View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11127_high_29 (Length: 289)
Name: NF11127_high_29
Description: NF11127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11127_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 29125530 - 29125400
Alignment:
| Q |
15 |
agttgctttggagaagaatacagatttacactgacagtgtgtgtcactctctcgtcgtctcgttctaaaaagcttttaactaccaaacaaccgcactcag |
114 |
Q |
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| T |
29125530 |
agttgctttggagaagaatacagatttacactgacagtgtgtgtcactctctcgtcgtctcgttctaaaaagcttttaactaccaaacaaccgcactcag |
29125431 |
T |
|
| Q |
115 |
ttgctttctatttccagctgcacaaagactc |
145 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
29125430 |
ttgctttctatttccagctgcacaaagactc |
29125400 |
T |
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