View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11123_low_19 (Length: 345)
Name: NF11123_low_19
Description: NF11123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11123_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 11 - 294
Target Start/End: Original strand, 8759393 - 8759676
Alignment:
| Q |
11 |
cacagagtgtcacgctcacgcaatacaaaagtaggacattaaagaaaggaagaccctacactaaaactaacatcaaatttcacgtttatttccttgcctt |
110 |
Q |
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| T |
8759393 |
cacagagtgtcacgctcacgcaatacaaaagtaggacattaaagaaaggaagaccctacactaaaactaacatcaaatttcacgtttatttccctgcctt |
8759492 |
T |
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| Q |
111 |
ccaccaaggaagaccctattctttttaaagaaagaaagcttctggctaacggtgtgaaggattctattgcacttttctaaatacattccatttgtaaaaa |
210 |
Q |
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| T |
8759493 |
ccaccaaggaagaccctattatttttaaagaaagaaagcttctggctaacggtgtgaaggattctattgcacttttctaaatacattccatttgtaaaaa |
8759592 |
T |
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| Q |
211 |
tattcacccctccctatatatagaattctacaagtaaatcacgggaaaaagtaaaaagtttgtttgactatgctggaagttgca |
294 |
Q |
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| T |
8759593 |
tattcacccctccctatatatagaattctacaagtaaatcacgggaaaaagtaaaaagtttgtttgactatgctagaagttgca |
8759676 |
T |
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