View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11125_low_33 (Length: 251)
Name: NF11125_low_33
Description: NF11125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11125_low_33 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 8656764 - 8656528
Alignment:
| Q |
15 |
gaacaactagaaacatggttcatcaaaagagattagcaagttcaaacagatcccatttatctccaccaatatcccacgttttaatttcactttgattgta |
114 |
Q |
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| T |
8656764 |
gaacaactagaaacatggttcatcaaaagagattagcaagttcaaacagatcccatttatctccaccaatatcccacattttaatttcactttgattgta |
8656665 |
T |
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| Q |
115 |
atgcttactctttcttaagaggagacaaagatctgtatgtatactaacgattactcatacgtattcatttatcattctctacaaaaagttggtgaaagat |
214 |
Q |
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| T |
8656664 |
atgcttactctttcttaagaggagacaaagatctgtatgtatactaacgattactcatacgtattcatttatcattctctacaaaaagttggtgaaagat |
8656565 |
T |
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| Q |
215 |
ttatcactcattcccaccaaacacccaaagagagcct |
251 |
Q |
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| T |
8656564 |
ttatcactcattcccaccaaacacccaaagagagcct |
8656528 |
T |
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