View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11126_low_23 (Length: 239)
Name: NF11126_low_23
Description: NF11126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11126_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 44450196 - 44449975
Alignment:
| Q |
1 |
ttggtcattagatggggttaaagatctaactgtttgctttgatgcaaccagtctagcgtactgcagtgacttcctactgatccaacttctagtaccaaaa |
100 |
Q |
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| T |
44450196 |
ttggtcattagatggggttaaagatctaactgtttgctttgacgcaaccagtctagcgtactgcagtgacttcctactgatccaacttctagtaccaaaa |
44450097 |
T |
|
| Q |
101 |
tgttgtgaaagctcagctctttcttgaccaaagtgcaagtttaatactttgacattttgtgtccctaagctacctgtgatatgtttaatgacccaaataa |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44450096 |
tgttgtgaaaactcagctctttcttgaccaaagtgcaagtttaatactttgacattttgtgtccctaagctacctgtgatatgtttaatgacccaaataa |
44449997 |
T |
|
| Q |
201 |
ccattatttttggggaccaaac |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
44449996 |
ccattatttttggggaccaaac |
44449975 |
T |
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