View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11127_high_10 (Length: 504)
Name: NF11127_high_10
Description: NF11127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11127_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 1 - 499
Target Start/End: Original strand, 44670686 - 44671200
Alignment:
| Q |
1 |
atgctctcaaatcactcatggctactaatag------ctagtacttttattcaatgtacaaatgcattaatgttacggtcatcaatatctgataatgcat |
94 |
Q |
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| T |
44670686 |
atgctctcaaatcactcatggctactaatagtaatagctattacttttatgcaatgtacaaatgcattaatgttacggtcatcaatatctgataatgcat |
44670785 |
T |
|
| Q |
95 |
tgtatatgcttttgttttactcttatctcatgtatgcattcttgaaaacatttgtgctaagtgccaatttgcgattagcacaaacaaattgattttaatt |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44670786 |
tgtatatgcttttgttttactcttatctcatgtatgcattcttgaaaacatttgtgctaagtgccaatttgcgattagcacaaacaaattgattttaatt |
44670885 |
T |
|
| Q |
195 |
actcaaacacaacctcattcgttaggcagaccaagatttcaaggtacaaacttttaataatactttcttcacaattgttttgtttgaaatatatcttctg |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44670886 |
actcaaacacaacctcattcgttaggcagaccaagatttcaaggtacaaacttttaataatactttcttcacaattgttttgtttgaaatatatcttctg |
44670985 |
T |
|
| Q |
295 |
ctaagatcatgaatctaaatcccaagaatgaccagagttcatcaataagaaagtagggggaggaaatgcaaggtgcataataaaaccatcacgttccgta |
394 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
44670986 |
ctaagatcatgaatctaaatcccaagaatgaccagagttcatcaagaagaaagtagggggaggaaatgcaaggtgcataataaaaccatgacgttccgta |
44671085 |
T |
|
| Q |
395 |
gtagtttatttcacaacctaaaagggattgattaatacaatttaatttaatcctcctccctaa------------tatggatattacttattaacatttc |
482 |
Q |
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||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
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| T |
44671086 |
gtagtttattt--caacctaaaagggatagattaatacaatttaatttaatcctcctccctaatatgatatcgactatggttattacttattaacatttc |
44671183 |
T |
|
| Q |
483 |
ttcatttctctgcttct |
499 |
Q |
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|||||||||||| |||| |
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| T |
44671184 |
ttcatttctctgtttct |
44671200 |
T |
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