View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11123_low_36 (Length: 250)
Name: NF11123_low_36
Description: NF11123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11123_low_36 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 28529022 - 28529264
Alignment:
| Q |
8 |
gagcacagaccaagttttgatgtcacagtgatttcatcaaactcacctctaatccgaacatgcgcttagtatgtaataaaaaattataatatgagatggt |
107 |
Q |
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| T |
28529022 |
gagcaccgaccaagttttgatgtcacagtgatttcatcaaactcacctctaatccgaacatgcgcttagtatgtaataaaaaattataatatgagatggt |
28529121 |
T |
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| Q |
108 |
aaactaaaatactcatctaacagtacattttgttcaatacatctttattcttaccattgttcaatatatgatttttaattgaaataaaattagttcaata |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28529122 |
aaactaaaatactcatctaacagtacattttgttcaatacatctttattcttaccattgttcaatatatgatttttaattgaaataaaattagttcaata |
28529221 |
T |
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| Q |
208 |
tactacacatattatacttgatctagttgtgacattttccatt |
250 |
Q |
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| T |
28529222 |
tactacacatattatacttgatctagttgtgacattttccatt |
28529264 |
T |
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