttttttcataaactaccttgacaagcttatgaataatac 15515404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 49971360 - 49971281
Alignment:
Q  360 ttataagttt-tcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||||||||| |||||||  |||||| ||||||||||| || ||||||||||||||||||  ||||||||||||||||||    
T  49971360 ttataagtttctcactaacgaaaattgtatcttcgtaagctgttttttcataaactacattaacaagcttataaataata 49971281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 41003505 - 41003416
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaacta-catcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| |||||||||||||||||||||| |||| ||  |||||||||||||| | | ||||| ||||||||||||||    
T  41003505 ttatgttaattaataagttctcactaataaaaattatatcttagtaagct-gtttttcataaactacctttgacaaacttataaataatac 41003416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 37329380 - 37329469
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||| |||| ||  |||||| ||||||| ||| || |||||||||||||||| | |||||| |||| ||||||||    
T  37329380 ttatgttaatttataagttctcaccaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagtttatgaataatac 37329469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 14461009 - 14461075
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    ||||||||||||||||||| |||||||| |||||| ||||||  ||| || ||||||||||||||||    
T  14461009 ttatgttaatttataagttctcactaatgaaaattgtatctttataaactgttttttcataaactac 14461075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 26988266 - 26988180
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataa 436  Q
    ||||||||||| ||||||||| |||||  | |||| ||||||| ||| || |||||||||||||||| | ||||||||||| |||||    
T  26988266 ttatgttaattcataagtttttactaacgacaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataa 26988180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 28690122 - 28690033
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| | || || ||||||||||||||| ||||||| ||| || ||| |||||||||||| | ||||| ||||| ||||||||    
T  28690122 ttatgttaattcagaatttctcactaataaaaattgtatcttcataagctgtttgttcataaactaccttgacaaacttatgaataatac 28690033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 35282562 - 35282650
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||| |||||||||||||||| |||||| ||||||| |||  | |||||||||||||||| |  ||| | ||||||||||||    
T  35282562 ttatattaattcataagttttcactaattaaaattttatcttcataagttgttttttcataaactaccttaacatgtttataaataata 35282650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 42591500 - 42591412
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||||||||| |||||||||  |||| | ||||||| ||| ||||||||||||||| ||| |  |||| |||||||||||||    
T  42591500 ttattttaatttataagctttcactaacgaaaagtgtatcttcataaactattttttcataaaataccttaacaaacttataaataata 42591412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 438
Target Start/End: Original strand, 31378724 - 31378807
Alignment:
Q  355 ttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||||||||||||||| ||||| ||||||| ||||||  ||| |  |||||||||||||||| | ||||||||| | |||||||    
T  31378724 ttaatttataagtttttactaacaaaaattgtatctttataaacgtttttttcataaactaccttgacaagcttgttaataata 31378807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 4068233 - 4068144
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| |||||||  |||||  ||||||| |||  | |||||||||||||||| | ||||||||||| ||||||||    
T  4068233 ttatattaattcataagttctcactaacgaaaatagtatcttcataagttgttttttcataaactaccttgacaagcttatgaataatac 4068144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 16888934 - 16889022
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||| | |||| || |||||||| |||||| ||||||| ||| || |||||||||||||||| |  |||||||||| ||||||||    
T  16888934 ttatgttaagtcataaattctcactaatgaaaattgtatcttcataagctgttttttcataaactacct-tacaagcttatgaataatac 16889022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 22593375 - 22593464
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||  |||  |  |||||| |||||| |||  |||||||||| ||||||||    
T  22593375 ttatgttaatttataagttctcactaacaaaaattgtatctttataaagtgatttttcgtaaactgcatttacaagcttatgaataatac 22593464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 439
Target Start/End: Complemental strand, 1005456 - 1005369
Alignment:
Q  352 atgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||| ||||||| ||||||  ||||||| ||||||| |||    ||||||||| |||||| | ||||||||||| ||||||||    
T  1005456 atgttaattcataagttctcactatcaaaaattgtatcttcataagtagttttttcattaactacctagacaagcttatgaataatac 1005369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 430
Target Start/End: Complemental strand, 35590246 - 35590168
Alignment:
Q  352 atgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    ||||||||| ||||||| ||||| |  |||||| ||||||| ||| || ||||||||||||| || | |||||||||||    
T  35590246 atgttaattcataagttctcactgacgaaaattgtatcttcataagctgttttttcataaacaaccttgacaagcttat 35590168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 45267584 - 45267494
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctatttttt-cataaactacatcgacaagcttataaataatac 439  Q
    ||||||| ||| ||||||| | |||||  |||||| ||||||| ||| || |||||| |||||||||| | |||||||| |||||||||||    
T  45267584 ttatgtttattcataagttcttactaacgaaaattgtatcttcataagctgtttttttcataaactaccttgacaagctaataaataatac 45267494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 19395892 - 19395831
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataa 411  Q
    |||| |||||||||||| |||||||||  |||||| ||||||| |||| ||||||| |||||    
T  19395892 ttattttaatttataagctttcactaacgaaaattgtatcttcataacttatttttccataa 19395831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 435
Target Start/End: Complemental strand, 37712185 - 37712100
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaata 435  Q
    ||||||||||| ||||||| | |||||  ||| || ||||||| |||  | |||||||||||||||| | ||||||||||| ||||    
T  37712185 ttatgttaattcataagttcttactaacgaaagttgtatcttcataagttgttttttcataaactaccttgacaagcttatgaata 37712100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 9572752 - 9572840
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||| ||||||| ||||||| ||||| | ||||||| |||  | |||||||||||||||| |  |||| ||||| |||||||    
T  9572752 ttatattaattcataagttctcactaacaaaaactttatcttcataaattgttttttcataaactaccttaacaaacttatgaataata 9572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 12256673 - 12256637
Alignment:
Q  402 tttttcataaactacatcgacaagcttataaataata 438  Q
    |||||||||||||||||| |||| |||||||||||||    
T  12256673 tttttcataaactacatcaacaatcttataaataata 12256637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 12871443 - 12871499
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctatttttt 406  Q
    ||||||||||| ||||||||||| |||| |||||  ||||||| ||| |||||||||    
T  12871443 ttatgttaattcataagttttcattaatgaaaatggtatcttcataaactatttttt 12871499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 439
Target Start/End: Original strand, 26435144 - 26435232
Alignment:
Q  351 tatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||||| ||||||| ||| |||  |||| | ||||||| ||| |  |||||||||||||||| | ||||| |||| |||||||||    
T  26435144 tatgttaattcataagttctcagtaacgaaaaatgtatcttcataaacagttttttcataaactactttgacaaacttaaaaataatac 26435232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 26543086 - 26543002
Alignment:
Q  355 ttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||||||||||||||  |||||| ||  ||| |||  | ||||||||||||||||||  |||| |||||| |||||||    
T  26543086 ttaacttataagttttcactaacgaaaattgtactttcttaagttgttttttcataaactacattaacaaacttatatataatac 26543002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 27806033 - 27805947
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataa 436  Q
    ||||||||||||||||||||||||||| ||||||| ||||||  |||| | |||||||||||||||||| ||||||| |||||||||    
T  27806033 ttatgttaatttataagttttcactaacaaaaattgtatctttataacatgttttttcataaactacattgacaagcgtataaataa 27805947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 28357259 - 28357170
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||||||  |||  |||||| ||||||| |||||| |||||||||||||||||| ||||||||| ||||||||||    
T  28357259 ttatgttaatttataagttttcgttaacgaaaattgtatcttcataacctgttttttcataaactacattgacaagcttttaaataatac 28357170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 43319121 - 43319032
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| |||||||  ||||||||| |||| ||| || ||||||||||||||||||  |||||||||||||||||||    
T  43319121 ttatcttaattcataagttctcactaacgaaaattataccttcataaactgttttttcataaactacattaacaagcttataaataatac 43319032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 41419619 - 41419531
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||| ||||||| |||||||  |||||| ||||||| ||| || |||||||||||||||| | ||||||||||| |||||||    
T  41419619 ttatgttaattgataagttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataata 41419531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 28625598 - 28625509
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||| ||| |||||||  |||||| ||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||    
T  28625598 ttatgttaattcataggttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatac 28625509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 2878645 - 2878732
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||| ||| || || |||||||||| |||| ||||| ||||| |||||||    
T  2878645 ttatgttaatttaaaagttttcactaacaaaaattgtatcttc-taaactgttgtttcataaaccacattgacaaacttatgaataata 2878732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 38461248 - 38461339
Alignment:
Q  350 ttatgttaatttataagttttc--actaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||||||||||| ||  ||||| ||||||||||||||| ||| || |||||||||||| |||||  |||| ||||||||||||||    
T  38461248 ttattttaatttataagttctctcactaacaaaaattatatcttcataaactgttttttcataaaatacatttacaaacttataaataatac 38461339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 13625488 - 13625577
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttt-tcataaactacatcgacaagcttataaataata 438  Q
    |||| ||||||||||||||||||||||  |||||| ||||||  ||| || ||||| ||||||||||| || |||||||||| |||||||    
T  13625488 ttatattaatttataagttttcactaacgaaaattttatctttataagctgtttttatcataaactacctcaacaagcttatgaataata 13625577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 29659178 - 29659089
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| |||||||| |||||| ||  ||| ||| || ||||||| ||||||||||  |||||||||||||||||||    
T  29659178 ttatcttaattcataagttctcactaatgaaaattgtactttcataaactgttttttcttaaactacattaacaagcttataaataatac 29659089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 40452445 - 40452533
Alignment:
Q  350 ttatgttaatttataagttttcactaat-aaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataat 437  Q
    ||||||| ||| ||||||| |||||||  ||||||||||||||| ||| || ||| |||||||||||| | ||||||||||| ||||||    
T  40452445 ttatgtttattcataagttctcactaacgaaaaattatatcttcataagctgtttcttcataaactaccttgacaagcttatgaataat 40452533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 19840144 - 19840058
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataa 436  Q
    |||| |||||||||||||||||  |||  |||||| |||   | |||| | |||||||||||||||||| |||||||||||||||||    
T  19840144 ttattttaatttataagttttcgttaacgaaaattgtattcacataacatgttttttcataaactacattgacaagcttataaataa 19840058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 11991422 - 11991334
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||  | |||||||  |||||| ||| ||| |||| ||||||||||||||| | ||  |||||||||||||||||||    
T  11991422 ttatgttaatttataaactctcactaacgaaaattgtatgttcataac-tattttttcataaaccatatttacaagcttataaataatac 11991334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 13060570 - 13060659
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| |||||||  |||||  || |||| ||| || |||||||||||||||| | ||||||||||| || |||||    
T  13060570 ttatgttaattcataagttctcactaacgaaaatggtaacttcataagctgttttttcataaactaccttgacaagcttatgaacaatac 13060659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 17657360 - 17657271
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| |||||||  |||||  ||||||| |||  | |||||||||||||||||  | ||||||||| ||||||||    
T  17657360 ttatgttaattcataagttctcactaacgaaaatcgtatcttcataagatgttttttcataaactacaatggcaagcttatgaataatac 17657271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 23087747 - 23087836
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| ||||||| ||||||| || |||| | |  | ||||||||||||||| ||  |||||||||||||||||||    
T  23087747 ttatattaattcataagttctcactaacaaaaattgtaccttcatgagttgttttttcataaactatattaacaagcttataaataatac 23087836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 24030332 - 24030244
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| |||||||  |||||| |||| ||| ||  | |||||||||||||||| | ||||||||||| ||||||||    
T  24030332 ttatgttaattcataagttctcactaacgaaaattgtatcctcgcaag-tgttttttcataaactactttgacaagcttatgaataatac 24030244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 38498686 - 38498645
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatctt 391  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  38498686 ttattttaatttataagttttcactaacaaaaattatatctt 38498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 430
Target Start/End: Original strand, 39154732 - 39154809
Alignment:
Q  353 tgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    |||||||| ||||||| ||| |||||||||||  |||||| ||| |  |||||||||||||||| | |||||||||||    
T  39154732 tgttaattcataagttctcaataataaaaattgcatcttcataatcagttttttcataaactaccttgacaagcttat 39154809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 1576748 - 1576668
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    |||||||||||  |||||| ||||||| ||||||| |||||||  ||  | ||||| |||||||||||| |||||||||||    
T  1576748 ttatgttaattcttaagttctcactaacaaaaattgtatcttcacaagttgtttttccataaactacattgacaagcttat 1576668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 430
Target Start/End: Original strand, 1608067 - 1608147
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    |||||||||||  |||||| ||||||| ||||||| |||||||  ||  | ||||| |||||||||||| |||||||||||    
T  1608067 ttatgttaattcttaagttctcactaacaaaaattgtatcttcacaagttgtttttccataaactacattgacaagcttat 1608147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 6144856 - 6144776
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    |||| |||||| ||||||| || |||| ||||||| ||| ||| ||| ||||||||||||||| ||| | |||||||||||    
T  6144856 ttatattaattcataagttctcgctaacaaaaattgtatattcataagctattttttcataaaataccttgacaagcttat 6144776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 12467377 - 12467293
Alignment:
Q  356 taatttataagttttcactaataaaaattatatcttcgtaacctatttttt-cataaactacatcgacaagcttataaataatac 439  Q
    ||||| ||||||| ||||||| ||||||| | ||||| ||| || |||||| |||||||||| | ||||||||||| ||||||||    
T  12467377 taattcataagttctcactaacaaaaattgtctcttcataagctgtttttttcataaactaccttgacaagcttatgaataatac 12467293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 12986988 - 12987071
Alignment:
Q  356 taatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||| ||||||| ||||||| ||||||  || |||| ||| || |||||||||||||||| | ||||||||||| || |||||    
T  12986988 taattcataagttctcactaacaaaaatggtaacttcataaactgttttttcataaactaccttgacaagcttatgaacaatac 12987071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 40697124 - 40697030
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctatttt-----ttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| |||||||||||  || ||||||| ||||||| ||| || ||||     |||||||| ||| | ||||||||||||||||||||    
T  40697124 ttatgttaattcataagttttcaggaacaaaaattgtatcttcataagctgttttttttcttcataaaataccttgacaagcttataaataatac 40697030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 43268604 - 43268646
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttc 392  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||    
T  43268604 ttatgttaatttataagttctcactaacaaaaattgtatcttc 43268646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 1868964 - 1868875
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||| ||| |||||||  |||||| ||||||| |||  |  ||||||||||||||| | ||||||||| | ||||||||    
T  1868964 ttatgttaattgatacgttctcactaacgaaaattgtatcttcataagttgatttttcataaactaccttgacaagcttgtgaataatac 1868875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 28357470 - 28357381
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| ||||||  |||||| |||||||  ||||||  | |||| ||| || ||||||||||||||||||  |||| ||||||||||||||    
T  28357470 ttatcttaattcgtaagttctcactaacgaaaattggaccttcataaactgttttttcataaactacattaacaaacttataaataatac 28357381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 29418720 - 29418809
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| ||||||||||| || |||||||  |||||| || |||| |||  | ||||||||||||||||||   || |||||||||||||||    
T  29418720 ttatcttaatttataaattctcactaacgaaaattgtaccttcataaattgttttttcataaactacattagcatgcttataaataatac 29418809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 29922157 - 29922246
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||| | ||||||| ||||||| ||| | | ||| || | |||||||||||||| | ||||||||||| ||||||||    
T  29922157 ttatattaattcataagctctcactaaaaaaaattgtatatgcataagctgtgttttcataaactaccttgacaagcttatgaataatac 29922246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 439
Target Start/End: Complemental strand, 41534712 - 41534652
Alignment:
Q  379 aaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||| ||||||| ||| || ||||||| |||||||| | ||||||||||| ||||||||    
T  41534712 aaaattgtatcttcataagctgttttttcgtaaactaccttgacaagcttatgaataatac 41534652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 438
Target Start/End: Complemental strand, 8601317 - 8601231
Alignment:
Q  352 atgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||||||||||||| |||||||||| ||||||| ||||||| |||||  |||||||||||||||||| |||| ||||||||||||||    
T  8601317 atgttaatttataatttttcactaacaaaaattgtatcttcataaccagttttttcataaactacattgacaggcttataaataata 8601231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 2405303 - 2405223
Alignment:
Q  352 atgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataa 432  Q
    ||||||||| ||||||||||| ||| ||||||| ||||| | ||| ||||||||||||||||||||| |||||||||||||    
T  2405303 atgttaattaataagttttcattaaaaaaaattgtatctacataagctattttttcataaactacattgacaagcttataa 2405223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 488352 - 488441
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||   || | ||||||||||||||||| | ||||||||||| ||||||||    
T  488352 ttatgttaattcataagttctcactaataaaaattgtatctttacaagcaattttttcataaactaccttgacaagcttattaataatac 488441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 897088 - 896999
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| ||||||||||||||||||||||  |||||  ||||| |||||  | |||||||||||||||||| ||||||||||| ||||||||    
T  897088 ttatattaatttataagttttcactaacgaaaatcgtatctacgtaaattgttttttcataaactacattgacaagcttatgaataatac 896999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 42617198 - 42617264
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| ||||||||||||||||||||||  ||||| |||||||| ||| |||||||||||||||||||    
T  42617198 ttattttaatttataagttttcactaacgaaaatcatatcttcataaactattttttcataaactac 42617264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 10046350 - 10046261
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||| ||||||| |||  |||||| ||| ||| |||||| |||||| ||||||||||| |||||| ||||| |||||||    
T  10046350 ttatgttaatttatatgttttcaataacgaaaattgtattttcataacctgtttttttataaactacattgacaagtttatagataatac 10046261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 17222947 - 17222858
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| | |||||  |||||| ||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||    
T  17222947 ttatgttaattcataagttctaactaacgaaaattgtatcttcataatctgttttttcataaactaccttgacaagcttatgaataatac 17222858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 36255004 - 36255093
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| |||||||| |||||| ||||||| ||| || |||||||| ||||||| | ||||||||||| || |||||    
T  36255004 ttatgttaattcataagttctcactaattaaaattgtatcttcataagctgttttttcacaaactacgttgacaagcttatgaacaatac 36255093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 19725411 - 19725322
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||||||||| | |||||||| |||||||||||||| ||  || |||||||||||| ||| |  |||| ||||||||||||||    
T  19725411 ttattttaatttataagctctcactaatgaaaattatatcttcatagactgttttttcataaaataccttaacaaacttataaataatac 19725322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 23335760 - 23335671
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| ||||| || |||||| ||||||| ||| || |||||||||||||||| | || | |||||| ||||||||    
T  23335760 ttatgttaattcataagttctcacttatgaaaattgtatcttcataagctgttttttcataaactaccttgatatgcttatgaataatac 23335671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 29877757 - 29877668
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| ||||||| ||||||| ||||||| ||| ||  ||||||||||||||| |   ||||||||| ||||||||    
T  29877757 ttatgttaattcataagttctcactaacaaaaattgtatcttcataagctgctttttcataaactaccttagcaagcttatgaataatac 29877668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 35010329 - 35010240
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||||||||||| |||| |||||  ||| || ||||||  ||| ||||||| ||||||||||| | ||||| ||||||||||||||    
T  35010329 ttatgttaatttataaatttttactaacgaaacttgtatctttataaactattttatcataaactacgttgacaaacttataaataatac 35010240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 9319166 - 9319098
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacat 418  Q
    |||||||||||| |||||||||| |||| |||||| || |||| ||| || ||||||||||||||||||    
T  9319166 ttatgttaatttttaagttttcagtaatgaaaattgtagcttcataaactgttttttcataaactacat 9319098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 46704238 - 46704326
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||| ||||||| |||||||| |||||| ||||||| ||| || |||||||||||||||| |  ||||||| || |||||||    
T  46704238 ttatattaattcataagttctcactaatgaaaattttatcttcataagctgttttttcataaactaccttaacaagctcatgaataata 46704326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 418
Target Start/End: Original strand, 4398176 - 4398242
Alignment:
Q  352 atgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacat 418  Q
    ||||||| |||||| |||| | |||  |||||||||||||| ||||| |||||||||||||||||||    
T  4398176 atgttaaattataaatttttattaacgaaaattatatcttcataaccaattttttcataaactacat 4398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 15184664 - 15184598
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| |||||||||||||| |||||||  |||||| ||||||| ||| || ||||||||||||||||    
T  15184664 ttattttaatttataagttctcactaacgaaaattgtatcttcataaactgttttttcataaactac 15184598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 22273898 - 22273832
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    ||||||||||| |||| || ||||||| ||||||| ||||||| ||| || ||||||||||||||||    
T  22273898 ttatgttaattcataacttctcactaacaaaaattgtatcttcataagctgttttttcataaactac 22273832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 32628896 - 32628810
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataa 436  Q
    |||||||||||  |||||| ||||| || |||||| |||||||  || || |||||||||||| ||| ||||||||||||| |||||    
T  32628896 ttatgttaattcgtaagttctcactgatcaaaattgtatcttcacaagctgttttttcataaattacctcgacaagcttatgaataa 32628810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 52700511 - 52700601
Alignment:
Q  350 ttatgttaattt-ataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||||||| ||||||| | |||||  |||||  ||||||| ||| |||||||||||||||| || |  |||||||||||||||||||    
T  52700511 ttatgttaattttataagttcttactaacgaaaatcgtatcttcataaactattttttcataaaccacttttacaagcttataaataatac 52700601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 28074482 - 28074394
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||| || | |||||||| ||||  |||||| ||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||    
T  28074482 ttatgttatttcacaagttttcgctaacgaaaattgtatcttcataagct-ttttttcataaactaccttgacaagcttatgaataatac 28074394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 825800 - 825712
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||| ||||| ||||||||| ||||| | ||||||| | | || |||||||||||||||  | |||| |||||| |||||||    
T  825800 ttatgttaattcataagctttcactaacaaaaaatgtatcttcatgagctgttttttcataaactaactagacaggcttatgaataata 825712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 2494404 - 2494456
Alignment:
Q  386 tatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||| ||| ||||||||||||||||||| |  ||||||||||||||||||    
T  2494404 tatcttcataaactattttttcataaactacctttacaagcttataaataata 2494456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 12495612 - 12495703
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac--atcgacaagcttataaataatac 439  Q
    ||||||||||||||||||| |||||||| || ||| ||||||  | | || ||||||||||||||||   | ||||||||||| ||||||||    
T  12495612 ttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcataaactaccttttgacaagcttatgaataatac 12495703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 439
Target Start/End: Original strand, 21216325 - 21216385
Alignment:
Q  379 aaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||| || |||| ||||||| ||||||||||||||| | ||||||||||| ||||||||    
T  21216325 aaaattgtagcttcataacctactttttcataaactaccttgacaagcttatgaataatac 21216385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 438
Target Start/End: Original strand, 48591396 - 48591480
Alignment:
Q  354 gttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||| ||||||| ||| |||  |||||| ||||||| ||| || |||||||||||||||| | ||||||| ||| |||||||    
T  48591396 gttaattcataagttctcattaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcgtatgaataata 48591480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 11679095 - 11679184
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgac-aagcttataaataatac 439  Q
    |||||||||||||||| |||| |||||  |||||| ||||||| |||  |  |||| ||||||||||||| || |||||||||||||||||    
T  11679095 ttatgttaatttataaattttaactaacgaaaattgtatcttcataa-tttgttttccataaactacatcaacaaagcttataaataatac 11679184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 11687374 - 11687463
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgac-aagcttataaataatac 439  Q
    |||||||||||||||| |||| |||||  |||||| ||||||| |||  |  |||| ||||||||||||| || |||||||||||||||||    
T  11687374 ttatgttaatttataaattttaactaacgaaaattgtatcttcataa-tttgttttccataaactacatcaacaaagcttataaataatac 11687463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 38345790 - 38345856
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    ||||||||||| ||||||| |  |||||||||||| ||||||| |||  | ||||||||||||||||    
T  38345790 ttatgttaattcataagttctggctaataaaaattgtatcttcataagttgttttttcataaactac 38345856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 43415256 - 43415346
Alignment:
Q  350 ttatgttaatttataag-ttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||| |||||||||| ||| ||||||||||  |||  | ||||||| ||||||||||  |||| ||||| ||||||||    
T  43415256 ttatgttaattcataagtttttcactaacaaatattatatcttgataaattgttttttcgtaaactacattaacaaccttatgaataatac 43415346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 48721938 - 48721880
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttca 408  Q
    |||| |||||| ||||||| ||||||| ||||||||||||||| |||  ||||||||||    
T  48721938 ttatattaattcataagttctcactaacaaaaattatatcttcataagttattttttca 48721880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 18424246 - 18424334
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||||||| ||| ||||||| ||||||| |||  |  ||||||||||||||| |  ||||| |||| ||||||||    
T  18424246 ttatgttaattcataagttttcaataacaaaaattgtatcttcataa-attgtttttcataaactaccttcacaagtttatgaataatac 18424334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 430
Target Start/End: Complemental strand, 36741019 - 36740942
Alignment:
Q  353 tgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    |||| ||| ||||||| |||||||| |||||| ||||||| | | || | |||||||||||||| | |||||||||||    
T  36741019 tgttgattcataagttctcactaatgaaaattgtatcttcatgaactgtattttcataaactactttgacaagcttat 36740942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 39932734 - 39932811
Alignment:
Q  362 ataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||| ||||||||| ||||| ||||||| |||  | |||||||||| ||||| |  |||| ||||||||||||||    
T  39932734 ataagttctcactaatagaaattgtatcttcataaattgttttttcatacactaccttaacaatcttataaataatac 39932811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 42611837 - 42611924
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| ||||| |  |||| | ||||||| |||  | |||||||||||||||| ||||||||||||| ||||||||    
T  42611837 ttatgttaattcataagttgtcact-acgaaaactgtatcttcataagttgttttttcataaactac-tcgacaagcttatgaataatac 42611924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 55638049 - 55638138
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||| |||||||   | ||| ||||||  ||| || ||||||||||||||| ||  |||| ||||| ||||||||    
T  55638049 ttatgttaatttataagttctcactaacggagattgtatctttataaactgttttttcataaactatatttacaaacttatgaataatac 55638138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 41229021 - 41228933
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||| ||||||| | |||||| |||||| ||||||| | |  | |||||||||||||||| |  |||||||||| |||||||    
T  41229021 ttatattaattcataagttctaactaatgaaaattgtatcttcatcagttgttttttcataaactaccttaacaagcttatgaataata 41228933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 43699470 - 43699537
Alignment:
Q  371 cactaataaaaattatatcttcgtaac--ctattttttcataaactacatcgacaagcttataaataa 436  Q
    ||||||| |||||| ||||||| |||   || |||||||||||||||||| ||||||||||| |||||    
T  43699470 cactaatgaaaattgtatcttcataagagctgttttttcataaactacattgacaagcttatgaataa 43699537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 355 - 431
Target Start/End: Original strand, 18855243 - 18855319
Alignment:
Q  355 ttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttata 431  Q
    |||||||||||||||||||| |  |||||||||||||| ||| |||||||| |||||||||||| ||||||||||||    
T  18855243 ttaatttataagttttcacttagcaaaattatatcttcataatctatttttccataaactacattgacaagcttata 18855319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 14691267 - 14691356
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| |||||||  |||||||||||||| |||  | |||||||||||| ||||| ||||||||||| ||||||||    
T  14691267 ttatgttaattcataagttctcactaacgaaaattatatcttcataaattgttttttcataaattacattgacaagcttatgaataatac 14691356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 438
Target Start/End: Complemental strand, 43391831 - 43391751
Alignment:
Q  358 atttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||||||||||||||| || ||||||||||||||| |||  |||||||||||||||||| |  |||| ||||| |||||||    
T  43391831 atttataagttttcacaaacaaaaattatatcttcataaattattttttcataaactaccttaacaaacttatgaataata 43391751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 439
Target Start/End: Original strand, 23119887 - 23119977
Alignment:
Q  349 cttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||| ||||||||||||||||| || ||||||| |||||||  || || || |||| |||||||||| ||||| ||||| ||||||||    
T  23119887 cttatgtaaatttataagttttcacgaacaaaaattgtatcttcacaaactgttatttcttaaactacattgacaaacttatgaataatac 23119977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 22032880 - 22032791
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||||||||||| |||||||  |||||| || |||| |||  | ||||||||||||||||||  ||| |||||||||||||||    
T  22032880 ttatcttaatttataagttctcactaacgaaaattgtaccttcataaattgttttttcataaactacattaacatgcttataaataatac 22032791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 47654382 - 47654471
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| |||||||  |||||| || |||| ||| || ||||||||||||||||||  ||||||||||| |||||||    
T  47654382 ttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttcataaactacattaacaagcttatatataatac 47654471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 8180559 - 8180647
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||| ||||||||||||||||||| ||||||| ||  |||  || ||||| ||||||||| |  ||||||||||||||||||    
T  8180559 ttatattaattcataagttttcactaataaatattatatttttataagttaattttttataaactaccttaacaagcttataaataata 8180647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 14675928 - 14675994
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| |||||||||||| |||| ||||| |||||| ||||||| ||| || ||||||||||||||||    
T  14675928 ttattttaatttataagctttcgctaatgaaaattgtatcttcataaactgttttttcataaactac 14675994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 431
Target Start/End: Complemental strand, 16012812 - 16012735
Alignment:
Q  354 gttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttata 431  Q
    ||||||| |||||||||||||||  |||||| |||||||  || |  |||||||||||||||| | ||||||||||||    
T  16012812 gttaattcataagttttcactaacgaaaattgtatcttcagaagcagttttttcataaactactttgacaagcttata 16012735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 20888692 - 20888603
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||||||||  |  |||||| ||||||| |||  | |||||||||||||||| |   ||||||||| ||||||||    
T  20888692 ttatgttaatttataagttttcacggaagaaaattgtatcttcataaattgttttttcataaactacctttgcaagcttatgaataatac 20888603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 439
Target Start/End: Complemental strand, 29378759 - 29378674
Alignment:
Q  354 gttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||| ||||||| | |||||  |||||| ||||||| ||| || |||||||||||||||| | ||||| || |||||||||||    
T  29378759 gttaattcataagttcttactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaaactcataaataatac 29378674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 30181668 - 30181579
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| |||||||  ||||||| ||||   ||||||| ||| || |||||| ||||||||| | ||||||||||| ||||||||    
T  30181668 ttatgttaattcataagttcccactaatgaaaacagtatcttcataagctgttttttgataaactaccttgacaagcttatgaataatac 30181579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 48021616 - 48021703
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||| |||||||||||||||| |||||| ||||||| | |  || ||||||||||||||| |  |||||||||| |||||||    
T  48021616 ttatattaattcataagttttcactaatgaaaattgtatcttcattagtta-tttttcataaactactttaacaagcttatgaataata 48021703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 23137131 - 23137197
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| |||||||||||| | |||||||| |||||| ||||||| ||| | |||||| ||||||||||    
T  23137131 ttattttaatttataagctctcactaatgaaaattgtatcttcataaacgatttttacataaactac 23137197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 384
Target Start/End: Complemental strand, 27811463 - 27811429
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaatt 384  Q
    ||||||||||||||||||||||||||| |||||||    
T  27811463 ttatgttaatttataagttttcactaacaaaaatt 27811429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 43818846 - 43818936
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatc-ttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| |||||||| |||||| || | ||| ||| || ||||||||||||  ||||  |||||||||||||||||||    
T  43818846 ttatcttaattcataagttctcactaatgaaaattgtaaccttcataaactgttttttcataaataacattaacaagcttataaataatac 43818936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 38654137 - 38654224
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||||||||||||||| |||| |  || ||||||| ||||||| ||| | ||||||| |||||||||||  |||| | |||||||||||    
T  38654137 ttatgttaatttataaatttttatcaaaaaaaattgtatcttcataatcaatttttt-ataaactacattaacaaacgtataaataata 38654224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 44613441 - 44613529
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||| ||||||| | | ||||||||||| |||| || |||  | |||||||||||||||| |  |||||||||| |||||||    
T  44613441 ttatattaattcataagttctaattaataaaaattgtatcgtcataagttgttttttcataaactaccttaacaagcttatgaataata 44613529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 21610017 - 21610104
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataat 437  Q
    |||| |||||||||||||| | |||||  |||||||||| ||| ||| |||||||||||||||||||||  |||||||||||||||||    
T  21610017 ttattttaatttataagttcttactaacgaaaattatatattcataaactattttttcataaactacattaacaagcttataaataat 21610104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 437
Target Start/End: Complemental strand, 8014906 - 8014819
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataat 437  Q
    |||||||||||||| ||||||||||||  |||||| ||||||| ||  |  |||||||||||||||| | ||||||||||| ||||||    
T  8014906 ttatgttaatttatcagttttcactaaccaaaattgtatcttcatatgcagttttttcataaactaccttgacaagcttatgaataat 8014819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 715888 - 715940
Alignment:
Q  359 tttataagttttcactaataaaaattatatcttcgtaacctattttttcataa 411  Q
    |||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||    
T  715888 tttataagttttcactaacaaaaattgtatcttcataaactattttttcataa 715940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 9202367 - 9202431
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaact 414  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||| ||  || ||||||||||||||    
T  9202367 ttatgttaattcataagttatcactaataaaaattgtatcttcatatgctgttttttcataaact 9202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 10874102 - 10874014
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||| |||||||||||| ||  |||||| ||||||| ||| || |||| ||||||||||| |  |||||||||| |||||||    
T  10874102 ttatgttaattcataagttttcaccaactaaaattgtatcttcataagctgttttctcataaactaccttaacaagcttattaataata 10874014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 439
Target Start/End: Original strand, 5958357 - 5958398
Alignment:
Q  398 ctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  5958357 ctattttttcataaactacatcgacaaacatataaataatac 5958398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 34510029 - 34509941
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||||| |||||    |||||||||||| ||| || |||| ||||||||| ||| ||||| ||||| ||||||||    
T  34510029 ttatgttaatttataagtttt-actaacgggaattatatcttcataaactcttttatcataaactccattgacaaacttatgaataatac 34509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 435
Target Start/End: Complemental strand, 13429571 - 13429488
Alignment:
Q  353 tgttaatttataagttttcactaa-taaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaata 435  Q
    |||||||| ||||||| ||||||| | |||||| |||| || ||| || |||||||||||||||| | ||||||||||| ||||    
T  13429571 tgttaattcataagttctcactaaatgaaaattgtatcctcataaactgttttttcataaactactttgacaagcttatgaata 13429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 413
Target Start/End: Original strand, 32675857 - 32675920
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaac 413  Q
    |||| |||||| ||||||| |||||||| |||||| ||||||| |||  |||||||||||||||    
T  32675857 ttatattaattcataagttctcactaatgaaaattgtatcttcataagttattttttcataaac 32675920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 32165229 - 32165295
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| |||||||||||| | |||||||  |||||| ||||||| ||| || ||||||||||||||||    
T  32165229 ttattttaatttataagctctcactaacgaaaattgtatcttcataaactgttttttcataaactac 32165295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 2255852 - 2255763
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||| ||| ||||||  ||||||| ||||||| ||| || |||||||||||| ||| |  |||||||||| ||| ||||    
T  2255852 ttatgttaattcatatgttctcactaccaaaaattgtatcttcataagctgttttttcataaattaccttaacaagcttatgaatcatac 2255763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 2027144 - 2027208
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaact 414  Q
    ||||||||||| ||||||| | ||||| |||| || ||||||| ||| || ||||||||||||||    
T  2027144 ttatgttaattcataagttcttactaacaaaagttgtatcttcataagctgttttttcataaact 2027208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 439
Target Start/End: Original strand, 2034226 - 2034286
Alignment:
Q  379 aaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||| |||||| ||||  | |||||||||||||||| | ||||| ||||||||||||||    
T  2034226 aaaattgtatcttggtaagttgttttttcataaactaccttgacaaacttataaataatac 2034286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 439
Target Start/End: Complemental strand, 16589868 - 16589780
Alignment:
Q  351 tatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||||| ||||||| ||| |||  ||||| |||||||| |||  | |||||||||||||| | | ||||| ||||| ||||||||    
T  16589868 tatgttaattcataagttctcaataacgaaaatcatatcttcataaattgttttttcataaactcctttgacaaacttatgaataatac 16589780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 439
Target Start/End: Original strand, 16605512 - 16605600
Alignment:
Q  351 tatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||||| ||||||| ||| |||  ||||| |||||||| |||  | |||||||||||||| | | ||||| ||||| ||||||||    
T  16605512 tatgttaattcataagttctcaataacgaaaatcatatcttcataaattgttttttcataaactcctttgacaaacttatgaataatac 16605600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 21891306 - 21891394
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||| ||||||| |  | ||  |||||| ||||||| |||  | || ||||||||||||||| ||||||||||| |||||||    
T  21891306 ttatgttaattcataagttcttgcgaacgaaaattctatcttcataagttgttatttcataaactacattgacaagcttatgaataata 21891394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 29623445 - 29623533
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||| ||||||| |||||||  |||| | ||| ||| |||  | ||||||||||||||||||  |||| || ||||||||||    
T  29623445 ttatgttaattcataagttctcactaacgaaaactttattttcataagttgttttttcataaactacattaacaaactcataaataata 29623533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 439
Target Start/End: Complemental strand, 34413428 - 34413348
Alignment:
Q  359 tttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||| ||||||||||  |||||| ||| ||  |||  | ||||||||||||||||||  |||| ||||||||||||||    
T  34413428 tttataaattttcactaaataaaattgtatgtttataaattgttttttcataaactacatttacaaacttataaataatac 34413348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 10521266 - 10521183
Alignment:
Q  356 taatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||||| |||| |||||||||| |||  | || ||||||||||||||| ||||||||||| ||||||||    
T  10521266 taatttataagttttcactaacaaaagttatatcttcataaaatgttgtttcataaactacattgacaagcttatgaataatac 10521183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 10667510 - 10667427
Alignment:
Q  356 taatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||||||||||||| |||| |||||||||| |||  | || ||||||||||||||| ||||||||||| ||||||||    
T  10667510 taatatataagttttcactaacaaaagttatatcttcataaaatgttgtttcataaactacattgacaagcttatgaataatac 10667427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 37778251 - 37778185
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| |||||||||||||| ||||||| ||||||| ||||||| ||||| |||||||||||||||||    
T  37778251 ttattttaatttataagttctcactaacaaaaattgtatcttcataaccgattttttcataaactac 37778185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 42956147 - 42956236
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||| |||||||  |||||| ||||||  ||| || |||| ||||||||||| |||||||| |||| ||||||||    
T  42956147 ttatgttaatttataagttctcactaacgaaaattgtatctttataagctgttttatcataaactacttcgacaagtttatgaataatac 42956236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 37243584 - 37243495
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| |||| ||| |||| | || |||| ||| ||||||||||||||||||| |  |||||||||||||||||||    
T  37243584 ttatcttaattcataagttctcaccaatgaaaagtgtaccttcataaactattttttcataaactacgttaacaagcttataaataatac 37243495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 53218008 - 53218097
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||||||||||| |||||||  |||||| |||||||  ||  | |||||||||||||||| | ||||||||||| ||||||||    
T  53218008 ttattttaatttataagttctcactaacgaaaattgtatcttcaaaagttgttttttcataaactaccttgacaagcttatgaataatac 53218097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 439
Target Start/End: Complemental strand, 10448863 - 10448803
Alignment:
Q  379 aaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||| |||| ||| || ||||||||||||||||||  |||||||||||||||||||    
T  10448863 aaaattataccttcataaactgttttttcataaactacattaacaagcttataaataatac 10448803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 27769725 - 27769675
Alignment:
Q  388 tcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||||||    
T  27769725 tcttcataaccaactttttcataaactacattgacaagcttataaataata 27769675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 439
Target Start/End: Original strand, 52421132 - 52421198
Alignment:
Q  373 ctaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| ||||||| ||||||| | | ||||||||||||||||||| | ||||||||||| ||||||||    
T  52421132 ctaacaaaaattgtatcttcattaactattttttcataaactaccttgacaagcttatgaataatac 52421198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 28741182 - 28741271
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| |||||||  |||||| || |||| ||| || |||||||||||||||| |  |||||||||||| ||||||    
T  28741182 ttatcttaattcataagttctcactaacgaaaattgtaccttcataatctgttttttcataaactactttaacaagcttataagtaatac 28741271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 34707681 - 34707770
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||||||  |||||| || ||||  |||||| ||||||||| | || |||||||||||||||| |  |||||||||| ||||||||    
T  34707681 ttatgttaattcgtaagttctcgctaacgaaaattgtatcttcgttagctgttttttcataaactaccttaacaagcttatgaataatac 34707770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 36182622 - 36182533
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaaccta-ttttttcataaactacatcgacaagcttataaataata 438  Q
    |||||||||||| ||| || || |||| ||||||||||| ||| ||| ||| |||||||||| ||||| |||| |||||||| |||||||    
T  36182622 ttatgttaatttttaaattctcgctaacaaaaattatatattcataagctagttttttcatatactacttcgaaaagcttatgaataata 36182533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 35583688 - 35583744
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctatttttt 406  Q
    |||||||||||||||||| ||||||||  |||||| ||||||| |||||| ||||||    
T  35583688 ttatgttaatttataagtcttcactaactaaaattgtatcttcataacctttttttt 35583744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 40581044 - 40581134
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctatttt-ttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| |||||||  |||||| | ||||| ||  || |||| |||||||||||| | ||||||||||| ||||||||    
T  40581044 ttatgttaattcataagttctcactaacgaaaattgtttcttcatacgctgtttttttcataaactaccttgacaagcttattaataatac 40581134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 43079906 - 43079988
Alignment:
Q  354 gttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataa 436  Q
    ||||||| ||||||| ||| | |  |||||| ||||||| ||| || |||||||||||||||| | ||||||||||| |||||    
T  43079906 gttaattcataagttctcaatcacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataa 43079988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 439
Target Start/End: Complemental strand, 52021353 - 52021275
Alignment:
Q  362 ataagttttcactaataaaaattatatcttcgtaacctatttttt-cataaactacatcgacaagcttataaataatac 439  Q
    ||||||| |||||||  |||||||||||||| ||| || |||||| |||||||||| | ||||| ||||| ||||||||    
T  52021353 ataagttctcactaacgaaaattatatcttcataagctgtttttttcataaactaccttgacaatcttatgaataatac 52021275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 1516066 - 1516155
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||||||||||| |||||||| |||||| ||||||  ||| ||  |||| |||||| ||| |  |||| ||||||||||||||    
T  1516066 ttattttaatttataagttctcactaatgaaaattgtatctttataaactgattttccataaaataccttaacaaacttataaataatac 1516155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 416
Target Start/End: Complemental strand, 29614306 - 29614245
Alignment:
Q  355 ttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||||||||||| | |||||||  |||||| ||||||| ||| || ||||||||||||||||    
T  29614306 ttaatttataagctctcactaacgaaaattgtatcttcataaactgttttttcataaactac 29614245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 40240545 - 40240634
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||| | |||||||  |||||| ||||||| |||  | |||||||||||||||| | |||| |||||| ||||||||    
T  40240545 ttatcttaattcataagctctcactaacgaaaattgtatcttcataagttgttttttcataaactacctagacacgcttatgaataatac 40240634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 53787720 - 53787809
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| ||| ||| ||||||||||||||  ||| || ||||||| ||||||| ||  | |||||||||| ||||||    
T  53787720 ttatcttaattcataagttctcaataacaaaaattatatctttataaactgttttttcgtaaactatattaaaaagcttataagtaatac 53787809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 438
Target Start/End: Original strand, 20365431 - 20365491
Alignment:
Q  378 aaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||||||| ||| ||  ||||||||||| ||| | ||||||||||| |||||||    
T  20365431 aaaaattatatcttcataaactgctttttcataaagtactttgacaagcttatgaataata 20365491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 22809161 - 22809249
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||| ||||||| |   |||  |||||| ||||||| ||| |  |||||||||||||||| | ||||||||||| |||||||    
T  22809161 ttatgttaattcataagttcttcttaacgaaaattgtatcttcataagcagttttttcataaactaccttgacaagcttatgaataata 22809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 24521184 - 24521224
Alignment:
Q  351 tatgttaatttataagttttcactaataaaaattatatctt 391  Q
    |||||||||||||||||||||| ||| ||||||| ||||||    
T  24521184 tatgttaatttataagttttcaataacaaaaattgtatctt 24521224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 30321702 - 30321762
Alignment:
Q  355 ttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaacta 415  Q
    ||||||||||||||||||| ||| |||||| ||||||||| | ||  ||| ||||||||||    
T  30321702 ttaatttataagttttcaccaatgaaaattgtatcttcgtgaactgatttatcataaacta 30321762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 24350487 - 24350575
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    ||||||||||| ||||||| | |||||  |||||||||||||| ||| ||||||||||||||| ||| | ||||||||||| |||||||    
T  24350487 ttatgttaattcataagttcttactaacgaaaattatatcttcataagctattttttcataaattacgttgacaagcttatgaataata 24350575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 38895777 - 38895689
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||||||||||||||||||| ||| ||| ||||||| |||  |||||||||||||||||| |  |||||||||| |||||||    
T  38895777 ttatattaatttataagttttcactaacaaatattgtatcttcataaattattttttcataaactaccttaacaagcttatgaataata 38895689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 10298894 - 10298983
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||||| ||| ||| ||||||| ||||||| ||| || |||||||||||||||| | ||||||||||| ||| ||||    
T  10298894 ttatgttaattcataagttctcattaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaatgatac 10298983  T

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Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 32924181 - 32924266
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataa 436  Q
    |||| |||||| ||||||||||||||| |||| || ||||||| |||  | ||||||||||||||||||  ||||||||||||||||    
T  32924181 ttatattaattcataagttttcactaagaaaattt-tatcttcataagttgttttttcataaactacataaacaagcttataaataa 32924266  T

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Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 38338819 - 38338885
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| |||||||||||||| |||||||  ||||| |||||||| ||| |||||||||||||||||||    
T  38338819 ttattttaatttataagttctcactaacgaaaatcatatcttcataaactattttttcataaactac 38338885  T

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Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 9131096 - 9131185
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| |||||||   |||||  |||||| ||||||| ||| || ||| |||| |||||| |||||||||||||||||||||||    
T  9131096 ttatgttaattcataagttccgactaacgaaaattgtatcttcataagctgtttcttcagaaactaaatcgacaagcttataaataatac 9131185  T

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Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 4326180 - 4326270
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgt-aacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||||||||||| |||||||||| |||| |||| ||| | | |||| |||||||||||||||||||  | || ||||| ||||||||    
T  4326180 ttatgttaatttataaattttcactaacaaaatttatgtctacataaaccgattttttcataaactacatttataaacttatgaataatac 4326270  T

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Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 24087289 - 24087200
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacc-tattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||||||||||||||| |||  |||||  ||||| ||||| | | |||||||||||||||  ||||||||||||| |||||||    
T  24087289 ttattttaatttataagttttcattaacgaaaatggtatctccgtaaacgttttttttcataaactatctcgacaagcttatgaataata 24087200  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 24866919 - 24867008
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||||||||||| ||  |||  |||||| || |||| ||| || ||||||||||||||||||  |||| ||||||||||||||    
T  24866919 ttatcttaatttataagttctcgataacgaaaattgtaccttcataagctgttttttcataaactacattaacaatcttataaataatac 24867008  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 28280827 - 28280738
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||| |||||| ||||||| ||||||| ||||  |||| |||| ||| |  ||||||||||||||||||  |||| ||||||||||||||    
T  28280827 ttatcttaattcataagttctcactaacaaaaggtataccttcataaacagttttttcataaactacattaacaaacttataaataatac 28280738  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 32975805 - 32975717
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataata 438  Q
    |||| |||||| ||||||| |||| || ||||||| ||||||| |||  | | |||||||||||||| | ||||||||||| |||||||    
T  32975805 ttatattaattcataagttctcacaaacaaaaattgtatcttcataagttgtgttttcataaactaccttgacaagcttatgaataata 32975717  T

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Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 439
Target Start/End: Original strand, 35168438 - 35168498
Alignment:
Q  379 aaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||| ||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||    
T  35168438 aaaattgtatcttcataaactgttttttcataaactaccttgacaagcttatgaataatac 35168498  T

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Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 430
Target Start/End: Original strand, 14709507 - 14709584
Alignment:
Q  352 atgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttat 430  Q
    |||||||||||||||||||||||||  |||||| ||| ||| | | || |||||||||||||||  | |||||||||||    
T  14709507 atgttaatttataagttttcactaactaaaattgtat-ttcatgagctgttttttcataaactagcttgacaagcttat 14709584  T

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Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 436
Target Start/End: Complemental strand, 35286042 - 35285960
Alignment:
Q  354 gttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataa 436  Q
    ||||||| ||||||| || ||| |||||||| ||||||| ||| |  |||||||||||||||| | ||| ||||||| |||||    
T  35286042 gttaattcataagttctcgctactaaaaattgtatcttcataagcatttttttcataaactactttgacgagcttatgaataa 35285960  T

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Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 416
Target Start/End: Original strand, 42363285 - 42363351
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac 416  Q
    |||| |||||||| ||||| ||||||| ||||||| ||||||| ||| |  ||||||||||||||||    
T  42363285 ttattttaatttaaaagttctcactaacaaaaattgtatcttcataaacggttttttcataaactac 42363351  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 2563476 - 2563387
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||| ||||| | | ||||||||||||| ||| |||  ||  | |||||||||||||||| |  |||| ||||||||||||||    
T  2563476 ttatgttaattcataagatcttactaataaaaattgtatattcaaaagttgttttttcataaactactttaacaaacttataaataatac 2563387  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 14942542 - 14942453
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||||||||||||| |  |||| |||||||  |||||| |||    |||||||||||||||  |  |||||||||||||||||||    
T  14942542 ttatgttaatttataagttcttgctaacaaaaattgcatcttcataagtcgttttttcataaactaacttaacaagcttataaataatac 14942453  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 19327984 - 19327896
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||| ||||||||||| ||| ||| ||||||| ||||||  ||| || ||||| ||||||||||||  |||| ||||| ||||||||    
T  19327984 ttatgtttatttataagttctcattaacaaaaattgtatctttataaactgtttttccataaactacat-tacaaacttatgaataatac 19327896  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 407
Target Start/End: Original strand, 29218219 - 29218276
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttc 407  Q
    |||| |||||||||||  | |||||||| |||||||||||||| ||| ||||||||||    
T  29218219 ttattttaatttataaactctcactaatgaaaattatatcttcataaactattttttc 29218276  T

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Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 58836 - 58925
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||||||| |||||||||||||||||   ||||| ||||||| |||  || ||||||||||||||||| ||||| ||||  ||||||||    
T  58836 ttatgttaaattataagttttcactaacggaaattgtatcttcataaaatactttttcataaactacattgacaaacttaagaataatac 58925  T

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Target: scaffold0512 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 4182 - 4094
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    |||||||||||||||||||  ||||||  |||||| ||| | | ||| ||||||||||||||||||  |  |||||||||||||||||||    
T  4182 ttatgttaatttataagttcccactaacgaaaattgtat-tacataagctattttttcataaactatctttacaagcttataaataatac 4094  T

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Target: scaffold0157 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 24865 - 24774
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactac--atcgacaagcttataaataatac 439  Q
    ||||||||||||||||||| |||||||| || ||| ||||||  | | || ||||||||||||||||   | ||||||||||| ||||||||    
T  24865 ttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcataaactaccttttgacaagcttatgaataatac 24774  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 24357 - 24446
Alignment:
Q  350 ttatgttaatttataagttttcactaataaaaattatatcttcgtaacctattttttcataaactacatcgacaagcttataaataatac 439  Q
    ||||| ||||| | ||||||| |||||  ||||||||||||||||||  | || ||| || |||||| | ||||||||||| ||||||||    
T  24357 ttatgataattcacaagtttttactaacgaaaattatatcttcgtaagttgttattttatcaactaccttgacaagcttatgaataatac 24446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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