View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11121_low_28 (Length: 401)

Name: NF11121_low_28
Description: NF11121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11121_low_28
NF11121_low_28
[»] chr5 (46 HSPs)
chr5 (166-391)||(29621681-29621906)
chr5 (170-391)||(40780553-40780774)
chr5 (167-391)||(42473507-42473731)
chr5 (166-315)||(2854303-2854451)
chr5 (167-315)||(24541187-24541336)
chr5 (167-318)||(36057586-36057737)
chr5 (167-317)||(17574318-17574468)
chr5 (167-286)||(40782181-40782300)
chr5 (166-286)||(2852885-2853005)
chr5 (167-286)||(29620138-29620257)
chr5 (167-317)||(7267843-7267993)
chr5 (166-292)||(2179786-2179912)
chr5 (166-286)||(21842962-21843082)
chr5 (185-317)||(30468254-30468386)
chr5 (166-317)||(34327634-34327785)
chr5 (167-301)||(8539675-8539809)
chr5 (166-256)||(42471547-42471637)
chr5 (167-256)||(7269446-7269535)
chr5 (167-256)||(30463900-30463989)
chr5 (167-286)||(12738706-12738825)
chr5 (167-286)||(12801529-12801648)
chr5 (315-394)||(24541067-24541146)
chr5 (167-286)||(8541241-8541360)
chr5 (315-379)||(2854199-2854263)
chr5 (213-317)||(18624982-18625086)
chr5 (204-290)||(32087551-32087637)
chr5 (169-286)||(17577905-17578022)
chr5 (213-290)||(18728603-18728680)
chr5 (170-286)||(28822060-28822176)
chr5 (166-286)||(34328797-34328917)
chr5 (223-274)||(27075876-27075927)
chr5 (167-286)||(28813735-28813856)
chr5 (213-290)||(35395379-35395456)
chr5 (217-290)||(43318061-43318134)
chr5 (317-377)||(7268033-7268093)
chr5 (213-273)||(38596914-38596974)
chr5 (320-379)||(32135720-32135779)
chr5 (317-376)||(34327826-34327885)
chr5 (317-379)||(8539866-8539928)
chr5 (317-379)||(17574508-17574570)
chr5 (167-256)||(32134231-32134320)
chr5 (230-291)||(35292382-35292443)
chr5 (192-257)||(43492132-43492197)
chr5 (320-388)||(18624870-18624938)
chr5 (317-377)||(21841182-21841242)
chr5 (230-290)||(33256463-33256523)
[»] chr7 (62 HSPs)
chr7 (167-391)||(20478042-20478266)
chr7 (167-315)||(27666041-27666189)
chr7 (167-315)||(56330-56478)
chr7 (167-311)||(29996494-29996638)
chr7 (167-286)||(20479689-20479808)
chr7 (165-317)||(37115500-37115652)
chr7 (167-286)||(35403589-35403708)
chr7 (166-286)||(35401968-35402088)
chr7 (166-317)||(39859203-39859354)
chr7 (167-317)||(38474117-38474267)
chr7 (315-391)||(27665924-27666000)
chr7 (170-286)||(27664433-27664549)
chr7 (167-317)||(45359336-45359486)
chr7 (188-317)||(24228383-24228512)
chr7 (167-311)||(6602335-6602479)
chr7 (170-286)||(39857648-39857764)
chr7 (167-317)||(30940399-30940549)
chr7 (167-316)||(47386184-47386333)
chr7 (166-286)||(37113940-37114060)
chr7 (167-286)||(77984-78103)
chr7 (167-286)||(13169653-13169772)
chr7 (316-391)||(29996373-29996448)
chr7 (170-301)||(34776905-34777036)
chr7 (189-318)||(13168142-13168274)
chr7 (315-391)||(56519-56594)
chr7 (170-289)||(37796183-37796302)
chr7 (167-284)||(23904583-23904700)
chr7 (166-286)||(47384293-47384413)
chr7 (185-280)||(13039618-13039713)
chr7 (170-256)||(6605397-6605483)
chr7 (208-290)||(33038798-33038880)
chr7 (170-284)||(48227913-48228027)
chr7 (166-286)||(34774997-34775117)
chr7 (208-317)||(35693344-35693455)
chr7 (213-301)||(45463716-45463804)
chr7 (216-290)||(366747-366821)
chr7 (168-286)||(24226582-24226700)
chr7 (317-379)||(47386080-47386142)
chr7 (213-290)||(46996703-46996780)
chr7 (223-274)||(7401949-7402000)
chr7 (168-227)||(29994907-29994966)
chr7 (317-376)||(30940299-30940358)
chr7 (208-290)||(2167520-2167602)
chr7 (185-286)||(22155817-22155918)
chr7 (185-286)||(22211732-22211833)
chr7 (214-290)||(11682828-11682904)
chr7 (166-250)||(46439539-46439623)
chr7 (230-301)||(4322562-4322633)
chr7 (238-317)||(23906235-23906314)
chr7 (171-282)||(35691431-35691542)
chr7 (167-282)||(38549547-38549662)
chr7 (167-286)||(45361246-45361365)
chr7 (325-379)||(23906132-23906186)
chr7 (167-228)||(23906295-23906356)
chr7 (213-290)||(23953851-23953928)
chr7 (217-290)||(27955420-27955493)
chr7 (213-286)||(35344295-35344368)
chr7 (204-269)||(38614933-38614998)
chr7 (232-301)||(48303639-48303708)
chr7 (217-269)||(38613503-38613555)
chr7 (166-286)||(46437106-46437226)
chr7 (317-377)||(46439403-46439463)
[»] chr6 (36 HSPs)
chr6 (167-391)||(32455791-32456015)
chr6 (181-391)||(3456762-3456972)
chr6 (167-315)||(13613558-13613706)
chr6 (167-317)||(32439065-32439215)
chr6 (167-286)||(3480627-3480746)
chr6 (167-286)||(32454248-32454367)
chr6 (166-286)||(32518467-32518587)
chr6 (186-317)||(20523385-20523516)
chr6 (167-316)||(32516877-32517026)
chr6 (185-317)||(10568417-10568549)
chr6 (189-316)||(7372933-7373060)
chr6 (168-317)||(11355223-11355372)
chr6 (315-391)||(13613441-13613517)
chr6 (166-286)||(18645074-18645193)
chr6 (167-286)||(13610690-13610808)
chr6 (167-317)||(6899485-6899635)
chr6 (166-286)||(11357164-11357284)
chr6 (220-318)||(9398713-9398811)
chr6 (166-287)||(10569888-10570009)
chr6 (167-256)||(9400035-9400124)
chr6 (166-286)||(6902868-6902987)
chr6 (238-317)||(7049828-7049907)
chr6 (213-290)||(3018433-3018510)
chr6 (213-301)||(17952032-17952120)
chr6 (167-235)||(32437140-32437208)
chr6 (317-379)||(9398851-9398913)
chr6 (185-314)||(14338452-14338581)
chr6 (213-273)||(2968185-2968245)
chr6 (167-286)||(20525304-20525423)
chr6 (317-379)||(11355413-11355475)
chr6 (317-379)||(20523557-20523619)
chr6 (230-292)||(35175862-35175924)
chr6 (189-238)||(7051263-7051312)
chr6 (167-236)||(7371175-7371244)
chr6 (242-291)||(30891199-30891248)
chr6 (170-286)||(21068628-21068744)
[»] chr2 (43 HSPs)
chr2 (167-391)||(37020508-37020732)
chr2 (167-391)||(6785901-6786125)
chr2 (167-391)||(24207971-24208186)
chr2 (18-154)||(3253946-3254082)
chr2 (167-286)||(37022155-37022274)
chr2 (167-317)||(39664742-39664892)
chr2 (167-286)||(24205598-24205717)
chr2 (167-293)||(16763076-16763202)
chr2 (167-256)||(6783364-6783453)
chr2 (167-286)||(2577450-2577569)
chr2 (167-317)||(40560223-40560373)
chr2 (167-317)||(2766934-2767084)
chr2 (167-317)||(14389078-14389228)
chr2 (166-286)||(14387348-14387468)
chr2 (171-317)||(42519199-42519346)
chr2 (167-317)||(44709739-44709889)
chr2 (166-317)||(19908240-19908392)
chr2 (167-286)||(16764581-16764700)
chr2 (170-318)||(17696209-17696357)
chr2 (167-315)||(39455169-39455317)
chr2 (167-286)||(16376736-16376855)
chr2 (185-286)||(19906700-19906801)
chr2 (167-286)||(39663154-39663273)
chr2 (167-286)||(40561848-40561967)
chr2 (203-316)||(16377192-16377305)
chr2 (213-301)||(11023003-11023091)
chr2 (189-292)||(6797529-6797632)
chr2 (166-279)||(19581413-19581526)
chr2 (231-317)||(361509-361595)
chr2 (216-290)||(29909661-29909735)
chr2 (230-291)||(11315335-11315396)
chr2 (217-290)||(37417323-37417396)
chr2 (185-318)||(37645505-37645638)
chr2 (213-289)||(26584819-26584895)
chr2 (186-286)||(39456750-39456850)
chr2 (317-379)||(6797698-6797760)
chr2 (170-228)||(6799436-6799494)
chr2 (317-379)||(14388975-14389037)
chr2 (317-379)||(40560414-40560476)
chr2 (208-273)||(15432369-15432434)
chr2 (167-236)||(34400314-34400383)
chr2 (230-290)||(39398-39458)
chr2 (213-301)||(28246709-28246797)
[»] chr1 (59 HSPs)
chr1 (166-391)||(9121568-9121793)
chr1 (166-391)||(47012982-47013207)
chr1 (245-387)||(1442599-1442741)
chr1 (167-315)||(46583532-46583680)
chr1 (170-315)||(33602620-33602765)
chr1 (167-317)||(4855940-4856090)
chr1 (167-286)||(9120039-9120158)
chr1 (166-317)||(34778112-34778263)
chr1 (165-318)||(2869577-2869730)
chr1 (185-379)||(51896056-51896258)
chr1 (167-286)||(47011456-47011575)
chr1 (167-317)||(25278342-25278492)
chr1 (161-286)||(46582004-46582129)
chr1 (167-286)||(37345932-37346051)
chr1 (167-317)||(27087283-27087433)
chr1 (167-317)||(31238469-31238619)
chr1 (167-317)||(37344342-37344492)
chr1 (167-256)||(26223587-26223676)
chr1 (166-286)||(1444151-1444271)
chr1 (166-310)||(50556078-50556222)
chr1 (167-256)||(34776569-34776658)
chr1 (167-311)||(6818658-6818802)
chr1 (166-286)||(8167941-8168061)
chr1 (167-286)||(8169538-8169657)
chr1 (167-286)||(25276742-25276861)
chr1 (167-314)||(3013447-3013600)
chr1 (167-256)||(4854410-4854499)
chr1 (315-391)||(33602503-33602579)
chr1 (167-286)||(31236819-31236938)
chr1 (315-389)||(46583417-46583491)
chr1 (213-317)||(15104487-15104591)
chr1 (167-286)||(27089249-27089368)
chr1 (185-284)||(33599236-33599335)
chr1 (167-269)||(25278975-25279077)
chr1 (168-282)||(50554164-50554278)
chr1 (168-228)||(1442551-1442611)
chr1 (166-286)||(2871046-2871166)
chr1 (170-286)||(3011858-3011974)
chr1 (168-228)||(6816866-6816926)
chr1 (188-286)||(51894588-51894686)
chr1 (217-290)||(42134532-42134605)
chr1 (161-286)||(52641882-52642007)
chr1 (230-301)||(5783427-5783498)
chr1 (167-286)||(37088106-37088225)
chr1 (170-257)||(52643649-52643736)
chr1 (208-290)||(36895511-36895593)
chr1 (217-273)||(18183961-18184017)
chr1 (167-247)||(25278854-25278934)
chr1 (167-227)||(45044949-45045009)
chr1 (317-388)||(15104632-15104703)
chr1 (317-379)||(3013341-3013403)
chr1 (208-286)||(27940649-27940727)
chr1 (317-379)||(31238366-31238428)
chr1 (208-290)||(31801674-31801756)
chr1 (166-228)||(33599186-33599248)
chr1 (317-379)||(34778010-34778072)
chr1 (217-290)||(46638808-46638881)
chr1 (317-377)||(25278241-25278301)
chr1 (317-377)||(37344533-37344593)
[»] chr8 (64 HSPs)
chr8 (167-391)||(27406817-27407041)
chr8 (177-389)||(15305807-15306019)
chr8 (177-389)||(15486176-15486388)
chr8 (167-315)||(27691154-27691302)
chr8 (167-315)||(33708800-33708947)
chr8 (166-317)||(13282477-13282628)
chr8 (167-317)||(8609781-8609931)
chr8 (167-317)||(13108330-13108480)
chr8 (167-286)||(35509214-35509333)
chr8 (167-317)||(38547228-38547378)
chr8 (167-256)||(15308261-15308350)
chr8 (167-256)||(15488630-15488719)
chr8 (167-256)||(29237151-29237240)
chr8 (166-286)||(601674-601794)
chr8 (170-317)||(42941777-42941924)
chr8 (168-286)||(33707207-33707325)
chr8 (167-286)||(33762683-33762802)
chr8 (167-286)||(35510789-35510908)
chr8 (170-317)||(41825638-41825785)
chr8 (167-317)||(13486093-13486243)
chr8 (166-256)||(29239187-29239277)
chr8 (167-286)||(8608237-8608357)
chr8 (167-316)||(22272334-22272485)
chr8 (315-391)||(33708683-33708759)
chr8 (185-317)||(41042578-41042710)
chr8 (167-286)||(27692807-27692926)
chr8 (167-286)||(33761069-33761188)
chr8 (167-286)||(38548801-38548920)
chr8 (167-286)||(42943396-42943515)
chr8 (170-256)||(27404213-27404299)
chr8 (315-391)||(27691343-27691419)
chr8 (166-317)||(7745106-7745257)
chr8 (167-256)||(13106804-13106893)
chr8 (185-286)||(13283965-13284066)
chr8 (188-317)||(26242308-26242437)
chr8 (168-291)||(5036446-5036569)
chr8 (166-286)||(22273861-22273981)
chr8 (167-286)||(26238726-26238845)
chr8 (213-317)||(9673159-9673263)
chr8 (167-286)||(5038032-5038150)
chr8 (167-248)||(34681074-34681155)
chr8 (208-290)||(31821459-31821541)
chr8 (230-290)||(37526024-37526084)
chr8 (213-301)||(40020625-40020713)
chr8 (166-286)||(41823889-41824009)
chr8 (317-379)||(5036640-5036702)
chr8 (230-291)||(9184446-9184507)
chr8 (213-290)||(11788367-11788444)
chr8 (213-290)||(33750385-33750462)
chr8 (213-290)||(42897775-42897852)
chr8 (317-394)||(42941965-42942042)
chr8 (213-301)||(28433706-28433794)
chr8 (185-256)||(9671995-9672066)
chr8 (317-388)||(9673047-9673118)
chr8 (231-314)||(40339677-40339760)
chr8 (317-379)||(13108228-13108290)
chr8 (317-379)||(38547418-38547480)
chr8 (317-379)||(40339571-40339633)
chr8 (317-379)||(41042475-41042537)
chr8 (166-235)||(13484544-13484613)
chr8 (213-286)||(31201148-31201221)
chr8 (317-377)||(8609681-8609741)
chr8 (230-286)||(9186617-9186673)
chr8 (321-377)||(13485992-13486048)
[»] scaffold0058 (5 HSPs)
scaffold0058 (167-315)||(3294-3442)
scaffold0058 (167-315)||(4466-4614)
scaffold0058 (167-286)||(14313-14432)
scaffold0058 (315-391)||(3483-3559)
scaffold0058 (315-391)||(4655-4731)
[»] chr4 (51 HSPs)
chr4 (167-315)||(43519424-43519572)
chr4 (167-286)||(835012-835131)
chr4 (166-317)||(51011925-51012076)
chr4 (167-286)||(833223-833342)
chr4 (167-286)||(4173710-4173829)
chr4 (167-286)||(5439617-5439736)
chr4 (167-286)||(43507167-43507286)
chr4 (167-286)||(43508623-43508742)
chr4 (166-286)||(4169685-4169805)
chr4 (167-286)||(319273-319392)
chr4 (167-286)||(5437811-5437930)
chr4 (167-286)||(33264382-33264501)
chr4 (170-317)||(41761720-41761867)
chr4 (168-315)||(49523125-49523272)
chr4 (167-286)||(51013856-51013975)
chr4 (167-317)||(41781539-41781689)
chr4 (167-286)||(33265980-33266099)
chr4 (315-391)||(43519613-43519689)
chr4 (167-286)||(35401749-35401868)
chr4 (167-286)||(49524703-49524822)
chr4 (170-286)||(39345567-39345683)
chr4 (167-286)||(320870-320989)
chr4 (188-317)||(35404419-35404548)
chr4 (216-317)||(42980684-42980785)
chr4 (213-301)||(39083685-39083773)
chr4 (188-256)||(43521109-43521177)
chr4 (166-286)||(48645254-48645374)
chr4 (167-286)||(20493827-20493946)
chr4 (317-379)||(11255811-11255873)
chr4 (213-303)||(39189428-39189518)
chr4 (167-317)||(48813787-48813937)
chr4 (213-301)||(5484586-5484674)
chr4 (213-301)||(39921540-39921628)
chr4 (213-301)||(43779857-43779945)
chr4 (213-317)||(48646721-48646825)
chr4 (183-286)||(44794765-44794868)
chr4 (186-273)||(52868167-52868254)
chr4 (208-290)||(35996104-35996186)
chr4 (188-289)||(11601692-11601792)
chr4 (217-290)||(44558494-44558567)
chr4 (317-394)||(51012116-51012193)
chr4 (213-301)||(32652145-32652233)
chr4 (186-286)||(42982422-42982522)
chr4 (213-301)||(44994277-44994365)
chr4 (231-290)||(2827468-2827527)
chr4 (230-273)||(27624869-27624912)
chr4 (213-291)||(13450980-13451058)
chr4 (317-371)||(35404324-35404378)
chr4 (208-286)||(47941852-47941930)
chr4 (214-283)||(230483-230552)
chr4 (321-377)||(42980830-42980886)
[»] chr3 (71 HSPs)
chr3 (167-315)||(3152214-3152362)
chr3 (167-315)||(44794208-44794355)
chr3 (176-315)||(2660221-2660360)
chr3 (165-317)||(53190753-53190905)
chr3 (208-315)||(19987590-19987697)
chr3 (167-317)||(41977750-41977900)
chr3 (167-286)||(28626411-28626530)
chr3 (167-286)||(53187742-53187861)
chr3 (166-284)||(3150251-3150369)
chr3 (167-317)||(21348723-21348873)
chr3 (167-317)||(27899075-27899225)
chr3 (167-301)||(54898437-54898571)
chr3 (186-317)||(35905706-35905837)
chr3 (167-286)||(46308807-46308926)
chr3 (167-317)||(2226146-2226296)
chr3 (167-317)||(51684610-51684760)
chr3 (166-286)||(38193480-38193600)
chr3 (166-286)||(46310406-46310526)
chr3 (167-286)||(46611273-46611392)
chr3 (167-286)||(53094243-53094362)
chr3 (167-286)||(54900044-54900163)
chr3 (167-256)||(41979352-41979441)
chr3 (169-317)||(43765139-43765287)
chr3 (167-286)||(38191895-38192014)
chr3 (167-282)||(46609149-46609264)
chr3 (315-391)||(2660401-2660477)
chr3 (176-284)||(2661880-2661988)
chr3 (315-391)||(44794396-44794472)
chr3 (166-317)||(17515309-17515460)
chr3 (168-286)||(2378953-2379071)
chr3 (167-317)||(23293164-23293314)
chr3 (167-317)||(30599912-30600062)
chr3 (166-286)||(23291569-23291689)
chr3 (167-286)||(53092623-53092742)
chr3 (166-292)||(46112486-46112612)
chr3 (167-256)||(35903825-35903914)
chr3 (167-256)||(44795890-44795979)
chr3 (166-286)||(611192-611312)
chr3 (315-388)||(19987479-19987552)
chr3 (170-317)||(42279510-42279657)
chr3 (167-286)||(7883328-7883447)
chr3 (170-284)||(54412519-54412633)
chr3 (189-317)||(2377051-2377179)
chr3 (315-375)||(3152113-3152173)
chr3 (167-286)||(30598337-30598456)
chr3 (213-283)||(23774198-23774268)
chr3 (208-290)||(48633918-48634000)
chr3 (197-314)||(46197750-46197867)
chr3 (170-286)||(42282443-42282559)
chr3 (223-290)||(25535250-25535317)
chr3 (167-286)||(44267981-44268100)
chr3 (245-311)||(7884873-7884939)
chr3 (317-379)||(23293061-23293123)
chr3 (213-291)||(23888772-23888850)
chr3 (317-379)||(30599809-30599871)
chr3 (317-379)||(35905604-35905666)
chr3 (317-379)||(44276087-44276149)
chr3 (216-290)||(45898349-45898423)
chr3 (167-228)||(7884927-7884988)
chr3 (225-290)||(23876979-23877044)
chr3 (213-290)||(40508912-40508989)
chr3 (317-377)||(43765328-43765388)
chr3 (221-317)||(48830800-48830896)
chr3 (242-317)||(44276190-44276265)
chr3 (317-379)||(17515501-17515563)
chr3 (217-287)||(33113184-33113254)
chr3 (317-379)||(54898627-54898689)
chr3 (167-247)||(600725-600805)
chr3 (230-290)||(31887453-31887513)
chr3 (208-256)||(41147862-41147910)
chr3 (167-283)||(51686367-51686483)
[»] scaffold0081 (1 HSPs)
scaffold0081 (167-286)||(54228-54347)
[»] scaffold1712 (1 HSPs)
scaffold1712 (167-286)||(982-1101)
[»] scaffold1454 (1 HSPs)
scaffold1454 (185-311)||(1281-1407)
[»] scaffold0345 (1 HSPs)
scaffold0345 (166-286)||(1525-1645)
[»] scaffold0564 (2 HSPs)
scaffold0564 (317-379)||(8451-8513)
scaffold0564 (169-273)||(8264-8366)
[»] scaffold0024 (1 HSPs)
scaffold0024 (320-376)||(37398-37454)


Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 166 - 391
Target Start/End: Complemental strand, 29621906 - 29621681
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29621906 agactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 29621807  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgata 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  29621806 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgata 29621707  T
Q  366 tttaacatttcagtctcttttttcct 391  Q
    ||||||||||||||||||||||||||    
T  29621706 tttaacatttcagtctcttttttcct 29621681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 170 - 391
Target Start/End: Original strand, 40780553 - 40780774
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  270 caaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatattta 369  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||||||||    
T  40780653 caaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtgtcagccacgtgtacagggactaaactgatggaaattgtcaaaatttgatattta 40780752  T
Q  370 acatttcagtctcttttttcct 391  Q
    ||||||||||||||||||||||    
T  40780753 acatttcagtctcttttttcct 40780774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 167 - 391
Target Start/End: Complemental strand, 42473731 - 42473507
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  42473731 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtc 42473632  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatat 366  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || | |     
T  42473631 catcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaatggtcaaaattcaaaaa 42473532  T
Q  367 ttaacatttcagtctcttttttcct 391  Q
    ||||||||||||| || ||||||||    
T  42473531 ttaacatttcagtttcatttttcct 42473507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 166 - 315
Target Start/End: Complemental strand, 2854451 - 2854303
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  2854451 agactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgt 2854353  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||| |||||  |||||||||||||||| |||| |||||||||||||||||    
T  2854352 ccaacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgtg 2854303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 167 - 315
Target Start/End: Complemental strand, 24541336 - 24541187
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| ||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 24541237  T
Q  267 catcaaa-tcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||| |||   ||||||||||||| |||  |||||||||||||||||    
T  24541236 catcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgtg 24541187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 318
Target Start/End: Complemental strand, 36057737 - 36057586
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  ||| |||||||||||||||| ||||||||| | |||| ||||||||||| ||||||||    
T  36057737 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtc 36057638  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtca 318  Q
    |||||||   ||||||||||||||||  ||||||||| ||||||||||||||    
T  36057637 catcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgtgtca 36057586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 17574318 - 17574468
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| |||||||||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 17574417  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| |||||    
T  17574418 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 17574468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 40782300 - 40782181
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 40782201  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  40782200 aatcaaattagtccctccgt 40782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 2852885 - 2853005
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||   | | ||    
T  2852885 agactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgt 2852984  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  2852985 caatcaaatcagtccctccgt 2853005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 29620138 - 29620257
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||   | | |||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtc 29620237  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  29620238 aatcaaattagtccctccgt 29620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 7267843 - 7267993
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| |||||| ||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  7267843 gactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtc 7267942  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||    |||||||||||||||  ||||||| | ||||||| |||||    
T  7267943 catcaaaatgatccctccgtccaaaagctccgttagtggtgatgacgtgtc 7267993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 2179786 - 2179912
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | |||||||||||||||||||||| |||| ||||||||||||||||  |||||||| | ||| |||||||||||| ||||| |    
T  2179786 agactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacat 2179885  T
Q  266 ccatcaaatcagtccctccgtccaaaa 292  Q
    ||||||||   ||||||||||||||||    
T  2179886 ccatcaaaatggtccctccgtccaaaa 2179912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 21843082 - 21842962
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| |||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||   | | ||    
T  21843082 agactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 21842983  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  21842982 caatcaaatcagtccctccgt 21842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 185 - 317
Target Start/End: Complemental strand, 30468386 - 30468254
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    |||||||||||||||||||| | |||| |||||| || |||||| ||||||||| | ||||||| |||||||| |||||||||||||||   ||||||||    
T  30468386 gtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctcc 30468287  T
Q  285 gtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||||  ||||||| | ||||||| |||||    
T  30468286 gtccaaaagctccgttagtggtgatgacgtgtc 30468254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 34327634 - 34327785
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | |||||||||||||  ||||| |  ||| |||||| ||||||||| ||||||||| | |||||||||||||||| |||||||    
T  34327634 agactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgt 34327733  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||||   ||| ||||||||||||  || |||| | |||||||||||||    
T  34327734 ccatcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgtgtc 34327785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 301
Target Start/End: Original strand, 8539675 - 8539809
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||| ||||| ||||| | |||||||| ||||||||| | |||||||||||||||| || |||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 8539774  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    |||||||  |||| |||| |||||||  |||||||    
T  8539775 catcaaaatagtcgctccatccaaaagctccgtta 8539809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 166 - 256
Target Start/End: Original strand, 42471547 - 42471637
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    ||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||| |||| | |||||||    
T  42471547 agactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacatgaattt 42471637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 7269535 - 7269446
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | ||| ||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7269535 gactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | |||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 12738825 - 12738706
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12738726  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  12738725 aatcaaatcagtccctccgt 12738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 12801648 - 12801529
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12801549  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  12801548 aatcaaatcagtccctccgt 12801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 315 - 394
Target Start/End: Complemental strand, 24541146 - 24541067
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcctatg 394  Q
    ||||||||| |||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  24541146 gtcagccacatgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcagtcttttttttcctatg 24541067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 8541360 - 8541241
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| ||||||||||||||||||  ||| |||||||||||||||| ||||||||| | ||||||| |||||||   | | |||    
T  8541360 gactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtc 8541261  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  8541260 aatcaaatcagtccctccgt 8541241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 379
Target Start/End: Complemental strand, 2854263 - 2854199
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||    
T  2854263 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcagt 2854199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 18625086 - 18624982
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgat 312  Q
    ||||||||||||||||  |||||||| | |||||||||||||||| ||  |||||||||||   |||| |||||||||||  ||||||| ||||||||||    
T  18625086 ttcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttagtagtgatgat 18624987  T
Q  313 gtgtc 317  Q
    |||||    
T  18624986 gtgtc 18624982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 32087551 - 32087637
Alignment:
Q  204 tcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||||||| ||||||||| |||| | ||||||||||| ||||||||| |||||| |||||||||||||||   ||||||||||||||    
T  32087551 tcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtccaa 32087637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 286
Target Start/End: Complemental strand, 17578022 - 17577905
Alignment:
Q  169 ctaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcca 268  Q
    |||||| |||||| | ||||||||||||| ||||||||  | ||||| |||||||||||| | ||||||||||||||| | |||||||   | | ||| |    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaa 17577923  T
Q  269 tcaaatcagtccctccgt 286  Q
    ||||||||||||||||||    
T  17577922 tcaaatcagtccctccgt 17577905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 18728680 - 18728603
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   ||||||||||||||    
T  18728680 ttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 18728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 286
Target Start/End: Complemental strand, 28822176 - 28822060
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | ||||||||||||| |||||| | |||| |||||||||||||||| ||||||  | | || |||| |||||||   | | ||| ||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaat 28822077  T
Q  270 caaatcagtccctccgt 286  Q
    |||||||||||||||||    
T  28822076 caaatcagtccctccgt 28822060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 34328917 - 34328797
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| |||||||| |||| ||||||| |||||||| | ||||| | | || |||| |||||||   | | ||    
T  34328917 agactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaatgt 34328818  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||| ||||||    
T  34328817 caatcaaatcagtcgctccgt 34328797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 27075876 - 27075927
Alignment:
Q  223 aatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaat 274  Q
    |||||||| ||||||||||||||| |||||||||  ||||||||||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaat 27075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 28813856 - 28813735
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaa--tcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacg 264  Q
    |||||||| |||||| | |||||||||||| ||||||  | |  ||| ||||||| |||||||| ||||||||| | |||||||||||||||   | | |    
T  28813856 gactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatttacaaaatg 28813757  T
Q  265 tccatcaaatcagtccctccgt 286  Q
    |  |||||||||||||||||||    
T  28813756 taaatcaaatcagtccctccgt 28813735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 35395379 - 35395456
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||| |||| | ||||||||||| ||||| |||||||||   ||||||||||||||   ||||||||||||||    
T  35395379 ttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaaggtccctccgtccaa 35395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 43318134 - 43318061
Alignment:
Q  217 tccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||| |||| | ||||||||||| |||||||||||||||  ||||||||||| |||   ||||||||||||||    
T  43318134 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggtccctccgtccaa 43318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 7268033 - 7268093
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttca 377  Q
    |||||||||||||||| |||||| ||||||||||||| |||| |||| | ||||| |||||    
T  7268033 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgaaacttaacttttca 7268093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 38596914 - 38596974
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 273  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||   ||||||||||||||    
T  38596914 ttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaa 38596974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 32135779 - 32135720
Alignment:
Q  320 ccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    ||||||||||||| |||||| |||||||||| || |||| |||| ||||||| |||||||    
T  32135779 ccacgtgtacaaggactaaattgatggaaatagtaaaaattcgagatttaacttttcagt 32135720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 376
Target Start/End: Original strand, 34327826 - 34327885
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttc 376  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| ||||||| ||||    
T  34327826 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttc 34327885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 8539866 - 8539928
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    ||||||||||| |||| |||||| |||||||||| || |||| |||| ||||||| |||||||    
T  8539866 cagccacgtgtgcaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagt 8539928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 17574508 - 17574570
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| | ||||| |||||||    
T  17574508 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagt 17574570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 32134231 - 32134320
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | ||| ||||||||| ||||||| | ||| ||||||  ||||||||   ||||||| | |||||||||||||||    
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 35292443 - 35292382
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 291  Q
    ||||||||||| |||||||||||||||  ||||||||||| |||   || ||||||||||||    
T  35292443 cgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggttcctccgtccaaa 35292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 43492197 - 43492132
Alignment:
Q  192 aattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 257  Q
    |||||| |||||||   ||| ||| |||||||||||| ||||||||| | ||||||||||||||||    
T  43492197 aattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttt 43492132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 388
Target Start/End: Complemental strand, 18624938 - 18624870
Alignment:
Q  320 ccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctctttttt 388  Q
    ||||||||||||| |||||  |||||||||| || |||| |||| ||||||| ||||||| || |||||    
T  18624938 ccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtcattttt 18624870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 21841182 - 21841242
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttca 377  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| | ||||| |||||    
T  21841182 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttca 21841242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 33256463 - 33256523
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||||| ||| ||  |||||||  |||||||||||||||  |||||||||||||||    
T  33256463 cgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaagtccctccgtccaa 33256523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 167 - 391
Target Start/End: Original strand, 20478042 - 20478266
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatat 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  20478142 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatat 20478241  T
Q  367 ttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||||||||||||    
T  20478242 ttaacatttcagtctcttttttcct 20478266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 167 - 315
Target Start/End: Complemental strand, 27666189 - 27666041
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 27666090  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  27666089 catcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgtg 27666041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 167 - 315
Target Start/End: Original strand, 56330 - 56478
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    |||||| ||| ||||||||||||||||||| |||| |||||||||||||    
T  56430 catcaattcactccctccgtccaaaatgtctgttagtagtgatgatgtg 56478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 29996638 - 29996494
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  29996638 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtc 29996539  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatga 311  Q
    ||||||||  |||||||| ||||||| ||||||||||||||||||    
T  29996538 catcaaattcgtccctccatccaaaaggtccgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 20479808 - 20479689
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  20479808 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 20479709  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  20479708 aatcaaattagtccctccgt 20479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 165 - 317
Target Start/End: Complemental strand, 37115652 - 37115500
Alignment:
Q  165 gagactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacg 264  Q
    |||||||||| |||||| | ||| |||||||||||||||||  |||| ||||| |||||||||| | ||||||| | ||||| |||||||||| ||||||    
T  37115652 gagactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacg 37115553  T
Q  265 tccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||||  |||||||||||||||||  ||||||| | |||||||||||||    
T  37115552 tccatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtc 37115500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 35403708 - 35403589
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35403609  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  35403608 aatcaaatcagtccctccgt 35403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 35401968 - 35402088
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    |||||||||||||||| | ||||||||||||| ||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||    
T  35401968 agactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 35402067  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  35402068 caatcaaatcagtccctccgt 35402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 39859354 - 39859203
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||||||||||||  ||| || ||||||||||||| ||||||||| | ||||||| |||||||| |||||||    
T  39859354 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 39859255  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    || |||||   ||||||||||||||||  ||||||| | ||||||| |||||    
T  39859254 ccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 39859203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 38474267 - 38474117
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| ||||||| ||||||| |||||||| |||| |||||||||||||||| ||||||||| | ||||||| |||||||| |||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
     ||||||   |||| |||||||||||  ||||||| | |||||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgtgtc 38474117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 27666000 - 27665924
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27666000 gtcagccacgtgtacaaggactaaattgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcct 27665924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 27664433 - 27664549
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| ||||||||||||||| ||||||||  |||||| ||||||||||||| | |||||||||||||||||||||||||   | | ||| ||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaat 27664532  T
Q  270 caaatcagtccctccgt 286  Q
    |||||||||||||||||    
T  27664533 caaatcagtccctccgt 27664549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 45359336 - 45359486
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| || ||| | |||| ||||||||||||||||| |||| | ||||| |||||||| ||||||||| | ||||||| |||||||| ||||||||    
T  45359336 gactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtc 45359435  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   |||||||| |||||||  ||||||| | ||||||| |||||    
T  45359436 catcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtc 45359486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 188 - 317
Target Start/End: Complemental strand, 24228512 - 24228383
Alignment:
Q  188 cttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtc 287  Q
    ||||||||||||||||| |  ||| |||||||||||||||| ||||||||| | |||||| ||||||||| |||||||||||||||   |||||| ||||    
T  24228512 cttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtcccttcgtc 24228413  T
Q  288 caaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||  ||| ||| | |||||||||||||    
T  24228412 caaaagctccattagtggtgatgatgtgtc 24228383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 6602335 - 6602479
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | | ||||||||||||||||||||   ||  |  |||||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  6602335 gactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 6602434  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatga 311  Q
    |||||||   ||||||||||||||||  ||||||| | |||||||    
T  6602435 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 39857648 - 39857764
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | |||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | |||||||| ||||||   | | ||| ||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaat 39857747  T
Q  270 caaatcagtccctccgt 286  Q
    |||||||||||||||||    
T  39857748 caaatcagtccctccgt 39857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 30940549 - 30940399
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| || ||| | || |||||||||||||||||||  ||| |||||| || |||||| ||||||||| | |||||||||||||||| || ||||     
T  30940549 gactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgtt 30940450  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||| ||||||||||||  ||||||| | |||||||||||||    
T  30940449 catcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgtgtc 30940399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 167 - 316
Target Start/End: Complemental strand, 47386333 - 47386184
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||| ||||||||||||||  |||| ||||||| |||||||| ||||||||  | |||||| || |||||| ||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtc 47386234  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgt 316  Q
    |||||||   |||  |||||||||||  ||||||| | ||||||||||||    
T  47386233 catcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgtgt 47386184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 37113940 - 37114060
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | |||||||||||||||||||| | |||| ||| |||||||||||| ||||||||| | ||||||||| |||||   | | ||    
T  37113940 agactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaaatgt 37114039  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  37114040 caatcaaatcagtccctccgt 37114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 78103 - 77984
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| ||||||||| ||||||||  |||||||||||||||||||| | |||||||||||| ||||||||||||   | | | |    
T  78103 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgcc 78004  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  78003 aatcaaatcagtccctccgt 77984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 13169772 - 13169653
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  ||| || ||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 13169673  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  13169672 aatcaaatcagtccctccgt 13169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 29996448 - 29996373
Alignment:
Q  316 tcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||| |||||||||||| |||||| |||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  29996448 tcagtcacgtgtacaaggactaaattgatggaaatggtcaaaattcaatatttaacatttcagtctcttttttcct 29996373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 170 - 301
Target Start/End: Complemental strand, 34777036 - 34776905
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | || ||| ||||||||||||| |  ||| ||| | |||||||||| ||||||||| | |||||||||||||||| |||||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  270 caaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||   ||||||||||||||||  |||||||    
T  34776936 caaaatggtccctccgtccaaaaactccgtta 34776905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 318
Target Start/End: Original strand, 13168142 - 13168274
Alignment:
Q  189 ttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtc---cctgaattttgcagacgtccatcaaatcagtccctccg 285  Q
    ||||||||||||||||||  ||| ||||||| |||||||| ||||||||| | ||||||   |||||||||| |||||||||||||||   |||| ||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  286 tccaaaatgtccgttaatagtgatgatgtgtca 318  Q
    |||||||  ||||||| | ||||||| ||||||    
T  13168242 tccaaaagctccgttagtggtgatgacgtgtca 13168274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 56519 - 56594
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    ||||||||||||||  || |||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  56519 gtcagccacgtgtaagag-actaaattgatggaaatggtcaaaattcgatatttaacatttcagtctcttttttcct 56594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 37796302 - 37796183
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | ||||||||||||| |||||||   ||| |||||||   |||||| ||||||||| | |||||||||||||||| | |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  270 caaatcagtccctccgtcca 289  Q
    ||||  ||||||||||||||    
T  37796202 caaaatagtccctccgtcca 37796183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 23904583 - 23904700
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| |||||| ||||||||| | ||||| | | ||||||| |||||||   | | |||    
T  23904583 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgtc 23904682  T
Q  267 catcaaatcagtccctcc 284  Q
     |||||||||||||||||    
T  23904683 aatcaaatcagtccctcc 23904700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 47384293 - 47384413
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| ||||||    ||| ||||||| |||||||| ||||||||| |||||||||| ||||||   | | ||    
T  47384293 agactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgt 47384392  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  47384393 caatcaaatcagtccctccgt 47384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 13039713 - 13039618
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtcc 280  Q
    ||||||||||||| ||||||| ||||| ||||||||| |||||| ||||||| | | ||||||||||||||||  | | ||| |||||||||||||    
T  13039713 gtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatcagtcc 13039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    ||||| |||||| | |||||||||||||||||||||| |||| || || |||||||||| ||||||| | | |||||||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 33038880 - 33038798
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||| ||| ||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||   ||||||||||||||    
T  33038880 tcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaaggtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 48228027 - 48227913
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | ||| |||||||||||||||||| |||| ||||||  |||||||| ||||||||| | || ||||||||||||   | | ||| ||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaat 48227928  T
Q  270 caaatcagtccctcc 284  Q
    |||||||||||||||    
T  48227927 caaatcagtccctcc 48227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 34774997 - 34775117
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    |||||||||||||||| | ||| |||||||||||||||||| |||| ||| | | |||||||| | ||||| | | |||||||||||||||   | |  |    
T  34774997 agactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatttacaaaatat 34775096  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  34775097 caatcaaatcagtccctccgt 34775117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 35693455 - 35693344
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatca--aattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatag 305  Q
    |||| ||||||| |||||||| || ||||||   |||||||||||||||||| |||||||||||||||   |||||||| |||||||  || |||| | |    
T  35693455 tcaaattcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtgg 35693356  T
Q  306 tgatgatgtgtc 317  Q
    ||||||||||||    
T  35693355 tgatgatgtgtc 35693344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 45463716 - 45463804
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||||||||    
T  45463716 ttcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 45463804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 366747 - 366821
Alignment:
Q  216 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||||| | ||||| ||||||||||||||||||||||||||  |||||||| |||||||   |||||||||||||    
T  366747 gtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtccaa 366821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 168 - 286
Target Start/End: Original strand, 24226582 - 24226700
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 267  Q
    ||||||| |||||| | ||||||||||||| ||||||||  ||| ||||||| |||||||| ||||||| | | || |||| |||||||   | | |||     
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtca 24226681  T
Q  268 atcaaatcagtccctccgt 286  Q
    |||||||||||||||||||    
T  24226682 atcaaatcagtccctccgt 24226700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 47386142 - 47386080
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| ||||||||||||| |||| |||| ||||||| |||||||    
T  47386142 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcagt 47386080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 46996780 - 46996703
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||   ||||||||||||||    
T  46996780 ttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 46996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 7401949 - 7402000
Alignment:
Q  223 aatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaat 274  Q
    ||||| ||||||||||||||| ||||||||||||  ||||||||||||||||    
T  7401949 aatttatcgaaatatcaaattcgtccctgaatttaacagacgtccatcaaat 7402000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaattt 227  Q
    ||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 376
Target Start/End: Complemental strand, 30940358 - 30940299
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttc 376  Q
    |||||||||||||||| |||||| ||||||||||||| |||| |||| ||||||| ||||    
T  30940358 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttc 30940299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 2167520 - 2167602
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||| ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||| ||||||||   ||||||||||||||    
T  2167520 tcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtccaa 2167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 22155918 - 22155817
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    ||||||||||||| ||||||||  ||| ||||||| |||||||| | ||||| | | || ||||||||||||   | | ||| |||||||||||||||||    
T  22155918 gtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtcaatcaaatcagtccctcc 22155819  T
Q  285 gt 286  Q
    ||    
T  22155818 gt 22155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 22211833 - 22211732
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    ||||||||||||| ||||||||  ||| ||||||| |||||||| | ||||| | | || ||||||||||||   | | ||| |||||||||||||||||    
T  22211833 gtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtcaatcaaatcagtccctcc 22211734  T
Q  285 gt 286  Q
    ||    
T  22211733 gt 22211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 11682828 - 11682904
Alignment:
Q  214 tcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||||||| |||| | | ||||||||||||||||| ||||||    ||||||||||||| | |||||||||||||||    
T  11682828 tcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtccaa 11682904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 46439623 - 46439539
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccct 250  Q
    |||||||||||||||| | ||| ||||||||| |||||||||||||  | |||  | |||||| ||||||||| | |||||||||    
T  46439623 agactaatatctcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtccct 46439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 4322633 - 4322562
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    |||||||||||| ||||||||||||||    ||| |||||||| |  |||||||||||||||| ||||||||    
T  4322633 cgaaatatcaaaatagtccctgaatttgtttgacatccatcaatttcgtccctccgtccaaaaggtccgtta 4322562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 317
Target Start/End: Complemental strand, 23906314 - 23906235
Alignment:
Q  238 caaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||| |||||| |||||| ||| |||||||||||   ||||||||||||||||  ||||||||| | ||||| |||||    
T  23906314 caaattcgtccctaaattttacagtcgtccatcaaaatggtccctccgtccaaaagctccgttaatggcgatgacgtgtc 23906235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 35691431 - 35691542
Alignment:
Q  171 aatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatc 270  Q
    |||| |||||| | ||||||||||||| |||||||| |||| |||||| || |||||| ||||||| | | || |||| |||||||   | | ||| |||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 35691530  T
Q  271 aaatcagtccct 282  Q
    ||||||||||||    
T  35691531 aaatcagtccct 35691542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 38549547 - 38549662
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| || ||| | ||||||||||||| |||||||   ||| ||||||||||||||||  |||||||| | ||| |||  ||||||   | | |||    
T  38549547 gactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgtc 38549646  T
Q  267 catcaaatcagtccct 282  Q
    ||||||||||||||||    
T  38549647 catcaaatcagtccct 38549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 45361365 - 45361246
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| |  ||||||||||||||||||| | ||||||| || |||||||||| | |||||   | ||||||| |||| ||   | | |||    
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaacttacaaaatgtc 45361266  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  45361265 aatcaaatcagtccctccgt 45361246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 23906186 - 23906132
Alignment:
Q  325 tgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||| |||||| ||||||||||||| |||| |||| ||||||| |||||||    
T  23906186 tgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcagt 23906132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 23906356 - 23906295
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttt 228  Q
    |||||||| |||||| |  |||||||||||||||||||||  ||| ||||||||| ||||||    
T  23906356 gactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 23953851 - 23953928
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||| | |||| | ||||||||||| ||||||| |||||||  |||||||| ||||||   ||||||||||||||    
T  23953851 ttcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaaggtccctccgtccaa 23953928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 27955420 - 27955493
Alignment:
Q  217 tccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||| |||||| ||||||||||| ||| |  ||||||||  |||||||||||||||   ||||||||||||||    
T  27955420 tccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagaggtccctccgtccaa 27955493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 35344368 - 35344295
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 286  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||||   ||||||||||    
T  35344368 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 38614998 - 38614933
Alignment:
Q  204 tcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    |||||||| ||| ||||| |||| | |||||||| || |||||||||||||||  |||||||||||    
T  38614998 tcgatcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgtcagacgtccat 38614933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 48303708 - 48303639
Alignment:
Q  232 aaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    |||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||| ||||    
T  48303708 aaatatcaaaatagtccctgaatttatttgacgtccatcaatttcgtccctccgtccaaaaggtctgtta 48303639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 38613555 - 38613503
Alignment:
Q  217 tccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||    
T  38613555 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 38613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 46437106 - 46437226
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| |||||||   ||| ||||||  |||||||| ||||||| | | || |||| |||||||   | | ||    
T  46437106 agactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaatttacaaaatgt 46437205  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | | |||||||||||||||||    
T  46437206 caaccaaatcagtccctccgt 46437226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 377
Target Start/End: Complemental strand, 46439463 - 46439403
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttca 377  Q
    |||||||||||||| | |||||| |||||||||| || |||| |||| ||||||| |||||    
T  46439463 cagccacgtgtacatggactaaattgatggaaatggtaaaaattcgagatttaacttttca 46439403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 167 - 391
Target Start/End: Complemental strand, 32456015 - 32455791
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32456015 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtc 32455916  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatat 366  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||    
T  32455915 catcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgtgtcagccacgtgtacaaggactaaactgatggaaattatcaaaattcgatat 32455816  T
Q  367 ttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||||||||||||    
T  32455815 ttaacatttcagtctcttttttcct 32455791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 181 - 391
Target Start/End: Original strand, 3456762 - 3456972
Alignment:
Q  181 aatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtcc 280  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3456762 aatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtcc 3456861  T
Q  281 ctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtc 380  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  3456862 ctccgtccaaaatatccgttaatagtgatgatatgtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtc 3456961  T
Q  381 tcttttttcct 391  Q
    |||||||||||    
T  3456962 tcttttttcct 3456972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 167 - 315
Target Start/End: Complemental strand, 13613706 - 13613558
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| || ||| | ||||||||||||| |||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13613607  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    |||||||| ||||||||||||||||| |||| ||| | |||||||||||    
T  13613606 catcaaattagtccctccgtccaaaaggtccattagtggtgatgatgtg 13613558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 32439215 - 32439065
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 32439116  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  || |||| ||||||||| |||||    
T  32439115 catcaaaatggtccctccgtccaaaagatctgttagtagtgatgacgtgtc 32439065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 3480746 - 3480627
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||   | | |||    
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtc 3480647  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  3480646 aatcaaattagtccctccgt 3480627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 32454248 - 32454367
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 32454347  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  32454348 aatcaaattagtccctccgt 32454367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 32518587 - 32518467
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| ||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||   | | ||    
T  32518587 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 32518488  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  32518487 caatcaaatcagtccctccgt 32518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 186 - 317
Target Start/End: Original strand, 20523385 - 20523516
Alignment:
Q  186 tccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccg 285  Q
    |||| ||||||| |||||||| |||| ||||||| |||||||| ||||||||| | |||||||||||||||| |||||||||||||||   |||||||||    
T  20523385 tcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccg 20523484  T
Q  286 tccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||  || |||| | |||||||||||||    
T  20523485 tccaaaagttctgttagtggtgatgatgtgtc 20523516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 316
Target Start/End: Original strand, 32516877 - 32517026
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| |||||||||||||||| | ||||| | | |||| || |||||||| || |||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtc 32516976  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgt 316  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| ||||    
T  32516977 catcaaaattgtccctccgtccaaaagctccgttagtggtgatgacgtgt 32517026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 185 - 317
Target Start/End: Original strand, 10568417 - 10568549
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    ||||||||||||| |||||||  |||| ||||||| |||||||  ||||||||  | |||||||||||||||| |||||||| ||||||  |||||||||    
T  10568417 gtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatcaaaatagtccctcc 10568516  T
Q  285 gtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||||  ||||||| | |||||||||||||    
T  10568517 gtccaaaagctccgttagtggtgatgatgtgtc 10568549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 7373060 - 7372933
Alignment:
Q  189 ttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcc 288  Q
    ||||||||| |||||| | |||| |||||||||||||||| ||||||||  | |||||||||||||||| ||| |||||||||||   ||||||||||||    
T  7373060 ttgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtcc 7372961  T
Q  289 aaaatgtccgttaatagtgatgatgtgt 316  Q
    ||||  ||| ||| | ||||||||||||    
T  7372960 aaaagctccattagtggtgatgatgtgt 7372933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 11355223 - 11355372
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 267  Q
    ||||||| |||||| | |||||||||||||||||||||| |||| |||||| |||||||||  |||||||| | | | |||||||||||| |||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  268 atcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    | ||||   ||||||||||||||||  |||| || | ||||||| |||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatgacgtgtc 11355372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 13613517 - 13613441
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||||||| ||||||||| |||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||    
T  13613517 gtcagccatgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacatttcagtctcttttttcct 13613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 18645193 - 18645074
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| ||||||||  ||||| |||| ||||||||| ||||||||||||||||||| |||||||   | | ||    
T  18645193 agactaatacctcaaattcgtccttgaattttgaaaaatcggacaatt-cgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgt 18645095  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  18645094 caatcaaatcagtccctccgt 18645074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 13610690 - 13610808
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| || ||| | ||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||| | |||||   | | |||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtccat-aatttacaaaatgtc 13610788  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  13610789 aatcaaatcagtccctccgt 13610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 6899485 - 6899635
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||  |||| |||||| || ||||||  |||||||| | ||||||||| |||||| ||||| ||    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatc 6899584  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   |||||| |||||||||  ||||||| |  ||||||||||||    
T  6899585 catcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgtgtc 6899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 11357284 - 11357164
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    |||||||||  ||||| | |||||||||||||||||||||| |||| ||||||||||||||||   ||||| ||| |||||||||||||||   | | ||    
T  11357284 agactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgt 11357185  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    |  ||||||||||||||||||    
T  11357184 cattcaaatcagtccctccgt 11357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 318
Target Start/End: Original strand, 9398713 - 9398811
Alignment:
Q  220 ctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtca 318  Q
    ||||||||| ||||||||| | ||||||||||||||||  |||||| |||||||   ||||||||||||||||  ||||||| | ||||||||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgtgtca 9398811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 287
Target Start/End: Complemental strand, 10570009 - 10569888
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | |||||||||||||||||||||   ||| ||||||| |||||||| | ||||||| | |||||||  ||||||   | | ||    
T  10570009 agactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgt 10569910  T
Q  266 ccatcaaatcagtccctccgtc 287  Q
    ||||||||||||||||||||||    
T  10569909 ccatcaaatcagtccctccgtc 10569888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | ||||||||||||| |||||||  |||| ||| ||| |||||||| ||||||||| |||||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 6902987 - 6902868
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| |||||||  |||| ||||||||| |||||| || |||||| | |||||||  ||||||   | | ||    
T  6902987 agactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcg-aatatctatttagtcctcgaatttacaaaatgt 6902889  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    |||||||||||||||||||||    
T  6902888 ccatcaaatcagtccctccgt 6902868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 317
Target Start/End: Original strand, 7049828 - 7049907
Alignment:
Q  238 caaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||| ||||||||||||| |||||||||||||||   ||||||||||||||||  ||||||  | |||||||||||||    
T  7049828 caaattcgtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgtgtc 7049907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 3018510 - 3018433
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||| |||||    
T  3018510 ttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccatccaa 3018433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 17952120 - 17952032
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||||||||    
T  17952120 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 17952032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaat 235  Q
    |||||||| |||||| | ||| ||||||||| ||||||||  |||||||||||||||||||| ||||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 9398851 - 9398913
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| ||||||||||| | |||| |||| ||||||| |||||||    
T  9398851 cagccacgtgtacaaggactaaattgatggaaattataaaaattcgagatttaacttttcagt 9398913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 314
Target Start/End: Complemental strand, 14338581 - 14338452
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    ||||||||||||| |||||||   ||| |||||||   |||||| |||||| || ||||  |||||||||||  |||||||||||||||   ||||||||    
T  14338581 gtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccctcc 14338482  T
Q  285 gtccaaaatgtccgttaatagtgatgatgt 314  Q
    || |||||  ||||||| |  |||||||||    
T  14338481 gttcaaaagctccgttactgatgatgatgt 14338452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 2968185 - 2968245
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 273  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||    
T  2968185 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaa 2968245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 20525423 - 20525304
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| ||||||||| |||||| | |||| ||| |||||||||||| | ||||| | | || |||| |||||||   | | |||    
T  20525423 gactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtc 20525324  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  20525323 aatcaaatcagtccctccgt 20525304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 11355413 - 11355475
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||  |||||||||| || |||| |||| ||||||| |||||||    
T  11355413 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagt 11355475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 20523557 - 20523619
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| ||||| |||| || |||| |||| ||||||| |||||||    
T  20523557 cagccacgtgtacaaggactaaattgatgaaaatggtaaaaattcgagatttaacttttcagt 20523619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 35175924 - 35175862
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaa 292  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||||||||    
T  35175924 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaa 35175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 7051312 - 7051263
Alignment:
Q  189 ttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatc 238  Q
    |||||||||||||||||  |||| |||||| ||||||||| |||||||||    
T  7051312 ttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatc 7051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 7371175 - 7371244
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaata 236  Q
    |||||||| |||||  | ||||||||||||| ||||||||  ||| || ||||||||||||| |||||||    
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 30891199 - 30891248
Alignment:
Q  242 ttagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 291  Q
    |||||||||||||||  |||||||||| ||||  ||||||||||||||||    
T  30891199 ttagtccctgaatttgtcagacgtccaacaaagtagtccctccgtccaaa 30891248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 21068628 - 21068744
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | ||||||||||||| || ||||  |||| |||||||   |||||| ||||||||| | |||||||  ||||||   | | ||| ||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaat 21068727  T
Q  270 caaatcagtccctccgt 286  Q
    |||||||||||||||||    
T  21068728 caaatcagtccctccgt 21068744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 167 - 391
Target Start/End: Original strand, 37020508 - 37020732
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  37020508 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtc 37020607  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatat 366  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  37020608 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatat 37020707  T
Q  367 ttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||||||||||||    
T  37020708 ttaacatttcagtctcttttttcct 37020732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 167 - 391
Target Start/End: Complemental strand, 6786125 - 6785901
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||||| |||| || ||||||||||||||||||||||||||| ||||||||    
T  6786125 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtc 6786026  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatat 366  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| | |||||    
T  6786025 catcaaatcagtccctccgtccaaaatgtctgttaacagtgatgatgtgtcagccacgtatacaaggactaaactgatggaaatggtcaaaatttgatat 6785926  T
Q  367 ttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||| ||||||||    
T  6785925 ttaacatttcagtctcatttttcct 6785901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 167 - 391
Target Start/End: Complemental strand, 24208186 - 24207971
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| ||||||||| |||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatat 366  Q
    |||||||||||||||||||||||||         || | ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  24208086 catcaaatcagtccctccgtccaaa---------aacaatgatgatgtgtcagccacgtgtacaaggactaaactgatggaaatggtcaaaattcgatat 24207996  T
Q  367 ttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||| ||||||||    
T  24207995 ttaacatttcagtctcatttttcct 24207971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 3253946 - 3254082
Alignment:
Q  18 tttttgattgcatgaatgattatggttattgtttacggtaagagtacagaagtattaccctcttttgtttaactgttgatatagtggttagtgtgaatag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3253946 tttttgattgcatgaatgattatggttattgtttacggtaagagtacagaagtattaccctcttttgtttaactgttgatatagtggttagtgtgaatag 3254045  T
Q  118 ttttatagatgccaatcgtagtaaaccgatattgtaa 154  Q
    |||||||||||||||||||||||||||||||||||||    
T  3254046 ttttatagatgccaatcgtagtaaaccgatattgtaa 3254082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 37022274 - 37022155
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 37022175  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  37022174 aatcaaattagtccctccgt 37022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 39664892 - 39664742
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| |||||||| ||||||| ||||||||| | |||||||||||||||| ||||||||    
T  39664892 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtc 39664793  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  ||||||| | |||||||||||||    
T  39664792 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtc 39664742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 24205598 - 24205717
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  24205598 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 24205697  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  24205698 aatcaaattagtccctccgt 24205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 293
Target Start/End: Original strand, 16763076 - 16763202
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| |||| |||||||||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 16763175  T
Q  267 catcaaatcagtccctccgtccaaaat 293  Q
    |||||||   |||||||||||||||||    
T  16763176 catcaaaatggtccctccgtccaaaat 16763202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 6783364 - 6783453
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 2577569 - 2577450
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||   | | |||    
T  2577569 gactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaaaatgtc 2577470  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  2577469 aatcaaattagtccctccgt 2577450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 40560223 - 40560373
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    ||||||||  ||||| | ||| |||||||||||||||||   ||| |||||||||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  40560223 gactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 40560322  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||  |||||||||||||||||  || |||| | |||||||||||||    
T  40560323 catcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgtgtc 40560373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 2766934 - 2767084
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| ||||  |||||| |||||||| ||||||||| | |||||||||||||||| ||||||||    
T  2766934 gactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 2767033  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
     ||||||   ||||||| ||||||||  ||||||| | |||||||||||||    
T  2767034 tatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgtgtc 2767084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 14389228 - 14389078
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| ||||||||| ||||||||  ||| |||||||||||||||| ||||||||| | |||||||||||||||| || | |||    
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  | ||||| |||||||||||||||    
T  14389128 catcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgtgtc 14389078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 14387348 - 14387468
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | | ||    
T  14387348 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgt 14387447  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | ||||||| |||||||||||    
T  14387448 caatcaaataagtccctccgt 14387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 171 - 317
Target Start/End: Complemental strand, 42519346 - 42519199
Alignment:
Q  171 aatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaattttt-cgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    |||| |||||| | |||||||||||||||||||| |||||| || |||| ||||||||| | ||||||| | |||||||||||||||| |||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  270 caaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||   |||||||| |||||||  ||||||| | |||||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtc 42519199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 44709889 - 44709739
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||| ||  ||| |||| ||||||||||| ||||||| | | |||||||||||||||| ||||||||    
T  44709889 gactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtc 44709790  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  | ||||| | |||||||| ||||    
T  44709789 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatgatatgtc 44709739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 19908392 - 19908240
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaa-tcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacg 264  Q
    ||||||||| |||||| | ||||||||||||||||||| |||  ||| || ||||||||||||| ||||||||| | ||||||| |||||||| ||||||    
T  19908392 agactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacg 19908293  T
Q  265 tccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||| |||||   ||||||||||||||||  ||||||| | ||||||| |||||    
T  19908292 tccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 19908240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 16764700 - 16764581
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| | ||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 16764601  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||| ||||||||||||    
T  16764600 aatcaaaccagtccctccgt 16764581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 318
Target Start/End: Original strand, 17696209 - 17696357
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | ||||||||||||| ||||||||  ||| ||| ||||||||||||   ||||||| | |||||||||||||||| || ||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  270 caaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtca 318  Q
    ||||   ||| ||||||||||||  ||||||| | ||||||||||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttagtggtgatgatgtgtca 17696357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 315
Target Start/End: Original strand, 39455169 - 39455317
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    ||||||||||||||| | |||||||||||||||||||||| | || |||   |||||||||| | ||||||| | ||||||| |||||||| ||||||||    
T  39455169 gactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtc 39455268  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    |||||||   ||| |||||| |||||  ||||||| | | |||||||||    
T  39455269 catcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgtg 39455317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 16376736 - 16376855
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| |||||||||||||||||| |||| |||||||||||||||| ||||||| | | |||||||||||||||   | |  ||    
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatc 16376835  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  16376836 aatcaaatcagtccctccgt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 19906700 - 19906801
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    |||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | ||||||||  |||||   | | ||| |||||||||||||||||    
T  19906700 gtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaatcaaatcagtccctcc 19906799  T
Q  285 gt 286  Q
    ||    
T  19906800 gt 19906801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 39663154 - 39663273
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| || ||| | ||||||||||||| |||||||| |||| |||||||||||||||| | ||||| | | |||||||||||||||   | | |||    
T  39663154 gactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 39663253  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  39663254 aatcaaatcagtccctccgt 39663273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 40561967 - 40561848
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| ||||||||| ||||||||  |||||||||| |||||||||  |||||| |||||||||||||||||||   | | |||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtc 40561868  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||| ||||||||||    
T  40561867 aatcaaatcggtccctccgt 40561848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 16377305 - 16377192
Alignment:
Q  203 atcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaa 302  Q
    |||| |||| || ||||||||||||| | ||||||| | ||||||| |||||||| || ||||||||||||   ||||||||||||||||  |||||||     
T  16377305 atcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttag 16377206  T
Q  303 tagtgatgatgtgt 316  Q
    | ||||||| ||||    
T  16377205 tggtgatgacgtgt 16377192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 11023091 - 11023003
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| || |||||||||||||||| ||||||||    
T  11023091 ttcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgtta 11023003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 6797529 - 6797632
Alignment:
Q  189 ttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcc 288  Q
    |||||||||||||||| |   || ||||| |||||||||| ||||||||| | ||||||||| |||||| |||||||| ||||||   || |||||||||    
T  6797529 ttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaaatggttcctccgtcc 6797628  T
Q  289 aaaa 292  Q
    ||||    
T  6797629 aaaa 6797632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 19581413 - 19581526
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | |||||| |||||| |||||||   ||| || ||||||||||||| ||||||||| | |||||||  ||||||  || | ||    
T  19581413 agactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgt 19581512  T
Q  266 ccatcaaatcagtc 279  Q
    ||||||||||||||    
T  19581513 ccatcaaatcagtc 19581526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 361509 - 361595
Alignment:
Q  231 gaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||||||||||||  ||||||   |||||||||||||| | |||||||| |||||| || || |||||| ||||||| |||||    
T  361509 gaaatatcaaattagtcattgaattcgtcagacgtccatcaatttagtccctctgtccaatatatctgttaatggtgatgaggtgtc 361595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 29909735 - 29909661
Alignment:
Q  216 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   ||||||||||||||    
T  29909735 gtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtccaa 29909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 11315396 - 11315335
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 291  Q
    |||||||||||| |||| |||||||||  |||||||||||||||   |||||||||||||||    
T  11315396 cgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatggtccctccgtccaaa 11315335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 37417323 - 37417396
Alignment:
Q  217 tccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||| |||||||    
T  37417323 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaa 37417396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 318
Target Start/End: Original strand, 37645505 - 37645638
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    ||||||||||||| |||||||  || | ||||||| | ||||||  |||||||| | ||||||| ||||||||||||| ||  ||||||   ||||||||    
T  37645505 gtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttatcaaaattgtccctcc 37645604  T
Q  285 gtccaaaatgtccgttaatagtgatgatgtgtca 318  Q
    ||||| ||  || |||| |  |||||||||||||    
T  37645605 gtccataagctctgttattgatgatgatgtgtca 37645638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 26584895 - 26584819
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcca 289  Q
    ||||||||| || ||||| ||||||||||||| ||||| |||||   |||||||||||||||   ||||||||||||    
T  26584895 ttcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtcca 26584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 39456850 - 39456750
Alignment:
Q  186 tccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccg 285  Q
    ||||||||||||||||||| | | || ||||||| |||||||| | ||||| | | |||||||||||||||   | | ||| ||||||||||||| ||||    
T  39456850 tccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatttataaaatgtcaatcaaatcagtccatccg 39456751  T
Q  286 t 286  Q
    |    
T  39456750 t 39456750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 6797698 - 6797760
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| ||||| |||| || |||| |||| ||||||| |||||||    
T  6797698 cagccacgtgtacaaggactaaattgatgaaaatggtaaaaattcgagatttaacttttcagt 6797760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 6799494 - 6799436
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttt 228  Q
    |||||||||||| | ||||||||||||| ||||||||  ||| ||||||| ||||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaatttt 6799436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 14389037 - 14388975
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||  |||||||||| || |||| |||| ||||||| |||||||    
T  14389037 cagccacgtgtacaaggactaacttgatggaaatggtaaaaattcgagatttaacttttcagt 14388975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 40560414 - 40560476
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| || | ||||||| |||||||    
T  40560414 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcaagatttaacttttcagt 40560476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 15432369 - 15432434
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 273  Q
    |||| ||| ||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||    
T  15432369 tcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaa 15432434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 34400314 - 34400383
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaata 236  Q
    |||||||| |||||| |  |||||||||||| ||||||||  ||| ||| |||||||||||| |||||||    
T  34400314 gactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaata 34400383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 39458 - 39398
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||||| |||||||||||||||  ||||||| |||||||   ||||| ||||||||    
T  39458 cgaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaa 39398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 28246709 - 28246797
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||  |||||  |||||||||||| |||| |||||||||    |||||||||||| |  ||||||| |||||||| ||||||||    
T  28246709 ttcgtccccaaatttaacgaaatatcaaaatagttcctgaatttgtttgacgtccatcaatttcgtccctctgtccaaaaggtccgtta 28246797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 166 - 391
Target Start/End: Complemental strand, 9121793 - 9121568
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9121793 agactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgt 9121694  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgata 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||| ||||||    
T  9121693 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagcaacatgtacaaggactaaactgatggaaattgtcaaaattcgata 9121594  T
Q  366 tttaacatttcagtctcttttttcct 391  Q
    ||||||||||||||||||||||||||    
T  9121593 tttaacatttcagtctcttttttcct 9121568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 166 - 391
Target Start/End: Complemental strand, 47013207 - 47012982
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47013207 agactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgt 47013108  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgata 365  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||||    
T  47013107 ccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtgtcagccacgtgtacagggactaaactgatggaaattgtcaaaatttgata 47013008  T
Q  366 tttaacatttcagtctcttttttcct 391  Q
    ||||||||||||||||||||||||||    
T  47013007 tttaacatttcagtctcttttttcct 47012982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 245 - 387
Target Start/End: Original strand, 1442599 - 1442741
Alignment:
Q  245 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgat 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  1442599 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtgtcagccacgtgtacaaggactaaactgat 1442698  T
Q  345 ggaaattgtcaaaaatcgatatttaacatttcagtctcttttt 387  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  1442699 ggaaattgtcaaaattcgatatttaacatttcagtctcttttt 1442741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 167 - 315
Target Start/End: Complemental strand, 46583680 - 46583532
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 46583581  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||||  |||||||||||||||| |||||||||| |||||||||||    
T  46583580 catcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgtg 46583532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 170 - 315
Target Start/End: Complemental strand, 33602765 - 33602620
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | ||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  270 caaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||| ||||||||||||||||| |||||||| || ||||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgtg 33602620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 4856090 - 4855940
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4855991  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  ||||||||| ||||||| |||||    
T  4855990 catcaaaatggtccctccgtccaaaagctccgttaatggtgatgacgtgtc 4855940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 9120039 - 9120158
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 9120138  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  9120139 aatcaaattagtccctccgt 9120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 34778263 - 34778112
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||||||||||||  ||| | |||||||||||||| |||||||||||||||||||||||||||| |||| ||    
T  34778263 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgt 34778164  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||||   ||||||||||||||||  ||||||| | ||||||| |||||    
T  34778163 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 34778112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 165 - 318
Target Start/End: Original strand, 2869577 - 2869730
Alignment:
Q  165 gagactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacg 264  Q
    |||||||||| |||||| | ||||||||||||| |||||||| |||| |||||||||||||||| ||||||||| | |||||| || |||||| ||||||    
T  2869577 gagactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacg 2869676  T
Q  265 tccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtca 318  Q
    |||||||||   ||||||||||||||||  || |||| | ||||||||||||||    
T  2869677 tccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtca 2869730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 185 - 379
Target Start/End: Complemental strand, 51896258 - 51896056
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    |||||| ||||||||||||||  |||| || ||||||||||||| ||||||||| | |||||||||||||||| |||| ||||||||||  |||||||||    
T  51896258 gtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctcc 51896159  T
Q  285 gtccaaaatgtccgttaatagtgatgatgtgtc--------agccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttc 376  Q
    ||||||||  || |||| | |||||||||||||         |||||||||||||| |||||| |||||||||| || |||| |||| ||||||| ||||    
T  51896158 gtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttc 51896059  T
Q  377 agt 379  Q
    |||    
T  51896058 agt 51896056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 47011456 - 47011575
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtc 47011555  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||| |||||||||||||    
T  47011556 aatcaactcagtccctccgt 47011575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 25278492 - 25278342
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| |||||||||||||||| ||||||| | | ||||||| |||||||| || |||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtc 25278393  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| |||||    
T  25278392 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 25278342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 46582004 - 46582129
Alignment:
Q  161 tttggagactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgca 260  Q
    |||| ||||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   |    
T  46582004 tttgaagactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaa 46582103  T
Q  261 gacgtccatcaaatcagtccctccgt 286  Q
     | ||| |||||||||||||||||||    
T  46582104 aatgtcaatcaaatcagtccctccgt 46582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 37346051 - 37345932
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||   | | |||    
T  37346051 gactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 37345952  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  37345951 aatcaaatcagtccctccgt 37345932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 27087283 - 27087433
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||| ||||||||||||||| |||| || ||||||||||||| ||||||||| | |||||||||||||||| || |||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 27087382  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   | || |||||||||||  ||||||| | |||||||||||||    
T  27087383 catcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgtgtc 27087433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 31238619 - 31238469
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| || ||||||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 31238520  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   |||| || ||||||||  ||||||| | ||||||| |||||    
T  31238519 catcaaaatggtccatctgtccaaaagctccgttagtggtgatgacgtgtc 31238469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 37344342 - 37344492
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| |||||||||||||||| ||||||| | | ||||||  |||||||| || |||||    
T  37344342 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtc 37344441  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| |||||    
T  37344442 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 37344492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 26223587 - 26223676
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 1444271 - 1444151
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| ||||||||||||||| |||||| ||||||||  |||||| ||||||||||||||| |||||||||||||||||||||||||   | | ||    
T  1444271 agactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgt 1444172  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | ||||||| |||||||||||    
T  1444171 caatcaaattagtccctccgt 1444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 310
Target Start/End: Complemental strand, 50556222 - 50556078
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    |||||||||||||||| | ||| |||||||||||||||||  |||| |||||| ||||||||| ||||||||| | ||||||||| |||||| |||||||    
T  50556222 agactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgt 50556123  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatg 310  Q
    | ||||||   ||||||||||||||||  ||||||| | ||||||    
T  50556122 ctatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 6818802 - 6818658
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  |||  ||||||||| ||||  | ||||||| | |||||||||||||||| ||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtc 6818703  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatga 311  Q
    |||||||   ||||||||||||||||  ||||||| | |||||||    
T  6818702 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 8167941 - 8168061
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| ||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||| |   | | ||    
T  8167941 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgt 8168040  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  8168041 caatcaaatcagtccctccgt 8168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 8169657 - 8169538
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtc 8169558  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||||| |||||||||    
T  8169557 aatcaaatcaatccctccgt 8169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 25276742 - 25276861
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  ||||||| ||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 25276841  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  25276842 aatcaaatcagtccctccgt 25276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 314
Target Start/End: Complemental strand, 3013600 - 3013447
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||| |||  |||| ||||||| |||||||| ||||||||| | |||||||||||||||| ||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtc 3013501  T
Q  267 ------catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 314  Q
          |||||||  |||||||||||||||||  ||||||| | ||||||||||    
T  3013500 catggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 4854410 - 4854499
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    ||||||||  ||||| | ||||||||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  4854410 gactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 33602579 - 33602503
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||||||| ||||||||| |||||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||    
T  33602579 gtcagccatgtgtacaaggactaaattgatggaaatagtcaaaattcgagatttaacatttcagtctcttttttcct 33602503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 31236819 - 31236938
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| || ||||||||||||| ||||||||| | ||||| |||||||||   | |  ||    
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaatttacaaaatatc 31236918  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  31236919 aatcaaatcagtccctccgt 31236938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 46583491 - 46583417
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttc 389  Q
    |||||||||||||||||| |||||| ||||| |||| ||||||| |||||||||||||||||||||||| |||||    
T  46583491 gtcagccacgtgtacaaggactaaattgatgaaaatggtcaaaattcgatatttaacatttcagtctctcttttc 46583417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 15104487 - 15104591
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgat 312  Q
    ||||| |||||||||| ||||||||| | |||||||||||||||| |||||||||||||||   |||| |||||||||||  ||| ||| | ||||||||    
T  15104487 ttcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgat 15104586  T
Q  313 gtgtc 317  Q
    |||||    
T  15104587 gtgtc 15104591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 27089368 - 27089249
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||   |||||||||| ||||||||  |||||||||||||| |||||||||||   | | |||    
T  27089368 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtc 27089269  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||||||||| |||||    
T  27089268 aatcaaatcagtccttccgt 27089249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 33599236 - 33599335
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    ||||||||||||| |||||||| |||| ||||||| |||||||| ||||||||||||||| || ||||||||   | | ||| |||||||||||||||||    
T  33599236 gtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcagtccctcc 33599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 25279077 - 25278975
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||   ||| ||||| ||| |||||| ||||||||| | |||||||||||||||| ||||||||    
T  25279077 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtc 25278978  T
Q  267 cat 269  Q
    |||    
T  25278977 cat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 50554164 - 50554278
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 267  Q
    ||||||| |||||| | |||||||||||||||||||||| |||| ||||||||||||||||   ||||| | | ||||| |||||||||   | | |||     
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtca 50554263  T
Q  268 atcaaatcagtccct 282  Q
    |||||||||||||||    
T  50554264 atcaaatcagtccct 50554278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 1442551 - 1442611
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttt 228  Q
    ||||||| |||| ||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttt 1442611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 2871166 - 2871046
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    |||||||||||||||| | ||||||||||||| ||||||||   || |||||||||||||||| ||||||| | | || |||  |||||||   | | ||    
T  2871166 agactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgt 2871067  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  2871066 caatcaaatcagtccctccgt 2871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 3011858 - 3011974
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | |||||| ||||||||||||||  |||| ||||| |||||||||| ||||||||| | |||||| ||||||||   | | ||| ||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaat 3011957  T
Q  270 caaatcagtccctccgt 286  Q
    ||||||||||| |||||    
T  3011958 caaatcagtccatccgt 3011974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 6816866 - 6816926
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttt 228  Q
    ||||||| |||||| | |||||||||||||||||||||| |||| ||||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaatttt 6816926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 286
Target Start/End: Original strand, 51894588 - 51894686
Alignment:
Q  188 cttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 286  Q
    ||||||||||||||||| | |||| || ||| ||||||||| ||||||||  | |||||||||||||||   | | ||| |||||||||||||||||||    
T  51894588 cttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 51894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 42134532 - 42134605
Alignment:
Q  217 tccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   ||||||||||||||    
T  42134532 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 42134605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 52641882 - 52642007
Alignment:
Q  161 tttggagactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgca 260  Q
    |||| ||||||||| |||||| | ||||||||||||| |||||||   ||| |||||||||||||||| ||||||||  | |||||||   |||||   |    
T  52641882 tttgaagactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcctcaaatttacaa 52641981  T
Q  261 gacgtccatcaaatcagtccctccgt 286  Q
     | || ||||||||||||||||||||    
T  52641982 aatgttcatcaaatcagtccctccgt 52642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 5783427 - 5783498
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||||||||    
T  5783427 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 5783498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 37088225 - 37088106
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| |  |||||||||||||||||||||  ||| ||||| |||||||||| ||||||| | | || |||| | |||||   | | |||    
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtc 37088126  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  37088125 aatcaaatcagtccctccgt 37088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 52643736 - 52643649
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 257  Q
    ||||| |||||| | |||||| |||||| |||||||  | || |||||||||||||||| ||||||||  | ||||||||||||||||    
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaatttt 52643649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 36895593 - 36895511
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||| ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||| |||||||    
T  36895593 tcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaa 36895511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 18184017 - 18183961
Alignment:
Q  217 tccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 273  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  18184017 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 18183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 25278854 - 25278934
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtc 247  Q
    |||||||| |||||| |  |||||||||||| |||||||  |||| || ||||||||||||| ||||||||| | ||||||    
T  25278854 gactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 45044949 - 45045009
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaattt 227  Q
    |||||||| |||||| | |||||||||||||||||||| | || | |||||||||||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 388
Target Start/End: Original strand, 15104632 - 15104703
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctctttttt 388  Q
    |||||||||||||||| |||||  |||||||||| || |||| |||| ||||||| ||||||| || |||||    
T  15104632 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtcattttt 15104703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 3013403 - 3013341
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| | || ||||||| |||||||    
T  3013403 cagccacgtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcagt 3013341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 27940649 - 27940727
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 286  Q
    |||| ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||   ||||||||||    
T  27940649 tcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 31238428 - 31238366
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||  |||||||||| || |||| |||| ||||||| |||||||    
T  31238428 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagt 31238366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 31801674 - 31801756
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||| ||||||||| |||| | ||||||||||| ||||||| | |||||   ||||||||||||||   ||||||||||||||    
T  31801674 tcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaaggtccctccgtccaa 31801756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 33599186 - 33599248
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttt 228  Q
    ||||||||| |||||| | ||||||||||||| ||||||||  ||| ||||||| ||||||||    
T  33599186 agactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaatttt 33599248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 34778072 - 34778010
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| | ||||| |||||||    
T  34778072 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagt 34778010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 46638881 - 46638808
Alignment:
Q  217 tccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||| |||| | ||||||||||| ||||||| |||||||  |||||||||| ||||   ||||||||||||||    
T  46638881 tccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacgtccaccaaaaaggtccctccgtccaa 46638808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 377
Target Start/End: Complemental strand, 25278301 - 25278241
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttca 377  Q
    |||||||||||| ||| |||||| |||||||||| || |||| |||| ||||||| |||||    
T  25278301 cagccacgtgtataaggactaaattgatggaaatggtaaaaattcgagatttaacttttca 25278241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 37344533 - 37344593
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttca 377  Q
    |||||||||||| ||| |||||| |||||||||| || |||| |||| ||||||| |||||    
T  37344533 cagccacgtgtataaggactaaattgatggaaatggtaaaaattcgagatttaacttttca 37344593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 3e-76; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 167 - 391
Target Start/End: Complemental strand, 27407041 - 27406817
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| |||||| |  ||||||||||| |||||| |||||||||| ||| ||||||||||||||| ||||||||    
T  27407041 gactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtc 27406942  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatat 366  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |  | |     
T  27406941 catcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaatggtcaaaatttaaaaa 27406842  T
Q  367 ttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||| ||||||||    
T  27406841 ttaacatttcagtctcatttttcct 27406817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 177 - 389
Target Start/End: Original strand, 15305807 - 15306019
Alignment:
Q  177 tcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatca 276  Q
    ||||||||||||||||||||| |||||| | ||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  15305807 tcaaaatagtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 15305906  T
Q  277 gtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttc 376  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| || | | |||||||||     
T  15305907 gtccctccgtccaaaatatccgttaacagtgatgatgtgtcagccacgtatacaaggactaaactgatggaaatggtcaaaattcaaaacttaacatttt 15306006  T
Q  377 agtctcttttttc 389  Q
    |||||| ||||||    
T  15306007 agtctcatttttc 15306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 177 - 389
Target Start/End: Original strand, 15486176 - 15486388
Alignment:
Q  177 tcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatca 276  Q
    ||||||||||||||||||||| |||||| | ||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  15486176 tcaaaatagtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 15486275  T
Q  277 gtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttc 376  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| || | | |||||||||     
T  15486276 gtccctccgtccaaaatatccgttaacagtgatgatgtgtcagccacgtatacaaggactaaactgatggaaatggtcaaaattcaaaacttaacatttt 15486375  T
Q  377 agtctcttttttc 389  Q
    |||||| ||||||    
T  15486376 agtctcatttttc 15486388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 167 - 315
Target Start/End: Original strand, 27691154 - 27691302
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  27691154 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 27691253  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  27691254 catcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgtg 27691302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 167 - 315
Target Start/End: Complemental strand, 33708947 - 33708800
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| |  |||||||||||||||||| || ||||||||||||||||||||| |||||||| ||||||||||||||||||| || |||||    
T  33708947 gactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtc 33708849  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  33708848 catcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgtg 33708800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 13282477 - 13282628
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||||||||||||  ||| |||||||||||||||| ||||||||| | |||||||||||||||| || ||||    
T  13282477 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 13282576  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||||   ||||||||||||||||  ||||||| | |||||||||||||    
T  13282577 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtc 13282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 8609931 - 8609781
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | || |||||||||||||||||||  ||| |||||||||||||||| ||||||||| | |||||||||||||||| ||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 8609832  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| |||||    
T  8609831 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 8609781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 13108480 - 13108330
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||   || | |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  | ||||| | ||||||| |||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatgacgtgtc 13108330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 35509214 - 35509333
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35509313  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||||||||| |||||    
T  35509314 aatcaaatcagtccatccgt 35509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 38547228 - 38547378
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||  | ||||||||||||||||||||||  ||| | ||||| |||||||| |||||||||||||||||||||||||||| ||||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 38547327  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   |||||||| |||||||  ||||||| | ||||||| |||||    
T  38547328 catcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtc 38547378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 15308350 - 15308261
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 15488719 - 15488630
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 29237151 - 29237240
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 601794 - 601674
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||   | | ||    
T  601794 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgt 601695  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | ||||||| |||||||||||    
T  601694 caatcaaattagtccctccgt 601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 42941777 - 42941924
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | |||||||||||||||||||||   ||| ||||||||||||||||  |||||||  | |||||||||||||||| |||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  270 caaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||  |||||||||||||||||| ||||||| | | |||||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgtgtc 42941924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 286
Target Start/End: Original strand, 33707207 - 33707325
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 267  Q
    ||||||| |||||| | ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||   | | |||     
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtca 33707306  T
Q  268 atcaaatcagtccctccgt 286  Q
    |||||||||||| ||||||    
T  33707307 atcaaatcagtcactccgt 33707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 33762802 - 33762683
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  33762802 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtc 33762703  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||||| |||||||||    
T  33762702 aatcaaatcaatccctccgt 33762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 35510908 - 35510789
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| |||||||||||| ||||||||  ||||||||||||||||||||||||||   | | |||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 35510809  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  35510808 aatcaaatcagtccctccgt 35510789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 41825785 - 41825638
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | ||||||||||||| ||||||| |  || ||||||| |||||||| ||||||||| | |||||||||||||||| |||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  270 caaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||   ||| ||||||||||||  || |||| |||||||||||||||    
T  41825685 caaaatggtcactccgtccaaaagctctgttagtagtgatgatgtgtc 41825638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 13486243 - 13486093
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | || |||||||||| |||||||| |||  |||||| ||| ||||| ||||||||| | |||||||||||||||| ||||||||    
T  13486243 gactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtc 13486144  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||| ||||||||  ||| ||| |||||||||||||||    
T  13486143 catcaaaatggtccctctgtccaaaagctccattagtagtgatgatgtgtc 13486093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 29239277 - 29239187
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    ||||||||| |||||| | ||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29239277 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 8608237 - 8608357
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctg-aatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    |||||||| || ||| | ||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||   | | ||    
T  8608237 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaatttataaaatgt 8608336  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  8608337 caatcaaatcagtccctccgt 8608357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 316
Target Start/End: Original strand, 22272334 - 22272485
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaa--tcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacg 264  Q
    |||||||| |||||| | ||| |||||||||||||||  ||  |||| |||||||||||||||| || |||||| | |||||||||||||||| || |||    
T  22272334 gactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacg 22272433  T
Q  265 tccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgt 316  Q
    |||||||||  ||||||||| |||||||  ||||||| | ||||||||||||    
T  22272434 tccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgtgt 22272485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 315 - 391
Target Start/End: Complemental strand, 33708759 - 33708683
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33708759 gtcaaccacgtgtacaaggactaaattgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcct 33708683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 185 - 317
Target Start/End: Complemental strand, 41042710 - 41042578
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    |||||||||||||||||||| |  ||| || |||||||||||||  |||||||| | |||||||||||||||| ||| |||||||||||   ||||||||    
T  41042710 gtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtccatcaaaatggtccctcc 41042611  T
Q  285 gtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||||  ||||||| | |||||||||||||    
T  41042610 gtccaaaagctccgttagtggtgatgatgtgtc 41042578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 27692926 - 27692807
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtc 27692827  T
Q  267 catcaaatcagtccctccgt 286  Q
     || ||||||||||||||||    
T  27692826 aattaaatcagtccctccgt 27692807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 33761069 - 33761188
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| ||||||||| |||||||   |||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33761168  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  33761169 aatcaaatcagtccctccgt 33761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 38548920 - 38548801
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||| |||||||||||   | |  ||    
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttc 38548821  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  38548820 aatcaaatcagtccctccgt 38548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 42943515 - 42943396
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| |||||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 42943416  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  42943415 aatcaaatcagtccctccgt 42943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    ||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||| |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 27691343 - 27691419
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  27691343 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcagtatcttttttcct 27691419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 166 - 317
Target Start/End: Complemental strand, 7745257 - 7745106
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    |||||||||||||||| | ||| ||||||||| |||||||   ||| |||||| ||||||||| ||||||||  | |||||||||| ||||| ||||| |    
T  7745257 agactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacat 7745158  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||||   |||||||| |||||||  ||||||| | |||||||||||||    
T  7745157 ccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtc 7745106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 13106804 - 13106893
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| || ||| | ||||||||||||| ||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 13284066 - 13283965
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    ||||||||||||| ||||||||  |||||| ||||||||||||| ||||||||||||||||||| |||||||   | | ||| |||||||||||||||||    
T  13284066 gtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctcc 13283967  T
Q  285 gt 286  Q
    ||    
T  13283966 gt 13283965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 188 - 317
Target Start/End: Complemental strand, 26242437 - 26242308
Alignment:
Q  188 cttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtc 287  Q
    |||||||||| |||||||   ||| ||||||||| |||||| ||||||||| | |||||| ||||||||| |||||||||||||||   |||||||||||    
T  26242437 cttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtc 26242338  T
Q  288 caaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||  ||||||| | | |||||||||||    
T  26242337 caaaagctccgttagtggcgatgatgtgtc 26242308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 5036446 - 5036569
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 267  Q
    ||||||| |||||| | |||||| ||||||||||||||  |||| ||||||||||||||||  |||||||| | ||||||| |||||||| ||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  268 atcaaatcagtccctccgtccaaa 291  Q
    ||||||   ||| |||||||||||    
T  5036546 atcaaaatggtctctccgtccaaa 5036569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 22273981 - 22273861
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||||||||||||  ||| || ||| ||||||||| | ||||||| | |||||||||||||||   | | ||    
T  22273981 agactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaatgt 22273882  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  22273881 caatcaaatcagtccctccgt 22273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 26238726 - 26238845
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||   ||| |||||||||||||||| ||||||||| | |||||||  ||||||   | | |||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 26238825  T
Q  267 catcaaatcagtccctccgt 286  Q
    ||||||||||||||||||||    
T  26238826 catcaaatcagtccctccgt 26238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 9673263 - 9673159
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgat 312  Q
    ||||||||||||||||  |||||||| | ||| |||||||||||| |||||||||||||||   ||||||||||| ||||  | ||||| | ||||||||    
T  9673263 ttcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgatgat 9673164  T
Q  313 gtgtc 317  Q
    |||||    
T  9673163 gtgtc 9673159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 5038150 - 5038032
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| |||||||||||||||||| |||| ||||| | |||||||| ||||||| | | |||||||||||||||   | | |||    
T  5038150 gactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttacaaaatgtc 5038052  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  5038051 aatcaaatcagtccctccgt 5038032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 34681155 - 34681074
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtcc 248  Q
    |||||||| |||||| | ||||||||||||| ||||||||  ||| |||||||||||||||| ||||||||| | |||||||    
T  34681155 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 31821459 - 31821541
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||| ||||||||| |||| | ||||||||||| |||||||| ||||||  |||||||||||||||   ||||||||||||||    
T  31821459 tcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaaggtccctccgtccaa 31821541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 37526084 - 37526024
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||   ||||||||||||||    
T  37526084 cgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtccaa 37526024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 40020713 - 40020625
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||||||||    
T  40020713 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 40020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 41823889 - 41824009
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| || ||| | ||||||||||||| |||||||    |||||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||    
T  41823889 agactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgt 41823988  T
Q  266 ccatcaaatcagtccctccgt 286  Q
     ||||||||||||||||||||    
T  41823989 tcatcaaatcagtccctccgt 41824009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 5036640 - 5036702
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| ||||||| |||||||    
T  5036640 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagt 5036702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 9184446 - 9184507
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 291  Q
    |||||||||||||||||||||||||||  |||||||| ||| ||   |||||||||||||||    
T  9184446 cgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtccaaa 9184507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 11788367 - 11788444
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||  ||||| ||||||||||||||| ||||  ||||||  ||||||||||||||||   |||||||||||||    
T  11788367 ttcgtcccctaatttatcgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtccaa 11788444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 33750462 - 33750385
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||  ||||| | |||||||   ||||||||||||||    
T  33750462 ttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaa 33750385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 42897852 - 42897775
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||| |||| |  |||||||||| ||||||| |||||||  |||||||||||||||   ||||||||||||||    
T  42897852 ttcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 42897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 42941965 - 42942042
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcctatg 394  Q
    ||||||| |||||||| |||||| |||||||||| || |||| |||| ||||||| ||||||| |  |||||||||||    
T  42941965 cagccacatgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctatg 42942042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 28433794 - 28433706
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||| | |  |||||||||||||||| || |||||    
T  28433794 ttcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttcgtccctccgtccaaaaggttcgtta 28433706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 9671995 - 9672066
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    ||||||||||||| |  |||| ||||| ||||||| |||||||| ||||||||| | |||||||| ||||||    
T  9671995 gtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 388
Target Start/End: Complemental strand, 9673118 - 9673047
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctctttttt 388  Q
    |||||||||||||||| |||||  |||||||||| || |||| |||| ||||||| ||||||| || |||||    
T  9673118 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtcattttt 9673047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 40339760 - 40339677
Alignment:
Q  231 gaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 314  Q
    |||||||| | ||||||| |||||||| |||| ||||||||||   |||||| | |||||||  ||||||| ||||||||||||    
T  40339760 gaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 13108290 - 13108228
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| | ||||| |||||||    
T  13108290 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagt 13108228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 38547418 - 38547480
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| ||||||||||  | |||| |||||| ||||| |||||||    
T  38547418 cagccacgtgtacaaggactaaattgatggaaatgataaaaattcgatacttaacttttcagt 38547480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 40339633 - 40339571
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| ||||||  ||||||||| || |||| |||| ||||||| |||||||    
T  40339633 cagccacgtgtacaaggactaaatggatggaaatggtaaaaattcgagatttaacttttcagt 40339571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 41042537 - 41042475
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||| ||||||| |||||| ||||||||||||| |||| || | ||||||| |||||||    
T  41042537 cagccacgggtacaaggactaaattgatggaaattgtaaaaattcaagatttaacttttcagt 41042475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 13484544 - 13484613
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaat 235  Q
    ||||||||  |||||| | ||| ||||||||| ||||||||  ||| |||||||||||||||| ||||||    
T  13484544 agactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaat 13484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 31201221 - 31201148
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 286  Q
    ||||||| | |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  31201221 ttcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 377
Target Start/End: Complemental strand, 8609741 - 8609681
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttca 377  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| | ||||| |||||    
T  8609741 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttca 8609681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 9186673 - 9186617
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 286  Q
    ||||||||||||||||||||| ||||| ||| | ||| ||||| | |||||||||||    
T  9186673 cgaaatatcaaattagtccctaaatttggcatatgtcaatcaatttagtccctccgt 9186617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 377
Target Start/End: Complemental strand, 13486048 - 13485992
Alignment:
Q  321 cacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttca 377  Q
    |||||||||||| |||||| |||||||||| || |||| |||| ||||||| |||||    
T  13486048 cacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttca 13485992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 101; Significance: 6e-50; HSPs: 5)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 167 - 315
Target Start/End: Original strand, 3294 - 3442
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  3294 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3393  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  3394 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtg 3442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 167 - 315
Target Start/End: Original strand, 4466 - 4614
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  4466 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4565  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  4566 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtg 4614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 14432 - 14313
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 14333  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  14332 aatcaaatcagtccctccgt 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 3483 - 3559
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||||  |||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  3483 gtcagccacgtgtacaaagactaaattgatggaaatggtcaaaattcgatatttaacatttcagtctcttttttcct 3559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 4655 - 4731
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||||  |||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  4655 gtcagccacgtgtacaaagactaaattgatggaaatggtcaaaattcgatatttaacatttcagtctcttttttcct 4731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 6e-50; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 167 - 315
Target Start/End: Original strand, 43519424 - 43519572
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  43519424 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 43519523  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||    
T  43519524 catcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgtg 43519572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 835131 - 835012
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||||   | |||||    
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  835031 aatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 51011925 - 51012076
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    |||||||||||||||| | |||||||||||||||||||||| |||| ||| | | |||||||| ||||||||| | |||||| ||||||||| |||||||    
T  51011925 agactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgt 51012024  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||||   ||||||||||||||||  || |||| ||||||||| |||||    
T  51012025 ccatcaaaatggtccctccgtccaaaagctctgttagtagtgatgacgtgtc 51012076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 833223 - 833342
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 833322  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  833323 aatcaaattagtccctccgt 833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 4173829 - 4173710
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | |||||    
T  4173829 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgtc 4173730  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||| |||||||||||||    
T  4173729 aatcaactcagtccctccgt 4173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 5439736 - 5439617
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5439637  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  5439636 aatcaaattagtccctccgt 5439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 43507167 - 43507286
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43507266  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  43507267 aatcaaatcagtccctccgt 43507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 43508742 - 43508623
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43508643  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  43508642 aatcaaatcagtccctccgt 43508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 4169685 - 4169805
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||   | | ||    
T  4169685 agactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 4169784  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||| ||||||||||||    
T  4169785 caatcaaaccagtccctccgt 4169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 319273 - 319392
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 319372  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||| ||||||||||||    
T  319373 aatcaaaccagtccctccgt 319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 5437811 - 5437930
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||   ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5437910  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  5437911 aatcaaattagtccctccgt 5437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 33264382 - 33264501
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||   | | |||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtc 33264481  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  33264482 aatcaaatcagtccctccgt 33264501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 41761867 - 41761720
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | ||||||||||||| ||||||||  ||| ||||||||  |||||| ||||||||| | |||||||||||||||| |||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  270 caaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||   ||||||||||||||||  | ||||| | |||||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgtgtc 41761720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 168 - 315
Target Start/End: Original strand, 49523125 - 49523272
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 267  Q
    ||||||| |||||| | ||| ||||||||||||||||||   || ||||||| |||||||| ||||||||| | |||||||||||||||| ||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  268 atcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||   ||||||||||||||||  ||||||| | |||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgtg 49523272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 51013975 - 51013856
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||| |||||||||||||   | | |||    
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtc 51013876  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  51013875 aatcaaatcagtccctccgt 51013856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 41781539 - 41781689
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | || ||||||||||||||||||| |||| || ||||||||||||| | ||||||  | |||||||||||||||| ||||| ||    
T  41781539 gactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacatc 41781638  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  ||||||| |  ||||||||||||    
T  41781639 catcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgtgtc 41781689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 33266099 - 33265980
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    ||||||||||||||| | || |||||||||| ||||||||   |||||||| |||||||||| |||||||||||||||||||||||||||   | | |||    
T  33266099 gactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33266000  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  33265999 aatcaaatcagtccctccgt 33265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 43519613 - 43519689
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||||||| ||||||||| |||||| |||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  43519613 gtcagccatgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttctgtctcttttttcct 43519689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 35401749 - 35401868
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| ||||||||||||||||  |||||||| | ||||||| |||||||   | | |||    
T  35401749 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtc 35401848  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  35401849 aatcaaatcagtccctccgt 35401868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 49524822 - 49524703
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| |||||||||||||||| | ||||| | | |||||||||||||||   | | |||    
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 49524723  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||||||||| |||||    
T  49524722 aatcaaatcagtccttccgt 49524703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 39345567 - 39345683
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    |||||| ||||| | ||||||||||||||||||||||  ||| |||||||||||||||| ||||||| | | |||||||||||||||   | | ||| ||    
T  39345567 taatatttcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaat 39345666  T
Q  270 caaatcagtccctccgt 286  Q
    |||||||||| ||||||    
T  39345667 caaatcagtctctccgt 39345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 320989 - 320870
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  ||||||| ||| |||||||| ||||||||||||||||||| |||| ||   | | |||    
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtc 320890  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||| |||||||||||||    
T  320889 aatcaactcagtccctccgt 320870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 317
Target Start/End: Complemental strand, 35404548 - 35404419
Alignment:
Q  188 cttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtc 287  Q
    |||||||||||||||||||   || ||||||| | |||||| ||||||||  | ||| |||||||||||| |||||||||| ||||   |||| ||||||    
T  35404548 cttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtccaacaaaatggtccatccgtc 35404449  T
Q  288 caaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||  ||||||| | ||||||| |||||    
T  35404448 caaaagctccgttagtggtgatgacgtgtc 35404419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 317
Target Start/End: Original strand, 42980684 - 42980785
Alignment:
Q  216 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    |||| |||||||| |||||| || | ||||||||| |||||| |||||||||||||||   ||||||||||||||||  || |||| | |||||||||||    
T  42980684 gtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtg 42980783  T
Q  316 tc 317  Q
    ||    
T  42980784 tc 42980785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 39083685 - 39083773
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||||||||    
T  39083685 ttcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39083773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 43521177 - 43521109
Alignment:
Q  188 cttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||||| |||||||  ||||||||||   |||||||| |||||||||||||||||||||||||||    
T  43521177 cttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 48645254 - 48645374
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| |||||||  |||| ||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||    
T  48645254 agactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcctcgaatttacaaaatgt 48645353  T
Q  266 ccatcaaatcagtccctccgt 286  Q
     |||||||||||| |||||||    
T  48645354 tcatcaaatcagtacctccgt 48645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 20493827 - 20493946
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| ||||||||||||| ||||  ||| ||||| | |||||||| ||||||||| | ||||| |||||||||   | | |||    
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgtc 20493926  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  20493927 aatcaaatcagtccctccgt 20493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 11255873 - 11255811
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| ||||||||||||| |||| |||| ||||||| |||||||    
T  11255873 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcagt 11255811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 39189428 - 39189518
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaat 303  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||||||||||    
T  39189428 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttaat 39189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 48813787 - 48813937
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||   ||| ||  |||||||||||| | ||||||  | ||||| ||||||||||  |||||||    
T  48813787 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtc 48813886  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   |||||| |||||||||  || |||  | |||||||||||||    
T  48813887 catcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgtgtc 48813937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 5484586 - 5484674
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||||||||    
T  5484586 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 5484674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 39921540 - 39921628
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||||||||    
T  39921540 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39921628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 43779945 - 43779857
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||||||||||| ||||||||    
T  43779945 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 43779857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 48646825 - 48646721
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgat 312  Q
    ||||||| |||||||  ||||||||| | |||||||||||||||| ||||| | |||||||   |||| |||||||||||  | ||||| | ||||||||    
T  48646825 ttcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccgtccaaaagcttcgttagtggtgatgat 48646726  T
Q  313 gtgtc 317  Q
    |||||    
T  48646725 gtgtc 48646721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 44794868 - 44794765
Alignment:
Q  183 tagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccct 282  Q
    |||||| |||||||| | |  ||| |||| ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||    
T  44794868 tagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccct 44794769  T
Q  283 ccgt 286  Q
    ||||    
T  44794768 ccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 52868254 - 52868167
Alignment:
Q  186 tccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 273  Q
    ||||||||||||||||||||| |||| ||||||  | |||||| ||||||||| | |||||| ||||||||  |||||| | ||||||    
T  52868254 tccttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaa 52868167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 35996104 - 35996186
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||| ||||||||| |||| | | ||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||||||    
T  35996104 tcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaa 35996186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 11601692 - 11601792
Alignment:
Q  188 cttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtc 287  Q
    |||||||||| |||||||  |||| ||  ||||  |||||| | |||||| | ||||||||||||||||| |||||||||||||||  |||||||| |||    
T  11601692 cttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatat-atattagtccctgaattttacagacgtccatcaaaatagtccctctgtc 11601790  T
Q  288 ca 289  Q
    ||    
T  11601791 ca 11601792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 44558567 - 44558494
Alignment:
Q  217 tccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||| |||||||||    
T  44558567 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccttccgtccaa 44558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 51012116 - 51012193
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcctatg 394  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| | ||||| ||||||| |  |||||||||||    
T  51012116 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctatg 51012193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 32652145 - 32652233
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||  |||||  |||||||||||| |||||| |||||||    |||||||||||| |  |||||||||||||||| ||||||||    
T  32652145 ttcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 32652233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 42982522 - 42982422
Alignment:
Q  186 tccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccg 285  Q
    |||||||||||| |||||||  |||| |||||||||||||||| |||||||   | || |||| |||||||   | | ||| ||||||||||||||||||    
T  42982522 tccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatcagtccctccg 42982423  T
Q  286 t 286  Q
    |    
T  42982422 t 42982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 44994365 - 44994277
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||| ||||||| ||||||||    
T  44994365 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgtta 44994277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 2827468 - 2827527
Alignment:
Q  231 gaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||||||||| ||||||| |||||||  |||||||||||||||   ||||||||||||||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 2827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 27624869 - 27624912
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 273  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  27624869 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 27624912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 13451058 - 13450980
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 291  Q
    ||||||||  |||||  |||||||||||| |||||| |||||||  |||||||||||||||   |||||||| ||||||    
T  13451058 ttcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaaatggtccctccatccaaa 13450980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 35404378 - 35404324
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaac 371  Q
    |||||||||||||||  |||||| |||||||||| || |||| ||||||||||||    
T  35404378 cagccacgtgtacaatgactaaattgatggaaatggtaaaaattcgatatttaac 35404324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 47941852 - 47941930
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgt 286  Q
    |||| |||||| || |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  47941852 tcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 230483 - 230552
Alignment:
Q  214 tcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctc 283  Q
    |||||||| |||| | |||||||||||||||||| |||||||| ||| | ||| ||||| | ||||||||    
T  230483 tcgtccctcaattatgcgaaatatcaaattagtctctgaatttggcatatgtcgatcaatttagtccctc 230552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 377
Target Start/End: Original strand, 42980830 - 42980886
Alignment:
Q  321 cacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttca 377  Q
    |||||||||||  |||||| ||||||||||||| |||| |||| ||||||| |||||    
T  42980830 cacgtgtacaaagactaaattgatggaaattgtaaaaattcgagatttaacttttca 42980886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 167 - 315
Target Start/End: Complemental strand, 3152362 - 3152214
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| |  ||||| |||||| ||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  3152362 gactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3152263  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  3152262 catcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgtg 3152214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 167 - 315
Target Start/End: Original strand, 44794208 - 44794355
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||| |||  ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  44794208 gactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtc 44794306  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  44794307 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtg 44794355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 176 - 315
Target Start/End: Original strand, 2660221 - 2660360
Alignment:
Q  176 ctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatc 275  Q
    |||||| | ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||     
T  2660221 ctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaatt 2660320  T
Q  276 agtccctccgtccaaaatgtccgttaatagtgatgatgtg 315  Q
     |||||||||||||||| ||| |||||||  |||||||||    
T  2660321 cgtccctccgtccaaaaggtctgttaataacgatgatgtg 2660360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 165 - 317
Target Start/End: Complemental strand, 53190905 - 53190753
Alignment:
Q  165 gagactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacg 264  Q
    |||||||||| |||||| | ||||||||||||||||||||||  ||| |||||||||||||||| ||||||||| | |||||||||||||||| ||||||    
T  53190905 gagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 53190806  T
Q  265 tccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||||   ||||||||||||||||  ||||||| | ||||||| |||||    
T  53190805 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 53190753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 19987697 - 19987590
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtg 307  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||| ||| |||| |||||    
T  19987697 tcaatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtg 19987598  T
Q  308 atgatgtg 315  Q
    ||||||||    
T  19987597 atgatgtg 19987590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 41977750 - 41977900
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| | |||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    | |||||   ||||||||||||||||  | ||||||| ||||||| |||||    
T  41977850 cgtcaaaatggtccctccgtccaaaagcttcgttaatggtgatgacgtgtc 41977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 28626411 - 28626530
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 28626510  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  28626511 aatcaaattagtccctccgt 28626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 53187742 - 53187861
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53187841  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  53187842 aatcaaatcagtccctccgt 53187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 166 - 284
Target Start/End: Original strand, 3150251 - 3150369
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||   | | ||    
T  3150251 agactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 3150350  T
Q  266 ccatcaaatcagtccctcc 284  Q
    | |||||||||||||||||    
T  3150351 caatcaaatcagtccctcc 3150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 21348723 - 21348873
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| ||||||| |||||||| ||||||||| | |||||||||||||||| ||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 21348822  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  || |||| | ||||| |||||||    
T  21348823 catcaaaatggtccctccgtccaaaagctctgttagtggtgataatgtgtc 21348873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 27899225 - 27899075
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| ||||||| |||||||| ||||||||| | |||||||||||||||| ||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 27899126  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||| |||   ||||||||||||||||  ||||||| | ||||||| |||||    
T  27899125 cataaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 27899075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 167 - 301
Target Start/End: Original strand, 54898437 - 54898571
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | |||||||||||||||| |||||||     
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 54898536  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgtta 301  Q
    |||||||   ||| ||||||||||||  |||||||    
T  54898537 catcaaaatggtctctccgtccaaaagctccgtta 54898571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 35905837 - 35905706
Alignment:
Q  186 tccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccg 285  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||||||| | |||||||||||||||| ||||||| |||||||   |||||||||    
T  35905837 tccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccg 35905738  T
Q  286 tccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||  |||| || | ||||||| |||||    
T  35905737 tccaaaagctccggtagtggtgatgacgtgtc 35905706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 46308807 - 46308926
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46308906  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  46308907 aatcaaatcagtccctccgt 46308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 2226296 - 2226146
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| |||||||||||||||| ||||||||| | |||||||||||||||| |||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||    |||||||||||||||  || |||| | ||||||| |||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatgacgtgtc 2226146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 317
Target Start/End: Original strand, 51684610 - 51684760
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    ||||||||||||||| | ||||||||||||| |||||||   ||| ||| |||||||||||| | ||||||| | ||||||| |||||||| ||||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtc 51684709  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||   ||||||||||||||||  ||||||| | |||||||||||||    
T  51684710 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtc 51684760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 38193600 - 38193480
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | | ||    
T  38193600 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 38193501  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | ||||||||||||| |||||    
T  38193500 caatcaaatcagtccatccgt 38193480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 46310526 - 46310406
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||| ||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||   | | ||    
T  46310526 agactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 46310427  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||| ||||||||||||    
T  46310426 caatcaaaccagtccctccgt 46310406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 46611392 - 46611273
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtc 46611293  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  46611292 aatcaaatcagtccctccgt 46611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 53094362 - 53094243
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53094263  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  53094262 aatcaaatgagtccctccgt 53094243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 54900163 - 54900044
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||| ||||||||||||   | | |||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtc 54900064  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  54900063 aatcaaatcagtccctccgt 54900044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 41979441 - 41979352
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  41979441 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 317
Target Start/End: Original strand, 43765139 - 43765287
Alignment:
Q  169 ctaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcca 268  Q
    |||||| |||||| | ||||||||||||| |||||||| |||| ||||| || ||||||| ||||||||| | |||||  ||||||||| ||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  269 tcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||   |||||||| |||||||  ||||||| | |||||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtc 43765287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 38191895 - 38192014
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||| |||||| |||||| |  |||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38191994  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  38191995 aatcaaatcagtccctccgt 38192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 46609149 - 46609264
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    ||||||||||||||| | || |||||||||| ||||||||  ||||||||||||||||||||  ||||||||||||||||||||||||||   | | |||    
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 46609248  T
Q  267 catcaaatcagtccct 282  Q
     |||||||||||||||    
T  46609249 aatcaaatcagtccct 46609264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 2660401 - 2660477
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    ||||||||| |||||||| |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  2660401 gtcagccacttgtacaaggactaaattgatggaaattgtcaaaatttgatatttaacatttcagtctcttttttcct 2660477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 2661988 - 2661880
Alignment:
Q  176 ctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatc 275  Q
    |||||| | ||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||   | | ||| ||||||||    
T  2661988 ctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatc 2661889  T
Q  276 agtccctcc 284  Q
    |||||||||    
T  2661888 agtccctcc 2661880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 44794396 - 44794472
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctcttttttcct 391  Q
    |||||||||||||||||| |||||| |||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  44794396 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaatttgatatttaacatttcagtctcttttttcct 44794472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 17515309 - 17515460
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| |  |||||||||||| |||||| |  ||| ||| || ||||||||| ||||||||| | |||||||||||||||| || ||||    
T  17515309 agactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 17515408  T
Q  266 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||||   ||||||| |||||||||  |||||| | |||||||||||||    
T  17515409 ccatcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgtgtc 17515460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 286
Target Start/End: Complemental strand, 2379071 - 2378953
Alignment:
Q  168 actaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcc 267  Q
    ||||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||| | ||||| | | ||||||| |||||||   | | |||     
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtca 2378972  T
Q  268 atcaaatcagtccctccgt 286  Q
    |||||||||||||||||||    
T  2378971 atcaaatcagtccctccgt 2378953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 23293314 - 23293164
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | || |||||||||  |||||||   ||| |||| || |||||||| ||||||||| | ||||||| |||||||| || |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||  |||||||||||||||||  ||||||| | |||||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtc 23293164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 30600062 - 30599912
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||| |||||| | ||||||  ||| || ||||||||||||| ||||||||| | ||||||||||||||||  |||||||    
T  30600062 gactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtc 30599963  T
Q  267 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
     ||||||   ||||||||||||||||  || |||| | |||||||||||||    
T  30599962 gatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 30599912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 23291569 - 23291689
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| || ||| | ||||||||||||||||||||||  ||| |||||||||||||||| ||||||||| | |||||| ||||||||   | | ||    
T  23291569 agactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgt 23291668  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | |||||||||||||||||||    
T  23291669 caatcaaatcagtccctccgt 23291689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 53092623 - 53092742
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||| || |||||| |||||| |  |||||||||||||||||||| ||||||||||||||| |||||||||||   | | |||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtc 53092722  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  53092723 aatcaaatcagtccctccgt 53092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 46112486 - 46112612
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | ||||||||||||||||||||||  ||| |||||   |||||||| | ||||||| | ||||||| |||||||| |||||||    
T  46112486 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgt 46112585  T
Q  266 ccatcaaatcagtccctccgtccaaaa 292  Q
    ||||||||   |||||||||| |||||    
T  46112586 ccatcaaaatggtccctccgttcaaaa 46112612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 35903825 - 35903914
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | ||||||||||||| |||||||   ||||||| |||||||||||| | |||||||||||||||||||||||||    
T  35903825 gactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    |||||||| |||||| | ||||||||||||| ||||||||   |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 611312 - 611192
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    ||||||||| |||||| | |||||||||||||||||||||   ||| |||||||||||||||||||||||| | | |||| ||||||||||   | | ||    
T  611312 agactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgt 611213  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    | ||||||| |||||||||||    
T  611212 caatcaaattagtccctccgt 611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 19987552 - 19987479
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagtctctttttt 388  Q
    ||||| |||||||||||| |||||| |||||||||| ||||||| |||| ||||||| ||||||||||||||||    
T  19987552 gtcagtcacgtgtacaaggactaaattgatggaaatggtcaaaattcgagatttaacgtttcagtctctttttt 19987479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 42279510 - 42279657
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatc-gatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcca 268  Q
    ||||| |||||| | ||| ||||||||| ||||||| | |||||| |||| | ||||||| | ||||||| | |||||||||||||||| |||||||| |    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaatt-cgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtcta 42279608  T
Q  269 tcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||   ||||||||||||||||  || |||| | |||||||||||||    
T  42279609 tcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 42279657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 7883328 - 7883447
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||  | ||| ||||||||| ||||||||  ||||||||||||| ||||||  |||||||||||||||| |||||||||   | |  ||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttc 7883427  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  7883428 aatcaaatcagtccctccgt 7883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 54412633 - 54412519
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    |||||||||||| | |||| ||||||||||||||| | |||| ||||||| |||||||| ||| ||||| | ||||| |||||||||   | | ||| ||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaat 54412534  T
Q  270 caaatcagtccctcc 284  Q
    |||||||||||||||    
T  54412533 caaatcagtccctcc 54412519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 317
Target Start/End: Original strand, 2377051 - 2377179
Alignment:
Q  189 ttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcc 288  Q
    ||||||||| |||||| || ||| |||||||||||||||| | ||| ||  | |||||| ||||||||| |||||||||||||||   || ||||||||     
T  2377051 ttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccatcaaaatggttcctccgtct 2377150  T
Q  289 aaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||  ||||||| | ||||||| |||||    
T  2377151 aaaagctccgttagtggtgatgacgtgtc 2377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 3152173 - 3152113
Alignment:
Q  315 gtcagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacattt 375  Q
    |||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||| ||||    
T  3152173 gtcagccacgtgtacaaggactaaattgatggaaatagtcaaaattcgatatttaaaattt 3152113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 30598337 - 30598456
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| |||||||| |||| || ||||||||||||| ||||||| | | || |||| |||||||   | | |||    
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 30598436  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  30598437 aatcaaattagtccctccgt 30598456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 23774198 - 23774268
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctc 283  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||  ||||||||    
T  23774198 ttcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaagtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 48633918 - 48634000
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    |||| ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||   ||||||||||||||    
T  48633918 tcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 48634000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 46197750 - 46197867
Alignment:
Q  197 taaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtc 296  Q
    |||||| ||| |||| |||||| ||||||||| | ||||||| | ||||| |||||||||| ||||||||||| |||   |||||| |||||||||  ||    
T  46197750 taaaaactcggtcaaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttc 46197849  T
Q  297 cgttaatagtgatgatgt 314  Q
    ||||| |  |||||||||    
T  46197850 cgttagtgatgatgatgt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 286
Target Start/End: Complemental strand, 42282559 - 42282443
Alignment:
Q  170 taatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 269  Q
    ||||| |||||| | ||||||||||||| |||||||  |||| |||||  ||||||||| ||||||||| | ||||||| |||||||   | | || |||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttcat 42282460  T
Q  270 caaatcagtccctccgt 286  Q
     ||||||||||||||||    
T  42282459 taaatcagtccctccgt 42282443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 25535317 - 25535250
Alignment:
Q  223 aatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||||||||| || |||||||||||||||  |||||||||| |||||   |||||||||||||    
T  25535317 aatttttcgaaatattaagttagtccctgaatttaacagacgtccaccaaattcatccctccgtccaa 25535250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 44267981 - 44268100
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | ||||||||||||| ||||||||  ||| ||| || ||||||||| ||||||| | | || |||| |||||||   | | |||    
T  44267981 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaaatgtc 44268080  T
Q  267 catcaaatcagtccctccgt 286  Q
     |||||||||||||||||||    
T  44268081 aatcaaatcagtccctccgt 44268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  245 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatga 311  Q
    ||||||||||||| |||||||||||||||   ||||||||||||||||  ||||||| | |||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 23293123 - 23293061
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| ||||||| |||||||    
T  23293123 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagt 23293061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 23888850 - 23888772
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaa 291  Q
    ||||||||| |||| | ||||||||||  |||||||||||||||  || ||||||||||||   |||||||||||||||    
T  23888850 ttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaaggtccctccgtccaaa 23888772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 30599871 - 30599809
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| ||||||| |||||||    
T  30599871 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagt 30599809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 35905666 - 35905604
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| ||||||||||||| |||| |||| | ||||| |||||||    
T  35905666 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagacttaacttttcagt 35905604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 44276149 - 44276087
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| ||||||| |||||||    
T  44276149 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagt 44276087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 45898423 - 45898349
Alignment:
Q  216 gtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||||| | ||||||||||| ||||||| |||||||  |||||||| ||||||   ||||||||||||||    
T  45898423 gtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaaggtccctccgtccaa 45898349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttt 228  Q
    |||||||| |||||| | ||||||||||||||||||||||  ||| | ||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 23877044 - 23876979
Alignment:
Q  225 tttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||| ||||||||||||||||| ||||||||  || |||||||||||||   |||||||||||||    
T  23877044 ttttttgaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtccaa 23876979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 40508989 - 40508912
Alignment:
Q  213 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||   ||||||||||||||    
T  40508989 ttcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaatgtccctccgtccaa 40508912  T

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Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 43765328 - 43765388
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttca 377  Q
    |||||||||||||||  |||||| |||||||||| || ||||||||| ||||||| |||||    
T  43765328 cagccacgtgtacaatgactaaattgatggaaatggtaaaaaatcgagatttaacttttca 43765388  T

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Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 48830896 - 48830800
Alignment:
Q  221 tgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    |||||||  ||||||||| | ||||||  |||||||| | |||||||||||||   ||||||||||||||||  || |||| | |||||||||||||    
T  48830896 tgaatttaacgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 48830800  T

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Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 44276265 - 44276190
Alignment:
Q  242 ttagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtc 317  Q
    ||||||| |||||||| |||||| ||||||||   ||||||||||||||||  || |||| | |||||||||||||    
T  44276265 ttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 44276190  T

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Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 17515501 - 17515563
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| | || ||||||| |||||||    
T  17515501 cagccacgtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcagt 17515563  T

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Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 33113254 - 33113184
Alignment:
Q  217 tccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtc 287  Q
    ||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  33113254 tccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

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Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 54898627 - 54898689
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    |||||||||||||||| |||||| |||||||||| || |||| |||| | ||||| |||||||    
T  54898627 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagt 54898689  T

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Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 600725 - 600805
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtc 247  Q
    |||||||| |||||| |  |||||||||||||||||||||| ||| || || | |||||||| | ||||||| | ||||||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

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Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 31887513 - 31887453
Alignment:
Q  230 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaa 290  Q
    ||||||||||| |||||||||||||||  |||| ||| ||||||   ||||||||||||||    
T  31887513 cgaaatatcaacttagtccctgaatttgtcagatgtctatcaaaaaggtccctccgtccaa 31887453  T

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Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 41147910 - 41147862
Alignment:
Q  208 tcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 256  Q
    ||||||| |||||||||||||| |||||| || | ||||||||||||||    
T  41147910 tcaatttagtccctgaattttttgaaatagcacaatagtccctgaattt 41147862  T

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Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 51686483 - 51686367
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||| | |||||| |||||| |||||||   ||| ||||||||| |||||| ||||||||  | |||||||  ||||||   | | ||     
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgtt 51686384  T
Q  267 catcaaatcagtccctc 283  Q
    |||||||||||||||||    
T  51686383 catcaaatcagtccctc 51686367  T

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Target: scaffold0081 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 54347 - 54228
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 54248  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  54247 aatcaaattagtccctccgt 54228  T

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Target: scaffold1712 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 982 - 1101
Alignment:
Q  167 gactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||   ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 1081  T
Q  267 catcaaatcagtccctccgt 286  Q
     ||||||| |||||||||||    
T  1082 aatcaaattagtccctccgt 1101  T

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Target: scaffold1454 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 1281 - 1407
Alignment:
Q  185 gtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 284  Q
    |||||||||||||||||||| | | || ||||||| ||||||||  |||||||| | |||||||||||||||| |||||||||||||||   ||||||||    
T  1281 gtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctcc 1380  T
Q  285 gtccaaaatgtccgttaatagtgatga 311  Q
    ||||||||  ||||||| | |||||||    
T  1381 gtccaaaagctccgttagtggtgatga 1407  T

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Target: scaffold0345 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 1645 - 1525
Alignment:
Q  166 agactaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 265  Q
    |||||||||  ||||| | |||||||||||||||||||||| |||| ||||||||||||||||   ||||| ||| |||||||||||||||   | | ||    
T  1645 agactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgt 1546  T
Q  266 ccatcaaatcagtccctccgt 286  Q
    |  ||||||||||||||||||    
T  1545 cattcaaatcagtccctccgt 1525  T

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Target: scaffold0564 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 8451 - 8513
Alignment:
Q  317 cagccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttcagt 379  Q
    ||||||||||||||||||||||| |||||||||| || |||| |||| ||||||| |||||||    
T  8451 cagccacgtgtacaagtactaaattgatggaaatggtaaaaattcgagatttaacttttcagt 8513  T

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Target: scaffold0564; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 273
Target Start/End: Original strand, 8264 - 8366
Alignment:
Q  169 ctaatatctcaaaatagtccttgaattttaaaaaatcgatcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtcca 268  Q
    |||||| |||||| | |||||||||||||||||||| |  ||| ||||| | |||||||| | ||||||| | ||||||||||||||||  | |||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttt--atacgtcca 8361  T
Q  269 tcaaa 273  Q
    |||||    
T  8362 tcaaa 8366  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 376
Target Start/End: Original strand, 37398 - 37454
Alignment:
Q  320 ccacgtgtacaagtactaaactgatggaaattgtcaaaaatcgatatttaacatttc 376  Q
    ||||||||||||| |||||  ||||||||||||| |||| |||| ||||||| ||||    
T  37398 ccacgtgtacaaggactaatttgatggaaattgtaaaaattcgaaatttaacttttc 37454  T

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