View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11123_high_22 (Length: 307)
Name: NF11123_high_22
Description: NF11123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11123_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 8236754 - 8237044
Alignment:
| Q |
1 |
cggatttggaatggctttcgcatttcgttgaagattctgattccttctctggaatggctttaacaacaacaacggagaaaaaccctaaaagccttgttgt |
100 |
Q |
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| T |
8236754 |
cggatttggaatggctttcgcatttcgttgaagattctgattccttctctggaatggctttaacaacaacaacggagaaaaaccctaaaagctttgttgt |
8236853 |
T |
|
| Q |
101 |
gtttgaagagcctaagccgaaacaagaaaacccggtttttaatactttcaaaacaccggttcagaccaaagctaggagcaaaagagccagaaccggtgtt |
200 |
Q |
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||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8236854 |
gtttgaagagcctaagccgaaacaagaaaactcagtttttactactttcaaaacaccggttcagaccaaagctaggagcaaaagagccagaaccggtgtt |
8236953 |
T |
|
| Q |
201 |
agggtttggccattcgggtcaaccgattcttcttcaagctcaaccaccaccacaacttcatcttcaacctcttcatctccaaccagtccct |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8236954 |
agggtttggccattcgggtcaaccgattcttcttcaagctcaaccaccaccacaacttcatcttcaacctcttcatctccaaccagtccct |
8237044 |
T |
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