View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11121_low_22 (Length: 441)
Name: NF11121_low_22
Description: NF11121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11121_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 11 - 424
Target Start/End: Original strand, 14881955 - 14882368
Alignment:
| Q |
11 |
cagagagattattgtaactgaggtctaaagcaacttggagattttgaagactcccaacctcatctggtatgtcaccactaaagacgtttctagatagatt |
110 |
Q |
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| T |
14881955 |
cagagagattattgtaactgaggtctaaagcaacttggagattttgaagactcccaacatcatctggtatgtcaccactaaagacgtttctagatagatt |
14882054 |
T |
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| Q |
111 |
gagctcatatagatttctcaaattacctattgcatgagggattggtccactaaaattattttggtcaagtcttaggacattaagcgattcaagttcgtct |
210 |
Q |
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| T |
14882055 |
gagctcatatagatttctcaaattacctattgcatgagggattggtccactaaaattattttggtcaagtcttaggacattaagcgattcaagttcgtct |
14882154 |
T |
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| Q |
211 |
aaaccatccgggagacttccatcaagagaattgttattcaaggaaagaactaacaacataggtaatttgaataggcctaatggaaaaggcccagaaaatt |
310 |
Q |
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| T |
14882155 |
aaaccatccgggagacttccatcaagagaattgttattcaaggaaagaactaacaacataggtaatttgaataggcctaacgggaaaggcccagaaaatt |
14882254 |
T |
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| Q |
311 |
gattgaatgcaagattaacctttcccaacttaggcaaatttccaagccatgctggtacttgaccaacaagtaggttattgcttaaatcaatagaggcaag |
410 |
Q |
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| T |
14882255 |
gattgaatgcaagattaacctttcccaacttaggcaaatttccaagccatgctggtacttgaccaacaagtaggttattgcttaaatcaatagaggcaag |
14882354 |
T |
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| Q |
411 |
tttgttacacaaag |
424 |
Q |
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| T |
14882355 |
tttgttacacaaag |
14882368 |
T |
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