View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11127_low_21 (Length: 359)

Name: NF11127_low_21
Description: NF11127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11127_low_21
NF11127_low_21
[»] chr2 (61 HSPs)
chr2 (16-308)||(39732742-39733033)
chr2 (79-283)||(15224732-15224938)
chr2 (77-272)||(36347590-36347787)
chr2 (118-286)||(23748135-23748304)
chr2 (118-310)||(39821709-39821902)
chr2 (82-280)||(36566891-36567093)
chr2 (176-311)||(42316775-42316909)
chr2 (135-309)||(16565832-16566012)
chr2 (81-285)||(36046240-36046443)
chr2 (135-281)||(19566860-19567008)
chr2 (75-286)||(31795804-31796012)
chr2 (124-264)||(28262500-28262641)
chr2 (135-286)||(40022427-40022582)
chr2 (84-282)||(8426918-8427110)
chr2 (173-274)||(34209560-34209661)
chr2 (77-312)||(9631556-9631805)
chr2 (126-242)||(12541813-12541931)
chr2 (129-265)||(37739949-37740085)
chr2 (162-259)||(17379897-17379994)
chr2 (222-311)||(1583222-1583311)
chr2 (81-279)||(9426987-9427188)
chr2 (139-230)||(2241471-2241563)
chr2 (161-285)||(12751899-12752023)
chr2 (76-204)||(35736172-35736302)
chr2 (129-283)||(7681299-7681450)
chr2 (124-264)||(39354231-39354372)
chr2 (156-242)||(32503238-32503324)
chr2 (122-226)||(6721717-6721822)
chr2 (192-276)||(27926668-27926752)
chr2 (124-229)||(29525823-29525931)
chr2 (79-286)||(45257307-45257516)
chr2 (161-276)||(35325353-35325468)
chr2 (79-210)||(41778773-41778906)
chr2 (70-211)||(41841673-41841816)
chr2 (79-212)||(886919-887051)
chr2 (79-215)||(31061359-31061497)
chr2 (228-305)||(14196820-14196897)
chr2 (252-311)||(23748105-23748164)
chr2 (162-216)||(18811413-18811467)
chr2 (234-303)||(14187092-14187161)
chr2 (183-286)||(887222-887319)
chr2 (125-181)||(9591975-9592032)
chr2 (248-309)||(24078986-24079047)
chr2 (248-309)||(44482202-44482263)
chr2 (158-215)||(45098250-45098307)
chr2 (254-286)||(39821704-39821736)
chr2 (169-216)||(31928149-31928196)
chr2 (74-215)||(42296409-42296552)
chr2 (158-264)||(3094410-3094516)
chr2 (162-212)||(33265691-33265741)
chr2 (105-150)||(36566876-36566922)
chr2 (75-112)||(8554462-8554499)
chr2 (167-216)||(20545799-20545848)
chr2 (162-203)||(21662327-21662368)
chr2 (279-312)||(23748307-23748340)
chr2 (279-312)||(31061358-31061391)
chr2 (82-150)||(31795772-31795841)
chr2 (168-264)||(15085757-15085853)
chr2 (234-310)||(22355976-22356052)
chr2 (75-150)||(22356176-22356252)
chr2 (189-285)||(42813732-42813828)
[»] chr8 (63 HSPs)
chr8 (79-307)||(1026863-1027092)
chr8 (75-312)||(7502963-7503202)
chr8 (76-286)||(31543107-31543319)
chr8 (73-312)||(9718488-9718729)
chr8 (118-286)||(16652989-16653158)
chr8 (85-286)||(1281149-1281352)
chr8 (118-282)||(11575445-11575610)
chr8 (76-275)||(11033416-11033616)
chr8 (129-307)||(29358354-29358532)
chr8 (75-249)||(42650405-42650579)
chr8 (79-270)||(6315066-6315255)
chr8 (124-282)||(11785572-11785731)
chr8 (81-286)||(30479752-30479959)
chr8 (135-276)||(37923123-37923265)
chr8 (79-275)||(13404976-13405178)
chr8 (76-276)||(7979137-7979339)
chr8 (122-310)||(30664405-30664597)
chr8 (135-284)||(31738480-31738630)
chr8 (77-286)||(2248450-2248661)
chr8 (129-287)||(40990215-40990377)
chr8 (161-286)||(36308927-36309052)
chr8 (79-277)||(4247562-4247764)
chr8 (124-259)||(37032425-37032561)
chr8 (76-281)||(28083739-28083946)
chr8 (119-285)||(41103540-41103709)
chr8 (79-286)||(12022178-12022387)
chr8 (77-237)||(33922523-33922680)
chr8 (124-311)||(3726863-3727053)
chr8 (124-285)||(10028156-10028331)
chr8 (168-311)||(9933332-9933475)
chr8 (82-274)||(24243096-24243287)
chr8 (129-276)||(29690967-29691118)
chr8 (129-286)||(16024204-16024362)
chr8 (168-286)||(43732778-43732896)
chr8 (75-286)||(30365126-30365339)
chr8 (161-246)||(35694830-35694915)
chr8 (118-215)||(38198155-38198252)
chr8 (194-280)||(34634260-34634346)
chr8 (252-312)||(16652957-16653018)
chr8 (82-311)||(20472702-20472933)
chr8 (158-215)||(27487071-27487128)
chr8 (125-215)||(30581916-30582010)
chr8 (125-216)||(5562012-5562102)
chr8 (77-150)||(43732859-43732933)
chr8 (253-286)||(11575582-11575615)
chr8 (186-283)||(34196418-34196514)
chr8 (75-150)||(3726859-3726935)
chr8 (234-286)||(8815298-8815350)
chr8 (159-199)||(34633819-34633859)
chr8 (161-284)||(6453268-6453391)
chr8 (249-292)||(11785555-11785598)
chr8 (79-149)||(31543072-31543143)
chr8 (234-309)||(35694742-35694817)
chr8 (253-312)||(37032389-37032447)
chr8 (158-203)||(8671912-8671957)
chr8 (79-311)||(8815141-8815385)
chr8 (276-308)||(2412967-2412999)
chr8 (279-311)||(4247732-4247764)
chr8 (254-286)||(7503131-7503163)
chr8 (167-215)||(26167846-26167894)
chr8 (254-286)||(31543249-31543281)
chr8 (279-311)||(31738635-31738667)
chr8 (279-311)||(43732899-43732931)
[»] chr4 (68 HSPs)
chr4 (75-286)||(45741886-45742099)
chr4 (79-286)||(31348356-31348565)
chr4 (77-305)||(46007715-46007947)
chr4 (79-286)||(54935067-54935278)
chr4 (79-286)||(54320435-54320643)
chr4 (77-312)||(47433717-47433955)
chr4 (83-309)||(27735749-27735987)
chr4 (124-286)||(49735503-49735666)
chr4 (76-258)||(26166934-26167118)
chr4 (79-286)||(1968386-1968603)
chr4 (139-275)||(36151637-36151773)
chr4 (169-312)||(34110897-34111039)
chr4 (130-286)||(35248738-35248895)
chr4 (135-282)||(5730869-5731017)
chr4 (76-264)||(16400797-16400987)
chr4 (123-312)||(24565345-24565543)
chr4 (122-286)||(28332848-28333013)
chr4 (79-282)||(29798288-29798490)
chr4 (130-286)||(41174397-41174554)
chr4 (122-286)||(44784036-44784200)
chr4 (124-286)||(17938142-17938306)
chr4 (81-282)||(2247842-2248043)
chr4 (124-285)||(45132533-45132693)
chr4 (124-285)||(6891406-6891568)
chr4 (79-220)||(37711138-37711286)
chr4 (158-311)||(43961491-43961644)
chr4 (134-223)||(2917061-2917151)
chr4 (158-312)||(55080660-55080814)
chr4 (79-282)||(21694929-21695132)
chr4 (75-309)||(17182495-17182733)
chr4 (118-280)||(55510210-55510371)
chr4 (76-212)||(22920978-22921117)
chr4 (76-212)||(22970682-22970821)
chr4 (158-308)||(22186800-22186950)
chr4 (76-286)||(47846090-47846303)
chr4 (79-311)||(56135749-56135965)
chr4 (224-312)||(6938394-6938492)
chr4 (237-310)||(41227494-41227567)
chr4 (162-260)||(14539357-14539455)
chr4 (254-311)||(4437601-4437658)
chr4 (168-264)||(34108283-34108379)
chr4 (158-274)||(34995132-34995246)
chr4 (169-286)||(54576362-54576479)
chr4 (79-311)||(7977505-7977741)
chr4 (170-286)||(37761557-37761673)
chr4 (186-274)||(54001153-54001238)
chr4 (234-311)||(23813111-23813188)
chr4 (227-308)||(54167147-54167228)
chr4 (85-156)||(6938287-6938359)
chr4 (79-150)||(49735468-49735540)
chr4 (79-149)||(6938420-6938491)
chr4 (169-212)||(11842399-11842442)
chr4 (173-216)||(41227576-41227619)
chr4 (119-216)||(23813142-23813240)
chr4 (162-208)||(54494723-54494769)
chr4 (249-283)||(54935106-54935140)
chr4 (77-150)||(54935241-54935315)
chr4 (158-215)||(18516577-18516634)
chr4 (248-309)||(18810659-18810720)
chr4 (183-276)||(36278357-36278450)
chr4 (279-312)||(41174557-41174590)
chr4 (279-312)||(53260717-53260750)
chr4 (169-205)||(23332650-23332686)
chr4 (75-150)||(37711295-37711371)
chr4 (279-311)||(37711335-37711367)
chr4 (163-215)||(47694435-47694487)
chr4 (279-311)||(54935281-54935313)
chr4 (235-311)||(56427057-56427133)
[»] chr3 (68 HSPs)
chr3 (79-311)||(21773782-21774016)
chr3 (79-286)||(41110356-41110565)
chr3 (76-312)||(220407-220644)
chr3 (77-312)||(37102158-37102385)
chr3 (124-311)||(30200098-30200289)
chr3 (79-311)||(24560217-24560461)
chr3 (79-286)||(25655005-25655216)
chr3 (124-307)||(52185061-52185243)
chr3 (119-311)||(41039950-41040153)
chr3 (156-286)||(16275740-16275870)
chr3 (70-282)||(9312510-9312722)
chr3 (157-286)||(36568939-36569067)
chr3 (135-282)||(18654639-18654787)
chr3 (84-286)||(52473920-52474124)
chr3 (124-269)||(14898022-14898172)
chr3 (118-264)||(2387817-2387964)
chr3 (127-276)||(37807129-37807279)
chr3 (124-286)||(46556189-46556353)
chr3 (81-248)||(43005812-43005981)
chr3 (118-311)||(651771-651969)
chr3 (129-286)||(27541966-27542124)
chr3 (135-266)||(10748345-10748484)
chr3 (130-270)||(55327422-55327563)
chr3 (76-220)||(28582610-28582756)
chr3 (124-224)||(46204932-46205033)
chr3 (158-310)||(40858646-40858798)
chr3 (158-311)||(48683693-48683848)
chr3 (124-273)||(40463919-40464069)
chr3 (83-277)||(12790377-12790573)
chr3 (168-311)||(42772123-42772266)
chr3 (79-215)||(27197755-27197893)
chr3 (158-311)||(41414159-41414313)
chr3 (162-286)||(34641077-34641199)
chr3 (77-218)||(54574464-54574602)
chr3 (216-286)||(28581221-28581291)
chr3 (249-307)||(46978441-46978499)
chr3 (185-230)||(13082953-13082998)
chr3 (161-218)||(51819228-51819285)
chr3 (162-286)||(24253807-24253931)
chr3 (254-312)||(651739-651798)
chr3 (248-311)||(34641002-34641065)
chr3 (252-311)||(37102324-37102383)
chr3 (118-308)||(42699625-42699816)
chr3 (125-215)||(54996786-54996874)
chr3 (256-312)||(2387939-2387995)
chr3 (75-150)||(24253894-24253970)
chr3 (145-216)||(23027989-23028060)
chr3 (158-215)||(16884077-16884134)
chr3 (234-311)||(40858575-40858652)
chr3 (234-311)||(42699769-42699846)
chr3 (253-310)||(49815433-49815490)
chr3 (158-286)||(26135878-26136006)
chr3 (168-216)||(37237013-37237061)
chr3 (135-215)||(45663250-45663330)
chr3 (253-304)||(46556160-46556211)
chr3 (236-310)||(25179905-25179979)
chr3 (252-286)||(28582684-28582718)
chr3 (156-190)||(31684365-31684399)
chr3 (161-215)||(44412445-44412499)
chr3 (74-147)||(44412536-44412610)
chr3 (248-285)||(10943785-10943822)
chr3 (82-150)||(17474209-17474278)
chr3 (279-312)||(34641202-34641235)
chr3 (186-263)||(36727285-36727362)
chr3 (158-215)||(46978508-46978565)
chr3 (79-150)||(34641162-34641234)
chr3 (244-308)||(54985706-54985770)
chr3 (83-150)||(55428551-55428619)
[»] chr5 (68 HSPs)
chr5 (79-286)||(13634711-13634920)
chr5 (79-287)||(26414893-26415103)
chr5 (75-312)||(10072656-10072895)
chr5 (130-310)||(36392162-36392341)
chr5 (124-277)||(37606941-37607094)
chr5 (79-284)||(7544136-7544343)
chr5 (77-286)||(16938477-16938688)
chr5 (76-281)||(4373606-4373813)
chr5 (79-275)||(28279522-28279721)
chr5 (124-277)||(37779151-37779303)
chr5 (124-286)||(37551454-37551614)
chr5 (124-286)||(37654284-37654444)
chr5 (124-269)||(9856926-9857072)
chr5 (79-270)||(20146917-20147114)
chr5 (168-307)||(29002220-29002359)
chr5 (125-289)||(16501822-16501988)
chr5 (156-285)||(17024260-17024389)
chr5 (79-286)||(10476026-10476237)
chr5 (140-282)||(8502874-8503017)
chr5 (83-290)||(2550383-2550592)
chr5 (120-276)||(9798657-9798814)
chr5 (193-311)||(22023483-22023603)
chr5 (159-287)||(20513479-20513611)
chr5 (84-286)||(36363037-36363241)
chr5 (77-224)||(11756876-11757024)
chr5 (81-242)||(42681450-42681618)
chr5 (82-284)||(14681473-14681674)
chr5 (79-214)||(40815297-40815433)
chr5 (168-276)||(43497-43607)
chr5 (81-286)||(34980812-34981019)
chr5 (118-276)||(10650469-10650613)
chr5 (205-286)||(14245123-14245204)
chr5 (219-286)||(1657955-1658022)
chr5 (186-286)||(32727812-32727912)
chr5 (240-311)||(39965995-39966066)
chr5 (185-307)||(13839742-13839864)
chr5 (158-286)||(33744228-33744356)
chr5 (79-150)||(14245088-14245160)
chr5 (135-190)||(22022907-22022963)
chr5 (254-312)||(9856889-9856947)
chr5 (107-179)||(11419303-11419377)
chr5 (213-270)||(4423347-4423404)
chr5 (252-312)||(20147050-20147115)
chr5 (169-270)||(27110120-27110220)
chr5 (234-286)||(10650464-10650516)
chr5 (76-149)||(10650587-10650661)
chr5 (211-281)||(11419232-11419302)
chr5 (79-203)||(15986742-15986868)
chr5 (158-212)||(33424911-33424965)
chr5 (158-311)||(40305670-40305828)
chr5 (81-311)||(8551427-8551660)
chr5 (79-286)||(10204576-10204785)
chr5 (79-274)||(11436939-11437136)
chr5 (216-276)||(17780279-17780340)
chr5 (167-215)||(1977622-1977670)
chr5 (234-286)||(14245203-14245255)
chr5 (234-286)||(26414928-26414980)
chr5 (167-286)||(10043342-10043461)
chr5 (168-215)||(18855698-18855745)
chr5 (248-311)||(19177267-19177330)
chr5 (119-183)||(43417-43483)
chr5 (81-150)||(1657985-1658055)
chr5 (77-150)||(14245218-14245292)
chr5 (135-212)||(39966061-39966139)
chr5 (234-287)||(5688447-5688500)
chr5 (191-276)||(6597835-6597920)
chr5 (279-311)||(10476240-10476272)
chr5 (80-147)||(13634886-13634954)
[»] chr6 (45 HSPs)
chr6 (75-312)||(21606853-21607092)
chr6 (77-312)||(31849108-31849345)
chr6 (77-274)||(4097559-4097759)
chr6 (124-287)||(33235997-33236160)
chr6 (118-286)||(1300659-1300829)
chr6 (82-286)||(30487341-30487546)
chr6 (80-286)||(9719066-9719273)
chr6 (138-270)||(5585353-5585486)
chr6 (79-311)||(14515473-14515715)
chr6 (79-275)||(1390319-1390517)
chr6 (82-276)||(19278079-19278278)
chr6 (124-286)||(9721173-9721335)
chr6 (184-312)||(2900017-2900144)
chr6 (82-309)||(33041473-33041694)
chr6 (183-286)||(10818322-10818425)
chr6 (118-307)||(2892619-2892807)
chr6 (140-276)||(34176397-34176534)
chr6 (79-285)||(16738032-16738239)
chr6 (82-312)||(30849923-30850153)
chr6 (136-246)||(13583777-13583888)
chr6 (135-269)||(10348850-10348986)
chr6 (167-285)||(665876-665995)
chr6 (135-275)||(1395692-1395834)
chr6 (75-199)||(2893626-2893752)
chr6 (118-274)||(2892890-2893050)
chr6 (77-217)||(12811085-12811226)
chr6 (217-286)||(9298625-9298695)
chr6 (147-232)||(25741476-25741562)
chr6 (222-308)||(7775959-7776046)
chr6 (119-192)||(6034201-6034275)
chr6 (252-311)||(1300629-1300688)
chr6 (169-216)||(32926737-32926784)
chr6 (156-282)||(25468438-25468564)
chr6 (79-150)||(9721138-9721210)
chr6 (161-232)||(25747418-25747489)
chr6 (135-216)||(14548711-14548793)
chr6 (82-150)||(9719034-9719103)
chr6 (158-215)||(26318386-26318443)
chr6 (168-241)||(29490475-29490548)
chr6 (248-308)||(33955499-33955559)
chr6 (80-145)||(16737997-16738063)
chr6 (167-216)||(17155446-17155495)
chr6 (279-312)||(23090994-23091027)
chr6 (249-281)||(2893018-2893050)
chr6 (79-150)||(3841258-3841330)
[»] chr1 (63 HSPs)
chr1 (77-286)||(30010330-30010541)
chr1 (79-284)||(40094970-40095178)
chr1 (75-278)||(32951361-32951566)
chr1 (79-286)||(41498404-41498613)
chr1 (76-283)||(35349502-35349709)
chr1 (118-307)||(10391912-10392108)
chr1 (86-286)||(2858967-2859169)
chr1 (118-276)||(8529839-8529998)
chr1 (82-286)||(38509929-38510135)
chr1 (79-286)||(12234010-12234219)
chr1 (124-275)||(51597714-51597866)
chr1 (129-269)||(50744332-50744474)
chr1 (122-303)||(44210925-44211105)
chr1 (156-278)||(36285617-36285739)
chr1 (156-285)||(7444574-7444703)
chr1 (83-280)||(49946629-49946828)
chr1 (124-267)||(45585739-45585883)
chr1 (161-285)||(41676363-41676489)
chr1 (129-280)||(6563628-6563779)
chr1 (129-282)||(26940882-26941036)
chr1 (182-286)||(20576168-20576270)
chr1 (77-309)||(33643266-33643499)
chr1 (206-311)||(28770852-28770965)
chr1 (156-242)||(42230617-42230703)
chr1 (204-280)||(43552037-43552109)
chr1 (77-311)||(49832545-49832778)
chr1 (76-286)||(1085524-1085737)
chr1 (79-215)||(35927814-35927951)
chr1 (253-311)||(8529809-8529867)
chr1 (158-312)||(47071132-47071286)
chr1 (158-285)||(25268345-25268472)
chr1 (77-147)||(40709290-40709361)
chr1 (124-311)||(2470730-2470933)
chr1 (254-308)||(2470912-2470966)
chr1 (77-150)||(40094931-40095005)
chr1 (158-274)||(52707726-52707842)
chr1 (77-155)||(7444476-7444555)
chr1 (246-312)||(1344717-1344783)
chr1 (161-215)||(51303490-51303544)
chr1 (252-285)||(10391908-10391941)
chr1 (189-286)||(35512909-35513006)
chr1 (123-202)||(43553049-43553130)
chr1 (174-217)||(232634-232677)
chr1 (161-212)||(525208-525259)
chr1 (252-311)||(26941018-26941077)
chr1 (79-150)||(35349466-35349536)
chr1 (76-150)||(38509891-38509966)
chr1 (252-307)||(50744456-50744511)
chr1 (168-215)||(51582072-51582119)
chr1 (252-286)||(35349637-35349671)
chr1 (158-212)||(50079493-50079547)
chr1 (254-311)||(1738118-1738175)
chr1 (234-307)||(2506553-2506626)
chr1 (279-312)||(20607429-20607462)
chr1 (162-215)||(27739136-27739189)
chr1 (76-150)||(41498576-41498652)
chr1 (162-215)||(42742416-42742469)
chr1 (76-147)||(2470727-2470799)
chr1 (169-286)||(20607311-20607426)
chr1 (75-146)||(28770897-28770969)
chr1 (249-309)||(40287430-40287490)
chr1 (249-285)||(41498440-41498476)
chr1 (276-312)||(51303383-51303419)
[»] chr7 (79 HSPs)
chr7 (75-281)||(33655148-33655356)
chr7 (125-312)||(17852918-17853105)
chr7 (124-285)||(34235043-34235206)
chr7 (124-286)||(40196567-40196730)
chr7 (118-286)||(41496992-41497161)
chr7 (79-285)||(1051536-1051742)
chr7 (77-286)||(25887190-25887402)
chr7 (77-309)||(34228330-34228565)
chr7 (129-287)||(24970199-24970358)
chr7 (77-284)||(43230234-43230442)
chr7 (76-286)||(47390852-47391065)
chr7 (79-286)||(13770983-13771190)
chr7 (167-286)||(4833566-4833685)
chr7 (184-286)||(18231693-18231795)
chr7 (124-246)||(37417708-37417831)
chr7 (81-309)||(40572247-40572475)
chr7 (158-264)||(22163167-22163272)
chr7 (158-264)||(22221875-22221980)
chr7 (85-311)||(41008188-41008422)
chr7 (129-285)||(42306385-42306538)
chr7 (79-211)||(39855975-39856109)
chr7 (163-312)||(10315719-10315878)
chr7 (161-311)||(23116269-23116420)
chr7 (163-309)||(32872788-32872939)
chr7 (161-311)||(48093977-48094127)
chr7 (143-276)||(45940701-45940835)
chr7 (80-220)||(31571569-31571713)
chr7 (124-270)||(42087041-42087188)
chr7 (75-225)||(26365763-26365916)
chr7 (168-277)||(13425164-13425273)
chr7 (135-286)||(33519105-33519257)
chr7 (81-215)||(18063667-18063800)
chr7 (256-312)||(37417812-37417868)
chr7 (81-286)||(37620776-37620983)
chr7 (124-225)||(48152030-48152127)
chr7 (255-311)||(10315623-10315679)
chr7 (248-312)||(48881730-48881794)
chr7 (252-311)||(17852881-17852940)
chr7 (119-233)||(23029428-23029537)
chr7 (128-242)||(38378095-38378205)
chr7 (158-312)||(48013583-48013738)
chr7 (169-239)||(20393693-20393763)
chr7 (162-308)||(21857432-21857577)
chr7 (169-281)||(30891034-30891147)
chr7 (76-307)||(39646466-39646699)
chr7 (118-176)||(10315653-10315712)
chr7 (173-216)||(18127347-18127390)
chr7 (169-272)||(28074152-28074255)
chr7 (216-263)||(31553240-31553287)
chr7 (77-150)||(40196530-40196604)
chr7 (183-265)||(47229888-47229970)
chr7 (248-309)||(12315523-12315584)
chr7 (248-309)||(18536301-18536362)
chr7 (185-282)||(30592292-30592389)
chr7 (79-150)||(28074103-28074175)
chr7 (161-212)||(3143564-3143615)
chr7 (76-150)||(13770945-13771020)
chr7 (168-215)||(19261945-19261992)
chr7 (253-311)||(19262014-19262073)
chr7 (79-199)||(37925841-37925963)
chr7 (252-286)||(39856040-39856074)
chr7 (77-150)||(41496955-41497029)
chr7 (252-286)||(41497132-41497166)
chr7 (168-311)||(48881558-48881711)
chr7 (129-305)||(18795611-18795788)
chr7 (279-312)||(28074102-28074135)
chr7 (253-305)||(1013940-1013992)
chr7 (76-151)||(16833869-16833945)
chr7 (79-146)||(18231762-18231830)
chr7 (206-274)||(19835838-19835906)
chr7 (105-149)||(24970192-24970236)
chr7 (234-286)||(33519083-33519135)
chr7 (279-311)||(33519260-33519292)
chr7 (252-307)||(34235183-34235243)
chr7 (279-311)||(36267553-36267585)
chr7 (234-286)||(37925876-37925928)
chr7 (252-312)||(40196707-40196766)
chr7 (279-311)||(41496957-41496989)
chr7 (252-284)||(43230273-43230305)
[»] scaffold0262 (1 HSPs)
scaffold0262 (118-287)||(16330-16500)
[»] scaffold0067 (2 HSPs)
scaffold0067 (79-283)||(39225-39434)
scaffold0067 (252-286)||(39365-39399)
[»] scaffold0096 (2 HSPs)
scaffold0096 (76-312)||(6581-6818)
scaffold0096 (253-286)||(6619-6652)
[»] scaffold0026 (1 HSPs)
scaffold0026 (82-286)||(1175-1381)
[»] scaffold0171 (1 HSPs)
scaffold0171 (124-276)||(15996-16149)
[»] scaffold0294 (1 HSPs)
scaffold0294 (135-273)||(15320-15458)
[»] scaffold0341 (1 HSPs)
scaffold0341 (129-280)||(18821-18972)
[»] scaffold0007 (1 HSPs)
scaffold0007 (167-286)||(242306-242425)
[»] scaffold0012 (1 HSPs)
scaffold0012 (234-311)||(184611-184688)
[»] scaffold0006 (1 HSPs)
scaffold0006 (168-216)||(81516-81564)
[»] scaffold0783 (1 HSPs)
scaffold0783 (168-216)||(6015-6063)
[»] scaffold0198 (1 HSPs)
scaffold0198 (234-286)||(3182-3234)
[»] scaffold0018 (1 HSPs)
scaffold0018 (158-263)||(69264-69370)
[»] scaffold0027 (1 HSPs)
scaffold0027 (236-285)||(122020-122069)


Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 16 - 308
Target Start/End: Complemental strand, 39733033 - 39732742
Alignment:
Q  16 gaaagaataacaaaagagagagaagccatcaaaagagccatagacacatattgtagatgttttagggtgtgtttggattgaaggtttgagaggggaagga 115  Q
    ||||||||||||||||||||| |  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39733033 gaaagaataacaaaagagagaaa--ccatcaagagagccatagacacatattgtagatgttttagggtgtgtttggattgaaggtttgagaggggaagga 39732936  T
Q  116 atgg-aggatttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgt 214  Q
    | || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39732935 aagggatgatttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgt 39732836  T
Q  215 taatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacac 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39732835 taatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatctaaacacac 39732742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 79 - 283
Target Start/End: Complemental strand, 15224938 - 15224732
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||  | |||||  |||||||||| | || | | |||||||||| |||||||||||||| ||||||| |||||||||||| |||||||    
T  15224938 agggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaat 15224839  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  15224838 taagtgtgattgaagtattatatgatcatttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 15224739  T
Q  277 cctcccc 283  Q
     ||||||    
T  15224738 actcccc 15224732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 77 - 272
Target Start/End: Complemental strand, 36347787 - 36347590
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaagg-aatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataa 174  Q
    |||||||||||||||||||| |||||  |||||||||| || ||||  |||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  36347787 ttagggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataa 36347688  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||| |||| || ||||| | | |||||| ||||||||||||||    
T  36347687 attaagtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagt 36347590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 118 - 286
Target Start/End: Original strand, 23748135 - 23748304
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||| ||||| |||||||| ||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  23748135 ggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattatattatcgtttatcatgtta 23748234  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||||||||| || |||||||||| ||| |||| |||||||||||||||| |||||||||||||    
T  23748235 atatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcc 23748304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 118 - 310
Target Start/End: Original strand, 39821709 - 39821902
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||||||||| ||||||||||| ||| | |||| |||||||||||||||||||||||||  |||| |||||||||| |||| ||||||||||||    
T  39821709 ggagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtattataagatcatttatcatgtta 39821808  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccc 310  Q
    ||||||||||| |||| | |  |||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  39821809 atatgttaactctttaaatattatttcatagtgtccgtaatttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaacacaccc 39821902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 82 - 280
Target Start/End: Complemental strand, 36567093 - 36566891
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttactttt-cgtttttaaattacggactatata-catgtttttctaaaataaatta 178  Q
    ||||||||||||||| |||||  ||||||||   | | || ||||||||||| ||||||||||||| | | |||||| |||||||||||| |||||||||    
T  36567093 gtgtgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaattatgaattatataacatgtttttctataataaatta 36566994  T
Q  179 agtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaaca-tttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
    | | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| |    
T  36566993 attgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaaagtaaatc 36566894  T
Q  278 ctc 280  Q
    |||    
T  36566893 ctc 36566891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 42316909 - 42316775
Alignment:
Q  176 ttaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa 275  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||| | |||||||||||||||||||||    
T  42316909 ttaagtgtgattgaagtattatatgatcgtttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaa 42316810  T
Q  276 ccctcccctcctaaaccttccatccaaacacaccct 311  Q
    | | ||||| ||||||||||||||||||||||||||    
T  42316809 ctc-ccccttctaaaccttccatccaaacacaccct 42316775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 135 - 309
Target Start/End: Original strand, 16565832 - 16566012
Alignment:
Q  135 tttttaaattacggactatata---catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttt 231  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  16565832 tttttaaattacgaactatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaacttttt 16565931  T
Q  232 ataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac-cctc--ccctcctaaaccttccatccaaacacacc 309  Q
    | ||||| ||||||| | | |||||||||||||| ||||||||||  |||   ||||||||||| || |||||||||||||    
T  16565932 aaaaaacgtttcatagtatccgtaatttaaaaataaaaagtaaacatctcattcctcctaaaccctcaatccaaacacacc 16566012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 81 - 285
Target Start/End: Complemental strand, 36046443 - 36046240
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaa 179  Q
    |||||||||||||||| |||||  |||||||||| | ||  | |||||||||  |||||||||||||||| ||||| |||| |||| ||||||||||| |    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggaggggaggtttacttttgttttttaaattacggacgatataacatgcttttataaaataaattga 36046344  T
Q  180 gtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccct 279  Q
    ||  |||||||||||||| ||||| |||| ||||||||||||||||||||||| |||||||||  || ||| ||||||||||||||||||| ||||| ||    
T  36046343 gt--gattgaagtattatgtgatcatttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactct 36046246  T
Q  280 cccctc 285  Q
    ||||||    
T  36046245 cccctc 36046240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 135 - 281
Target Start/End: Complemental strand, 19567008 - 19566860
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttt-a 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||||| |||||||| ||||||||| |    
T  19567008 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgaccgtttatcattttaatatgctaactttttaa 19566909  T
Q  233 taaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcc 281  Q
     ||||||||||||| |||  ||||||||||| ||| |||||||||||||    
T  19566908 aaaaacatttcatagtgtctgtaatttaaaactgagaagtaaaccctcc 19566860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 75 - 286
Target Start/End: Complemental strand, 31796012 - 31795804
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||| ||||||||||||||||||  |||||||||| | |||    ||| ||||| ||| ||||| ||||| || ||| ||||||||| |||||||    
T  31796012 ttttagggtttgtttggattgaaggtttaggaggggaagggaggga----ttaattttcttttctaaatcacggagtaaataacatgtttttttaaaata 31795917  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||| |||  |||| | ||||| ||||||| ||| ||||||||||||| ||||||||    
T  31795916 aattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagta 31795817  T
Q  274 aaccctcccctcc 286  Q
    |  ||||||||||    
T  31795816 agtcctcccctcc 31795804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 124 - 264
Target Start/End: Complemental strand, 28262641 - 28262500
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| |||||||||||  ||||||||| ||||||||||||||||||||||  | |||||||| ||||| ||||||||||||||||||| ||| |    
T  28262641 tttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattatat 28262542  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaa 264  Q
    |||||||||| |||| |||||||| ||||| |||||||||||    
T  28262541 taactttttaaaaaatatttcatagtgttcataatttaaaaa 28262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 135 - 286
Target Start/End: Original strand, 40022427 - 40022582
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgt--taatatgttaacttttt 231  Q
    ||||||||||| | |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||| |  ||||||||| |||||||    
T  40022427 tttttaaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 40022526  T
Q  232 -ataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
     | ||||||||||||| |||  ||||||||||||||||| ||||||||||||||||    
T  40022527 aaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcc 40022582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 282
Target Start/End: Complemental strand, 8427110 - 8426918
Alignment:
Q  84 gtgtttggattgaaggtttgagaggggaaggaatggagga-tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagt 181  Q
    ||||||||||||| |||||  ||||| |||| | ||  || |||||||||| |||||||| ||| ||| ||||| |||||||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaagt 8427011  T
Q  182 atgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcc 281  Q
      |||||||||||||||||||| |||||||||        ||||||||||| ||||||||||||| ||| | |||||||||||| |||||||||||||||    
T  8427010 gcgattgaagtattatatgatcatttatcatg--------ttaactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctcc 8426919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 173 - 274
Target Start/End: Original strand, 34209560 - 34209661
Alignment:
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||||||||||    
T  34209560 aaattaagtgtgattgaagtgttatatgattgtttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaagt 34209659  T
Q  273 aa 274  Q
    ||    
T  34209660 aa 34209661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 77 - 312
Target Start/End: Original strand, 9631556 - 9631805
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaa--ggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttcta---aa 170  Q
    |||||||| ||||||||||||||||| ||| | |||  ||||  |||| |||||||||| |||||||| ||  ||||||||| ||||||||| |    ||    
T  9631556 ttagggtgcgtttggattgaaggttt-agaagagaaagggaaaagagg-tttacttttcttttttaaactatcgactatataacatgtttttttttttaa 9631653  T
Q  171 ataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaa 270  Q
    |||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||  ||| ||||||||||||| |||||    
T  9631654 ataaatcaagtgtgaatgaagtattatattatcgtttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaaaa 9631753  T
Q  271 gtaaaccctc----------ccctcctaaaccttccatccaaacacaccctt 312  Q
    || |||||||          |||||||||||| |||||||||||||||||||    
T  9631754 gttaaccctcttctccctttccctcctaaaccctccatccaaacacaccctt 9631805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 12541813 - 12541931
Alignment:
Q  126 tacttttcgtttttaaattacggactatataca--tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt 223  Q
    |||||||| |||||||||||||||||||||| |    |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||    
T  12541813 tacttttcttttttaaattacggactatataaaatattttttctaaaataaattaagtgcgattgaagtactatatgatcgtttatcatgttaatgtgtt 12541912  T
Q  224 aactttttataaaacattt 242  Q
    ||||||||| |||||||||    
T  12541913 aactttttaaaaaacattt 12541931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 37740085 - 37739949
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgttttt-ctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaac 226  Q
    ||||| |||||||||| | || |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  37740085 ttttcttttttaaattccagattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaac 37739986  T
Q  227 tttttataaaacatttcataatgttcgtaatttaaaaat 265  Q
    |||||  |||||  |||||| |||||||||||| |||||    
T  37739985 tttttgaaaaac--ttcatagtgttcgtaattttaaaat 37739949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 17379897 - 17379994
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattt 259  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||| ||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 222 - 311
Target Start/End: Original strand, 1583222 - 1583311
Alignment:
Q  222 ttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  1583222 ttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcctaaaccctccatccaaacaaaccct 1583311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 81 - 279
Target Start/End: Original strand, 9426987 - 9427188
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaatta 178  Q
    ||||||||||||||||| ||||  |||||||||| | | |||| |||  ||||| ||||||||||||  |||||||| |||||||||| ||| |||||||    
T  9426987 ggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattaccaactatataacatgtttttcaaaactaaatta 9427086  T
Q  179 agtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttt-ttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
     |  |||||||||||||||||| | |||||||||| ||||||| |||||||   | ||||||||| ||| ||| |||||||||||||||||||  |||||    
T  9427087 tgcgtgattgaagtattatatgtttgtttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaatcaaacc 9427186  T
Q  278 ct 279  Q
    ||    
T  9427187 ct 9427188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 2241471 - 2241563
Alignment:
Q  139 taaattacggactatatac-atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttt 230  Q
    ||||||||||||||||||  | |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||| ||||    
T  2241471 taaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattatatgattgtttatcatgttaatatgttaaatttt 2241563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 285
Target Start/End: Original strand, 12751899 - 12752023
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattta 260  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||| || ||| ||| |||| |||| | |||| |||||||| ||| | ||||||     
T  12751899 tttttctaaaataatttaagtgtgattgaagtattatatgatcgtttattatattattatattaatttttaaaaaaatatttcatagtgtccataatttt 12751998  T
Q  261 aaaatgaaaagtaaaccctcccctc 285  Q
    |||| |||||| |||||||||||||    
T  12751999 aaaacgaaaagcaaaccctcccctc 12752023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 35736172 - 35736302
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||||||||||||||| |||||  |||||||||| | || |||  ||| ||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaata 35736271  T
Q  174 aattaagtatgattgaagtattatatgatcg 204  Q
    ||| |||| ||| ||||||||||||||||||    
T  35736272 aatgaagtgtgactgaagtattatatgatcg 35736302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 283
Target Start/End: Original strand, 7681299 - 7681450
Alignment:
Q  129 ttttcgtttttaaattacggactatatacatgtttttc-taaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| ||||| ||||||||| ||||||   ||||||  ||||||||||||||| ||||||||||||||||||||||||| |     ||  |||||||||    
T  7681299 ttttcattttttaattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattatatgatcgtttgt----atatcatgttaact 7681394  T
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccc 283  Q
    ||| | |||| |||||||||| | || ||||||||||| |||||||||||||||||    
T  7681395 tttaaaaaaatatttcataatatccgcaatttaaaaataaaaagtaaaccctcccc 7681450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 124 - 264
Target Start/End: Complemental strand, 39354372 - 39354231
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||  ||||||||||||    |||||| ||||||| ||||||||||| | ||| |||||||||||||| ||||||| |||| |||||| ||| |    
T  39354372 tttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtattacatgatcgattattatgttattattt 39354273  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaa 264  Q
    ||| |||||  |||| |||||||||||| |||||||||||||    
T  39354272 taatttttttaaaaatatttcataatgtgcgtaatttaaaaa 39354231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 32503238 - 32503324
Alignment:
Q  156 acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacattt 242  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||  |||||||| || |||| ||||||||||| |||||||||    
T  32503238 acatatttttctaaaataaattaagtatgattaaaatattatatgattatttatcatctttatatattaactttttacaaaacattt 32503324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 6721822 - 6721717
Alignment:
Q  122 gatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatat 220  Q
    |||||| ||||| ||||||||  ||||| |||||| |||||||||||||||||||| |||| |||||||| |||||||| ||| ||||||||||||| ||    
T  6721822 gatttagttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattgaaatattatattatcatttatcatgttaagat 6721723  T
Q  221 gttaac 226  Q
     |||||    
T  6721722 attaac 6721717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 27926668 - 27926752
Alignment:
Q  192 tattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    |||||||||||||||||||||||||||||||||||||||||   || |||| ||| | | ||||||||||||||||||| |||||    
T  27926668 tattatatgatcgtttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaaataaac 27926752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 29525931 - 29525823
Alignment:
Q  124 tttacttttcgtttttaaattacggactatatac-atgtttttctaaaataaattaagtatgattgaagtattatatgat--cgtttatcatgttaatat 220  Q
    |||| ||||| ||||||||| ||||| ||||||  |||||||| ||||||||||||| | ||||||||||||||||| ||    ||||||||||||||||    
T  29525931 tttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattatataatactttttatcatgttaatat 29525832  T
Q  221 gttaacttt 229  Q
    |||||||||    
T  29525831 gttaacttt 29525823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 286
Target Start/End: Original strand, 45257307 - 45257516
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaat 176  Q
    ||||||||||||||||||  ||||  |||||||| |||| |||||| | ||||||  ||| ||||||||| || || || | ||||||  ||||||||||    
T  45257307 agggtgtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaacaatgtaaaatgttttcttaaaataaat 45257406  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| |  |||||||||||||||||| |||||||| ||  ||  | || |||  | ||| ||||| ||||| | ||||||||||||| |||||||||||    
T  45257407 taagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatatccgtaatttaaaaaagaaaagtaaac 45257506  T
Q  277 cctcccctcc 286  Q
    | || |||||    
T  45257507 catctcctcc 45257516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 276
Target Start/End: Original strand, 35325353 - 35325468
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattta 260  Q
    ||||| |||||||||||||||||  |||||||||||||||||| |||||||||||| ||  | || |||||| |||  |||| |||||||   |||||||    
T  35325353 tttttttaaaataaattaagtatttttgaagtattatatgatcatttatcatgttattaattcaattttttaaaaattattttataatgtcgttaattta 35325452  T
Q  261 aaaatgaaaagtaaac 276  Q
    |||| |||||| ||||    
T  35325453 aaaaggaaaagcaaac 35325468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 79 - 210
Target Start/End: Original strand, 41778773 - 41778906
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa--ggaatggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaa 175  Q
    |||||||||||||||||| ||||| ||| |||||  |||  ||||| |||||||||    ||||||||| ||||  |||| | ||||||| |||||||||    
T  41778773 agggtgtgtttggattgagggttt-agaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaa 41778871  T
Q  176 ttaagtatgattgaagtattatatgatcgtttatc 210  Q
    |||||| ||||||||||||||||||||| ||||||    
T  41778872 ttaagtgtgattgaagtattatatgatcatttatc 41778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 41841673 - 41841816
Alignment:
Q  70 agatgttttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttct 167  Q
    |||| ||||| |||||||||||||||| | |||  ||||| |||| |||| ||| |||  ||||| ||||||||||||  |||||||| ||| |||| ||    
T  41841673 agattttttaaggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattaccaactatataacatattttcct 41841772  T
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatca 211  Q
    |||||||||||||  |||||| |||||||||||||  |||||||    
T  41841773 aaaataaattaagggtgattggagtattatatgattttttatca 41841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 886919 - 887051
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaagg-aatggaggatttacttttcgtttttaaattacggactatatacatgtttttctaaaataaatt 177  Q
    |||||||||| || |||| |||||  |||||||||| || |||||  ||||||||| ||||||||||||  | |||| | ||| |||| |||||||||||    
T  886919 agggtgtgttggg-ttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattacacaatataaa-atgcttttttaaaataaatt 887016  T
Q  178 aagtatgattgaagtattatatgatcgtttatcat 212  Q
    | || ||||||||||||||||||||| ||||||||    
T  887017 atgtgtgattgaagtattatatgatcatttatcat 887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 215
Target Start/End: Original strand, 31061359 - 31061497
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaat 176  Q
    ||||||||||||||||||||||||  |||||||| | |||| |||  | ||||||  ||||||||||||| || || || | ||| ||| ||||||||||    
T  31061359 agggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataaat 31061458  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||| |  ||||| |||||||||||| |||||||||||    
T  31061459 taagtgtttttgaaatattatatgatcatttatcatgtt 31061497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 14196820 - 14196897
Alignment:
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaaca 305  Q
    ||||| ||||||||| ||| ||||||||||||||||| ||||||||| |||||||||||  |||| || |||||||||    
T  14196820 ttttaaaaaacattttatagtgttcgtaatttaaaaaagaaaagtaagccctcccctccagaaccctcaatccaaaca 14196897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 23748164 - 23748105
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||| |||||||| ||||| ||||||||||||||||||||| || |||||||||||||||    
T  23748164 cgtagtttaaaaaagaaaactaaaccctcccctcctaaaccctcgatccaaacacaccct 23748105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 18811413 - 18811467
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    |||| ||||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  18811413 ttttttaaaataaattaagtgtgattgaaatattatatgattgtttatcatgtta 18811467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 14187161 - 14187092
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaa 303  Q
    ||||||||| ||||||||  ||||||||||| ||||||||| ||||||||| | |||||||| |||||||    
T  14187161 aaaacattttataatgtttataatttaaaaaagaaaagtaagccctccccttcaaaaccttcaatccaaa 14187092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 887222 - 887319
Alignment:
Q  183 tgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    |||||||||||||||||||||||||||||||||    | |||| |||||| ||||||||| |||   | ||||||||||||| ||||||||| | |||||    
T  887222 tgattgaagtattatatgatcgtttatcatgtt----ttttaa-ttttta-aaaacattttatagcatccgtaatttaaaaaagaaaagtaagcgctccc 887315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 9592032 - 9591975
Alignment:
Q  125 ttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagt 181  Q
    ||||||||  ||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  9592032 ttactttttttttttaaattacgcactatataacatgtttttctaaaatatattaagt 9591975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 24079047 - 24078986
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacacc 309  Q
    |||| |||||||||||| ||||||||| |||||| ||| |||| |||||||| |||||||||    
T  24079047 tgtttgtaatttaaaaaggaaaagtaagccctcctctcataaatcttccatctaaacacacc 24078986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 309
Target Start/End: Original strand, 44482202 - 44482263
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacacc 309  Q
    |||| |||||||||||| ||||||||| |||||| ||| |||| |||||||| |||||||||    
T  44482202 tgtttgtaatttaaaaaggaaaagtaagccctcctctcataaatcttccatctaaacacacc 44482263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 45098250 - 45098307
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||| ||| ||||||||||||||| |  |||||||||||||||||| |||||||||||    
T  45098250 atgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 45098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 286
Target Start/End: Complemental strand, 39821736 - 39821704
Alignment:
Q  254 taatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||||||||||||||||||||||||||    
T  39821736 taatttaaaaatgaaaagtaaaccctcccctcc 39821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 31928196 - 31928149
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||||||||||| |  |||||||||||||||||| ||||||||||||    
T  31928196 aaataaattaagtgtttttgaagtattatatgatcatttatcatgtta 31928149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 215
Target Start/End: Complemental strand, 42296552 - 42296409
Alignment:
Q  74 gttttagggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaa 171  Q
    ||||||||||||||||||||||| || ||  |||||||||| | | |||| || ||||||  ||||||||||||| || || | | || ||||| |||||    
T  42296552 gttttagggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaa 42296453  T
Q  172 taaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    | |||||||| |  || || |||||||||||| ||||| |||||    
T  42296452 tgaattaagtgtttttaaattattatatgatcatttattatgtt 42296409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 3094516 - 3094410
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    ||||||||||||||||||||  || |  |||||||||||||||||  |||||||||||  ||  | || ||| ||  || ||||| |||| |||||||||    
T  3094516 atgtttttctaaaataaatttcgtgtttttgaagtattatatgattatttatcatgttgttaattcaattttctaagaatcattttataacgttcgtaat 3094417  T
Q  258 ttaaaaa 264  Q
    |||||||    
T  3094416 ttaaaaa 3094410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 33265691 - 33265741
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcat 212  Q
    |||| ||||||||||||||| |  |||||||||||||||||| ||||||||    
T  33265691 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcat 33265741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 36566876 - 36566922
Alignment:
Q  105 gaggggaaggaatg-gaggatttacttttcgtttttaaattacggac 150  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  36566876 gaggggaagggatgagaggatttacttttcatttttaaattacggac 36566922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 8554499 - 8554462
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaa 112  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  8554499 ttttagggtgtgtttggattgaaagtttaagaggggaa 8554462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 20545799 - 20545848
Alignment:
Q  167 taaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||||||||||| | ||||||||||||||||||||  ||| ||||||||    
T  20545799 taaaataaattaaatgtgattgaagtattatatgattatttctcatgtta 20545848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 21662368 - 21662327
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatc 203  Q
    |||| |||||| |||||||| |||||||||||||||||||||    
T  21662368 ttttttaaaatcaattaagtttgattgaagtattatatgatc 21662327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 23748307 - 23748340
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||| |||||||||||||||||||    
T  23748307 tcccctcctaaaccctccatccaaacacaccctt 23748340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 31061391 - 31061358
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||||||||| ||||||||||||||||    
T  31061391 tcccctcctaaaccttcaatccaaacacaccctt 31061358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 31795772 - 31795841
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggac 150  Q
    |||||||||||| || |||||  |||| ||||| | || |||| ||||||||||||||||||||||||||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggac 31795841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 264
Target Start/End: Complemental strand, 15085853 - 15085757
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaa 264  Q
    |||||||||||||| |  |||||||||||||||||| ||||||| |||  ||  | || ||| || ||| ||||| ||||||| |||||||| ||||    
T  15085853 aaaataaattaagtgtttttgaagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattttaaaa 15085757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 22356052 - 22355976
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccc 310  Q
    ||||||||| | | |||||||||||||||||  |||| | || | ||||||| |||||| || ||||||||||||||    
T  22356052 aaaacattttacattgttcgtaatttaaaaaataaaaatgaatcatcccctcttaaaccctcaatccaaacacaccc 22355976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 22356252 - 22356176
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    |||||||||||||||||||||| | |||  |||||||| |||  ||||| || | ||||| ||||||||||||||||    
T  22356252 ttttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggac 22356176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 42813732 - 42813828
Alignment:
Q  189 aagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    ||||||||||||||  ||||||| |||  ||  | || ||| || ||| ||||| ||||||||||||||||||||| ||||| ||| || |||||||    
T  42813732 aagtattatatgattatttatcaggttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaaataagccatcccctc 42813828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 1e-81; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 79 - 307
Target Start/End: Complemental strand, 1027092 - 1026863
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgga-ggatttacttttcgtttttaaattacggactatatacatgtttttctaaaataaatt 177  Q
    |||||||||||||||| | |||||  || ||||||| | ||| || || ||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  1027092 agggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggactatataaatgtttttctaaaataaatt 1026993  T
Q  178 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| || |||||||||||||||||||||||    
T  1026992 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaacc 1026893  T
Q  278 ctcccctcctaaaccttccatccaaacaca 307  Q
    ||||||||||||||| ||||||||||||||    
T  1026892 ctcccctcctaaaccctccatccaaacaca 1026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 75 - 312
Target Start/End: Complemental strand, 7503202 - 7502963
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaat 172  Q
    |||||||||||||||||||||| | |||| ||||||| || | || ||| |||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  7503202 ttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaat 7503103  T
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| ||||     
T  7503102 aaattaagtgtgattaaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaatggaaagc 7503003  T
Q  273 aaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||| ||||| || ||||||||||||||||    
T  7503002 aaaccctcccctcccaaaccctcaatccaaacacaccctt 7502963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 76 - 286
Target Start/End: Complemental strand, 31543319 - 31543107
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    |||||||||||||| |||||| |||||  |||||||||| | || ||| |||||||||| ||||||||||| |||| ||||| |||||||||||||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaata 31543220  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||||||||||| | | ||||||||||||||||||||||    
T  31543219 aattaagtgtgattgaagtattatatgaccgtttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagta 31543120  T
Q  274 aaccctcccctcc 286  Q
    |||||||||||||    
T  31543119 aaccctcccctcc 31543107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 73 - 312
Target Start/End: Complemental strand, 9718729 - 9718488
Alignment:
Q  73 tgttttagggtgtgtttggattgaaggtttgagaggggaaggaatggagga-tttacttttcgtttttaaattacggactatata-catgtttttctaaa 170  Q
    ||||| |||||||||||||||||| |||||  |||| ||||| | ||   | |||||||||| ||||||||||| | |||||||| ||| ||||||||||    
T  9718729 tgtttcagggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaa 9718630  T
Q  171 ataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaa 270  Q
    ||  ||||| | |||||||||||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||| ||| |||||||||||||||||||    
T  9718629 attcattaattgtgattgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaa 9718530  T
Q  271 gtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
       ||||||||||||||||||| |||||||||||||||||||    
T  9718529 tcgaaccctcccctcctaaaccctccatccaaacacaccctt 9718488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 118 - 286
Target Start/End: Original strand, 16652989 - 16653158
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||  |||||    
T  16652989 ggagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatatgatcgtttattttgtta 16653088  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  16653089 atatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctcc 16653158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 85 - 286
Target Start/End: Original strand, 1281149 - 1281352
Alignment:
Q  85 tgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagta 182  Q
    |||||||||||| |||||  |||||||||| ||| |||| |||||||||| |||||||||||||||| ||||| ||||||||||||| |||||| ||||     
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtg 1281248  T
Q  183 tgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    || |||||||||||||| ||||||||| |||||||||||||||||||||| |||| |||||||| ||| ||||||||||||||||||| |||| ||||||    
T  1281249 tggttgaagtattatattatcgtttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaatcctccc 1281348  T
Q  283 ctcc 286  Q
    ||||    
T  1281349 ctcc 1281352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 118 - 282
Target Start/End: Complemental strand, 11575610 - 11575445
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||||||||| ||||||||||||  | |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  11575610 ggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgatcgtttatcatgtta 11575511  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    |||||||||||||||| ||||||||||||| | | | |||||||| ||||||||||||||||||||    
T  11575510 atatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaaccctccc 11575445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 11033416 - 11033616
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataa 174  Q
    ||||||||||||||||||||| |||||   || |||||| | || || |||||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  11033416 tttagggtgtgtttggattgagggtttagaagaggaagggagggggg-tttacttttcttttttaaataacggactatatatcatgtttttctaaaataa 11033514  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttt-ataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||| || ||||||||  ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||| |||||||||| |||||||||    
T  11033515 attatgtgtgattgaataattatatgatcgtttatcatgttaatatgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaagta 11033614  T
Q  274 aa 275  Q
    ||    
T  11033615 aa 11033616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 129 - 307
Target Start/End: Complemental strand, 29358532 - 29358354
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| |||||||| |||||| |||||| ||| |||||||| |||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| |    
T  29358532 ttttcatttttaaactacggattatataacatatttttctagaataaattaagtgtgattgaagtattataggatcgtttataatgttaatatgttaa-t 29358434  T
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacaca 307  Q
    ||||| |||| |||| ||| ||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||    
T  29358433 ttttaaaaaatattttatagtgtccgtaatttaaaaataaaaagtaaaccttctcctcctaaaccctccatccaaacaca 29358354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 75 - 249
Target Start/End: Complemental strand, 42650579 - 42650405
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    |||| |||||||||| |||||| |||||| ||| ||||||    |||  |||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  42650579 tttttgggtgtgtttagattgagggtttgggagaggaagg----gagagtttacttttcgtttttaaattacggaatatataacatgtttttctaaaata 42650484  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgt-ta--atatgttaactttttataaaacatttcataatg 249  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  42650483 aattaagtgtgattgaagtattatatgattgtttatcatgtataacatatgttaactttttataaaacatttcataatg 42650405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 79 - 270
Target Start/End: Original strand, 6315066 - 6315255
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatggagg-atttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||| ||||| | ||||| |||||| ||   ||||| ||||||||||||||| |||||||||||||||||||||    
T  6315066 agggtgtgtttggattgagggtttaggaggcgaagg-agggaggaatttacatt---ttttttaattacggactatataacatgtttttctaaaataaat 6315161  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaa 270  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||||| |||||  ||||||||||||| ||| |||| ||||||||||||||    
T  6315162 taagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaatttttttaaaaacatttcatagtgtccgtattttaaaaatgaaaa 6315255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 124 - 282
Target Start/End: Original strand, 11785572 - 11785731
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| ||||||||||| | |||||||| ||||||||||||||||| ||||| |  ||||||||||||||||| | ||||||||||||||||||     
T  11785572 tttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgtttatcatgttaatatgc 11785671  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||||  ||||||||||    
T  11785672 taactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctccc 11785731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 81 - 286
Target Start/End: Complemental strand, 30479959 - 30479752
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaatta 178  Q
    |||||||||||||||| |||||  ||| |||| |||  ||||| |||| ||||| |||||||| ||| ||||||||  |||||||||||||||||||| |    
T  30479959 ggtgtgtttggattgagggtttatgagaggaatggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataaatca 30479860  T
Q  179 agtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccc 278  Q
    ||| ||||||||||||||||| ||| |||||||  ||||||||||||||||||| || |||||||||| |||  |||||||||||||||||||| ||| |    
T  30479859 agtgtgattgaagtattatattatcatttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaagtgaactc 30479760  T
Q  279 tcccctcc 286  Q
    ||||||||    
T  30479759 tcccctcc 30479752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 37923265 - 37923123
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttat 233  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||  |||| || |||||||||||| |||||||||||||||| |||||| ||||     
T  37923265 tttttaaattacagactatataacatgtttttctaaaataaattaagtgcgattaaaatattatatgatcatttatcatgttaatattttaactctttaa 37923166  T
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  37923165 aaaacatttcatagtgttcataatttaaaaatgaaaagtaaac 37923123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 79 - 275
Target Start/End: Original strand, 13404976 - 13405178
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||| ||||||||| |||||  |||||||||| |||| || | ||||||||| ||||||||| || ||||||||| ||||||||||||||||||||    
T  13404976 agggtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaataacagactatataacatgtttttctaaaataaat 13405075  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgtta----actttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||  ||| |||||| |||||||||||||||||||||||||||| ||||    |||||| | |||| ||||  |||||| |||||||||||||||||||||    
T  13405076 tatatataattgaattattatatgatcgtttatcatgttaatacgttaattcacttttaaaaaaatattttttaatgtccgtaatttaaaaatgaaaagt 13405175  T
Q  273 aaa 275  Q
    |||    
T  13405176 aaa 13405178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 276
Target Start/End: Original strand, 7979137 - 7979339
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaat-ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    |||||| |||||||||||||| |||||   || |||||| |  ||||  |||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  7979137 tttaggatgtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaata 7979236  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    ||| ||||   ||||||||||||||||||  ||||||||||||||| |||||  |||||  ||||||||||   ||| ||||||||||||||||||||||    
T  7979237 aatcaagtgcaattgaagtattatatgattatttatcatgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaagta 7979336  T
Q  274 aac 276  Q
    |||    
T  7979337 aac 7979339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 122 - 310
Target Start/End: Original strand, 30664405 - 30664597
Alignment:
Q  122 gatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatat 220  Q
    |||||| ||||| |||||||||| | |||| |||| |||||||||| |||||||||||||| ||||||||||||||||| | |||||||||| |||||||    
T  30664405 gatttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatat 30664504  T
Q  221 gttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc---taaaccttccatccaaacacaccc 310  Q
    |||||||||||| |||| ||||  |||||| |||||||||||| |||||| |||||  |||||| |   ||||||||||||| |||| |||||    
T  30664505 gttaactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaataaacattccccttctaataaaccttccatctaaacgcaccc 30664597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 135 - 284
Target Start/End: Original strand, 31738480 - 31738630
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttat 233  Q
    |||||||||||| ||||||||| ||||||| |||| |||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| || |     
T  31738480 tttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaa 31738579  T
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccct 284  Q
    |||| |||| ||| ||| ||||||||||||||||||  |||||||||||||    
T  31738580 aaaatattttatagtgtccgtaatttaaaaatgaaatttaaaccctcccct 31738630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 286
Target Start/End: Original strand, 2248450 - 2248661
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatggaggattt-acttttcgtttttaaattacggactatata-catgtttttctaaaataa 174  Q
    ||||||||||||||||||||  ||||  |||||||||| | ||  || || | ||| | ||||||||||||||  |||||| ||||||||||||||||||    
T  2248450 ttagggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacggtttatataacatgtttttctaaaataa 2248549  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    || |||| |||||| | |||||||||| ||||||  ||||||||| |||||||||| | |||| |||||||| ||| |||||||||||||| |||||| |    
T  2248550 atcaagtgtgattggaatattatatgaccgtttacgatgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagtga 2248649  T
Q  275 accctcccctcc 286  Q
    ||||||||||||    
T  2248650 accctcccctcc 2248661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 129 - 287
Target Start/End: Complemental strand, 40990377 - 40990215
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| |||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  40990377 ttttcttttttaaattacggactatataacatgtttctttaaaataaattaagtctgattgaagtattatatgatcgcttatcatgttaatatgttaact 40990278  T
Q  228 tttt--ataaaacatttcataatgt-tcgtaatttaaaaatgaaaagtaaaccctcccctcct 287  Q
     |||  | ||||||||||||| ||| |   |||| ||||||||||  ||||||||||||||||    
T  40990277 ctttaaaaaaaacatttcatagtgtctataaattaaaaaatgaaatataaaccctcccctcct 40990215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 36308927 - 36309052
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattta 260  Q
    ||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||| | || | |||||| ||||| |||||||||    
T  36308927 tttttataaaataaactaagtgtgattgaagtattatatgattgtttatcatgttaatatgtttacttttaaaaatatatttcacaatgtacgtaattta 36309026  T
Q  261 aaaatgaaaagtaaaccctcccctcc 286  Q
    || |||||||||||||||||||||||    
T  36309027 aagatgaaaagtaaaccctcccctcc 36309052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 277
Target Start/End: Complemental strand, 4247764 - 4247562
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatg-----gaggatttacttttcgttttt-aaattacggactatatacatgtttttctaaaat 172  Q
    ||||||||||||||||||||||||  |||||||||| | |     |||| |||||||||| ||||| |||||| | | ||| || |||||||| ||||||    
T  4247764 agggtgtgtttggattgaaggtttaggaggggaagggaggtagaggagggtttacttttctttttttaaattatgaattat-tatatgtttttttaaaat 4247666  T
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| |||| |||| | | ||  |||||||||||||| ||||||    
T  4247665 aaattaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaaatattttaaagtg-ccgtaatttaaaaataaaaagt 4247567  T
Q  273 aaacc 277  Q
    |||||    
T  4247566 aaacc 4247562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 259
Target Start/End: Original strand, 37032425 - 37032561
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||| ||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||| ||||||||| |||||||||    
T  37032425 tttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattatatgatagtttatcatcttaatatgt 37032524  T
Q  223 taactttttataaaacatttcataatgttcgtaattt 259  Q
    |||||||||| |||||| ||| || ||| ||||||||    
T  37032525 taactttttaaaaaacacttcctagtgtccgtaattt 37032561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 76 - 281
Target Start/End: Original strand, 28083739 - 28083946
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    |||| |||||||| ||||||| |||||  |||||||||| | | |||  |||  ||||| |||||||||||| ||| ||||| ||||||| |||||||||    
T  28083739 tttaaggtgtgttcggattgagggtttaggaggggaagggaggagagattttgtttttcttttttaaattacagacaatataacatgtttctctaaaata 28083838  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||||||| |||||| ||||||||||||| |||||||||||| | ||||||||| |||| ||||||| ||||| | | ||||||||||||| ||||  ||    
T  28083839 aattaagtgtgattggagtattatatgattgtttatcatgttgacatgttaactctttaaaaaacatatcatagtatccgtaatttaaaaaagaaatcta 28083938  T
Q  274 aaccctcc 281  Q
    ||||||||    
T  28083939 aaccctcc 28083946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 119 - 285
Target Start/End: Complemental strand, 41103709 - 41103540
Alignment:
Q  119 gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaa 217  Q
    |||| |||||||||| ||||||||||||   ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  41103709 gagggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttat 41103610  T
Q  218 tatgttaactttttataaaacatttcataatgttcgtaa--tttaaaaatgaaaagtaaaccctcccctc 285  Q
    | | |||| |||||  ||||| ||||||| ||| | |||  |||||||| |||||  |||||||||||||    
T  41103609 tgttttaatttttttaaaaacgtttcatagtgtccataatttttaaaaacgaaaatcaaaccctcccctc 41103540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 79 - 286
Target Start/End: Complemental strand, 12022387 - 12022178
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||||||| |||  |||||  | ||||||  |||||||||||||||| || || | ||||||| ||||||||||    
T  12022387 agggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaataaat 12022288  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| |  |||||||||||||||||| |||||||||||  ||  | || ||| || ||| ||||| ||||||||||||||||||||| ||||||||| |    
T  12022287 taagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaagc 12022188  T
Q  277 cctcccctcc 286  Q
    ||||||||||    
T  12022187 cctcccctcc 12022178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 33922523 - 33922680
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaa 175  Q
    ||||||| |||||||||||| |||||  || |||||||    |||  |||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||    
T  33922523 ttagggtatgtttggattgagggtttaggaagggaagg----gagagtttacttttcttttttaaattccggactatataacatatttttttaaaataaa 33922618  T
Q  176 ttaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaa 237  Q
    || |||||||||||||||| ||||||| |||||||||| |||||||||||||||||| ||||    
T  33922619 tttagtatgattgaagtatgatatgattgtttatcatgataatatgttaactttttaaaaaa 33922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 311
Target Start/End: Complemental strand, 3727053 - 3726863
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||        |    
T  3727053 tttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattgaaatattatatgaccgtttatcatg--------t 3726962  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa----------ccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||| |||| |||||||| |||  ||| ||||||||||||||||||| ||||          || |||||||||||||| ||||||||||||||||||    
T  3726961 taactatttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacaccct 3726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 285
Target Start/End: Original strand, 10028156 - 10028331
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgttt------------atc 210  Q
    |||||||||| |||||||||||||||| ||||| ||| ||||| ||||||||||||||| || ||||||| ||||||||||||||            | |    
T  10028156 tttacttttcttttttaaattacggaccatataacatatttttttaaaataaattaagtgtggttgaagtcttatatgatcgtttaccatattacggacc 10028255  T
Q  211 atgttaatatgttaactttt-tataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    || |||||||||||||||||  | |||| |||||||| ||| |||||||||||| | |||||||||||||||||||    
T  10028256 atattaatatgttaacttttaaaaaaaatatttcatagtgtccgtaatttaaaagtaaaaagtaaaccctcccctc 10028331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 9933332 - 9933475
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatga 267  Q
    ||||||||||||||||  ||||| |||||||||||| |||||||||||  ||  | || |||||  ||| ||||| ||||||| |  | |||||||| ||    
T  9933332 aaaataaattaagtatttttgaaatattatatgatcatttatcatgttgttaattcaatttttttaaaatcattttataatgtccaaattttaaaaaaga 9933431  T
Q  268 aaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||||||||||||   |||||||||||| |||||    
T  9933432 aaagtaaaccctcccctcctaaattctccatccaaacataccct 9933475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 274
Target Start/End: Complemental strand, 24243287 - 24243096
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaattaag 180  Q
    |||||||||||| || ||||| || ||| | |||  |||||  ||||||| | ||| |||||||| ||| |||| | || ||||| | |||| |||||||    
T  24243287 gtgtgtttggatcgagggtttaagggggaatggaggggagggcttactttccttttctaaattacagacaatatgagatctttttttcaaattaattaag 24243188  T
Q  181 tatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    | ||||||||||||||||||||| |||||||||||| ||| || | |||||| || |||||| ||| || ||||||||| ||||||||||||||    
T  24243187 tgtgattgaagtattatatgatcatttatcatgttattat-ttcaatttttaaaagacattttatagtg-tcgtaatttcaaaatgaaaagtaa 24243096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 276
Target Start/End: Complemental strand, 29691118 - 29690967
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttcta---aaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtta 224  Q
    ||||| || |||||||||||||||| || ||||||||| |    |||| | |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  29691118 ttttctttattaaattacggactatttaacatgtttttttttttaaatgacttaagtgtgattgaagtatcatatgatcgtttatcatgttaatatgtta 29691019  T
Q  225 actttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    |||||||  |||| ||||| || | |  |||  ||| |||||||||||||||    
T  29691018 acttttttaaaaatatttcctagtatcagtatgttataaatgaaaagtaaac 29690967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 286
Target Start/End: Original strand, 16024204 - 16024362
Alignment:
Q  129 ttttcgtttttaaattacggactatataca-tg-tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaac 226  Q
    |||| |||||||||||||| || ||||| | || ||||| | ||||||||||||| |  |||||||||||||||||| |||||||||||  ||  | ||     
T  16024204 tttttgtttttaaattacgaacaatataaaatgattttttttaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaat 16024303  T
Q  227 tttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||| || ||| ||||| ||||||| ||||||||||||| ||||||||||| |||||||||    
T  16024304 tttctaaaaatcattttataatgtccgtaatttaaaaa-gaaaagtaaactctcccctcc 16024362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 286
Target Start/End: Original strand, 43732778 - 43732896
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatga 267  Q
    |||||||||||||| |  |||||||||||||||||| |||||||| ||  ||  | || |||  | ||| ||||| ||||||| ||||||||||||| ||    
T  43732778 aaaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatgtccgtaatttaaaaaaga 43732877  T
Q  268 aaagtaaaccctcccctcc 286  Q
    |||||||||||||||||||    
T  43732878 aaagtaaaccctcccctcc 43732896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 75 - 286
Target Start/End: Original strand, 30365126 - 30365339
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaat 172  Q
    |||||||||||||||||||||| |||||  |||| ||| |||  ||||  || ||||||  ||||||||||||| || | ||| | | ||||| || |||    
T  30365126 ttttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaat 30365225  T
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||||||||| |  ||||||| |||||| ||| |||||||||||  ||  | || ||| || ||| |||||||||||||  |||||||||||| ||||||     
T  30365226 aaattaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaagg 30365325  T
Q  273 aaaccctcccctcc 286  Q
    || |||||||||||    
T  30365326 aagccctcccctcc 30365339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 35694915 - 35694830
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcat-gttaatatgttaactttttataaaacatttcata 246  Q
    ||||| |||||||||| |||| |||||||||||||||||||||| |||| ||  ||||||||||||||||||| |||| ||||||||    
T  35694915 tttttttaaaataaatcaagtgtgattgaagtattatatgatcg-ttattatatttaatatgttaactttttaaaaaatatttcata 35694830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 38198252 - 38198155
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||||| ||||||||| |||||||||||| |||  |||| | ||||||| |||||| |||||||| ||||||||||||||||||||| | |||||||||    
T  38198252 ggaggacttacttttcatttttaaattacagacactataaagtgttttt-taaaatgaattaagtgtgattgaagtattatatgatcatatatcatgtt 38198155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 34634260 - 34634346
Alignment:
Q  194 ttatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctc 280  Q
    |||||| || |||||  |||||||||||||||||||||| || | |||||||| ||| |||||||||||||| |||| | |||||||    
T  34634260 ttatattattgtttacaatgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctc 34634346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 16653018 - 16652957
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccct-cccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||    
T  16653018 cgtaatttaaaaaagaaaagtaaaccctccccctccaaaaccctcaatccaaacacaccctt 16652957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 311
Target Start/End: Complemental strand, 20472933 - 20472702
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaa--ggaatggaggatttacttttcgtttttaaattacggactatatacat-gtttttctaaaataaatta 178  Q
    ||||||||||||||||||||| ||| |||||  |||| | |||| | ||||||  ||||||||||||| || || ||  | ||||||  ||||||||| |    
T  20472933 gtgtgtttggattgaaggttt-agaagggaaagggaaggaaggactcacttttattttttaaattacgaacaatgtaagttgttttttaaaaataaatca 20472835  T
Q  179 agtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccc 278  Q
    ||| |  |||||||||||||||||| | |||||| ||  ||  | || ||| || ||   |||| |||||||  |||||||||||| ||||||||| |||    
T  20472834 agtgtttttgaagtattatatgatcatatatcatattgttaattcaattttctaaaatttattttataatgtctgtaatttaaaaaagaaaagtaagccc 20472735  T
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    | ||||| ||| || || |||||||||||||||    
T  20472734 ttccctcttaatccctctatccaaacacaccct 20472702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 27487071 - 27487128
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||||||||||||  |||||||| | ||||||||||||||||||| |||||||||||    
T  27487071 atgtttttctaaaaccaattaagtgttattgaagtattatatgatcatttatcatgtt 27487128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 30582010 - 30581916
Alignment:
Q  125 ttacttttcgtttttaaattacggac------tatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||||||| ||||||||||||||||      |||||| |||| ||| ||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  30582010 ttacttttcttttttaaattacggacggacactatata-atgtgttt-taaaacaaattaagtgtgattgaagtattatatgatcatttatcatgtt 30581916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 5562012 - 5562102
Alignment:
Q  125 ttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||||||| ||||||||||||| |  ||||| ||  |||| ||||||||||| |||||||| ||| |||||||||||| ||||||| ||||    
T  5562012 ttacttttcatttttaaattacgtataatataaattattttttaaaataaatt-agtatgatagaaatattatatgatcatttatcaagtta 5562102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 43732933 - 43732859
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||| || |||||  |||||||||| | || ||| |||||||||| ||||||||||||||||    
T  43732933 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 43732859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 286
Target Start/End: Original strand, 11575582 - 11575615
Alignment:
Q  253 gtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||||||||||||||||||||||||    
T  11575582 gtaatttaaaaatgaaaagtaaaccctcccctcc 11575615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 34196418 - 34196514
Alignment:
Q  186 ttgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccc 283  Q
    ||||||||||||||||||||||||| ||||  ||  | || ||| || ||| ||||| |||||||  |||||||||||| ||||||||| ||||||||    
T  34196418 ttgaagtattatatgatcgtttatcttgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaaaa-gaaaagtaagccctcccc 34196514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 3726859 - 3726935
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||||| || |||||  |||||||| |||| ||| | |||| ||||| ||||||||||||||||    
T  3726859 ttttagggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggac 3726935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 8815298 - 8815350
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||| | | |||||||||||||||||| |||||| |||||||||||||    
T  8815298 aaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctcc 8815350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 34633819 - 34633859
Alignment:
Q  159 tgtttttctaaaataaattaagtatgattgaagtattatat 199  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  34633819 tgtttttctaaaataaatcaagtgtgattgaagtattatat 34633859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 6453268 - 6453391
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattta 260  Q
    ||||| ||||||| ||||||| |  |||||||||||||||||   ||||||||||| ||  | || ||| || ||| ||||| |||||| | ||||||||    
T  6453268 tttttttaaaatatattaagtgtttttgaagtattatatgattacttatcatgttattaattcaattttctaaaaatcattttataatgattgtaattta 6453367  T
Q  261 aaaatgaaaagtaaaccctcccct 284  Q
    |||| |||||| ||  ||||||||    
T  6453368 aaaaggaaaagcaagtcctcccct 6453391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 11785598 - 11785555
Alignment:
Q  249 gttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaacc 292  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||    
T  11785598 gttcataatttaaaaaagaaaagtaaactctcccctcctaaacc 11785555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 31543072 - 31543143
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacgga 149  Q
    ||||| ||||||||| || ||||| ||||||||||| | || ||| |||||||||| |||||||||||||||    
T  31543072 agggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacgga 31543143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 35694817 - 35694742
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacacc 309  Q
    ||||||||| ||||| |  |||||||||||||||||| ||||  ||||||||||||||| || || ||||| ||||    
T  35694817 aaaacattttataatatctgtaatttaaaaatgaaaactaaattctcccctcctaaaccctcaattcaaacgcacc 35694742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 37032447 - 37032389
Alignment:
Q  253 gtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||| ||||| ||||| ||||| |||||||||||| ||||||||| ||||||    
T  37032447 gtaatttaaaaaagaaaaataaactctccc-tcctaaaccttcaatccaaacaaaccctt 37032389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 8671957 - 8671912
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatc 203  Q
    |||| ||| |||||||||||||||||  ||||||||||||||||||    
T  8671957 atgtatttttaaaataaattaagtatttttgaagtattatatgatc 8671912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 8815385 - 8815141
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||||| ||| | || ||| || ||||||  ||||||||||||| ||  | || | ||||||| | ||||||||    
T  8815385 agggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacgaacactgtaaaatgttttt-tcaaataaat 8815287  T
Q  177 taa-gtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa- 274  Q
    ||| || |  |||||||||||||| ||| |||||||||||  |   | || ||| || ||| ||||| ||||||| ||||||||||||| |||||||||     
T  8815286 taaagtgtttttgaagtattatataatcatttatcatgttgttgattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaag 8815187  T
Q  275 -----accc----tcccctcctaaaccttccatccaaacacaccct 311  Q
         |||     |||||||||||||| ||||||||||||||||||    
T  8815186 tcatcacctctcttcccctcctaaaccctccatccaaacacaccct 8815141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 308
Target Start/End: Complemental strand, 2412999 - 2412967
Alignment:
Q  276 ccctcccctcctaaaccttccatccaaacacac 308  Q
    ||||||||||||||||| |||||||||||||||    
T  2412999 ccctcccctcctaaaccctccatccaaacacac 2412967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 4247732 - 4247764
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||||||||||||| |||||||||||||||    
T  4247732 tcccctcctaaaccttcaatccaaacacaccct 4247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 286
Target Start/End: Original strand, 7503131 - 7503163
Alignment:
Q  254 taatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||| |||||||||||||||||||||    
T  7503131 taatttaaaaacgaaaagtaaaccctcccctcc 7503163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 26167846 - 26167894
Alignment:
Q  167 taaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||||||||| |||  | ||||||||||||||||||| |||||||||||    
T  26167846 taaaataaataaagagttattgaagtattatatgatcatttatcatgtt 26167894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 286
Target Start/End: Original strand, 31543249 - 31543281
Alignment:
Q  254 taatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||| |||||||||||||||||||||    
T  31543249 taatttaaaaaagaaaagtaaaccctcccctcc 31543281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 31738635 - 31738667
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||| ||||||||||||||||||    
T  31738635 tcccctcctaaaccctccatccaaacacaccct 31738667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 43732899 - 43732931
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||| ||||||||||||||||||    
T  43732899 tcccctcctaaaccctccatccaaacacaccct 43732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 7e-77; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 75 - 286
Target Start/End: Original strand, 45741886 - 45742099
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaat 172  Q
    |||||||||||||||||||||| |||||  |||||||| ||||| ||||||||||||||  |||||||||||||||||||||| | ||||||||||||||    
T  45741886 ttttagggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacggactatataacttgtttttctaaaat 45741985  T
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  45741986 aaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 45742085  T
Q  273 aaaccctcccctcc 286  Q
    |||| |||||||||    
T  45742086 aaactctcccctcc 45742099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 79 - 286
Target Start/End: Complemental strand, 31348565 - 31348356
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    ||||||||||||||||||  ||||  |||||||||| | || ||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  31348565 agggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaat 31348466  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    || || |||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  31348465 tatgtgtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 31348366  T
Q  277 cctcccctcc 286  Q
    ||| ||||||    
T  31348365 ccttccctcc 31348356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 77 - 305
Target Start/End: Complemental strand, 46007947 - 46007715
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataa 174  Q
    |||| ||||||||||||||| |||||  |||||||||| | || ||| |||||||||| |||||||||| | ||||||||| | ||||||| ||||||||    
T  46007947 ttagagtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataa 46007848  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttt-ataaaaca-tttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||| |||||| ||||  ||||||||||||||||||||    
T  46007847 attaagtgagattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaagt 46007748  T
Q  273 aaaccctcccctcctaaaccttccatccaaaca 305  Q
    |||||||||||||||||||| ||||||||||||    
T  46007747 aaaccctcccctcctaaaccctccatccaaaca 46007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 79 - 286
Target Start/End: Original strand, 54935067 - 54935278
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg--aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaa 175  Q
    |||||||||||||||||| |||||  |||||||||| | ||  ||| |||||||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  54935067 agggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataaa 54935166  T
Q  176 ttaagtatgattgaagtatt-atatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||| || |||||||||| ||| ||||||||||||||||||| |||    
T  54935167 ttaagtgtgattgaagtatttatatgatcgtttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaataa 54935266  T
Q  275 accctcccctcc 286  Q
    ||||||||||||    
T  54935267 accctcccctcc 54935278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 79 - 286
Target Start/End: Original strand, 54320435 - 54320643
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaatt 177  Q
    |||||||||||||||||| |||||  ||||| |||| | ||||| |||  ||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  54320435 agggtgtgtttggattgagggtttaggagggaaagggagggagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaatt 54320534  T
Q  178 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||| ||| |||||||||||||| ||||  |||||    
T  54320535 aagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaacc 54320634  T
Q  278 ctcccctcc 286  Q
    |||||||||    
T  54320635 ctcccctcc 54320643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 77 - 312
Target Start/End: Complemental strand, 47433955 - 47433717
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaat-ggaggatttacttttcgtttttaaattacggactatat--acatgtttttctaaaata 173  Q
    ||||||||||||||| |||| |||||  |||||||||| |  ||||| |||||||||| |||||||||||| |||||||   |||||||||| |||||||    
T  47433955 ttagggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaata 47433856  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||| |||| |||||| |||||||| |||||||| | ||||||||||| ||||| ||    
T  47433855 aattaagtgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaatta 47433757  T
Q  274 aaccc-tcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||| |||||||||||||| |||||| |||| |||||||    
T  47433756 aacccttcccctcctaaaccctccatctaaacgcaccctt 47433717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 27735749 - 27735987
Alignment:
Q  83 tgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaag 180  Q
    ||||||||||| || |||||  |||||||||| | | |||| |||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaag 27735848  T
Q  181 tatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccc-- 278  Q
    | ||||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||| ||| ||||||||||||||||||| | |||||      
T  27735849 tgtgattgaagtattatatgatcatttatcatgttaatatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaacccta 27735948  T
Q  279 --------tcccctcctaaaccttccatccaaacacacc 309  Q
            |||||||||||||| ||||||||||||||||    
T  27735949 tcctcccttcccctcctaaaccctccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 124 - 286
Target Start/End: Complemental strand, 49735666 - 49735503
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||| ||||| |||||||| ||||||||||||| |||||||||||||||||||| |||| |||| ||| |||||||| ||||||||||||||||||| ||    
T  49735666 tttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaatattatattatcgtttatcatgttaataggt 49735567  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||| || |||||||||  ||| ||||||||||||||||||||| |||||||||||||    
T  49735566 taactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcc 49735503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 258
Target Start/End: Original strand, 26166934 - 26167118
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||||||||||||||| |||||  |||||||| |||  ||||  |||  ||||| |||||||||||| ||||||||| ||||||| |||||||||    
T  26166934 tttagggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattacagactatataacatgtttctctaaaata 26167033  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatt 258  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| | ||| |||||||    
T  26167034 aattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgtccgtaatt 26167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 79 - 286
Target Start/End: Complemental strand, 1968603 - 1968386
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatggagga-tttacttttcgtttttaaattacggactatatac-atgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||||||||| | ||| || |||| ||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  1968603 agggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaataaat 1968504  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttta-----taaa---acatttcataatgttcgtaatttaaaaatgaa 268  Q
     | || |||||||||||||||||||||||||||||||||||||||||||||||| |     ||||   | |||||||| ||| | |||||||| | ||||    
T  1968503 caggtgtgattgaagtattatatgatcgtttatcatgttaatatgttaacttttaaaaagttaaaaagatatttcatagtgtccataatttaatattgaa 1968404  T
Q  269 aagtaaaccctcccctcc 286  Q
    ||||||||||||||||||    
T  1968403 aagtaaaccctcccctcc 1968386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 139 - 275
Target Start/End: Original strand, 36151637 - 36151773
Alignment:
Q  139 taaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaa 237  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||     
T  36151637 taaattacagactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaac-ttttaaaaat 36151735  T
Q  238 catttcataatgttcgtaatttaaaaatgaaaagtaaa 275  Q
    |||||  || ||||| ||||||||||||||||||||||    
T  36151736 cattttctagtgttcataatttaaaaatgaaaagtaaa 36151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 169 - 312
Target Start/End: Original strand, 34110897 - 34111039
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaa 268  Q
    ||||||| ||||| || || || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |  ||||||||||||||| ||    
T  34110897 aaataaagtaagtgtgcttaaaatattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcacagt-atcgtaatttaaaaataaa 34110995  T
Q  269 aagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||||||||||||| |||||| ||||||||||||    
T  34110996 aagtaaaccctcccctcctaaaccctccatctaaacacaccctt 34111039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 35248738 - 35248895
Alignment:
Q  130 tttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactt 228  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaactt 35248837  T
Q  229 tttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    || | |||| |||    | ||| | |||||||||| ||||||||||||||||||||||    
T  35248838 ttaaaaaaatattcttgagtgtccataatttaaaattgaaaagtaaaccctcccctcc 35248895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 135 - 282
Target Start/End: Complemental strand, 5731017 - 5730869
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttat 233  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| || |     
T  5731017 tttttaaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaa 5730918  T
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    |||| |||| |||  || ||||||||||||||||||  |||||||||||    
T  5730917 aaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctccc 5730869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 264
Target Start/End: Original strand, 16400797 - 16400987
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||| ||||| ||||||||| |||||  |||| ||||| | || |||||| ||||||  |||||| | |||  |||||| | |||||||||||||||||    
T  16400797 tttagtgtgtgattggattgagggtttaggaggagaagggaggggaggattcacttttattttttatactacaaactatacaacatgtttttctaaaata 16400896  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaa 264  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| ||| | |||||||||||    
T  16400897 aattaattatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcatagtgtccctaatttaaaaa 16400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 123 - 312
Target Start/End: Complemental strand, 24565543 - 24565345
Alignment:
Q  123 atttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatg 221  Q
    |||||| |||| |||||||||||||| ||||||| |||||||||||| |||||  | ||  |||||||||||||||||| | |||||||| ||||||| |    
T  24565543 atttacatttcttttttaaattacgggctatataacatgtttttctataataa--tgagcgtgattgaagtattatatgtttgtttatcacgttaataag 24565446  T
Q  222 ttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccc----------tcctaaaccttccatccaaacacaccct 311  Q
    ||||||||||| ||| |||||| |||| | ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||    
T  24565445 ttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaaccttccatccaaacacaccct 24565346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 286
Target Start/End: Original strand, 28332848 - 28333013
Alignment:
Q  122 gatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatat 220  Q
    |||||||||||| ||||||||||||  |||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  28332848 gatttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgtttaccaggttaatat 28332947  T
Q  221 gttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    | |||  ||||| |||| ||||| || |||| ||||||||||||  |||||||||| || ||||||    
T  28332948 gctaatgttttagaaaatatttcgtagtgttggtaatttaaaaacaaaaagtaaactcttccctcc 28333013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 29798288 - 29798490
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  ||||||||| ||  |||   |||||||||  |||||||||||| ||||||||| |||||||||||    |||||    
T  29798288 agggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttct----taaat 29798383  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgtt-aatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa 275  Q
     |||| ||||||||||||||||||||||||||| ||||| || ||||||| |||||| ||||||||||||| ||| ||||||||||||||||||| | ||    
T  29798384 caagtgtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactgaa 29798483  T
Q  276 ccctccc 282  Q
    |||||||    
T  29798484 ccctccc 29798490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 41174397 - 41174554
Alignment:
Q  130 tttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactt 228  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||| || | ||||||| ||||||||||||| ||||| ||||||||||| ||||||    
T  41174397 tttcttttttaaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattatatgatcatttattatgttaatatgctaactt 41174496  T
Q  229 tttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||| ||| ||||||||| ||| | ||| ||||||||||||| |||||| ||||||||    
T  41174497 tttaaaaaccatttcatagtgtccctaaattaaaaatgaaaactaaaccatcccctcc 41174554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 286
Target Start/End: Original strand, 44784036 - 44784200
Alignment:
Q  122 gatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatat 220  Q
    |||||||||||| ||||||||||||  || ||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  44784036 gatttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatat 44784135  T
Q  221 gttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||  |||| |||| ||||| || ||||||||||||||||| ||||||||||| || ||||||    
T  44784136 gttaac-gtttagaaaatatttcgtagtgttcgtaatttaaaaacgaaaagtaaactcttccctcc 44784200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 286
Target Start/End: Complemental strand, 17938306 - 17938142
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttcta-aaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatg 221  Q
    |||||||||| ||||||||||||  |||||||| ||| ||||| |  ||||||||||||| |||||||||||||||||||||||||||||||||| |||     
T  17938306 tttacttttcttttttaaattacaaactatataacatatttttttttaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattatt 17938207  T
Q  222 ttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||| |||||| |||||||| |||||||| | ||||||||||| ||||| ||||| || ||||||    
T  17938206 ttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaactcttccctcc 17938142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 81 - 282
Target Start/End: Complemental strand, 2248043 - 2247842
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaatta 178  Q
    |||||||||||||||| |||||  |||| |||| ||| ||||  |||||||||| |||||||||||| || |||||| ||||||||||||||| |||| |    
T  2248043 ggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacaga-tatataacatgtttttctaaaaaaaat-a 2247946  T
Q  179 agtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccc 278  Q
     || ||||||||||||||||| || ||||||||| |||||| |||||  |||||  |||||||| ||||||| ||||||||||||||||||| | |||||    
T  2247945 tgtgtgattgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaaatgaaccc 2247846  T
Q  279 tccc 282  Q
    ||||    
T  2247845 tccc 2247842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 124 - 285
Target Start/End: Complemental strand, 45132693 - 45132533
Alignment:
Q  124 tttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt 223  Q
    |||||||||| ||||||||||||||||||||||      | | ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  45132693 tttacttttcttttttaaattacggactatataa-----tatgtaaaataaattaagtgtgattgaagtattatatgatcgtttatcattttaatatgtt 45132599  T
Q  224 aactttttataaaacatttcataatgttcgtaatttaaaa-----atgaaaagtaaaccctcccctc 285  Q
    ||||||||| |||||||||| || ||| | ||||||||||     |||||||||||||| |||||||    
T  45132598 aacttttta-aaaacatttcgtagtgtacataatttaaaaagattatgaaaagtaaaccatcccctc 45132533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 124 - 285
Target Start/End: Original strand, 6891406 - 6891568
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||| ||||| |||||||| |||  | |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |    
T  6891406 tttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttataatgttattattt 6891505  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    ||| |||||  |||||| |||||| ||| | ||||||||||| |||||  |||| ||||||||    
T  6891506 taatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaatcaaactctcccctc 6891568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 37711138 - 37711286
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg------aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaa 171  Q
    |||||||||||||||||| |||||  |||||||||| | ||      ||| |||  ||||| |||||||||||||||||||||| ||||||| |||||||    
T  37711138 agggtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaaaa 37711237  T
Q  172 taaattaagtatgattgaagtattatatgatcgtttatcatgttaatat 220  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  37711238 taaattaagtgtgattgaagtattatatgatcatttatcatgttaatat 37711286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 311
Target Start/End: Original strand, 43961491 - 43961644
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    |||||||| ||||||||||||||| |  |||||||||||||||||| ||||||||||| |||  | || ||| || ||| ||||| ||||||||| ||||    
T  43961491 atgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgataattcaattttctaaaaatcattttataatgttcataat 43961590  T
Q  258 ttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||| ||||| ||| |||||||||| ||| || ||||||||||||||||||    
T  43961591 ttaaaaaagaaaaataagccctcccctcataatccctccatccaaacacaccct 43961644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 2917151 - 2917061
Alignment:
Q  134 gtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt 223  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||    
T  2917151 gtttttaaattccggactatataacatgattttctaaaataaatttattgtgattgaagtattatatgatcgtttatcatgttaatatgtt 2917061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 312
Target Start/End: Original strand, 55080660 - 55080814
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    ||||||||  ||||||| |||||| |  |||||||||| ||||||| |||||||||||  ||  | || ||| || |||  |||| ||||||||||||||    
T  55080660 atgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgttcgtaat 55080759  T
Q  258 ttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||| |||||||||  |||||| ||||||||| |||||||||||||||||||    
T  55080760 ttaaaaaagaaaagtaagtcctcccatcctaaaccctccatccaaacacaccctt 55080814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 282
Target Start/End: Complemental strand, 21695132 - 21694929
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaat-ggaggatttacttttcgtttttaaattacggactatatacatgtttttctaaaataaatt 177  Q
    |||||||||||||||||  |||||  ||||||||||||  ||||| ||||||||||  |||||||||| |||| |||||  |  |||| |  ||||||||    
T  21695132 agggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatataatttattttttttaataaatt 21695033  T
Q  178 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
    |||| |||||||||||||||||||||  ||||||| ||  ||| | || || ||| ||| ||||| ||| ||| ||||||||||||| ||||||||| ||    
T  21695032 aagtgtgattgaagtattatatgatc-attatcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaagcc 21694934  T
Q  278 ctccc 282  Q
    |||||    
T  21694933 ctccc 21694929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 75 - 309
Target Start/End: Complemental strand, 17182733 - 17182495
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagagggg-aaggaatggaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaat 172  Q
    |||||||||||||||||||||| |||||  |||||| |||||| |||||| ||||||||  ||||||||||||| || |  | | || ||||| ||||||    
T  17182733 ttttagggtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaaaat 17182634  T
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttt--tataaaacatttcataatgttcgtaatttaaaaatgaaaa 270  Q
    ||||||||| |  |||||||||||||||||| |||||||| ||  ||  | || ||||   | ||| ||||| |||| ||   ||||||||||| |||||    
T  17182633 aaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaatttttgcaaaaaatcattttataacgtcaataatttaaaaaagaaaa 17182534  T
Q  271 gtaaaccctcccctcctaaaccttccatccaaacacacc 309  Q
    ||||| | |||||||||||| | || |||||||||||||    
T  17182533 gtaaatcttcccctcctaaaacctctatccaaacacacc 17182495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 118 - 280
Target Start/End: Original strand, 55510210 - 55510371
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    |||||| ||||||||| ||||||| |||  ||| || || | ||||||| ||||||||||||||| ||| ||||||||||||||||| || ||||||||     
T  55510210 ggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaagtgtgactgaagtattatatgatcattcatcatgttg 55510309  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctc 280  Q
     ||| || | ||||| ||||| |||| ||| |||||||||||||||||| ||||||||||||||    
T  55510310 ttat-ttcaatttttttaaaatattttatagtgttcgtaatttaaaaat-aaaagtaaaccctc 55510371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 212
Target Start/End: Original strand, 22920978 - 22921117
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||||||||||||||| |||||  ||||| ||  ||  |||| |||||| |||| ||||||||||||  |||| ||| |||||||||||| ||||    
T  22920978 tttagggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaata 22921077  T
Q  174 aattaa-gtatgattgaagtattatatgatcgtttatcat 212  Q
    ||| || || ||||||||||||||||||||||||||||||    
T  22921078 aatcaaagtgtgattgaagtattatatgatcgtttatcat 22921117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 22970821 - 22970682
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||||||||||||||| |||||  ||||| ||  ||  |||| |||||| |||| ||||||||||||  |||| ||| |||||||||||| ||||    
T  22970821 tttagggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaata 22970722  T
Q  174 aattaa-gtatgattgaagtattatatgatcgtttatcat 212  Q
    ||| || || ||||||||||||||||||||||||||||||    
T  22970721 aatcaaagtgtgattgaagtattatatgatcgtttatcat 22970682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 308
Target Start/End: Original strand, 22186800 - 22186950
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    |||||||| |||||||||| |||| |  |||||||||||||| ||| |||||||||||  ||  | || ||| || ||| ||||| ||||||| ||||||    
T  22186800 atgtttttttaaaataaataaagtgtttttgaagtattatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaat 22186899  T
Q  258 ttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacac 308  Q
    ||||||| ||||||| |  ||||||||  |||||| |||||||||||||||    
T  22186900 ttaaaaaagaaaagtgagtcctccccttttaaaccctccatccaaacacac 22186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 286
Target Start/End: Complemental strand, 47846303 - 47846090
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatataca-tgtttttct-aaaat 172  Q
    |||| |||||||||||||||| ||||| ||||| ||||| |||| ||| |||||||||  ||||||||||| | || || || | ||||||| | |||||    
T  47846303 tttaaggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaat 47846204  T
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||||||||| |  |||||||||||||||||  |||||||||||  ||  | || ||| || |||  |||| ||||||| |  |||||||||| |||||||    
T  47846203 aaattaagtgtttttgaagtattatatgattatttatcatgttcttaattcaattttgtaaaaattattttataatgtccagaatttaaaaaagaaaagt 47846104  T
Q  273 aaaccctcccctcc 286  Q
    |||| |||||||||    
T  47846103 aaactctcccctcc 47846090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 56135749 - 56135965
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||||||||| | || ||| || | ||||  ||||||||||||| || || || | ||||||| ||||||||||    
T  56135749 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 56135848  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| |  |||||||||||||||||| ||||||||||||||   | ||  |||| |||||| ||             |||||||||| ||||||||| |    
T  56135849 taagtgtttttgaagtattatatgatcatttatcatgttaat---tcaa--ttttctaaaacttt-------------aatttaaaaaagaaaagtaagc 56135930  T
Q  277 cctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||||| ||||||||||||||||||    
T  56135931 cctcccctcctaaaccctccatccaaacacaccct 56135965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 6938394 - 6938492
Alignment:
Q  224 aactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc----------taaaccttccatccaaacacaccctt 312  Q
    ||||||||| ||||||||| ||||| | ||||||||||||||||||||| |||||||||||||          ||||||||||||||||||||||||||    
T  6938394 aactttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccctt 6938492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 41227567 - 41227494
Alignment:
Q  237 acatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccc 310  Q
    |||||| ||| ||||| ||||||||||| || |||||| |||| |||||||||||| |||||||||||||||||    
T  41227567 acattttatattgttcataatttaaaaaagagaagtaagccctgccctcctaaaccctccatccaaacacaccc 41227494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 14539357 - 14539455
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattta 260  Q
    |||| ||||||||||||||| |  |||||||||||||||||| ||||| |||||  ||  |||| ||| ||  |||||||| |||||||||||||||||    
T  14539357 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttattatgttcttaatttaattttctaacaaacattttataatgttcgtaattta 14539455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 4437601 - 4437658
Alignment:
Q  254 taatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||  |||| | |||||||||||||||||||||| |||||||||||||||    
T  4437601 taatttaaaaaataaaaatgaaccctcccctcctaaaccttcaatccaaacacaccct 4437658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 264
Target Start/End: Complemental strand, 34108379 - 34108283
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataa-aacatttcataatgttcgtaatttaaaaa 264  Q
    |||||||||||||||||||||||||||||||  ||  ||||||||||| |||| |||  |||||| || ||||||| ||||| | |||||||||||||    
T  34108379 aaaataaattaagtatgattgaagtattatacaataatttatcatgtt-atattttacttttttaaaataacattttataatatccgtaatttaaaaa 34108283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 34995132 - 34995246
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    |||||||||||||||||||||||| |  ||||||||||||| |||  |||||||||||  ||  | || ||| || ||| ||||| ||||| | ||||||    
T  34995132 atgtttttctaaaataaattaagtgtttttgaagtattataagattatttatcatgtt--taattcaattttctaaaaatcatttgataatatccgtaat 34995229  T
Q  258 ttaaaaatgaaaagtaa 274  Q
    ||||||| |||||||||    
T  34995230 ttaaaaaagaaaagtaa 34995246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 286
Target Start/End: Complemental strand, 54576479 - 54576362
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaa 268  Q
    ||||||||||| | |  |||||||||||||| ||| ||||||| |||  ||  | || ||| |||||| ||||| ||||||| |||||| |||||| |||    
T  54576479 aaataaattaaatgtttttgaagtattatataatcatttatcacgttgttaattcaattttctataaatcattttataatgtccgtaatctaaaaaagaa 54576380  T
Q  269 aagtaaaccctcccctcc 286  Q
    |||||| |||||||||||    
T  54576379 aagtaagccctcccctcc 54576362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 7977741 - 7977505
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaa-taaa 175  Q
    |||||||||||||||||| |||||  |||||||| |||  ||||| || | ||||  ||||||||||||| |  || || | ||||||| | ||| ||||    
T  7977741 agggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacgaagaatgtaaaatgttttttttaaagtaaa 7977642  T
Q  176 ttaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattta-aaaatgaaaagtaa 274  Q
    |||| | |  |||||||||||||||||| |||||||||||  ||  | || |||  | | |  |||| ||||||||||||||||| |||| |||||||||    
T  7977641 ttaattgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaatattattttataatgttcgtaatttaaaaaaagaaaagtaa 7977542  T
Q  275 accctcccctcctaaaccttccatccaaacacaccct 311  Q
     |||||||||||    || ||||||||||||||||||    
T  7977541 gccctcccctccctttccctccatccaaacacaccct 7977505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 37761557 - 37761673
Alignment:
Q  170 aataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaa 269  Q
    |||||||||||| |  ||||||| |||||| ||| |||||||||||  ||  | || ||| || ||| ||||||||||||| | ||||||||||| ||||    
T  37761557 aataaattaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtccataatttaaaaaagaaa 37761656  T
Q  270 agtaaaccctcccctcc 286  Q
    || || |||||||||||    
T  37761657 aggaagccctcccctcc 37761673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 54001238 - 54001153
Alignment:
Q  186 ttgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    |||||||||||||||||| ||||||||||||||   | || |||||| |||  |||| ||||||| |||||||||||||  ||||||||    
T  54001238 ttgaagtattatatgatcatttatcatgttaat---tcaattttttaaaaattattttataatgtccgtaatttaaaaaacaaaagtaa 54001153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 23813188 - 23813111
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||||| ||| ||| |||||||||| ||||||||||||  |||| ||||| ||||| |||||||| ||| |||||    
T  23813188 aaaacattttatagtgtccgtaatttaacaatgaaaagtaagtcctctcctccaaaaccctccatccatacataccct 23813111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 54167147 - 54167228
Alignment:
Q  227 tttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacac 308  Q
    ||||| |||||||||| |||| ||| ||||||||||||| |||| ||||| |||  |||||||||| | |||| ||||||||    
T  54167147 tttttttaaaacattttataaggtttgtaatttaaaaataaaaaataaacactcatctcctaaaccatacatctaaacacac 54167228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 6938287 - 6938359
Alignment:
Q  85 tgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata 156  Q
    |||||||||||| | |||  |||||||||| | | ||||||||| ||||| ||||||||||||||||||||||    
T  6938287 tgtttggattgatgatttaggaggggaagggaggagaggatttatttttcctttttaaattacggactatata 6938359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 49735468 - 49735540
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    |||||||||||||||||| |||||  |||||||| |||  ||||| || ||||||| ||||||||||||||||    
T  49735468 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggac 49735540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 6938491 - 6938420
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacgga 149  Q
    ||||||||||||||| ||||||||  |||||||| |||  ||||| || ||||||| |||||||||||||||    
T  6938491 agggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacgga 6938420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 11842399 - 11842442
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcat 212  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||    
T  11842399 aaatgaattaagtctgattgaagtattatatgatcatttatcat 11842442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 41227576 - 41227619
Alignment:
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||    
T  41227576 aaattaagtgtgattgaagtattatatgatcatttatcacgtta 41227619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 23813142 - 23813240
Alignment:
Q  119 gaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| ||||||||| || |||||||||||||  ||| | ||||||||  ||| ||||| |||| | ||||||||| ||||||||| |||||| |||||    
T  23813142 gaggacttacttttcattgttaaattacggacactataaaatgtttttgaaaattaaataaagtgttattgaagtactatatgatcatttatcgtgtta 23813240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 54494723 - 54494769
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgttta 208  Q
    |||| |||||||| |||||| |||||||||||||||||||| |||||    
T  54494723 ttttttaaaataagttaagtgtgattgaagtattatatgattgttta 54494769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 54935140 - 54935106
Alignment:
Q  249 gttcgtaatttaaaaatgaaaagtaaaccctcccc 283  Q
    |||||||||||||||| ||||||||||||||||||    
T  54935140 gttcgtaatttaaaaaagaaaagtaaaccctcccc 54935106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 54935315 - 54935241
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||| || |||||  |||||||| |||  ||||| |||| ||||| ||||||||||||||||    
T  54935315 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 54935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 18516634 - 18516577
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||||||  ||||| |||||||| ||||||||| ||||| ||||| |||||||||||    
T  18516634 atgtttttaaaaaatgaattaagtgtgattgaagcattatgtgatcatttatcatgtt 18516577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 18810720 - 18810659
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacacc 309  Q
    |||| |||||||||||| ||||||||| |||||| ||| | || |||||||| |||||||||    
T  18810720 tgtttgtaatttaaaaaggaaaagtaagccctcctctcatgaatcttccatctaaacacacc 18810659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 276
Target Start/End: Original strand, 36278357 - 36278450
Alignment:
Q  183 tgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||||||||| |||| |||  |||||||| |||||| ||||| ||| || |||| ||||| || |||  |||||||||||| ||||| |||||    
T  36278357 tgattgaagtactataagattatttatcatattaatacgttaaatttataaaaaatatttcgtagtgtctgtaatttaaaaacgaaaactaaac 36278450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 41174557 - 41174590
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||| |||||||||||||||||||    
T  41174557 tcccctcctaaaccctccatccaaacacaccctt 41174590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 53260750 - 53260717
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||| |||||||||||||||||||    
T  53260750 tcccctcctaaaccctccatccaaacacaccctt 53260717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 23332686 - 23332650
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgt 205  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  23332686 aaataaattaagtgtgatagaagtattatatgatcgt 23332650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 37711371 - 37711295
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||||| || |||||  |||||||| |||  ||||| ||||  |||| ||||||||||||||||    
T  37711371 ttttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggac 37711295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 37711335 - 37711367
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||| ||||||||||||||||||    
T  37711335 tcccctcctaaaccctccatccaaacacaccct 37711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 47694435 - 47694487
Alignment:
Q  163 tttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||||||||| ||| ||||  | |||||||||||||||||| |||||||||||    
T  47694435 tttctaaaatcaatcaagtgcggttgaagtattatatgatcatttatcatgtt 47694487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 54935281 - 54935313
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||| ||||||||||||||||||    
T  54935281 tcccctcctaaaccctccatccaaacacaccct 54935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 56427057 - 56427133
Alignment:
Q  235 aaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||  ||| ||| ||||||||||||||| ||| | | ||||||||||||| ||  ||| ||||||||||||||    
T  56427057 aaacattctatagtgtccgtaatttaaaaatgcaaaatcagccctcccctcctatactatccgtccaaacacaccct 56427133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 5e-75; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 21773782 - 21774016
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgga-ggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    ||||| ||||||||||||||||||  |||||||||| | ||| || | |||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  21773782 agggtatgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaataaat 21773881  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||||    
T  21773882 taagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaac 21773981  T
Q  277 cctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||||| | ||||||||||||||||    
T  21773982 cctcccctcctaaacccttcatccaaacacaccct 21774016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 79 - 286
Target Start/End: Complemental strand, 41110565 - 41110356
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaat-ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||| |||||||||| |  ||| | ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  41110565 agggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataaat 41110466  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  41110465 taagtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaac 41110366  T
Q  277 cctcccctcc 286  Q
    | || |||||    
T  41110365 cttctcctcc 41110356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 76 - 312
Target Start/End: Complemental strand, 220644 - 220407
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    |||||||| ||||||||| || |||||  |||| ||||| | || || ||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  220644 tttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaata 220545  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    ||| ||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||    
T  220544 aatcaagtatgattgaagtgttataagattgtttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaacta 220445  T
Q  274 aaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    || |||||||||||||||| |||||||||| ||||||||    
T  220444 aa-cctcccctcctaaaccctccatccaaatacaccctt 220407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 77 - 312
Target Start/End: Complemental strand, 37102385 - 37102158
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgttttt-ctaaaataa 174  Q
    |||||||||||||||||||| |||||  ||||||||||         ||||||| || |||||||||||||||||||||| ||||||||| |||||||||    
T  37102385 ttagggtgtgtttggattgagggtttaggaggggaagg---------tttacttatcttttttaaattacggactatataacatgttttttctaaaataa 37102295  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    || |||| || ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||    
T  37102294 atcaagtgtggttgaagtattatatgatcgtt-attatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaa 37102196  T
Q  275 accctcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||||||| |||||||||||||||||||    
T  37102195 accctcccctcctaaaccctccatccaaacacaccctt 37102158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 124 - 311
Target Start/End: Complemental strand, 30200289 - 30200098
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtt---tatcatgttaata 219  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||| ||||||||||||   ||| |||||||||    
T  30200289 tttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagtactatatgatcgttgtttattatgttaata 30200190  T
Q  220 tgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||| ||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  30200189 tgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctcccctcctaaaccctccatccaaacacaccct 30200098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 24560217 - 24560461
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||| | |||||  |||||||||| | || ||| |||  ||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  24560217 agggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaataaat 24560316  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  24560317 taaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaac 24560416  T
Q  277 cctccc----------ctcctaaaccttccatccaaacacaccct 311  Q
     |||||          |||||||||| ||||||||||||||||||    
T  24560417 tctcccatccgttcccctcctaaaccctccatccaaacacaccct 24560461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 79 - 286
Target Start/End: Complemental strand, 25655216 - 25655005
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||||| ||||  ||||| ||||| | || ||| ||||  |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  25655216 agggtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataaat 25655117  T
Q  177 taagtatgattgaagtattatat--gatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    ||||| |||||||||||||||||  |||| |||||||| |||||||||||||| || | |||||||||| || |||||||||| ||||||||||||||||    
T  25655116 taagtgtgattgaagtattatatatgatcatttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaa 25655017  T
Q  275 accctcccctcc 286  Q
    ||||||||||||    
T  25655016 accctcccctcc 25655005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 124 - 307
Target Start/End: Original strand, 52185061 - 52185243
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttt-tctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatg 221  Q
    |||||||||||||||||||||||  | |||||| |||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  52185061 tttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgttaatatg 52185160  T
Q  222 ttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacaca 307  Q
    |||||||||||||||| ||||  || ||| | |||||||||||| |||| ||||||||||||||| ||||| | ||||||||||||    
T  52185161 ttaactttttataaaatattt--tagtgtccataatttaaaaat-aaaaataaaccctcccctcccaaacccttcatccaaacaca 52185243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 119 - 311
Target Start/End: Complemental strand, 41040153 - 41039950
Alignment:
Q  119 gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaa 217  Q
    |||| ||||||||||| |||||||||||||| || ||| |||| |||| ||||||||| ||||  |||||||||||||||||||| ||||||||||||||    
T  41040153 gagggtttacttttcgcttttaaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattatatgattgtttatcatgttaa 41040054  T
Q  218 tatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccc----------tcccctcctaaaccttccatccaaacaca 307  Q
    |||||||||||||||||||| |||||||| |||  ||||||||||| |||||| |||| ||          |||||||||||||||||||||||||||||    
T  41040053 tatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaattaaagcctacgctctcttcccctcctaaaccttccatccaaacaca 41039954  T
Q  308 ccct 311  Q
    ||||    
T  41039953 ccct 41039950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 156 - 286
Target Start/End: Complemental strand, 16275870 - 16275740
Alignment:
Q  156 acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgta 255  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| || |    
T  16275870 acatgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgtccgaa 16275771  T
Q  256 atttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||| ||| ||| |||||||||    
T  16275770 atttaaaaatgaatagtgaactctcccctcc 16275740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 70 - 282
Target Start/End: Complemental strand, 9312722 - 9312510
Alignment:
Q  70 agatgttttagggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata----catgttttt 165  Q
    ||||| || |||| ||||||||||||| |||||  ||||||| ||    |||| |||  ||||| |||||||||||| |||||||||    |||| ||||    
T  9312722 agatgattaagggagtgtttggattgagggtttaggaggggaggg----gagggtttgattttcttttttaaattaccgactatataacatcatgatttt 9312627  T
Q  166 ctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaat 265  Q
    |||||||||||||||| |||||  ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||| |||  |||||||||||||    
T  9312626 ctaaaataaattaagtgtgatttgagtattatatgattgtttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaat 9312527  T
Q  266 gaaaagtaaaccctccc 282  Q
    |||||  ||||||||||    
T  9312526 gaaaatcaaaccctccc 9312510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 157 - 286
Target Start/End: Complemental strand, 36569067 - 36568939
Alignment:
Q  157 catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaa 256  Q
    ||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||  ||||||||||||| |||||| ||    
T  36569067 catgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgttcgaaa 36568968  T
Q  257 tttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||||||| ||||| |||||||||    
T  36568967 tttaaaaatgaaaa-taaactctcccctcc 36568939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 135 - 282
Target Start/End: Complemental strand, 18654787 - 18654639
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttat 233  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| || |     
T  18654787 tttttaaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaa 18654688  T
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    |||| |||| |||  || ||||||||||||||||||  |||||||||||    
T  18654687 aaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctccc 18654639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 84 - 286
Target Start/End: Original strand, 52473920 - 52474124
Alignment:
Q  84 gtgtttggattgaaggtttgagaggggaaggaatggaggattt-acttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagt 181  Q
    |||||||||||||  ||||| ||||||||| |||||  || || | ||||| ||||||||||||||| |||||| |||||| || ||||||||||||  |    
T  52473920 gtgtttggattgagagtttgggaggggaagaaatgggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaattacat 52474019  T
Q  182 atgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcc 281  Q
     |||||||||||||||||||  ||||||||| ||||||||||||||||||| |||| ||||||||   | |||||||||||||| |||||||||||||||    
T  52474020 gtgattgaagtattatatgactgtttatcatattaatatgttaactttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaaccctcc 52474119  T
Q  282 cctcc 286  Q
     ||||    
T  52474120 tctcc 52474124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 124 - 269
Target Start/End: Original strand, 14898022 - 14898172
Alignment:
Q  124 tttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |    
T  14898022 tttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcgtgttaatatat 14898121  T
Q  223 taacttt----ttataaaacatttcataatgttcgtaatttaaaaatgaaa 269  Q
    |||||||      | |||||||||  |||||| ||||||||||||||||||    
T  14898122 taactttaaaaaaaaaaaacattttgtaatgtccgtaatttaaaaatgaaa 14898172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 118 - 264
Target Start/End: Complemental strand, 2387964 - 2387817
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||||||||| ||| ||||| |||| ||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  2387964 ggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgtgattaaattattatatgatcgtttatcatgtta 2387865  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaa 264  Q
     ||| ||||||| ||| |||||||| |||| ||| |||||||||||||    
T  2387864 ttattttaacttattaaaaaacattccatagtgtccgtaatttaaaaa 2387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 127 - 276
Target Start/End: Original strand, 37807129 - 37807279
Alignment:
Q  127 acttttcgtttttaaattacggactatata-catgtttttctaaaataaa-ttaagtatgattgaagtattatatgatcgtttatcatgttaatatgtta 224  Q
    ||||||| |||||||| |||| |||||||| ||| |||||  |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||    
T  37807129 acttttcttttttaaactacgaactatataacat-tttttaaaaaataaaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatatta 37807227  T
Q  225 actttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    |||||||| ||||||||||||| ||| |  |||||||||| |||||||||||    
T  37807228 actttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaagtaaac 37807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 124 - 286
Target Start/End: Original strand, 46556189 - 46556353
Alignment:
Q  124 tttacttttcgtttttaaattacggactatatac-atgtttttctaaaataaattaagtatgattgaagtattatat--gatcgtttatcatgttaatat 220  Q
    |||| ||||| |||||||||||| |||||||||  ||||||||| |||||||||| ||| |||||||||||||||||  || ||||| ||||||||||||    
T  46556189 tttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattatatatgaccgtttgtcatgttaatat 46556288  T
Q  221 gttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
     ||||||||||| |||| || ||||| ||| ||||||| |||||||||||||||| ||||||||||    
T  46556289 cttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaa-cctcccctcc 46556353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 81 - 248
Target Start/End: Complemental strand, 43005981 - 43005812
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaatta 178  Q
    |||||||||||||||| |||||   |||| |||||| | ||||||||| ||||| |||||||||| |  |||||||| ||| |||||||||||||||||     
T  43005981 ggtgtgtttggattgagggtttataagggaaaggaaagagaggatttaattttcttttttaaattccaaactatataacatatttttctaaaataaattt 43005882  T
Q  179 agtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataat 248  Q
    | | ||||||||||||||||||||  |||||||| ||||||||||||||||||| |||| ||||||||||    
T  43005881 aatttgattgaagtattatatgatattttatcatattaatatgttaactttttaaaaaatatttcataat 43005812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 118 - 311
Target Start/End: Original strand, 651771 - 651969
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||||||||| |||||||||||  ||||||||| ||||||||||||||||||||||||| ||||| || ||||||| |||| ||| ||||||||    
T  651771 ggagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaattaagtgtgattaaaatattatacgatcctttgtcatgtta 651870  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccc-----tcctaaaccttccatccaaacacaccct 311  Q
     ||| |||| |||||  ||||||||||||| | | | |||||||||||  | |||||||||||||||     ||||||||| |||| |||||||||||||    
T  651871 ttattttaa-tttttcaaaaacatttcatagtttccataatttaaaaacaataagtaaaccctcccctcccttcctaaaccctccacccaaacacaccct 651969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 129 - 286
Target Start/End: Complemental strand, 27542124 - 27541966
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| ||||||||||| | |||||||| ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||  |    
T  27542124 ttttcttttttaaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattatatgatcgtttatcatgttaatatgttagat 27542025  T
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||  ||  |||||||| |||   |||||||||||||||| || |||| || |||||    
T  27542024 ttttaacaagtatttcatagtgtctctaatttaaaaatgaaatgtgaaccatctcctcc 27541966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 10748484 - 10748345
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatg-------atcgtttatcatgttaatatgttaac 226  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||| ||||  ||||||||||||       ||| ||||||||||||||||||||||    
T  10748484 tttttaaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattatatgaccttttatcatttatcatgttaatatgttaac 10748385  T
Q  227 tttttataaaacatttcataatgttcgtaatttaaaaatg 266  Q
    |||||| ||||||||| ||||||  |||||||||||||||    
T  10748384 tttttaaaaaacattttataatgcccgtaatttaaaaatg 10748345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 130 - 270
Target Start/End: Original strand, 55327422 - 55327563
Alignment:
Q  130 tttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactt 228  Q
    |||| |||||||||||||||||| ||| |||| |||||| |||||||| || | ||||||||| |||||||| |||||||| ||||||||| | ||||||    
T  55327422 tttcttttttaaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattatatgttcgtttattatgttaatacgctaactt 55327521  T
Q  229 tttataaaacatttcataatgttcgtaatttaaaaatgaaaa 270  Q
    |||| ||||||||||||||||| ||| ||||||||| |||||    
T  55327522 tttaaaaaacatttcataatgtccgtgatttaaaaacgaaaa 55327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 28582756 - 28582610
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||||||||||| ||| | |||  |||||||||| | || ||| |||||||||| |||||||||||||||| ||||| ||||||||||||| |||    
T  28582756 tttagggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagata 28582657  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatat 220  Q
    ||| |||| || |||||||||||||| ||||||||| ||||||||||    
T  28582656 aatcaagtgtggttgaagtattatattatcgtttattatgttaatat 28582610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 46204932 - 46205033
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| ||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||||||    
T  46204932 tttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcatttaacatattaatatgt 46205031  T
Q  223 ta 224  Q
    ||    
T  46205032 ta 46205033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 310
Target Start/End: Original strand, 40858646 - 40858798
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    |||||||| ||||||||||| ||| |  |||||||||||||||||| |||||||||||  ||  | || |||  | | | ||||| ||||||| ||||||    
T  40858646 atgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaagatcattttataatgtccgtaat 40858745  T
Q  258 ttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccc 310  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  40858746 ttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaacacaccc 40858798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 311
Target Start/End: Original strand, 48683693 - 48683848
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatca-tgttaatatgttaactttttataaaacatttcataatgttcgtaa 256  Q
    |||||||| ||||||||||||||| |  ||||| |||||||||||| ||||||| ||||  ||  | || ||  || ||| ||||| |||||||||||||    
T  48683693 atgtttttttaaaataaattaagtgtttttgaaatattatatgatcatttatcaatgttgttaattcaatttcctaaaaatcattttataatgttcgtaa 48683792  T
Q  257 tttaaaaatgaaaag-taaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||| |||||  ||||||||||||||||||||| || |||||||||||||||    
T  48683793 tttaaaaaagaaaaaataaaccctcccctcctaaaccctctatccaaacacaccct 48683848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 273
Target Start/End: Complemental strand, 40464069 - 40463919
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| ||| ||||| | || ||| ||| ||| |||||||||||||||||||||  ||||||| | ||||||||| ||||||||||||| | | |    
T  40464069 tttacttttcttttctaaatcaagggctacataacatatttttctaaaataaattaagtgagattgaatttttatatgattgtttatcatgttattgttt 40463970  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||  ||||| |||||| || ||| ||| ||||||||||||||||||||||    
T  40463969 taatattttaaaaaacaatttatagtgtccgtaatttaaaaatgaaaagta 40463919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 277
Target Start/End: Original strand, 12790377 - 12790573
Alignment:
Q  83 tgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaag 180  Q
    |||||||||||||| |||||  ||| ||||| ||  ||||| |||||||||| |||||| |||   | ||||||| |||||||||||| |||||||||||    
T  12790377 tgtgtttggattgagggtttaggagaggaagagagaggagg-tttacttttcttttttatattgtaggctatataacatgtttttctataataaattaag 12790475  T
Q  181 tatgattgaagtattatatgatcgtttatcatgttaatatgttaa-ctttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
    | | || |||||| ||||||||| || ||||||||| ||| ||||  |||||| |||| |||||||||||||| ||||||||||   |||||||||||    
T  12790476 tgtaatcgaagtaatatatgatctttcatcatgttattattttaatttttttaaaaaatatttcataatgttcataatttaaaatcaaaaagtaaacc 12790573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 42772123 - 42772266
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatga 267  Q
    |||||||||||||| |  |||||||||||||||||| |||||||||||  ||  | || |||  | ||| ||||| ||||||| |||||||| || | |     
T  42772123 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccgtaattttaagaagc 42772222  T
Q  268 aaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||    
T  42772223 aaagtaaaccttcccctcctaaaccctccattcaaacacaccct 42772266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 79 - 215
Target Start/End: Complemental strand, 27197893 - 27197755
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||| ||||||||||| |||| ||||| ||| |||||| | ||||||  ||||||||||||| || || || ||| ||||| ||||||||||    
T  27197893 agggtgtgtttgaattgaaggtttaagagaggaagagaaaggaggactcacttttattttttaaattacgaacaatgtaacatatttttttaaaataaat 27197794  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||||||  || ||||||||||||||| | |||||||||    
T  27197793 taagtatatttaaagtattatatgatcatctatcatgtt 27197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 311
Target Start/End: Original strand, 41414159 - 41414313
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    |||||||| |||||||||| |||  |  |||||||||||||||||| |||||||||||  ||  | || ||| || ||| ||||| ||||||| | | ||    
T  41414159 atgtttttttaaaataaatcaagcgtttttgaagtattatatgatcatttatcatgttgttaactcaattttctaaaaatcattttataatgtccctgat 41414258  T
Q  258 ttaaaaat-gaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||  ||||||||||| |||||||||||||||  |||||||||||||||||    
T  41414259 ttaaaaaaagaaaagtaaacactcccctcctaaacccaccatccaaacacaccct 41414313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 286
Target Start/End: Original strand, 34641077 - 34641199
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaa 261  Q
    |||| ||||||||||||||| |  |||||||||||||||||| |||||||||||  ||  | ||  |||| |||| ||||| ||||||| ||||||||||    
T  34641077 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaa--ttttctaaatcattttataatgtccgtaatttaa 34641174  T
Q  262 aaatgaaaagtaaaccctcccctcc 286  Q
    ||| ||||||||| |||||||||||    
T  34641175 aaaagaaaagtaagccctcccctcc 34641199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 218
Target Start/End: Complemental strand, 54574602 - 54574464
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaa 175  Q
    |||||||||||||||||||| |||||  || ||||||| || |    |||  ||||| ||||| |||||| ||||||||| || ||||||||||||||||    
T  54574602 ttagggtgtgtttggattgagggtttaggaagggaagggatag----tttgtttttctttttttaattacagactatataacacgtttttctaaaataaa 54574507  T
Q  176 ttaagtatgattgaagtattatatgatcgtttatcatgttaat 218  Q
    |||||  ||||||||||||||||| | |||||||||| |||||    
T  54574506 ttaagcgtgattgaagtattatataaccgtttatcatattaat 54574464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 28581291 - 28581221
Alignment:
Q  216 aatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||||||| |||| |||||| ||| |  |||||||||||||||||| |||||||||||||||    
T  28581291 aatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctcccctcc 28581221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 46978499 - 46978441
Alignment:
Q  249 gttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacaca 307  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  46978499 gttcgtaatttaaaaattaaaagtgaaccctcccctcctaaaccctcaatccaaacaca 46978441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 13082998 - 13082953
Alignment:
Q  185 attgaagtattatatgatcgtttatcatgttaatatgttaactttt 230  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  13082998 attgaagtattatatgatcgtttattatgttaatatgttaactttt 13082953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 51819285 - 51819228
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaat 218  Q
    ||||| ||||||||||| ||| |||||||||||||||| |||||||||||||||||||    
T  51819285 tttttttaaaataaatttagtgtgattgaagtattatacgatcgtttatcatgttaat 51819228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 286
Target Start/End: Original strand, 24253807 - 24253931
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaa 261  Q
    |||| ||||||||||||||| |  ||||||| |||||| ||| |||||||||||  ||  | |||||| || ||  ||||| ||||||| ||||||||||    
T  24253807 ttttttaaaataaattaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaactttctaaaactcattttataatgtccgtaatttaa 24253906  T
Q  262 aaatgaaaagtaaaccctcccctcc 286  Q
    ||| |||||||||| ||| ||||||    
T  24253907 aaaagaaaagtaaatccttccctcc 24253931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 651798 - 651739
Alignment:
Q  254 taatttaaaaatgaaaagtaaaccct-cccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||| |||||||||||||| ||||||||||||| || ||||||||||||||||    
T  651798 taatttaaaaaagaaaagtaaaccctccccctcctaaaccctcaatccaaacacaccctt 651739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 311
Target Start/End: Complemental strand, 34641065 - 34641002
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||||||  |||||| | ||||||||||||||||| || |||||||||||||||    
T  34641065 tgttcgtaatttaaaaaataaaagtgagccctcccctcctaaaccctcaatccaaacacaccct 34641002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 311
Target Start/End: Original strand, 37102324 - 37102383
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||||||||| || ||||||||| |||||||||||||| || |||||||||||||||    
T  37102324 cgtaatttaaaaaagataagtaaaccttcccctcctaaaccctcaatccaaacacaccct 37102383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 308
Target Start/End: Complemental strand, 42699816 - 42699625
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    |||||| | |||||| |||||||||||||| || ||||| | | |||||  |||||||||||||| |  |||||||||||||||||| |||||||| ||     
T  42699816 ggaggactcactttttgtttttaaattacgaacaatataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatcatattg 42699717  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacac 308  Q
    |||  | || ||| || ||   |||| ||||||| | |||||||||||  |||  ||||| || |||| ||||||| |||||| ||||||||    
T  42699716 ataattcaattttctaaaatttattttataatgtccataatttaaaaagaaaatataaactcttcccttctaaaccgtccatctaaacacac 42699625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 54996874 - 54996786
Alignment:
Q  125 ttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||||||| |||||||||||| || |||| | |||||| | |||||| ||| |||| ||||||||||||||||||||| |||||||||||    
T  54996874 ttacttttcttttttaaattacagattataaa-atgtttat-taaaatgaatgaagtgtgattgaagtattatatgatcatttatcatgtt 54996786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 2387939 - 2387995
Alignment:
Q  256 atttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||| ||| ||||||||||||||||||||| ||||| || ||||||||||||||||    
T  2387939 atttagaaaagaaaagtaaaccctcccctcccaaaccctcaatccaaacacaccctt 2387995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 24253970 - 24253894
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaaggaatgga-ggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||||| || |||||   ||||||||| | ||| ||||||||||||| ||||||||||||||||    
T  24253970 ttttagggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggac 24253894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 23027989 - 23028060
Alignment:
Q  145 acggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||||||||||| | ||||||||||||||||  ||| |||  ||||||||||||||||||| |||| ||||    
T  23027989 acggactatatacctatttttctaaaataaatatagtgtgagcgaagtattatatgatcgttgatcacgtta 23028060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 16884134 - 16884077
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||| ||| ||||||||||||||| |  |||||||||||||||||| |||||||||||    
T  16884134 atgtctttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 16884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 40858652 - 40858575
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||||| | | |||||||||||||||||  |||||| | ||||||| ||||| ||| || |||||||||||||||    
T  40858652 aaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcctagaccctcaatccaaacacaccct 40858575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 311
Target Start/End: Original strand, 42699769 - 42699846
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||| |||| ||| |||||||||||||||||  |||||| |  |||||||||||||||| || ||||||| |||||||    
T  42699769 aaaatattttatattgttcgtaatttaaaaacaaaaagtgagtcctcccctcctaaaccctcgatccaaaaacaccct 42699846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 49815490 - 49815433
Alignment:
Q  253 gtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccc 310  Q
    |||||||||||| ||||||||| ||||||||||| ||||| ||||||| |||| ||||    
T  49815490 gtaatttaaaaaagaaaagtaagccctcccctccaaaaccctccatcccaacataccc 49815433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 286
Target Start/End: Original strand, 26135878 - 26136006
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    ||||||||  |||||||||||||| |  |||||||||||||| ||  |||||||| ||  ||  | || |||  | |||  |||| ||||||| ||||||    
T  26135878 atgttttttaaaaataaattaagtgtttttgaagtattatataattatttatcatattgttaattcaattttcaaaaaattattttataatgtccgtaat 26135977  T
Q  258 ttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||| |||||||||||||||| ||||    
T  26135978 ttaaaaaagaaaagtaaaccctccactcc 26136006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 37237013 - 37237061
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    |||||||||||||| ||||||||||| || |||||| ||||||||||||    
T  37237013 aaaataaattaagtgtgattgaagtactaaatgatcatttatcatgtta 37237061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 45663330 - 45663250
Alignment:
Q  135 tttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||| |||||||||| ||||| |   |||| ||||||||||||  | |||||||||||||||| |||| |||||||||||    
T  45663330 tttttcaattacggacaatataaaatattttttaaaataaattatatgtgattgaagtattataagatcatttatcatgtt 45663250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 46556211 - 46556160
Alignment:
Q  253 gtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaac 304  Q
    |||||||||||| ||||| ||||| ||||||||||||||| || ||||||||    
T  46556211 gtaatttaaaaaagaaaattaaactctcccctcctaaaccctcaatccaaac 46556160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 25179979 - 25179905
Alignment:
Q  236 aacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccc 310  Q
    ||||||| ||| ||| | |||||||||||||||||||||  |||||||||| || || || ||||||||| ||||    
T  25179979 aacattttatagtgtccataatttaaaaatgaaaagtaagtcctcccctccaaagccctcaatccaaacaaaccc 25179905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 28582684 - 28582718
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||| |||||||||||||||||||||    
T  28582684 cgtaatttaaaaaagaaaagtaaaccctcccctcc 28582718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 31684365 - 31684399
Alignment:
Q  156 acatgtttttctaaaataaattaagtatgattgaa 190  Q
    |||||||||||||||||||||||||| ||||||||    
T  31684365 acatgtttttctaaaataaattaagtgtgattgaa 31684399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 44412445 - 44412499
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||| ||||||||||||||| |  |||||||||||||||||  |||||||||||    
T  44412445 tttttttaaaataaattaagtgtttttgaagtattatatgatgatttatcatgtt 44412499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 44412610 - 44412536
Alignment:
Q  74 gttttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacg 147  Q
    |||||| |||||||||||||||| |||||| |||||||| |||  |||||| | ||||||  |||||||||||||    
T  44412610 gttttaaggtgtgtttggattgatggtttgtgaggggaagggaggggaggactcacttttattttttaaattacg 44412536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 10943785 - 10943822
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  10943785 tgttcgtaatttaaaaattaaaagtgaaccctcccctc 10943822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 17474209 - 17474278
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaaggaatggagga-tttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||| |||||  ||||| ||| ||||||  | |||||||||| ||||||||||||||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggac 17474278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 34641202 - 34641235
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||| |||||||||||||||||||    
T  34641202 tcccctcctaaaccctccatccaaacacaccctt 34641235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 36727285 - 36727362
Alignment:
Q  186 ttgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaa 263  Q
    |||||||||||||||||  |||||||||||  || ||||| ||| |  |||  |||| ||||||||||||||||||||    
T  36727285 ttgaagtattatatgataatttatcatgttgttaagttaattttcttaaaattattttataatgttcgtaatttaaaa 36727362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 46978508 - 46978565
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||||||| ||||||||||||| | |  |||||||||||||| ||| |||||||||||    
T  46978508 atgtttttttaaaataaattaaatgtttttgaagtattatataatcatttatcatgtt 46978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 34641234 - 34641162
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||| || |||||  |||||||||| | || |||  ||||||||| ||||||||||||||||    
T  34641234 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggac 34641162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 54985770 - 54985706
Alignment:
Q  244 ataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacac 308  Q
    ||||||| ||||||||||||| ||||| ||| | ||| ||| ||||||| || ||||||||||||    
T  54985770 ataatgtccgtaatttaaaaacgaaaactaagctctctccttctaaaccctcaatccaaacacac 54985706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 55428619 - 55428551
Alignment:
Q  83 tgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggac 150  Q
    |||||||||||||| |||||  |||||||||| | || | |||||||||||| | ||||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggac 55428551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 4e-72; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 79 - 286
Target Start/End: Original strand, 13634711 - 13634920
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||||||||| | || ||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  13634711 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaat 13634810  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    || || |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |    
T  13634811 tatgtgtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaacc 13634910  T
Q  277 cctcccctcc 286  Q
    ||||||||||    
T  13634911 cctcccctcc 13634920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 26414893 - 26415103
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||| ||||| | || ||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  26414893 agggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 26414992  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||  |||| |||||||||||||||||||    
T  26414993 taagtgtgattgaagtattatatggtcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaagtaaac 26415092  T
Q  277 cctcccctcct 287  Q
     ||||||||||    
T  26415093 tctcccctcct 26415103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 75 - 312
Target Start/End: Complemental strand, 10072895 - 10072656
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaat 172  Q
    ||||||| |||||||| ||||| ||||| |||||| || | | | || |||||||||||| |||||||||||| |||  |||| ||||||||||||||||    
T  10072895 ttttaggatgtgtttgaattgatggtttaagagggaaaaggaggagaagatttacttttcttttttaaattaccgacggtataacatgtttttctaaaat 10072796  T
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |  ||  |||||||| |||||||||    
T  10072795 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatatttcatagtactcacaatttaaatatgaaaagt 10072696  T
Q  273 aaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  10072695 aaaccctcccctcttaaaccctccatccaaacacaccctt 10072656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 130 - 310
Target Start/End: Complemental strand, 36392341 - 36392162
Alignment:
Q  130 tttcgtttttaaattacggactatatacatgt-ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactt 228  Q
    ||||||||||||||||||||||||||| || | |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36392341 tttcgtttttaaattacggactatata-atatattttctaaaatagattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactt 36392243  T
Q  229 tttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccc 310  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||| || | ||||   || |||||||||||||||||    
T  36392242 tttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaaccttcac-tcctttcccctccatccaaacacaccc 36392162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 124 - 277
Target Start/End: Original strand, 37606941 - 37607094
Alignment:
Q  124 tttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt 223  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  37606941 tttacttttcgtttttaaattaaggactatataaatgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgtt 37607040  T
Q  224 aactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
    ||||||||||||||||||||||| | |  ||| |||||||||||||||||||||    
T  37607041 aactttttataaaacatttcatagtatctgtattttaaaaatgaaaagtaaacc 37607094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 79 - 284
Target Start/End: Original strand, 7544136 - 7544343
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  || ||||||| | || |||  | | ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  7544136 agggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaataaat 7544235  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
     |||| |||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||||||| ||| |||||||||||||||||||  ||||    
T  7544236 caagtgtgattgaagtattatatgattgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaac 7544335  T
Q  277 cctcccct 284  Q
    ||||||||    
T  7544336 cctcccct 7544343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 77 - 286
Target Start/End: Original strand, 16938477 - 16938688
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataa 174  Q
    |||||||||||||||||||| |||||  |||||||||| | || ||| |||  ||||| ||||||| |||||||||||||| ||||||| ||||||||||    
T  16938477 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataa 16938576  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    ||||||| |||||||| |||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||| |||  |||||||||||||||||  |||    
T  16938577 attaagtgtgattgaaatattatatgatcatttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaa 16938676  T
Q  275 accctcccctcc 286  Q
    ||||||||||||    
T  16938677 accctcccctcc 16938688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 76 - 281
Target Start/End: Complemental strand, 4373813 - 4373606
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaa-tggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||||||||||||||| |||||  || |||||   | ||||||||||||||||| |||||||||||||||||||||| || ||||||  ||||||    
T  4373813 tttagggtgtgtttggattgagggtttaggaagggaaaatagtggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaata 4373714  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| | |||| |||||| | ||| |||||||||||||| |||||||    
T  4373713 aattaagtgtgattgaaatattatatgatcatttatcatgttaatatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagta 4373614  T
Q  274 aaccctcc 281  Q
    ||| ||||    
T  4373613 aactctcc 4373606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 79 - 275
Target Start/End: Complemental strand, 28279721 - 28279522
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgttttt-ctaaaataaa 175  Q
    ||||||||||||||||||  || |   ||||||||| | | |||| |||||||||| ||||||||||| ||| |||||| ||||||||| ||||||||||    
T  28279721 agggtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaa 28279622  T
Q  176 ttaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa 275  Q
     ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  28279621 ctaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagtaaa 28279522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 124 - 277
Target Start/End: Original strand, 37779151 - 37779303
Alignment:
Q  124 tttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt 223  Q
    |||||||||||||||||||||| ||||||| || |||||||| ||||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  37779151 tttacttttcgtttttaaattaaggactat-taaatgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgtt 37779249  T
Q  224 aactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
    ||||||||||||||||||||||| | |  ||| |||||||||||||||||||||    
T  37779250 aactttttataaaacatttcatagtatctgtagtttaaaaatgaaaagtaaacc 37779303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 124 - 286
Target Start/End: Original strand, 37551454 - 37551614
Alignment:
Q  124 tttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt 223  Q
    |||||||||||||||||||||| |||||||||| | ||||||  ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  37551454 tttacttttcgtttttaaattatggactatataaaagttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgtt 37551553  T
Q  224 aactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||||||||||  | |||  ||| ||||||||||||||||||||| ||| ||||    
T  37551554 aactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccatcctctcc 37551614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 124 - 286
Target Start/End: Original strand, 37654284 - 37654444
Alignment:
Q  124 tttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt 223  Q
    |||||||||||||||||||||| |||||||||| | ||||||  ||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  37654284 tttacttttcgtttttaaattatggactatataaaagttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgtt 37654383  T
Q  224 aactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||||||||||  | |||  ||| ||||||||||||||||||||| ||| ||||    
T  37654384 aactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaagtaaaccatcctctcc 37654444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 124 - 269
Target Start/End: Original strand, 9856926 - 9857072
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||| ||||| ||||||||||| |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  9856926 tttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgatcgtttattatgttaatatgt 9857025  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaa 269  Q
    |||||||||| ||||||||||||| ||| ||||| ||||||||||||    
T  9857026 taactttttaaaaaacatttcatagtgtccgtaacttaaaaatgaaa 9857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 79 - 270
Target Start/End: Complemental strand, 20147114 - 20146917
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatatacatgtttttctaaaataaatta 178  Q
    |||||||||||||||||| |||||  ||||||||||    |||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  20147114 agggtgtgtttggattgagggtttaggaggggaagg----gagggtttacttttcatttttaaattacggattatatacatgtttttctaaaataaatta 20147019  T
Q  179 agtat----------gattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaa 268  Q
    ||| |          ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||    
T  20147018 agtgtaattaagtgtgattgaaatattatatgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaa 20146919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 307
Target Start/End: Complemental strand, 29002359 - 29002220
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatga 267  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||   |||  | ||||||||| ||| ||||| ||||||||||||||    
T  29002359 aaaataaattaaatatgattgtagtattatatgatcgtttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatga 29002260  T
Q  268 aaagtaaaccctcccctcctaaaccttccatccaaacaca 307  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  29002259 aaagtaaaccctcccctcctaaaccctccatccaaacaca 29002220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 125 - 289
Target Start/End: Complemental strand, 16501988 - 16501822
Alignment:
Q  125 ttacttttcgtttttaaattacggactatata-catgttttt-ctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    ||||||||  |||||||||||||||||||||| ||| ||||| ||||||||||| |||| ||||| |||| |||||||||| ||||| ||||||||||||    
T  16501988 ttacttttattttttaaattacggactatatatcatattttttctaaaataaatcaagtgtgattaaagttttatatgatcatttattatgttaatatgt 16501889  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaa 289  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||||| |||| || ||||||||||    
T  16501888 taacttttaaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaatccgcccctcctaa 16501822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 285
Target Start/End: Complemental strand, 17024389 - 17024260
Alignment:
Q  156 acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgta 255  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||||  | |    
T  17024389 acatgtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcataatgtctgca 17024290  T
Q  256 atttaaaaatgaaaagtaaaccctcccctc 285  Q
    |||||||||||||||||||| | |||||||    
T  17024289 atttaaaaatgaaaagtaaatcatcccctc 17024260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 79 - 286
Target Start/End: Original strand, 10476026 - 10476237
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaa-ttacggactata--tacatgtttttctaaaataa 174  Q
    |||||||||||| ||||| |||||  |||||||||| ||| |||| |||||||||| |||||||| |||| || ||||  ||||||||||||||||||||    
T  10476026 agggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaataa 10476125  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||||||   |||||   ||| |||||||| || ||||||||||||||| | ||||||    
T  10476126 attaagtgtgattgaagtattatataatcgtttatcatcttaatatgtttttttttttataaatatttcatagtggtcgtaatttaaaaattataagtaa 10476225  T
Q  275 accctcccctcc 286  Q
    || |||||||||    
T  10476226 acactcccctcc 10476237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 8503017 - 8502874
Alignment:
Q  140 aaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaac 238  Q
    ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| | || || |||||| ||||| ||||||||||||| ||||     
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaat 8502918  T
Q  239 atttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  8502917 atttcataatgtccgtaatttaaaaatgaaaagtgaaccctccc 8502874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 290
Target Start/End: Complemental strand, 2550592 - 2550383
Alignment:
Q  83 tgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaag 180  Q
    |||||||||||||| |||||  |||||||||| | || ||| |||||||||| |||||||  | ||||||||||| |||||||||||| ||||||||| |    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacg 2550493  T
Q  181 tatgattgaagtattatatgatcgtttatcatgttaatatgttaact-ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccct 279  Q
    | |||||||||||||||||||| |||||||||| || ||| |||| | ||| | ||||||| ||||| |||  |||||||||||||||||||||||||||    
T  2550492 tgtgattgaagtattatatgattgtttatcatg-tattattttaattgtttaaaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaaaccct 2550394  T
Q  280 cccctcctaaa 290  Q
    |||||||||||    
T  2550393 cccctcctaaa 2550383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 120 - 276
Target Start/End: Complemental strand, 9798814 - 9798657
Alignment:
Q  120 aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaat 218  Q
    |||||||||||||| |||| ||||||| || |||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||     
T  9798814 aggatttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaattgtgattgaagtattatatgatcgtttttcatgttaaa 9798715  T
Q  219 atgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    || || |||||||| |||||||||| || | | |||||||||||||||||||||||||    
T  9798714 atattgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaagtaaac 9798657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 22023483 - 22023603
Alignment:
Q  193 attatatgatcgtttatcatgttaatatgttaacttttt-ataaaacatttcataa-tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaa 290  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | | ||||||||| |||||||||||||||||||||||||||||    
T  22023483 attatatgatcgtttatcatgttaatatgttaacttttttaaaaaacatttcataaatatccgtaatttataaatgaaaagtaaaccctcccctcctaaa 22023582  T
Q  291 ccttccatccaaacacaccct 311  Q
    || ||||||||||||||||||    
T  22023583 ccctccatccaaacacaccct 22023603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 20513611 - 20513479
Alignment:
Q  159 tgtttttctaaaataaattaagtatgattgaagtattatat----gatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgt 254  Q
    ||||||| ||||||||||||||| |||||||||||||||||    |||||||||||||| |||||||||||||||||| ||||||||||||| |||  ||    
T  20513611 tgtttttataaaataaattaagtgtgattgaagtattatatatatgatcgtttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgt 20513512  T
Q  255 aatttaaaaatgaaaagtaaaccctcccctcct 287  Q
    | ||||||||||||||||||| ||| |||||||    
T  20513511 agtttaaaaatgaaaagtaaatccttccctcct 20513479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 84 - 286
Target Start/End: Original strand, 36363037 - 36363241
Alignment:
Q  84 gtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagt 181  Q
    ||||||||||||| |||||   ||||||| |||  ||||  |||| ||||| | |||||| |||| |||||||| |||||||||||||||||||| ||||    
T  36363037 gtgtttggattgagggtttagaaggggaatggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaagt 36363136  T
Q  182 atgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcc 281  Q
     | |||||||| |||||| || |||||||||| ||||||||||||||| || || |||||| ||| | | ||||||||||||||||||||| ||| |||     
T  36363137 gtcattgaagttttatatcattgtttatcatgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctct 36363236  T
Q  282 cctcc 286  Q
    |||||    
T  36363237 cctcc 36363241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 77 - 224
Target Start/End: Original strand, 11756876 - 11757024
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaa 175  Q
    ||||| |||||||||||||| |||||  ||||||| |||  ||||  |||  ||||  ||||||||||||| |||||||| ||||||| |||||||||||    
T  11756876 ttaggatgtgtttggattgagggtttaggaggggagggatgggagagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaa 11756975  T
Q  176 ttaagtatgattgaagtattatatgatcgtttatcatgttaatatgtta 224  Q
    |||||| ||||| ||||||||||||||| ||||| ||||||||||||||    
T  11756976 ttaagtgtgattaaagtattatatgatcatttatgatgttaatatgtta 11757024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 242
Target Start/End: Original strand, 42681450 - 42681618
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgttttta-----aattacggactatata-catgtttttctaaaata 173  Q
    |||||||||||||||| ||||| ||||||||| |||  |||||||||||||||  |||||      |||||||||||||||| |||||||||||||||||    
T  42681450 ggtgtgtttggattgagggtttaagaggggaaaggaggggaggatttactttttttttttttttttaattacggactatataacatgtttttctaaaata 42681549  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacattt 242  Q
    | || ||| ||||| ||||||||||||||| |||||||||||| ||| |||| |||||| |||| ||||    
T  42681550 attttagtgtgattaaagtattatatgatcatttatcatgttattattttaattttttaaaaaatattt 42681618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 82 - 284
Target Start/End: Original strand, 14681473 - 14681674
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaag 180  Q
    ||||||||||||||| |||||  ||||||||||||  || | || | ||||| |||||||||||| || |||||| ||||||||| |||||||||||||     
T  14681473 gtgtgtttggattgagggtttaggaggggaaggaagtgatggttaaattttcttttttaaattacagattatataacatgtttttttaaaataaattaaa 14681572  T
Q  181 tatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctc 280  Q
    | ||||||||| | |||||||  |||||||||||||||||  |||||||||| |||| |||| | |  ||| ||||||||||||| ||||| ||| ||||    
T  14681573 tgtgattgaaggaatatatgactgtttatcatgttaatat-ataacttttta-aaaatattttacagggtttgtaatttaaaaataaaaaggaaatcctc 14681670  T
Q  281 ccct 284  Q
    ||||    
T  14681671 ccct 14681674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 40815297 - 40815433
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaat 176  Q
    |||||||||||||||||||| |||  |||||||||| | | ||||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||     
T  40815297 agggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattacagactatataacatgtttttataaaataaa- 40815395  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgt 214  Q
     |||| |||||||| |||||||| || |||||||||||    
T  40815396 aaagtgtgattgaaatattatataattgtttatcatgt 40815433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 43497 - 43607
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatg-atcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaa-tttaaaaat 265  Q
    |||| ||||||||||||| |||||||||| ||| ||| ||||| |||||||||||||||||||| | |||| |||||||| ||||||||| |||||||||    
T  43497 aaaaaaaattaagtatgactgaagtattacatgtatcttttattatgttaatatgttaacttttcaaaaaatatttcatagtgttcgtaattttaaaaat 43596  T
Q  266 gaaaagtaaac 276  Q
    |||||||||||    
T  43597 gaaaagtaaac 43607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 81 - 286
Target Start/End: Original strand, 34980812 - 34981019
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaaggaatgga-ggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaatta 178  Q
    ||||||||||||||||||||||  |||||||||| | ||| || || ||||||  ||||||||||||| || |  || | | ||||| ||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaatta 34980911  T
Q  179 agtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccc 278  Q
    ||| |  |||||||||||||| ||| |||||||||||  ||  | || ||| |||||| ||||| ||||||| | ||||||||||| |||||||||  ||    
T  34980912 agtgtttttgaagtattatataatcatttatcatgttgttaactcaattttctataaatcattttataatgtccataatttaaaaaagaaaagtaagtcc 34981011  T
Q  279 tcccctcc 286  Q
    ||||||||    
T  34981012 tcccctcc 34981019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 118 - 276
Target Start/End: Original strand, 10650469 - 10650613
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    |||||||||||||||  ||||||||||||||||  ||| | |||||||||||||||||||||||| |||||||||               ||||||| ||    
T  10650469 ggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagtgtgattgaag---------------tatcatggta 10650553  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||  ||||||||||    
T  10650554 atatgttaactttttataaaacatttcatagtatccgtaatttaaaaacaaaaagtaaac 10650613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 14245204 - 14245123
Alignment:
Q  205 tttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||||||||||||||| || ||||||||||| | ||| ||||||||||||| |||||||||| ||||||||||    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcc 14245123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 1657955 - 1658022
Alignment:
Q  219 atgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||    
T  1657955 atgttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcc 1658022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 32727912 - 32727812
Alignment:
Q  186 ttgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    ||||| ||||| ||||||||||||||||||||||||||   |||||| |||| ||||||||||   |||||||||||||| ||| |||||| ||||||||    
T  32727912 ttgaattattacatgatcgtttatcatgttaatatgttcgttttttaaaaaatatttcataatacccgtaatttaaaaataaaatgtaaactctcccctc 32727813  T
Q  286 c 286  Q
    |    
T  32727812 c 32727812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 39966066 - 39965995
Alignment:
Q  240 tttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||||||||||| || ||| |||||||||||    
T  39966066 tttcataatgttcataatttaaaaataaaaagtaaactctcccctcctaaaccctctatctaaacacaccct 39965995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 185 - 307
Target Start/End: Complemental strand, 13839864 - 13839742
Alignment:
Q  185 attgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccct 284  Q
    |||||||||||||||||| || |||||||||| ||| | ||||||| | || |||||| ||| ||| | ||||||||||| ||||||||| | |||| ||    
T  13839864 attgaagtattatatgattgtctatcatgttattatttcaacttttcaaaatacattttatagtgtccataatttaaaaaagaaaagtaagctctcctct 13839765  T
Q  285 cctaaaccttccatccaaacaca 307  Q
    ||| |||| ||| ||||||||||    
T  13839764 cctcaaccctccgtccaaacaca 13839742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 286
Target Start/End: Complemental strand, 33744356 - 33744228
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    |||||||| ||||||||||||||| |  |||||| | ||||||||| |||||||||||  ||  | || |||  | ||| ||||| ||||||| | ||||    
T  33744356 atgtttttttaaaataaattaagtgtttttgaagaaatatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccataat 33744257  T
Q  258 ttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||| |||||||||||||||||||||    
T  33744256 ttaaaaaagaaaagtaaaccctcccctcc 33744228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 14245088 - 14245160
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggac 150  Q
    |||||||||||||||||| |||||  |||||||||| | || |||||||||||||| ||||||||||||||||    
T  14245088 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggac 14245160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 22022907 - 22022963
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaa 190  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  22022907 tttttaaattacggactatataacatatttttctaaaataaattaagtgtgattgaa 22022963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 9856947 - 9856889
Alignment:
Q  254 taatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||| ||||| ||||| ||||||||||||||| || ||||||||||||||||    
T  9856947 taatttaaaaaagaaaactaaactctcccctcctaaaccctcaatccaaacacaccctt 9856889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 11419377 - 11419303
Alignment:
Q  107 ggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaa 179  Q
    |||||||||||| |||  |||||||||| ||||||||||||||  |||||| |||||||||||||||||||||||    
T  11419377 ggggaaggaatgagagagtttacttttcttttttaaattacgggttatataacatgtttttctaaaataaattaa 11419303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 4423347 - 4423404
Alignment:
Q  213 gttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaa 270  Q
    ||||||||| ||| |||| | |||| ||||||||||||||||||||||||||||||||    
T  4423347 gttaatatgctaaattttaaaaaaatatttcataatgttcgtaatttaaaaatgaaaa 4423404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 20147050 - 20147115
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccc-----tcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||||||||||||||||     |||||||||||||| || ||||||||||||||||    
T  20147050 cgtaatttaaaaatgaaaagtaaaccctcccttcccctcctaaaccctcaatccaaacacaccctt 20147115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 27110120 - 27110220
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaa 268  Q
    ||||||||||||| ||||| || |||||||||||| ||||| || ||||| | |||| |||||| |||| |||| ||| | ||||||||||||||| |||    
T  27110120 aaataaattaagtgtgattaaaatattatatgatcatttattatattaatgttttaaattttta-aaaatattttatagtattcgtaatttaaaaaagaa 27110218  T
Q  269 aa 270  Q
    ||    
T  27110219 aa 27110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 10650516 - 10650464
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||    
T  10650516 aaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcc 10650464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 10650661 - 10650587
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatggagga--tttacttttcgtttttaaattacgga 149  Q
    |||||||||||||||||||||| ||||| |||||||||| | |||| |  ||||||||| ||||||||||||||||    
T  10650661 tttagggtgtgtttggattgaaagtttgggaggggaaggga-ggagaaagtttactttttgtttttaaattacgga 10650587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 11419302 - 11419232
Alignment:
Q  211 atgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcc 281  Q
    ||||||||||||| |||||||  ||||||||| ||| ||| | |||||| |||||||||||||||| ||||    
T  11419302 atgttaatatgtttacttttttaaaaacattttatattgtccttaatttgaaaatgaaaagtaaactctcc 11419232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 15986868 - 15986742
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaa-tggaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  ||||||||||||  |||||  | ||||||  ||||||||||||| || || | | |||| ||| ||||||||||    
T  15986868 agggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaataaat 15986769  T
Q  177 taagtatgattgaagtattatatgatc 203  Q
    ||||| |  || |||||||||||||||    
T  15986768 taagtgtttttaaagtattatatgatc 15986742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 33424965 - 33424911
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcat 212  Q
    |||||||| ||||||||||||| | ||||| ||||||||||||||| ||||||||    
T  33424965 atgtttttataaaataaattaaatctgattaaagtattatatgatcatttatcat 33424911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 311
Target Start/End: Complemental strand, 40305828 - 40305670
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    ||||||||  |||||||||||||  |  |||||||| ||||||||| |||||||| ||  ||  | || ||| || |||  |||| |||||||  |||||    
T  40305828 atgttttttcaaaataaattaagggtttttgaagtactatatgatcatttatcatattgttaattcaattttctaaaaattattttataatgtctgtaat 40305729  T
Q  258 ttaaaaatgaaaagtaaaccctccc-----ctcctaaaccttccatccaaacacaccct 311  Q
    ||||||| ||||| ||| |||||||     |||||||||| ||||||||||||||||||    
T  40305728 ttaaaaaagaaaactaagccctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 311
Target Start/End: Complemental strand, 8551660 - 8551427
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaaggaatggaggattt-acttttcgtttttaaattacggactatataca-tgtttttctaaaataaatta 178  Q
    ||||||||||||||||||||||  |||||||||  | || || | | ||||||  |||||||||||||  | || || | ||| |||  |||||||||||    
T  8551660 ggtgtgtttggattgaaggtttaggaggggaagagagggggggtctcacttttattttttaaattacgagcaatgtaaaatgtgttttaaaaataaatta 8551561  T
Q  179 agtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccc 278  Q
    ||| |  || ||||||||||||||| ||||| |||||  ||  |||| |||||| ||| ||||| |||||||  ||| ||||| ||  ||| ||||||||    
T  8551560 agtgtttttaaagtattatatgatcatttataatgttgttaatttaattttttaaaaatcattttataatgtctgtagtttaagaaataaatgtaaaccc 8551461  T
Q  279 -tcccctcctaaaccttccatccaaacacaccct 311  Q
     | ||||  |||||| || |||||||||||||||    
T  8551460 tttccctattaaaccctctatccaaacacaccct 8551427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 286
Target Start/End: Original strand, 10204576 - 10204785
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaat 176  Q
    ||||||||||||||| || |||||  |||||||||| | | ||||  | ||||||  ||||||||||||  || || || | ||| ||| ||||||||||    
T  10204576 agggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaataaat 10204675  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| |  |||||||||||||||||| ||||| | |||  ||  | || |||||| ||| |||||  ||||||  |||| ||||||| |||||||||      
T  10204676 taagtgtttttgaagtattatatgatcatttattacgttgttaattcaattttttaaaaatcattttttaatgtctgtaaattaaaaaagaaaagtaagt 10204775  T
Q  277 cctcccctcc 286  Q
    ||||||||||    
T  10204776 cctcccctcc 10204785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 274
Target Start/End: Original strand, 11436939 - 11437136
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaat-ggaggatttacttttcgtttttaaattacggactatatacatgtttt-tctaaaataaat 176  Q
    |||| ||||||||||||| |||||  |||||||||| |  |||||  ||||||| | |||||||||||||||| ||||| || |||| | ||   | ||     
T  11436939 agggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatatatatattttatttatttttaaa 11437038  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    |||   |||||||||||||||| |||| ||||||  | |  ||| |||| |||||| ||||||||| ||| ||||| || |||||||| |||||||||    
T  11437039 taaacgtgattgaagtattatacgatcatttatcgcgctgttattttaattttttaaaaaacattttatagtgttcctattttaaaaaagaaaagtaa 11437136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 17780340 - 17780279
Alignment:
Q  216 aatatgttaactttttataaaa-catttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||||||||||||||| |||| ||||| ||||| | |||||||||||| ||||||||||||    
T  17780340 aatatgttaactttttaaaaaaacattttataatatccgtaatttaaaactgaaaagtaaac 17780279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 1977622 - 1977670
Alignment:
Q  167 taaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||||| ||||| || ||||||||||||||||||||| |||||||||||    
T  1977622 taaaatcaattaggtttgattgaagtattatatgatcctttatcatgtt 1977670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 14245203 - 14245255
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||| | ||| |||||||||||||||||||  ||||||||||||||    
T  14245203 aaaacatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcc 14245255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 26414980 - 26414928
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||| |||||  || ||||||||||||| |||||||||||||||||||||    
T  26414980 aaaacatgtcatatagtccgtaatttaaaaacgaaaagtaaaccctcccctcc 26414928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 10043342 - 10043461
Alignment:
Q  167 taaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatg 266  Q
    ||||| ||||||||| |  |||||||||||||||||  ||||| |||||  ||  | || ||| || ||| ||||| ||||| ||||||||||||||| |    
T  10043342 taaaagaaattaagtgtttttgaagtattatatgattatttataatgttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaag 10043441  T
Q  267 aaaagtaaaccctcccctcc 286  Q
    |||||| |  ||||||||||    
T  10043442 aaaagtgagtcctcccctcc 10043461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 18855698 - 18855745
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||| |||||||| ||||| ||||||||||||||| |||||||||||    
T  18855698 aaaatgaattaagtttgatttaagtattatatgatcatttatcatgtt 18855745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 311
Target Start/End: Original strand, 19177267 - 19177330
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||| |||||| |||| ||||| ||||||||||||||| ||||| || ||||||||| |||||    
T  19177267 tgttcttaatttgaaaaagaaaactaaaccctcccctccaaaaccctcaatccaaacataccct 19177330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 43417 - 43483
Alignment:
Q  119 gaggatttacttttcgtttttaaattacggactatat-acatg-tttttctaaaataaattaagtat 183  Q
    |||||||||||| || ||||||||||| ||| ||||| ||||| ||||| |||||||||||||||||    
T  43417 gaggatttacttctcttttttaaattagggattatataacatgttttttttaaaataaattaagtat 43483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 1658055 - 1657985
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||| || |||||  |||||||||| | || ||| |||||||||| ||||||||||||||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggac 1657985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 14245292 - 14245218
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    |||||||||||||||||||| |||||  |||||||| |||  ||||| |||  ||||| ||||||||||||||||    
T  14245292 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggac 14245218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 39966139 - 39966061
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcat 212  Q
    ||||||||||||||| |||||| ||| ||||| | |||||||||||   |||||||| ||||||||||| |||| ||||    
T  39966139 tttttaaattacggattatataacatattttttttaaataaattaaacgtgattgaattattatatgattgtttttcat 39966061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 5688500 - 5688447
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcct 287  Q
    ||||||||| | | |||||||||||||||||  |||||| ||||||||||||||    
T  5688500 aaaacattttacattgttcgtaatttaaaaaataaaagtgaaccctcccctcct 5688447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 6597920 - 6597835
Alignment:
Q  191 gtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||||||||||| |||||||||||  ||| | || |||  | ||| ||||| | ||||| ||||||||||||| |||||||||||    
T  6597920 gtattatatgatcatttatcatgttgttatttcaattttcaaaaaatcattttacaatgtccgtaatttaaaaaagaaaagtaaac 6597835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 10476240 - 10476272
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||| ||||||||||||||||||    
T  10476240 tcccctcctaaaccctccatccaaacacaccct 10476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 13634954 - 13634886
Alignment:
Q  80 gggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacg 147  Q
    ||||||||||||||||| |||||  |||||||| |||  |||||  ||||||||| |||||||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacg 13634886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 2e-71; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 75 - 312
Target Start/End: Complemental strand, 21607092 - 21606853
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaag-ga-atggaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaa 171  Q
    |||||| ||||||||||||||| |||||  ||||||||| || ||| | | ||||| |||||||||||||||||  ||||||| | ||||||||||||||    
T  21607092 ttttagagtgtgtttggattgagggtttaggaggggaagagagatgaatg-tttacatttcgtttttaaattacaaactatattatatgtttttctaaaa 21606994  T
Q  172 taaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaag 271  Q
    ||||| |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||    
T  21606993 taaataaagtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaag 21606894  T
Q  272 taaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  21606893 taaaccctcccctcctaaaccctccatccaaacacaccctt 21606853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 77 - 312
Target Start/End: Original strand, 31849108 - 31849345
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataa 174  Q
    |||| ||||||| ||||||| ||||| ||||||||||| | || ||| |||| ||||| |||||||| ||| ||||||||| ||| ||||||||||||||    
T  31849108 ttagagtgtgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaataa 31849207  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    || |||| ||||||||||||||||| || |||||||| ||||||||||||| |||||| || |||||| ||| ||| ||||||||||||||||||||| |    
T  31849208 atcaagtgtgattgaagtattatattattgtttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagtga 31849307  T
Q  275 accctcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||||| |||  |||||| ||||||||||||    
T  31849308 accctcccctcctgaactctccatctaaacacaccctt 31849345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 77 - 274
Target Start/End: Complemental strand, 4097759 - 4097559
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgga-ggatttacttttcgtttttaaattacggactatata-catgttttt-ctaaaata 173  Q
    |||| ||||||||||||||| ||||| ||||||||||| | ||| || || ||||||| |||||||||||||||| ||||| ||| ||||| | ||||||    
T  4097759 ttagagtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaata 4097660  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||| |||||||    
T  4097659 aattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaagta 4097560  T
Q  274 a 274  Q
    |    
T  4097559 a 4097559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 124 - 287
Target Start/End: Original strand, 33235997 - 33236160
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||||||| |||||||||||||||||||    
T  33235997 tttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagactgattgaagaattatatgattgtttatcatgttaatatgt 33236096  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcct 287  Q
    |||||||||| |||| |||||||| ||| ||||||||||||||||||||||| | ||||||||||    
T  33236097 taacttttta-aaaaaatttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccctcct 33236160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 118 - 286
Target Start/End: Original strand, 1300659 - 1300829
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaa-ataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||| ||||||||  |||||||||||||||| |||||| ||| ||||| | || ||||||||||| |||||||||||||||||||| |||||||| |||    
T  1300659 ggagggtttactttatgtttttaaattacggattatataacatatttttttcaagataaattaagtgtgattgaagtattatatgattgtttatcaggtt 1300758  T
Q  216 aatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  1300759 aatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaagtaaaccctcccctcc 1300829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 286
Target Start/End: Complemental strand, 30487546 - 30487341
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaaggaa-tggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaa 179  Q
    |||||||| |||||| |||||  |||||||||| | |||||| |||| ||||  |||||||| ||||||||||||| ||||||||| |||||||||| ||    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaa 30487447  T
Q  180 gtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccct 279  Q
    || ||||||||||||||||| || |||||||||||||||||||| |||||||| || |||||||||| || || |||||||| |||||||||| ||||||    
T  30487446 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactg-tcctaatttaacaatgaaaagtgaaccct 30487348  T
Q  280 cccctcc 286  Q
    |||||||    
T  30487347 cccctcc 30487341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 80 - 286
Target Start/End: Complemental strand, 9719273 - 9719066
Alignment:
Q  80 gggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaatt 177  Q
    ||||||||||||||||| |||||  ||||||||| ||  || || |||| ||||| |||||||||| ||||||||||| |||| |||| |||| ||||||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatgctttt-taaattaaatt 9719175  T
Q  178 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
     ||| |||||||||||||||||||| ||||||||  ||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||||| |||| |    
T  9719174 tagtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatc 9719075  T
Q  278 ctcccctcc 286  Q
    |||||||||    
T  9719074 ctcccctcc 9719066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 138 - 270
Target Start/End: Complemental strand, 5585486 - 5585353
Alignment:
Q  138 ttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaa 236  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||| ||||||||| |||||||||||||| ||||||| |||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaa 5585387  T
Q  237 acatttcataatgttcgtaatttaaaaatgaaaa 270  Q
    |||||||||| ||||||||||||||||| |||||    
T  5585386 acatttcatagtgttcgtaatttaaaaaagaaaa 5585353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 14515473 - 14515715
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatatacatgtttttctaaaataaatt 177  Q
    |||||||||||||||||| |||||  |||||||||| | || ||| |||  ||||| |||||||||||||||||| ||| |||||| |||||||||||||    
T  14515473 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactagata-atgtttctctaaaataaatt 14515571  T
Q  178 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
    |||| ||| ||||||||||||| ||| ||||||||||| ||||||||||| || | |||| |||| ||| ||||| ||||||||||||||||  ||||||    
T  14515572 aagtgtgaatgaagtattatattatcatttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaaacc 14515671  T
Q  278 ctccc----------ctcctaaaccttccatccaaacacaccct 311  Q
    |||||          |||||||||| ||||||||||||||||||    
T  14515672 ctccctttccttcccctcctaaaccctccatccaaacacaccct 14515715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 79 - 275
Target Start/End: Original strand, 1390319 - 1390517
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgttt-ttctaaaataaa 175  Q
    ||||||||||||||| || |||||  ||||||||| | |  ||| ||||| ||||| |||| |||||||||||||| || ||||||| ||||||||||||    
T  1390319 agggtgtgtttggatggagggtttatgaggggaagagcagagagaatttaattttctttttaaaattacggactatgtaacatgtttattctaaaataaa 1390418  T
Q  176 ttaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa 275  Q
    |||||| |||||||| |||||| ||||| |||||||||||||||||||||||||||| |||| |||||||| |||  |||||||||||||||||||||||    
T  1390419 ttaagtttgattgaaatattat-tgatcatttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaa 1390517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 82 - 276
Target Start/End: Complemental strand, 19278278 - 19278079
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaa 179  Q
    |||||||||||||||  ||||  |||||||||| | || ||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| |    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaattta 19278180  T
Q  180 gtatgattgaagtattatatgatcgtttatcatgtta----atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa 275  Q
    || |||||||||||| |||||||||||||||||||||    |||||| ||||||||| |||| |||| ||| |||  |||||||||||||||||||||||    
T  19278179 gtctgattgaagtatcatatgatcgtttatcatgttaatatatatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaagtaaa 19278080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 124 - 286
Target Start/End: Complemental strand, 9721335 - 9721173
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||| ||||| |||||||||| ||||| ||||| ||||||||| |||| |||| | ||| |||||||||||||||||||| ||||||||  |||||||||    
T  9721335 tttaattttcttttttaaattccggaccatataacatgttttt-taaattaaagttagtgtgattgaagtattatatgattgtttatcaaattaatatgt 9721237  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||| |||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  9721236 taactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcc 9721173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 2900017 - 2900144
Alignment:
Q  184 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccc 283  Q
    |||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||   |||||||||||||||||||||| |||||||    
T  2900017 gattgatgtattatatgattgtttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaa-cctcccc 2900115  T
Q  284 tcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||| ||||||||| |||| ||||    
T  2900116 tcctaaaccctccatccaagcacatcctt 2900144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 82 - 309
Target Start/End: Original strand, 33041473 - 33041694
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaattaa 179  Q
    ||||||||||||||  |||||  ||| |||| |||  |||| ||||| ||||| |||||||||||  |||||||||   ||||||| |||||||||||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaattatagactatataatgtgtttttttaaaataaattaa 33041572  T
Q  180 gtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccct 279  Q
    || |||||||||| ||||        ||||||||||||||||||||||||||| ||||||||||||| | | |||||||||||||| |||| |||| | |    
T  33041573 gtgtgattgaagtgttat--------ttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaatctt 33041664  T
Q  280 cccctcctaaaccttccatccaaacacacc 309  Q
    |||||||||||| |||||||||||||||||    
T  33041665 cccctcctaaactttccatccaaacacacc 33041694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 10818322 - 10818425
Alignment:
Q  183 tgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  10818322 tgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccc 10818421  T
Q  283 ctcc 286  Q
    ||||    
T  10818422 ctcc 10818425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 118 - 307
Target Start/End: Complemental strand, 2892807 - 2892619
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    |||| ||||||||||| |||||||| ||||||||||||| || |||||||||||||||||| ||| |||||||| ||||||||||| |||||||||||||    
T  2892807 ggagaatttacttttcttttttaaactacggactatataacacgtttttctaaaataaatttagtgtgattgaaatattatatgattgtttatcatgtta 2892708  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacaca 307  Q
     ||| |||| |||||| |||| || ||||| ||| |||||||||| ||  |||||||||  || |||||| ||||||| ||||||||||||    
T  2892707 ttattttaa-tttttaaaaaatatctcatagtgtgcgtaatttaacaacaaaaagtaaattcttccctcccaaacctt-catccaaacaca 2892619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 140 - 276
Target Start/End: Original strand, 34176397 - 34176534
Alignment:
Q  140 aaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaac 238  Q
    |||||||||| |||||| |||||||||||||||||||| |||| |||||| ||||||||| |||||||||| |||||||||||||||||||  | ||||     
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaat 34176496  T
Q  239 atttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    |||||||| ||| ||||||||||||||||||| |||||    
T  34176497 atttcatagtgtccgtaatttaaaaatgaaaactaaac 34176534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 79 - 285
Target Start/End: Complemental strand, 16738239 - 16738032
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataaatt 177  Q
    ||||| |||||||||||| |||||  || ||||||||  ||||  |||||||||| |||||||||||| || |||||| | ||||||||||||||||| |    
T  16738239 agggtttgtttggattgagggtttaggatgggaaggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaagt 16738140  T
Q  178 aagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaacc 277  Q
    |||| | ||| ||||||||||||||||| |||||||||| ||| |||| || | | ||||||||||||| | | | ||||||||||| |||||||||| |    
T  16738139 aagtgttatttaagtattatatgatcgtatatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaatc 16738040  T
Q  278 ctcccctc 285  Q
     |||||||    
T  16738039 ttcccctc 16738032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 312
Target Start/End: Complemental strand, 30850153 - 30849923
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatatac-atgtttttctaaaataaattaa 179  Q
    ||||||||||||||| |||||  ||||| ||| ||| ||||  |||||||||   |||||||||| | | ||||||  |||||||| ||||| ||||| |    
T  30850153 gtgtgtttggattgagggtttaggagggaaagagaagggagagtttacttttttattttaaattatgaattatataatatgtttttttaaaacaaattta 30850054  T
Q  180 gtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccct 279  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||  ||||| |||| |||| ||| | | ||||||||||||| |||| ||||| |||    
T  30850053 gtataattgaagtattatatgatcgtttatcatgttattattttaa--ttttaaaaaatattttatagtatgcgtaatttaaaaacgaaatgtaaatcct 30849956  T
Q  280 cccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||| ||||| | |||||| ||| ||||||    
T  30849955 cccctcccaaacccttcatccatacataccctt 30849923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 13583777 - 13583888
Alignment:
Q  136 ttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttata 234  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||| ||||||| |||||| |    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaa 13583876  T
Q  235 aaacatttcata 246  Q
    ||||||||||||    
T  13583877 aaacatttcata 13583888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 135 - 269
Target Start/End: Complemental strand, 10348986 - 10348850
Alignment:
Q  135 tttttaaattacggactatata-catgtttttct-aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttta 232  Q
    |||||||||||||||||||||| ||||||||| | ||||||| | ||||  |||||||||||||||| |||||||||| | |||||||||||||||||||    
T  10348986 tttttaaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaacttttta 10348887  T
Q  233 taaaacatttcataatgttcgtaatttaaaaatgaaa 269  Q
     || | |||||||| | | ||||||||||||||||||    
T  10348886 aaagatatttcatattatccgtaatttaaaaatgaaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 665995 - 665876
Alignment:
Q  167 taaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt-aactttttataaaacatttcataatgttcgtaatttaaaaat 265  Q
    ||||| ||||||||| || |||||||||||||| ||| ||||||||||||||||||| || |||||| || |||||||||||| ||| ||||||||||||    
T  665995 taaaaaaaattaagtgtggttgaagtattatatcatcatttatcatgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaat 665896  T
Q  266 gaaaagtaaaccctcccctc 285  Q
    ||||| | ||||||||||||    
T  665895 gaaaaatgaaccctcccctc 665876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 275
Target Start/End: Original strand, 1395692 - 1395834
Alignment:
Q  135 tttttaaattacggactatata-catgtttttc-taaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttta 232  Q
    ||||| ||||||||||||| || |||||||||  ||||||||||||||| |||||||| || || |||||| ||||||||| ||||||||||| ||||||    
T  1395692 ttttttaattacggactatgtaacatgttttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaatttttta 1395791  T
Q  233 taaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa 275  Q
     ||||||||  | | |||| |||||||||||||||||||||||    
T  1395792 aaaaacattctacagtgttagtaatttaaaaatgaaaagtaaa 1395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 2893626 - 2893752
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaat 172  Q
    ||||| |||||||||||||||| |||||| || |||||  ||  ||||  ||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  2893626 ttttaaggtgtgtttggattgagggtttgggaagggaaatgagcggagagtttacttttcgtttttaaactacagactatataacatgtttttctaaaat 2893725  T
Q  173 aaattaagtatgattgaagtattatat 199  Q
    ||||||||| ||||||| |||||||||    
T  2893726 aaattaagtgtgattgatgtattatat 2893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 274
Target Start/End: Complemental strand, 2893050 - 2892890
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatataca---tgtttttctaaaataaatta-agtatgattgaagtattatatgatcgtttatcatg 213  Q
    ||||| |||||||||| ||||||||||||| |||||||| |   | ||||| ||||  || ||| ||| |||||||||||||||||||||||||||||||    
T  2893050 ggagggtttacttttcttttttaaattacgaactatataaaatatatttttttaaataaatttatagtgtgattgaagtattatatgatcgtttatcatg 2892951  T
Q  214 ttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    ||| ||| |||  || ||| |||| |||||||| ||| |||||||||||||  ||||||||    
T  2892950 ttattattttactttcttacaaaatatttcatagtgtgcgtaatttaaaaacaaaaagtaa 2892890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 217
Target Start/End: Complemental strand, 12811226 - 12811085
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatatac-atgtttttctaaaataa 174  Q
    |||||||||||||||||||| |||||  || |||||| ||  |||||  ||||||||| | |||||||||  |||||||||  |||||||||||||||||    
T  12811226 ttagggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataa 12811127  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaa 217  Q
    ||||||| |||||||||||  ||||||| ||||||||||||||    
T  12811126 attaagtgtgattgaagta-gatatgattgtttatcatgttaa 12811085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 9298625 - 9298695
Alignment:
Q  217 atatgttaactttttataaaa-catttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  9298625 atatgttaactttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaaccctcccctcc 9298695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 25741476 - 25741562
Alignment:
Q  147 ggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttta 232  Q
    |||||||||| ||||||||| ||||||||||||||  ||| |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  25741476 ggactatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattattatgttaacttttta 25741562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 308
Target Start/End: Complemental strand, 7776046 - 7775959
Alignment:
Q  222 ttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt-aaaccctcccctcctaaaccttccatccaaacacac 308  Q
    ||||||||||| |||| |||| ||| |||||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||||||||    
T  7776046 ttaactttttaaaaaatattttatagtgttcgtaattttaaaatgaaaagtgaaaccttcccctccaaaaccctccatccaaacacac 7775959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 6034275 - 6034201
Alignment:
Q  119 gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagt 192  Q
    ||||||||||||||| |||||||||| | |||| |||| ||||||||||||||||||||||||| ||||||||||    
T  6034275 gaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattgaagt 6034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 1300688 - 1300629
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||   ||||||||||||||||||||||||| || |||||||||||||||    
T  1300688 cgtaatttaaaaacataaagtaaaccctcccctcctaaaccctcaatccaaacacaccct 1300629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 32926737 - 32926784
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  32926737 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 32926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 25468564 - 25468438
Alignment:
Q  156 acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgta 255  Q
    |||||||||| ||||||||||||||| |  |||||||||||||| ||| ||||||| |||  ||  |||| ||| |  |||  |||| ||||||| | ||    
T  25468564 acatgtttttttaaaataaattaagtgtttttgaagtattatataatcatttatcacgttgttaaattaattttcttaaaattattttataatgtccata 25468465  T
Q  256 atttaaaaatgaaaagtaaaccctccc 282  Q
    ||||||||| |||||||||| ||||||    
T  25468464 atttaaaaaagaaaagtaaaacctccc 25468438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 9721138 - 9721210
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||||||||||  |||||||| |||  ||||| |||| ||||| ||||||||||||||||    
T  9721138 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 9721210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 25747418 - 25747489
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttta 232  Q
    ||||| |||||| ||||||   ||| |||||| ||||||||||||||||||||||| ||| |||||||||||    
T  25747418 tttttttaaaatcaattaaacgtgactgaagttttatatgatcgtttatcatgttattatattaacttttta 25747489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 14548793 - 14548711
Alignment:
Q  135 tttttaaattacggactatataca-tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    |||||||||||||||| ||||| | |||| || ||||||||||||| | ||||||||  ||||||||||| ||||| ||||||    
T  14548793 tttttaaattacggacaatataaaatgttattttaaaataaattaactgtgattgaaccattatatgatcatttataatgtta 14548711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 9719034 - 9719103
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||| |||||  |||||||||| | || |||||||| ||||| ||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggac 9719103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 26318386 - 26318443
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||||||| ||||||||||||||| |  ||||||||||||||||||  ||||||||||    
T  26318386 atgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgtt 26318443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 29490548 - 29490475
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatt 241  Q
    ||||| |||||||  ||||| ||||||||||||||  |||||| |||||||| |||||||||||| || |||||    
T  29490548 aaaatcaattaagcgtgatttaagtattatatgatattttatcttgttaatacgttaactttttaaaatacatt 29490475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 33955499 - 33955559
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacac 308  Q
    ||||||||||||||||| |||||||||| | | | ||| ||||||||||||| ||||||||    
T  33955499 tgttcgtaatttaaaaacgaaaagtaaatcatactctcataaaccttccatctaaacacac 33955559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 16737997 - 16738063
Alignment:
Q  80 gggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaatta 145  Q
    |||||||||||||| || ||||| |||| ||||| ||  ||| ||||||||||||||||||||||||    
T  16737997 gggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaatta 16738063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 17155446 - 17155495
Alignment:
Q  167 taaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    |||||| |||||||| ||||| |||||||||||||||  |||||||||||    
T  17155446 taaaatcaattaagtgtgatttaagtattatatgatcagttatcatgtta 17155495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 23091027 - 23090994
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||||||||| ||||||||||||||||    
T  23091027 tcccctcctaaaccttcaatccaaacacaccctt 23090994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 2893018 - 2893050
Alignment:
Q  249 gttcgtaatttaaaaatgaaaagtaaaccctcc 281  Q
    |||||||||||||||| ||||||||||||||||    
T  2893018 gttcgtaatttaaaaaagaaaagtaaaccctcc 2893050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 3841330 - 3841258
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaa-tggaggatttacttttcgtttttaaattacggac 150  Q
    |||||||||||||||  | |||||  ||||||||| || |||| || ||||||||| ||||||||||||||||    
T  3841330 agggtgtgtttggatgaagggtttaggaggggaagaaaatggaagacttacttttcttttttaaattacggac 3841258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 2e-68; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 77 - 286
Target Start/End: Original strand, 30010330 - 30010541
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataa 174  Q
    |||||||||||||||||||| |||||  |||||||||| | || |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  30010330 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataa 30010429  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    ||||||| || |||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| || ||| |||||||| ||||||||||||||    
T  30010430 attaagtgtggttgaagtattatatgatcgtttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaa 30010529  T
Q  275 accctcccctcc 286  Q
    ||||||||||||    
T  30010530 accctcccctcc 30010541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 79 - 284
Target Start/End: Complemental strand, 40095178 - 40094970
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa--ggaatggaggatttacttttcgtttttaaattacggactatata-catgttttt-ctaaaataa 174  Q
    |||||||||||||||||| ||||| ||| || ||  |||| | ||| ||||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  40095178 agggtgtgtttggattgagggttt-agaaggaaaagggaaggaagggtttacttttcgtttttaaattacagactatataacatgttttttctaaaataa 40095080  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  40095079 attaagtgtgattgaagtattatatgatcgtttatcatgttaatttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaa 40094980  T
Q  275 accctcccct 284  Q
    ||||||||||    
T  40094979 accctcccct 40094970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 75 - 278
Target Start/End: Complemental strand, 32951566 - 32951361
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaaggaatggagga-tttacttttcgtttttaaattacggactatata-catgtttttctaaaat 172  Q
    ||||||||||||||||||||||  ||||  ||| |||||| | ||  || ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  32951566 ttttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaat 32951467  T
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  32951466 aaattaagtgtgattgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaagt 32951367  T
Q  273 aaaccc 278  Q
    | ||||    
T  32951366 ataccc 32951361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 79 - 286
Target Start/End: Original strand, 41498404 - 41498613
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  ||||||||| ||  ||||| |||||||||||||||||||||| | ||||| || |||| |||||||  |||| |    
T  41498404 agggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataagt 41498503  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||     
T  41498504 taagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaat 41498603  T
Q  277 cctcccctcc 286  Q
    ||||||||||    
T  41498604 cctcccctcc 41498613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 76 - 283
Target Start/End: Complemental strand, 35349709 - 35349502
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||||||||||||| | |||||  |||||||||| | || ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  35349709 tttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaata 35349610  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    || ||||  | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||||||||    
T  35349609 aactaagggttattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttc--agtgtccgtaatttaaaaatgaaaagta 35349512  T
Q  274 aaccctcccc 283  Q
    ||||||||||    
T  35349511 aaccctcccc 35349502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 118 - 307
Target Start/End: Original strand, 10391912 - 10392108
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||    
T  10391912 ggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataaattaattgtgattaaagtattatatgaccgtttatcatgtta 10392011  T
Q  217 atatgttaacttttt-ataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac-----cctcccctcctaaaccttccatccaaacaca 307  Q
    ||||||||||||||| | ||||||||| |||||||| |||||||||||| |||||||||||     |||||||||||||||| ||||||||||||||    
T  10392012 atatgttaactttttaaaaaaacatttaataatgtttgtaatttaaaaacgaaaagtaaactctctcctcccctcctaaaccctccatccaaacaca 10392108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 86 - 286
Target Start/End: Complemental strand, 2859169 - 2858967
Alignment:
Q  86 gtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtat 183  Q
    |||||||||||||||||  |||||||||| | || ||| |||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||| |    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgt 2859070  T
Q  184 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccc 283  Q
    ||||||||||||||||||| |||||| |||| | ||||||||||||||| | |||||||||||  ||  |||||||| ||||||||||||||||||||||    
T  2859069 gattgaagtattatatgattgtttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaaccctcccc 2858970  T
Q  284 tcc 286  Q
    |||    
T  2858969 tcc 2858967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 118 - 276
Target Start/End: Original strand, 8529839 - 8529998
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||||||||| ||||||||||||  |||||||| ||||||||| | ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  8529839 ggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattatatgatcgtttaccatgtta 8529938  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    |||||||||||||||| |||| |||||||| ||| |||||||||||||||||||||||||    
T  8529939 atatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaac 8529998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 82 - 286
Target Start/End: Complemental strand, 38510135 - 38509929
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaa 179  Q
    ||||||||||||| | |||||  |||||||||| | || ||| |||| ||||| |||||||| ||||||||||||| |||||||||||||||||||| ||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaa 38510036  T
Q  180 gtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccct 279  Q
    || ||||||||||||||||| |||||||||| |||||| ||||||| |||||| || |||||||||| ||| ||||||||||||||||||||| ||||||    
T  38510035 gtgtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccct 38509936  T
Q  280 cccctcc 286  Q
    || ||||    
T  38509935 cctctcc 38509929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 79 - 286
Target Start/End: Original strand, 12234010 - 12234219
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||||||||| | || |||  ||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  12234010 agggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataaat 12234109  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
     |||| ||||||| |||| |||||||| | ||| ||||||||||| ||||||| || |||||||||| || ||| ||||||||||||||||||| |||||    
T  12234110 caagtgtgattgatgtataatatgatcatatattatgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaac 12234209  T
Q  277 cctcccctcc 286  Q
    ||||||||||    
T  12234210 cctcccctcc 12234219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 124 - 275
Target Start/End: Original strand, 51597714 - 51597866
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  51597714 tttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgattgtttatcatcttaatatgt 51597813  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa 275  Q
    |||||||||| ||| ||||||||| ||||| |||||||||| |||||||||||    
T  51597814 taactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagtaaa 51597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 129 - 269
Target Start/End: Complemental strand, 50744474 - 50744332
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| |||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50744474 ttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 50744375  T
Q  228 -ttttataaaacatttcataatgttcgtaatttaaaaatgaaa 269  Q
     ||| | ||||||||||||| ||| ||||||||||||||||||    
T  50744374 ctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 50744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 44211105 - 44210925
Alignment:
Q  122 gatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatat 220  Q
    ||||||| |||| ||| |||||||| | ||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||    
T  44211105 gatttacatttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttgttat 44211006  T
Q  221 gttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaa 303  Q
     |||| |||||| | ||||||||||   || | ||||||||||| |||||||||||||||||||| |||| | ||||||||||    
T  44211005 tttaattttttagagaacatttcat--ggtccataatttaaaaacgaaaagtaaaccctcccctcttaaatcctccatccaaa 44210925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 156 - 278
Target Start/End: Complemental strand, 36285739 - 36285617
Alignment:
Q  156 acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgta 255  Q
    |||||||||| ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||    
T  36285739 acatgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcgta 36285640  T
Q  256 atttaaaaatgaaaagtaaaccc 278  Q
    |||||||||||| || |||||||    
T  36285639 atttaaaaatgataaataaaccc 36285617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 285
Target Start/End: Original strand, 7444574 - 7444703
Alignment:
Q  156 acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgta 255  Q
    ||||||||||||||| ||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| ||| ||| ||||    
T  7444574 acatgtttttctaaattaaaccaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaatcattttatagtgtccgta 7444673  T
Q  256 atttaaaaatgaaaagtaaaccctcccctc 285  Q
    |||| |||||||||| ||||||||||||||    
T  7444674 attttaaaatgaaaactaaaccctcccctc 7444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 280
Target Start/End: Complemental strand, 49946828 - 49946629
Alignment:
Q  83 tgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaag 180  Q
    |||||||||||||| || ||  | |||||||| ||| |||| |||||||||| | ||||||  |  ||||||||| ||||||||| |||||||||||||     
T  49946828 tgtgtttggattgagggattaggcggggaagggatgtgagggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataaattaaa 49946729  T
Q  181 tatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctc 280  Q
    | ||||||||||||||||||||  |||||||||||||||||||||||||| | |||| |||| ||| ||| |||||||||||||||| || |||||||||    
T  49946728 tgtgattgaagtattatatgataatttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaaccctc 49946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 267
Target Start/End: Complemental strand, 45585883 - 45585739
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| | || ||||||||||||||||| ||||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  45585883 tttacttttcctcttaaaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatgt 45585784  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatga 267  Q
    |||||||| | ||||||||| ||| | |   ||||||||||||||    
T  45585783 taacttttaaaaaaacattttatagtatctataatttaaaaatga 45585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 161 - 285
Target Start/End: Original strand, 41676363 - 41676489
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactt--tttataaaacatttcataatgttcgtaatt 258  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||     | ||||||||| ||| ||| |||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatt 41676462  T
Q  259 taaaaatgaaaagtaaaccctcccctc 285  Q
    |||||||||||||||||||||||||||    
T  41676463 taaaaatgaaaagtaaaccctcccctc 41676489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 280
Target Start/End: Original strand, 6563628 - 6563779
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| ||||||||| || ||||||||| ||||| |||||||||||||||| || | |||||| |||||||||||| |||||||||||||||| ||||||    
T  6563628 ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcatgttaatatattaact 6563726  T
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctc 280  Q
    | ||| |||| | |||||| ||| |   |||||||||||||||||||||||||    
T  6563727 tcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaaccctc 6563779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 282
Target Start/End: Complemental strand, 26941036 - 26940882
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| |||||||| |||||| | |||| |||||||||||||||||||| |||| |||||||||||||||||||  |||||  ||||||||| |||||||    
T  26941036 ttttcttttttaaaatacggattctataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgactgtttacgatgttaataagttaact 26940937  T
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    ||| |  ||| |||||||| |||   |||||||||||| |||||| |||||||||    
T  26940936 tttaaacaaatatttcatagtgtctataatttaaaaataaaaagtgaaccctccc 26940882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 20576270 - 20576168
Alignment:
Q  182 atgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcc 281  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||  | ||| ||||||||||||||||||  ||||| ||||    
T  20576270 atgattgaagtattatatgatcgtttatcatgttaatatattaactctttaaaaaacatttc--agtgtccgtaatttaaaaatgaaatctaaactctcc 20576173  T
Q  282 cctcc 286  Q
    |||||    
T  20576172 cctcc 20576168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 309
Target Start/End: Original strand, 33643266 - 33643499
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaagg-aatggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataa 174  Q
    ||||||||||||| ||||||||||||  |||||||||| || ||| || | ||||||  ||||||||||||| |  || || | ||||||| ||||||||    
T  33643266 ttagggtgtgtttagattgaaggtttaggaggggaagggaagggatgactcacttttattttttaaattacgaaaaatgtaaaatgtttttttaaaataa 33643365  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    ||||||| |  |||||||||||||||||| || ||||| ||| ||  | || ||| || ||| ||||| | ||||||| ||||||||||| | ||| |||    
T  33643366 attaagtgtttttgaagtattatatgatcattcatcatattattaattcaattttctaaaaatcattttaaaatgttcataatttaaaaaag-aaattaa 33643464  T
Q  275 accctcccctcctaaaccttccatccaaacacacc 309  Q
    |  ||||||||||||||| || |||||||||||||    
T  33643465 attctcccctcctaaaccctctatccaaacacacc 33643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 28770852 - 28770965
Alignment:
Q  206 ttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctc----------ccctcctaaaccttc 295  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||| |||| |||||||||          |||||||||||||||    
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcataatgt--gtaatttaaaaataaaaaataaaccctccactccttttccctcctaaaccttc 28770949  T
Q  296 catccaaacacaccct 311  Q
    ||||||||||||||||    
T  28770950 catccaaacacaccct 28770965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 42230617 - 42230703
Alignment:
Q  156 acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacattt 242  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||| |||||| |||||||||| |||||||| || |||||||||    
T  42230617 acatgttttttaaaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattttaactttataaaaaacattt 42230703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 43552109 - 43552037
Alignment:
Q  204 gtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctc 280  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||| |||||||||    
T  43552109 gtttatcatgttaatatgttaactttttaaaaaacatttcataa----cgtaatttaaaaatgaaaaataaaccctc 43552037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 311
Target Start/End: Original strand, 49832545 - 49832778
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaataa 174  Q
    ||||||||  |||||||| |||||||  ||||||||| ||  ||||   ||||||||| |||||||||||| ||  ||||| | |||||||  |||||||    
T  49832545 ttagggtgcatttggattcaaggtttaggaggggaagtgagaggagagcttacttttcttttttaaattacagataatataaagtgttttttaaaaataa 49832644  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaa--catttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    | ||||| ||||||||||||||||| ||   ||||||||||| ||| | || |||||  ||||  |||||  || |||||  |||||||||| | ||| |    
T  49832645 aataagtgtgattgaagtattatatcat---ttatcatgttattatttcaattttttggaaaaatcattt--tagtgttcacaatttaaaaaaggaaaat 49832739  T
Q  273 aaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||| |||||||||||| | ||||||||||||||||||    
T  49832740 aaaccttcccctcctaaatcctccatccaaacacaccct 49832778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 76 - 286
Target Start/End: Complemental strand, 1085737 - 1085524
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaata 173  Q
    |||||||||||||||||| || |||||  |||||||||| | | || || | ||||||  ||||||||||||| || || || | ||||||| |||||||    
T  1085737 tttagggtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaata 1085638  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattt-aaaaatgaaaagt 272  Q
    |||||||| |  |||||||||||||||||| ||||||||| |  ||  | || ||| || ||| |||||  |||||| |||||||| ||||| |||||||    
T  1085637 aattaagtgtttttgaagtattatatgatcatttatcatgctgttagttcaattttctaaaaatcattttctaatgtccgtaatttaaaaaaggaaaagt 1085538  T
Q  273 aaaccctcccctcc 286  Q
    ||  ||||||||||    
T  1085537 aagtcctcccctcc 1085524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 215
Target Start/End: Original strand, 35927814 - 35927951
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatatacatgtttttctaaaataaatt 177  Q
    |||||||||||||||||| | |||  |||||||| |||  |||||  | || |||  ||||||||||| | || || || || |||||||||||||||||    
T  35927814 agggtgtgtttggattgaggttttaggaggggaatggaggggagggctcacatttattttttaaattatgaacaatgtaaatatttttctaaaataaatt 35927913  T
Q  178 aagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||||  |||||||||||||||||| |||||||||||    
T  35927914 aagtatttttgaagtattatatgatcatttatcatgtt 35927951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 8529867 - 8529809
Alignment:
Q  253 gtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||||    
T  8529867 gtaatttaaaaaagaaaagtaaaccctcccctcctaaaccctcaatccaaacgcaccct 8529809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 312
Target Start/End: Original strand, 47071132 - 47071286
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    ||||||||  ||||||| |||||| |  ||||| |||| ||||||| |||||||||||  ||  | || ||| || ||| ||||| ||||||| ||||||    
T  47071132 atgttttttcaaaataagttaagtgtttttgaaatattttatgatcatttatcatgttgttaattaaattttctaaaaatcattttataatgtccgtaat 47071231  T
Q  258 ttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||| ||||||| |  | |||| ||||||||| | |||||||||||||||||    
T  47071232 ttaaaaaagaaaagttagtcttcccttcctaaacccttcatccaaacacaccctt 47071286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 25268345 - 25268472
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    |||| ||| ||||||||||||||| |  |||||||||||||||||| ||||||| |||  |   | || ||| || ||| ||||| ||||| | ||||||    
T  25268345 atgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcacgttgttgattaaattttctaaaaatcattttataatttccgtaat 25268444  T
Q  258 ttaaaaatgaaaagtaaaccctcccctc 285  Q
    ||||||| | ||||||||||||||||||    
T  25268445 ttaaaaaaggaaagtaaaccctcccctc 25268472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 40709290 - 40709361
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacg 147  Q
    |||||||||||||||||| ||||||| ||||||||| |||  |||||| ||||||||| |||||||||||||    
T  40709290 ttagggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacg 40709361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 311
Target Start/End: Complemental strand, 2470933 - 2470730
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaag----tattatatgatcgtttatcatgttaat 218  Q
    |||||||||| |||||||||||   |||||||| ||||||||||||||||| | ||| | |||||||||    ||||||||||  |||||||||||||||    
T  2470933 tttacttttcttttttaaattatcaactatataacatgtttttctaaaatacactaattgtgattgaaggaagtattatatgactgtttatcatgttaat 2470834  T
Q  219 atgttaacttttt-----ataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccc----------tcccctcctaaaccttccatccaaa 303  Q
    |||    | ||||     | ||||||||| ||| ||||||||||||||||||| |||  ||||||          |||||||||||||| ||||||||||    
T  2470833 atg----cattttaaaaaaaaaaacattttatagtgttcgtaatttaaaaatgtaaacgaaaccctccattctcttcccctcctaaaccctccatccaaa 2470738  T
Q  304 cacaccct 311  Q
    ||||||||    
T  2470737 cacaccct 2470730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 2470912 - 2470966
Alignment:
Q  254 taatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacac 308  Q
    ||||||||||| |||||||||||| |||||||||||||| || ||||||||||||    
T  2470912 taatttaaaaaagaaaagtaaaccttcccctcctaaaccatcaatccaaacacac 2470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 40094931 - 40095005
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||| || |||||  |||||||||||| || ||| |||||||||| ||||||||||||||||    
T  40094931 ttagggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggac 40095005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 52707726 - 52707842
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaa--catttcataatgttcgta 255  Q
    ||||||||  ||||||||||| ||||  |||||||||||||| ||| |||||||||||  ||  |||| |||||| ||||   |||| |||||||| |||    
T  52707726 atgttttttaaaaataaattatgtatttttgaagtattatatcatcatttatcatgttgtta--ttaaatttttaaaaaaattatttgataatgttggta 52707823  T
Q  256 atttaaaaatgaaaagtaa 274  Q
    ||||||||| |||||||||    
T  52707824 atttaaaaaagaaaagtaa 52707842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 7444476 - 7444555
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaagg-aatggaggatttacttttcgtttttaaattacggactatat 155  Q
    |||| ||||||| ||||||| |||||| |||| ||||| || ||||| |||||||||| |||||||||||||||| ||||    
T  7444476 ttagagtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacggaccatat 7444555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 1344717 - 1344783
Alignment:
Q  246 aatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||| ||||||||||||| ||||| ||||   |||||||||||||| |||||||||||||| ||||    
T  1344717 aatgtccgtaatttaaaaaagaaaaataaattttcccctcctaaaccctccatccaaacacatcctt 1344783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 51303544 - 51303490
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    ||||| ||||||||||||||| |  |||||||||||||||||| |||||||||||    
T  51303544 tttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 51303490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 10391941 - 10391908
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    ||||||||||||||||||||||||||||||||||    
T  10391941 cgtaatttaaaaatgaaaagtaaaccctcccctc 10391908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 286
Target Start/End: Original strand, 35512909 - 35513006
Alignment:
Q  189 aagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||||| |||||||||||  ||  | || ||| || ||| ||||| ||||||| | |||||||||||  |||||||| |||||||||||    
T  35512909 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataatttaaaaaataaaagtaagccctcccctcc 35513006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 43553130 - 43553049
Alignment:
Q  123 atttacttttcgtttttaaatt-acggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgat 202  Q
    ||||||||||| |||||||||| ||||| |||||| | ||||| ||||||||||||||||| | | |||| |||||||||||    
T  43553130 atttacttttcatttttaaatttacggattatataacttgtttctctaaaataaattaagtgttactgaaatattatatgat 43553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 232634 - 232677
Alignment:
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaa 217  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  232634 aattaagtataattaaagtattatatgatcggttatcatgttaa 232677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 525259 - 525208
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcat 212  Q
    ||||| ||||||||||||||| || |||||||||||||| ||| ||||||||    
T  525259 tttttttaaaataaattaagtttgtttgaagtattatataatcatttatcat 525208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 311
Target Start/End: Original strand, 26941018 - 26941077
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||| |||||||| ||||| | |||| |||||||||||||| || |||||||||||||||    
T  26941018 cgtattttaaaaaagaaaattgaaccttcccctcctaaaccctcaatccaaacacaccct 26941077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 35349466 - 35349536
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||| || ||||| |||||||| ||   ||||| |||||||||| ||||||||||||||||    
T  35349466 agggtgtgtttggatggagggtttaagaggggaggggg-ggagggtttacttttcatttttaaattacggac 35349536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 38509891 - 38509966
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    |||||||||||||||||| || |||||  |||||||| |||  ||||| || ||||||| ||||||||||||||||    
T  38509891 tttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggac 38509966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 50744456 - 50744511
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacaca 307  Q
    ||||||||||||| |||||  |||||||||||||||||||| || |||||| ||||    
T  50744456 cgtaatttaaaaaagaaaaacaaaccctcccctcctaaaccctcaatccaagcaca 50744511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 51582072 - 51582119
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||||||||| ||| |||||||||||||| |||||| |||||||||||    
T  51582072 aaaataaattcagtgtgattgaagtattacatgatcatttatcatgtt 51582119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 35349637 - 35349671
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||| |||||||||||||||||||||    
T  35349637 cgtaatttaaaaacgaaaagtaaaccctcccctcc 35349671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 50079547 - 50079493
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcat 212  Q
    |||||||| ||||||||||||||| |  || ||||||||||||||| ||||||||    
T  50079547 atgtttttttaaaataaattaagtgtttttaaagtattatatgatcatttatcat 50079493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 1738118 - 1738175
Alignment:
Q  254 taatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||||||| ||||||||| |||||||  |||||||| |||||| ||||| |||||    
T  1738118 taatttaaaaaggaaaagtaagccctcccaccctaaaccctccatcgaaacataccct 1738175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 2506626 - 2506553
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacaca 307  Q
    ||||||||| ||| || |||||||||||||   |||| | ||||||||||| ||||||| || |||||||||||    
T  2506626 aaaacattttatattggtcgtaatttaaaagataaaaatgaaccctccccttctaaaccctcaatccaaacaca 2506553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 20607429 - 20607462
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||| |||||||||||||||||||    
T  20607429 tcccctcctaaaccctccatccaaacacaccctt 20607462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 27739136 - 27739189
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||| |||||| |||||||| |||||||||||||  |||||| |||||||||||    
T  27739136 ttttttaaaatcaattaagtgtgattgaagtatttaatgatcatttatcatgtt 27739189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 41498652 - 41498576
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaa--ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    |||||||||||||||||| ||  ||||  |||||| |  |||  |||||||||||||||| ||||||||||||||||    
T  41498652 tttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggac 41498576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 42742469 - 42742416
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||| ||||||||||||||| ||||||||||| |||||||   |||||||||||    
T  42742469 ttttttaaaataaattaagtgtgattgaagtactatatgactatttatcatgtt 42742416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 2470727 - 2470799
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacg 147  Q
    |||||||||||||||||| || |||||  ||||||||| ||||||||| |||  ||| | |||||||||||||    
T  2470727 tttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacg 2470799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 286
Target Start/End: Original strand, 20607311 - 20607426
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaa 268  Q
    ||||||||||||| |  |||||||||||||||||  | ||||||||||||   |||| |||  | ||| ||||| ||||||| | ||||| |||||  ||    
T  20607311 aaataaattaagtgtttttgaagtattatatgataatatatcatgttaat---ttaattttcaaaaaatcattttataatgtccataattaaaaaaaaaa 20607407  T
Q  269 a-agtaaaccctcccctcc 286  Q
    | |||||||||||||||||    
T  20607408 atagtaaaccctcccctcc 20607426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 28770969 - 28770897
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggg-gaaggaatggaggatttacttttcgtttttaaattac 146  Q
    ||||||||||||||||||| ||||||||  |||||  ||||| |||||| |||| ||||  ||||||||||||    
T  28770969 ttttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac 28770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 40287430 - 40287490
Alignment:
Q  249 gttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacacc 309  Q
    ||||||| ||||||||  |||||| | | ||||||||||||| | ||||||||||||||||    
T  40287430 gttcgtagtttaaaaaataaaagtgagctctcccctcctaaatcctccatccaaacacacc 40287490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 41498476 - 41498440
Alignment:
Q  249 gttcgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  41498476 gttcataatttaaaaacgaaaagtaaaccctcccctc 41498440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 51303419 - 51303383
Alignment:
Q  276 ccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||||||||| || ||||||||||||||||    
T  51303419 ccctcccctcctaaaccctcaatccaaacacaccctt 51303383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 1e-66; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 75 - 281
Target Start/End: Complemental strand, 33655356 - 33655148
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaat 172  Q
    |||||| ||||||||||||||| |||||  |||||||||  | | |||| |||||||||| ||||||||||| || ||||||| ||||||||||||||||    
T  33655356 ttttagagtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaat 33655257  T
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  33655256 aaattaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 33655157  T
Q  273 aaaccctcc 281  Q
    |||||||||    
T  33655156 aaaccctcc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 125 - 312
Target Start/End: Original strand, 17852918 - 17853105
Alignment:
Q  125 ttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt 223  Q
    ||||||||| ||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  ||| ||    
T  17852918 ttacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattatatgatcgtttatcatgttgttatttt 17853017  T
Q  224 aactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    | ||||||| ||||| ||||||| || |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  17853018 atcttttta-aaaacttttcatagtgctcgtaatttaaaaatgaaaagtaagccctcccctcctaaaccctccatccaaacacaccctt 17853105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 124 - 285
Target Start/End: Complemental strand, 34235206 - 34235043
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgttttt-ctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatg 221  Q
    |||||||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  34235206 tttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatattaatatg 34235107  T
Q  222 ttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  34235106 ttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaattctcccctc 34235043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 124 - 286
Target Start/End: Complemental strand, 40196730 - 40196567
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||    
T  40196730 tttactttttgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcaggttgatatgt 40196631  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||||||||||||| ||| ||| ||||||| |||||||||||||||||||||| ||||    
T  40196630 taactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctcc 40196567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 118 - 286
Target Start/End: Complemental strand, 41497161 - 41496992
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  41497161 ggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcatttatcatgtta 41497062  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||| |||||| |||||||||| || ||| |||||||||||||| ||||||||| | ||||||||    
T  41497061 atatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatcatcccctcc 41496992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 79 - 285
Target Start/End: Complemental strand, 1051742 - 1051536
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||||||||| | | ||||||||| ||||| ||||||||||||| |||||||| | ||||||||||||||||||    
T  1051742 agggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaaaataaat 1051643  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||||  ||| |||||||||||||||||| || |||    
T  1051642 taagtgtgattgaagcattatatgattgtttatcatg-taatatgttaactttttaaaaaacatttcat-gtgtccgtaatttaaaaatgaaatgttaac 1051545  T
Q  277 cctcccctc 285  Q
    |||||||||    
T  1051544 cctcccctc 1051536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 77 - 286
Target Start/End: Original strand, 25887190 - 25887402
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataa 174  Q
    |||||||||||||||||||| |||||  |||||||||| | || |||||||  ||||| ||| ||||| |||||||||||| ||||||||||||||||||    
T  25887190 ttagggtgtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaataa 25887289  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttt-tataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    ||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||  | |||||||||||| || |||||||||||||||||||| |||    
T  25887290 attaagtgtgattggagtattatatgattgtttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgta 25887389  T
Q  274 aaccctcccctcc 286  Q
    ||| |||||||||    
T  25887390 aactctcccctcc 25887402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 77 - 309
Target Start/End: Complemental strand, 34228565 - 34228330
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacgga-ctatata-catgtttttctaaaata 173  Q
    |||||||||||||| |||||||||||  |||| ||||| | || |||||||||||||| |||| |||||||||| ||||||| |||||||||||||||||    
T  34228565 ttagggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaata 34228466  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact-ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    |||||||| |||||||||||||||||||| | ||||||| |||||||||||||| |||||||||||| |||||| ||| |||||||  |||||| |||||    
T  34228465 aattaagtgtgattgaagtattatatgattgcttatcatattaatatgttaacttttttataaaaca-ttcatagtgtccgtaattacaaaatgtaaagt 34228367  T
Q  273 aaaccctcccctcctaaaccttccatccaaacacacc 309  Q
    ||| | |||||||| ||| | ||||| ||||||||||    
T  34228366 aaatcttcccctcccaaatcctccattcaaacacacc 34228330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 129 - 287
Target Start/End: Complemental strand, 24970358 - 24970199
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  24970358 ttttcttttttaaattatggattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcaagttaatatgttaact 24970259  T
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcct 287  Q
    ||||| |||| |||||||| | | |||||||||||||||||||||||| | |||||||||    
T  24970258 ttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaatcatcccctcct 24970199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 77 - 284
Target Start/End: Original strand, 43230234 - 43230442
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataa 174  Q
    |||| ||||||||||||||  ||||| |||| | |||||| || ||| |||||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  43230234 ttagtgtgtgtttggattgggggtttaagagagaaaggaaggggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataa 43230333  T
Q  175 attaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    |||||||  |||||||| |||||| ||||||||||||||||||||||||||||||| | |||| | |||| | ||| |||||||||||||| ||||||||    
T  43230334 attaagtgcgattgaagaattatacgatcgtttatcatgttaatatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaa 43230432  T
Q  275 accctcccct 284  Q
    || |||||||    
T  43230433 actctcccct 43230442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 76 - 286
Target Start/End: Original strand, 47390852 - 47391065
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaa-tggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||||||||||||||| || ||  |||||||||| | |||||| |||||||||| ||||||||||| | |||||||| |||||||||||||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaata 47390951  T
Q  174 aattaagtatgattgaagtattatatga-tcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
     ||||| | ||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||||  ||| ||| ||| |||||||||||||||||||      
T  47390952 cattaattgtgattgaagtattatatgacttgtttatcatgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaacc 47391051  T
Q  273 aaaccctcccctcc 286  Q
    |||| |||||||||    
T  47391052 aaactctcccctcc 47391065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 286
Target Start/End: Complemental strand, 13771190 - 13770983
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    ||||||||||| |||||| |||||  |||||||||| | | |||  ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  13771190 agggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataaat 13771091  T
Q  177 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| |||||  ||| |||||| || ||||||||||||||||||||||||||||||  || |||| ||| ||| |||||||||||||| | |||||||     
T  13771090 taagtgtgattcgagtgttatatcattgtttatcatgttaatatgttaactttttat--aatattttatagtgtccgtaatttaaaaataataagtaaat 13770993  T
Q  277 cctcccctcc 286  Q
    ||||||||||    
T  13770992 cctcccctcc 13770983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 4833685 - 4833566
Alignment:
Q  167 taaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatg 266  Q
    ||||||||||||| | ||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||||||    
T  4833685 taaaataaattaaatgtgatttaagtattatatgattgtttatcatgttaataggttaactttttataaaacatttcatagtgtctgtaatttaaaaatg 4833586  T
Q  267 aaaagtaaaccctcccctcc 286  Q
    ||||||||||||||||||||    
T  4833585 aaaagtaaaccctcccctcc 4833566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 286
Target Start/End: Original strand, 18231693 - 18231795
Alignment:
Q  184 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccc 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  18231693 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccc 18231792  T
Q  284 tcc 286  Q
    |||    
T  18231793 tcc 18231795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 37417831 - 37417708
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| ||| ||| |||||| |||||||||||||||||||||||||||||||| |||||||    
T  37417831 tttacttttcatttttaaataacggactatataacatgtttttcaaaattaagttaagtgtgattgaagtattatatgatcgtttatcatgtgaatatgt 37417732  T
Q  223 taactttttataaaacatttcata 246  Q
    |||||||||| |||||||||||||    
T  37417731 taactttttagaaaacatttcata 37417708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 81 - 309
Target Start/End: Complemental strand, 40572475 - 40572247
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaaggaatggaggatttacttttcgtttttaaattacggactatatac-atgtttttctaaaataaattaa 179  Q
    |||||||||||||||| ||||| ||||||||| ||| | |   |||  ||||  |||| |||||||||||||||||  |||||| |||||||||||||||    
T  40572475 ggtgtgtttggattgagggtttaagaggggaaagaaagaaaagtttgtttttatttttaaaattacggactatataatatgtttctctaaaataaattaa 40572376  T
Q  180 gtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccct 279  Q
    |  ||||| ||||||||||||| | |||||||||||||||||||||| ||||| |||| |||| |||   | ||||||||||||||||||  ||||| ||    
T  40572375 gcgtgattaaagtattatatgaccttttatcatgttaatatgttaac-ttttaaaaaatattttatagcatccgtaatttaaaaatgaaatctaaactct 40572277  T
Q  280 cccctcctaaaccttccatccaaacacacc 309  Q
    ||||| ||||| | ||||||||||||||||    
T  40572276 ccccttctaaatcctccatccaaacacacc 40572247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 22163272 - 22163167
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||| ||| ||||||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaat 22163174  T
Q  258 ttaaaaa 264  Q
    |||||||    
T  22163173 ttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 22221980 - 22221875
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaat 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||| ||| ||||||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaat 22221882  T
Q  258 ttaaaaa 264  Q
    |||||||    
T  22221881 ttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 41008188 - 41008422
Alignment:
Q  85 tgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttct-aaaataaattaagt 181  Q
    |||||||||||| ||||||||||||||||| | || || ||||  ||||| |||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  41008188 tgtttggattgagggtttgagaggggaagggaggggagaatttgtttttcttttttaaattacggactatataacatgttttttttaaaataaattaagt 41008287  T
Q  182 atgattgaagtattatatgatcgtttatcatgttaatatgttaacttttta--taaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa---- 275  Q
     ||||||||||  |||||||| ||||||||||||||||||||||||||| |    ||| |  ||||| | | |||||||||||||||||| |||||        
T  41008288 gtgattgaagt--tatatgattgtttatcatgttaatatgttaacttttgaagacaaaaaaatcatagtatccgtaatttaaaaatgaaatgtaaactct 41008385  T
Q  276 -ccctcccctcctaaaccttccatccaaacacaccct 311  Q
     || |||||||||||||| | ||||||||||||||||    
T  41008386 tccttcccctcctaaaccctgcatccaaacacaccct 41008422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 129 - 285
Target Start/End: Original strand, 42306385 - 42306538
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| |||||||||||| ||||||||| ||||| ||||||||||||||||||  |||||| |||||||||||    ||||| | ||||||||| |||||    
T  42306385 ttttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattatatg----tttatgaggttaatatgctaact 42306480  T
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||| |||||| |||||||    
T  42306481 ttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctc 42306538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 39856109 - 39855975
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||||||||| | || ||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  39856109 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaat 39856010  T
Q  177 taagtatgattgaagtattatatgatcgtttatca 211  Q
    ||||| ||| | ||||||||||||||| |||||||    
T  39856009 taagtgtgacttaagtattatatgatcatttatca 39855975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 163 - 312
Target Start/End: Original strand, 10315719 - 10315878
Alignment:
Q  163 tttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaa 262  Q
    |||||||||||||   ||| ||||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||||||||| ||| |||| ||||||    
T  10315719 tttctaaaataaacccagtgtgattgaagtattatataatcgtttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaa 10315818  T
Q  263 aatgaaaagtaaa----------ccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||| ||||          || |||||||||||||||||||||||||||| |||||    
T  10315819 aatgaaaaataaatcaccctctcccttcccctcctaaaccttccatccaaacacgccctt 10315878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 161 - 311
Target Start/End: Complemental strand, 23116420 - 23116269
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaaca-tttcataatgttcgtaattt 259  Q
    ||||| ||||| ||||||||| ||||||||||||||||| ||| |||||||||||  ||| | || ||||||  ||||| ||| ||| |||  |||||||    
T  23116420 tttttttaaaaaaaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaattt 23116321  T
Q  260 aaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  23116320 aaaaaagaaaagtaagccctcccttcctaaaccctccatccaaacacaccct 23116269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 309
Target Start/End: Complemental strand, 32872939 - 32872788
Alignment:
Q  163 tttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaa 262  Q
    ||||||||||||||||||| | ||||||  || ||||||  ||||||||||||||||||||||||||||| |||  |||| ||||| |||||||||||||    
T  32872939 tttctaaaataaattaagtttaattgaaagatgatatgagtgtttatcatgttaatatgttaactttttaaaaagtattttataatattcgtaatttaaa 32872840  T
Q  263 aatgaaaagtaaaccc-----tcccctcctaaaccttccatccaaacacacc 309  Q
    || ||||||||||| |     |||||||||||||| | |||| |||||||||    
T  32872839 aaagaaaagtaaactctcctttcccctcctaaacccttcatctaaacacacc 32872788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 311
Target Start/End: Original strand, 48093977 - 48094127
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaattta 260  Q
    ||||| ||||||||||||||| || || ||||||||||||||| |||||||| ||| ||| | || | | || |||| |||| |||  ||||||||||||    
T  48093977 tttttttaaaataaattaagtgtggttaaagtattatatgatcatttatcattttattatttcaattctataaaaaagattttatagcgttcgtaattta 48094076  T
Q  261 aaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||| |||||||||| |||||||||||||| | | ||||||||||||||||    
T  48094077 aaaaagaaaagtaaatcctcccctcctaaatcctacatccaaacacaccct 48094127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 143 - 276
Target Start/End: Complemental strand, 45940835 - 45940701
Alignment:
Q  143 ttacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatt 241  Q
    |||| ||||||||| ||| ||||||||||||||||||| | | ||||||||||||||| |||| |||| ||||||||||  || |||| || ||||||||    
T  45940835 ttacagactatataacatatttttctaaaataaattaaatgtaattgaagtattatattatcgcttattatgttaatatactatctttgtaaaaaacatt 45940736  T
Q  242 tcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    ||||| ||| |||||| ||||||| ||||||||||    
T  45940735 tcatagtgtccgtaatataaaaataaaaagtaaac 45940701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 220
Target Start/End: Complemental strand, 31571713 - 31571569
Alignment:
Q  80 gggtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catg-tttttctaaaataa-a 175  Q
    ||||||||||||||||| |||||  ||||||||| ||  ||||  |||||||||| |||||||||||||||| ||||| |||| ||||| ||||| || |    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaaaaata 31571614  T
Q  176 ttaagtatgattgaagtattatatgatcgtttatcatgttaatat 220  Q
    |||||| ||||||||||||||||| || |||||||||||||||||    
T  31571613 ttaagtgtgattgaagtattatataattgtttatcatgttaatat 31571569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 124 - 270
Target Start/End: Original strand, 42087041 - 42087188
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||| ||||| |||| |||||||| | |||||| ||| || || ||||||||||||||| | |||||| |||||||| ||||||| ||| |||||||||     
T  42087041 tttatttttctttttaaaattacgaattatataacatattattttaaaataaattaagtgtaattgaattattatataatcgtttgtcacgttaatatgc 42087140  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaa 270  Q
    |||||||||| ||||| ||  |||||   |||||||||||||||||||    
T  42087141 taactttttaaaaaactttgtataatacccgtaatttaaaaatgaaaa 42087188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 26365763 - 26365916
Alignment:
Q  75 ttttagggtgtgtttggattgaaggtttgagaggggaa--ggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaa 171  Q
    |||||| ||||||||||||||| |||||  |||||| |  ||| | |||  |||||||||| |||||| |||||  |||||||| ||| |||||||||||    
T  26365763 ttttagagtgtgtttggattgagggtttaggagggggaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaaaa 26365862  T
Q  172 taaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaa 225  Q
    |||| || || |||||||||||||||||||| |||| |||||||| ||| ||||    
T  26365863 taaactaggtgtgattgaagtattatatgattgtttctcatgttattattttaa 26365916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 13425273 - 13425164
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatga 267  Q
    |||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||| |||||| | |||| ||||  || |||  ||||||||||||| |    
T  13425273 aaaataaattaagtgtgaatgaagtataatatgattgtttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaatttaaaaataa 13425174  T
Q  268 aaagtaaacc 277  Q
    ||| ||||||    
T  13425173 aaaataaacc 13425164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 286
Target Start/End: Original strand, 33519105 - 33519257
Alignment:
Q  135 tttttaaattacggactatataca-tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttat 233  Q
    ||||||||||||| || ||||| | ||||||| | ||||||||||||| |  |||||||||||||||||| |||||||||||  ||  | || ||| ||     
T  33519105 tttttaaattacgaacaatataaaatgtttttttgaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaa 33519204  T
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||| ||||| |||||||  |||||||||| | ||||||||| |||||||||||    
T  33519205 aaatcattttataatgtctgtaatttaaagaagaaaagtaatccctcccctcc 33519257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 18063800 - 18063667
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaaggaa-tggaggatttact--tttcgtttttaaattacggactatatacatgtttttctaaaataaatt 177  Q
    ||||||||||||| || ||||| | ||||||||| | ||||||| |||||  |||| ||||||||||| |||  |||||    ||||| |||||||||||    
T  18063800 ggtgtgtttggat-gatggtttaaaaggggaagggagtggaggaattactcttttcttttttaaattatggataatataa---tttttttaaaataaatt 18063705  T
Q  178 aagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  18063704 aagtgtgattgaagtattatatgatcatttatcatgtt 18063667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 37417812 - 37417868
Alignment:
Q  256 atttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||||||||||| |||||||||||||| || ||||||||||||||||    
T  37417812 atttaaaaatgaaaagtaaaccatcccctcctaaaccctcaatccaaacacaccctt 37417868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 286
Target Start/End: Original strand, 37620776 - 37620983
Alignment:
Q  81 ggtgtgtttggattgaaggtttgagaggggaaggaatggaggattt-acttttcgtttttaaattacggactatataca-tgtttttctaaaataaatta 178  Q
    |||||||||||||||| |||||| |||||||||| | ||  || || ||||||  |||| |||||| | || || || | || |||| ||||||||||||    
T  37620776 ggtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgattttttaaaataaatta 37620875  T
Q  179 agtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccc 278  Q
    | | |  |||||||||||||| ||| ||||||||||| |||  | || |||  | ||| ||||| ||||||| | ||||||||||| |||||| ||||||    
T  37620876 aatgtttttgaagtattatataatcttttatcatgttgataattcaattttccaaaaatcattttataatgtccataatttaaaaaagaaaagcaaaccc 37620975  T
Q  279 tcccctcc 286  Q
    ||||||||    
T  37620976 tcccctcc 37620983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 225
Target Start/End: Original strand, 48152030 - 48152127
Alignment:
Q  124 tttacttttcgtttttaaattacggactatatacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgtt 223  Q
    ||||| |||| ||||||||||||||  |||| |||||||||||||||||||||| ||| |||||||||||||| |||||| ||||| |||||| ||| ||    
T  48152030 tttacctttcttttttaaattacgg--tata-acatgtttttctaaaataaatttagtgtgattgaagtatta-atgatcatttattatgttagtatttt 48152125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 10315679 - 10315623
Alignment:
Q  255 aatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||| |||||||||| |||||||||||||| |||| |||||||||||||||    
T  10315679 aatttaaaaaagaaaagtaaatcctcccctcctaaatcttcaatccaaacacaccct 10315623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 48881730 - 48881794
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||| ||||||||||||| |||||| |||| |||||||||||||| || ||||||||||||||||    
T  48881730 tgtttgtaatttaaaaattaaaagtgaaccttcccctcctaaaccctcaatccaaacacaccctt 48881794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 17852940 - 17852881
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||||||||| ||||||||| ||||||||||||||||| || ||| |||||||||||    
T  17852940 cgtaatttaaaaaagaaaagtaatccctcccctcctaaaccctcaatctaaacacaccct 17852881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 233
Target Start/End: Complemental strand, 23029537 - 23029428
Alignment:
Q  119 gaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaa 217  Q
    |||| |||||||||| |||||||||||  |||||||| |||||||||||||||||||   | ||   |||||| |||||||| |  ||||||||||||||    
T  23029537 gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataa---aggt---attgaaatattatataactgtttatcatgttaa 23029444  T
Q  218 tatgttaactttttat 233  Q
    ||||||||| ||||||    
T  23029443 tatgttaacattttat 23029428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 38378095 - 38378205
Alignment:
Q  128 cttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaac 226  Q
    |||||| |||||||| |||| |||||||| |||||||||  ||||||||| || | | ||||| ||||||||||||||||||| ||||     |||||||    
T  38378095 cttttcttttttaaactacgaactatataacatgttttttaaaaataaatcaattgtaattgaggtattatatgatcgtttattatgt-----tgttaac 38378189  T
Q  227 tttttataaaacattt 242  Q
    |||||| |||||||||    
T  38378190 tttttaaaaaacattt 38378205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 312
Target Start/End: Original strand, 48013583 - 48013738
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtatt-atatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaa 256  Q
    |||||||| ||||||||||||||| |  |||||  ||| |||||||| |||||||||||  ||  | || ||| || |||  |||| |||| ||  || |    
T  48013583 atgtttttttaaaataaattaagtgtttttgaaaaattcatatgatcatttatcatgttgttaattcaattttctaaaaattattttataaagtctgtga 48013682  T
Q  257 tttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||| ||||||||| | |||||||||||| || |||||||||||||||||||    
T  48013683 tttaaaaacgaaaagtaagctctcccctcctaatccctccatccaaacacaccctt 48013738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 20393693 - 20393763
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaaca 239  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||| ||| | || |||| ||||||||    
T  20393693 aaataaattaagtgtgattgaagtattatatgatcatttataatgttactatttcaagttttcataaaaca 20393763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 308
Target Start/End: Original strand, 21857432 - 21857577
Alignment:
Q  162 ttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaa 261  Q
    |||| ||||||||||||||| |  ||||| |||| ||||||| |||||||||||  ||  | || ||| || ||| ||||| ||||||||||||| ||||    
T  21857432 ttttttaaaataaattaagtgtttttgaaatattgtatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaa-ttaa 21857530  T
Q  262 aaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacac 308  Q
    ||  |||||||||  |||| ||||||||||  ||||| |||||||||    
T  21857531 aagagaaaagtaagtcctctcctcctaaacactccattcaaacacac 21857577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 30891147 - 30891034
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaa---acatttcataatgttcgtaatttaaaaat 265  Q
    ||||||||||| | ||||||||||||||||| ||||||||| || ||||||| |||| |||| | |||   | |||| ||| ||| ||||||||||||||    
T  30891147 aaataaattaaatgtgattgaagtattatattatcgtttattatattaatat-ttaa-ttttaaaaaatatatattttatagtgtccgtaatttaaaaat 30891050  T
Q  266 gaaaagtaaaccctcc 281  Q
    ||||||||||| ||||    
T  30891049 gaaaagtaaactctcc 30891034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 307
Target Start/End: Original strand, 39646466 - 39646699
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatataca-tgtttttctaaaata 173  Q
    ||||||||||||||||||||| |||||  ||| |||||| | || |||| | ||||||  ||||||||||| | || || || | | | ||| |||||||    
T  39646466 tttagggtgtgtttggattgacggtttaggagaggaagggaggggaggaatcacttttattttttaaattatgaacaatgtaaaatatatttttaaaata 39646565  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||||| | |  |||||||||||||| ||| |  ||||||||  ||  | || ||| || ||| ||||| ||||||| |||||||||||||  ||||||     
T  39646566 aattaactgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaataaaagtg 39646665  T
Q  274 aaccctcccctcctaaaccttccatccaaacaca 307  Q
    |  | |||||||||||||| || |||||||||||    
T  39646666 agtcatcccctcctaaaccctcaatccaaacaca 39646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 10315653 - 10315712
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaat 176  Q
    |||||||||||||||| |||||||||| | |||||||| |||| ||||||||||||||||    
T  10315653 ggaggatttacttttcttttttaaatttcagactatataacatatttttctaaaataaat 10315712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 18127390 - 18127347
Alignment:
Q  173 aaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||    
T  18127390 aaattaagtgtgattgaagtattatatgatcatttatcatgtta 18127347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 28074255 - 28074152
Alignment:
Q  169 aaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaa 268  Q
    ||||||||||||| |  |||||||||||||||||| ||||||| |||  ||  | || ||| || ||| ||||| ||||||| ||||||||||||| |||    
T  28074255 aaataaattaagtgtttttgaagtattatatgatcatttatcaggttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 28074156  T
Q  269 aagt 272  Q
    ||||    
T  28074155 aagt 28074152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 31553287 - 31553240
Alignment:
Q  216 aatatgttaactttttataaaacatttcataatgttcgtaatttaaaa 263  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  31553287 aatatgttaactttttaaaaaacatttcataatgtccgttatttaaaa 31553240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 40196530 - 40196604
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||| || |||||| |||||||| |||  ||||| |||||||||| ||||| ||||||||||    
T  40196530 ttagggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggac 40196604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 47229970 - 47229888
Alignment:
Q  183 tgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaat 265  Q
    |||||||| ||||| ||||| ||||||||||||||||||||  |||||||  ||| ||||||||||   |||| |||||||||    
T  47229970 tgattgaattattacatgattgtttatcatgttaatatgttcgctttttaagaaatatttcataatacccgtagtttaaaaat 47229888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 309
Target Start/End: Original strand, 12315523 - 12315584
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacacc 309  Q
    |||| |||||||||||| ||||||||| |||||| ||| |||| |||||||| |||||||||    
T  12315523 tgtttgtaatttaaaaaggaaaagtaagccctcctctcataaatcttccatctaaacacacc 12315584  T

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Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 309
Target Start/End: Original strand, 18536301 - 18536362
Alignment:
Q  248 tgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacacc 309  Q
    |||| |||||||||||| ||||||||| |||||| ||| |||| |||||||| |||||||||    
T  18536301 tgtttgtaatttaaaaaggaaaagtaagccctcctctcataaatcttccatctaaacacacc 18536362  T

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Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 282
Target Start/End: Complemental strand, 30592389 - 30592292
Alignment:
Q  185 attgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctccc 282  Q
    ||||||||||||||||||  |||||||| | | ||| | || |||||| ||| ||||| ||| |||  |||||||||||| ||||||||| |||||||    
T  30592389 attgaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctccc 30592292  T

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Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 28074103 - 28074175
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||||||||||  |||||||| |||  |||| | | ||||||| ||||||||||||||||    
T  28074103 agggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggac 28074175  T

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Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 3143564 - 3143615
Alignment:
Q  161 tttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcat 212  Q
    ||||| ||||||||||||||| |  |||||||||||||||||| ||||||||    
T  3143564 tttttataaaataaattaagtttttttgaagtattatatgatcatttatcat 3143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 13770945 - 13771020
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||||||| | |||  |||||||| |||  ||||||||||||| |  ||||||||||||||||    
T  13770945 tttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggac 13771020  T

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Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 19261992 - 19261945
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgtt 215  Q
    |||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  19261992 aaaataaattaattgtgattgaagtactatatgatcatttatcatgtt 19261945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 19262014 - 19262073
Alignment:
Q  253 gtaatttaaaaatgaaaagtaaaccctcccctcc-taaaccttccatccaaacacaccct 311  Q
    ||||||||||| |||||||||| |||||||||||  ||||| |||||||||||| |||||    
T  19262014 gtaatttaaaattgaaaagtaagccctcccctccaaaaaccctccatccaaacataccct 19262073  T

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Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 37925841 - 37925963
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggactatat-acatgtttttctaaaataaat 176  Q
    |||||||||||||||||| |||||  |||||||| |||  ||||| || ||||||  ||||||||||||| || || | | |||||||| | ||||| ||    
T  37925841 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaatagat 37925940  T
Q  177 taagtatgattgaagtattatat 199  Q
    ||||| |  ||||||||||||||    
T  37925941 taagtgtttttgaagtattatat 37925963  T

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Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 39856040 - 39856074
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||| |||||||||||||||||||||    
T  39856040 cgtaatttaaaaaagaaaagtaaaccctcccctcc 39856074  T

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Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 41496955 - 41497029
Alignment:
Q  77 ttagggtgtgtttggattgaaggtttgagaggggaa-ggaatggaggatttacttttcgtttttaaattacggac 150  Q
    ||||||||||||||||| || |||||  |||||||| |||  ||| |||||||||||  ||||||||||||||||    
T  41496955 ttagggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggac 41497029  T

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Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 41497132 - 41497166
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||| |||||||||||||||||||||    
T  41497132 cgtaatttaaaaaagaaaagtaaaccctcccctcc 41497166  T

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Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 48881711 - 48881558
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatga 267  Q
    ||||||||||||||||  |||||| ||||||| ||| |||||||||||  ||  | || ||| |  |||  |||| ||||||| ||||||||||||| ||    
T  48881711 aaaataaattaagtatttttgaagcattatataatcatttatcatgttgttaattcaattttctgaaaattattttataatgtccgtaatttaaaaaaga 48881612  T
Q  268 aaagtaaaccctcccctcc----------taaaccttccatccaaacacaccct 311  Q
    ||||||| || ||||||||          |||||| ||||||||||||||||||    
T  48881611 aaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccct 48881558  T

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Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 305
Target Start/End: Complemental strand, 18795788 - 18795611
Alignment:
Q  129 ttttcgtttttaaattacggactatataca-tgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| ||||||||||||| || ||||| | ||||||| ||||| |||| |||| | |||||| |||| || |||| ||||| |||||  ||| | |  |    
T  18795788 ttttcttttttaaattacgaacaatataaaatgtttttttaaaacaaatcaagtgttattgaattattgtacgatcatttattatgttgttatttcattt 18795689  T
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaaca 305  Q
    | || ||||| |||| ||| || | ||||||||||||  ||| |||||| ||| ||||| ||||| || |||||||||    
T  18795688 tattttaaaatattttatagtgcttgtaatttaaaaaataaatgtaaacactctcctcccaaaccctctatccaaaca 18795611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 28074135 - 28074102
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccctt 312  Q
    ||||||||||||||||| ||||||||||||||||    
T  28074135 tcccctcctaaaccttcaatccaaacacaccctt 28074102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 1013992 - 1013940
Alignment:
Q  253 gtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaaca 305  Q
    |||||||||||  |||||||||  |||||||||| ||||| ||||||||||||    
T  1013992 gtaatttaaaagagaaaagtaagtcctcccctccaaaaccctccatccaaaca 1013940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 16833945 - 16833869
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatg-gaggatttacttttcgtttttaaattacggact 151  Q
    ||||||||||||||||||  | | ||| ||||||||||||| | ||||| ||||||||| |||| ||||||| ||||    
T  16833945 tttagggtgtgtttggatgcaggatttaagaggggaaggaaggagaggagttacttttctttttaaaattacagact 16833869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 18231830 - 18231762
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattac 146  Q
    ||||||||||||||| ||  ||||  |||||||||| | || |||||||||||||| ||||||||||||    
T  18231830 agggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattac 18231762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 19835838 - 19835906
Alignment:
Q  206 ttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaa 274  Q
    |||| |||||| ||| |||| |||||| | ||||||| ||| | | |||||||||||||||||||||||    
T  19835838 ttatgatgttattattttaattttttaaagaacattttatagtttccgtaatttaaaaatgaaaagtaa 19835906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 24970192 - 24970236
Alignment:
Q  105 gaggggaaggaatggaggatttacttttcgtttttaaattacgga 149  Q
    |||||||||||  ||| |||||||||||| |||||||||||||||    
T  24970192 gaggggaaggaggggatgatttacttttcatttttaaattacgga 24970236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 33519135 - 33519083
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||| ||| |||||||||||||||||  |||||| | |||||||||||    
T  33519135 aaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcc 33519083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 33519260 - 33519292
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||| ||||||||||||||||||    
T  33519260 tcccctcctaaaccctccatccaaacacaccct 33519292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 34235183 - 34235243
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaac-----cctcccctcctaaaccttccatccaaacaca 307  Q
    |||||||||||||||||||||||||     |||| ||||||||||| || |||||||||||    
T  34235183 cgtaatttaaaaatgaaaagtaaacaccctcctctcctcctaaaccctcaatccaaacaca 34235243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 36267585 - 36267553
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||| ||||||||||||||||||    
T  36267585 tcccctcctaaaccctccatccaaacacaccct 36267553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 37925928 - 37925876
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||| | | |||||||||||||||||  |||||| |||||||||||||    
T  37925928 aaaacattttacattgttcgtaatttaaaaaataaaagtgaaccctcccctcc 37925876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 40196707 - 40196766
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    |||||||||||||  ||||||||| |||||||||| ||||| || ||||||| ||||||||    
T  40196707 cgtaatttaaaaacaaaaagtaaa-cctcccctcccaaaccctcaatccaaatacaccctt 40196766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 41496989 - 41496957
Alignment:
Q  279 tcccctcctaaaccttccatccaaacacaccct 311  Q
    |||||||||||||| ||||||||||||||||||    
T  41496989 tcccctcctaaaccctccatccaaacacaccct 41496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 43230305 - 43230273
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccct 284  Q
    ||||||||||||| |||||||||||||||||||    
T  43230305 cgtaatttaaaaaagaaaagtaaaccctcccct 43230273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 118 - 287
Target Start/End: Complemental strand, 16500 - 16330
Alignment:
Q  118 ggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||| |||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  16500 ggagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtta 16401  T
Q  217 atatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcct 287  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  16400 atatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccctcccctcct 16330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 79 - 283
Target Start/End: Complemental strand, 39434 - 39225
Alignment:
Q  79 agggtgtgtttggattgaaggtttgagaggggaa--ggaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaa 175  Q
    |||||||||||||||||| ||||| ||| |||||  |||  ||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  39434 agggtgtgtttggattgagggttt-agaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaa 39336  T
Q  176 ttaagtatgattgaag---tattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagt 272  Q
    |||||| |||||||||   |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  39335 ttaagtgtgattgaagaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 39236  T
Q  273 aaaccctcccc 283  Q
    |||||||||||    
T  39235 aaaccctcccc 39225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 39365 - 39399
Alignment:
Q  252 cgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||| |||||||||||||||||||||    
T  39365 cgtaatttaaaaaagaaaagtaaaccctcccctcc 39399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 76 - 312
Target Start/End: Original strand, 6581 - 6818
Alignment:
Q  76 tttagggtgtgtttggattgaaggtttgagaggggaaggaatgg-aggatttacttttcgtttttaaattacggactatata-catgtttttctaaaata 173  Q
    ||||||||||||||||||||||| |||  |||| ||||| | || ||| |||||||||| |||||||||||| ||||||||| | |||| ||||||||||    
T  6581 tttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaata 6680  T
Q  174 aattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||||| |||| |||||  |||| |||||||| ||| ||||||||||||| ||||||||    
T  6681 aatttagtgtgattgaagtattatatgatcgtttat-atgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagta 6779  T
Q  274 aaccctcccctcctaaaccttccatccaaacacaccctt 312  Q
    | ||||||||||||||| | |||||||||| ||||||||    
T  6780 agccctcccctcctaaatcctccatccaaagacaccctt 6818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 286
Target Start/End: Complemental strand, 6652 - 6619
Alignment:
Q  253 gtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    |||||||||||| |||||||||||||||||||||    
T  6652 gtaatttaaaaaagaaaagtaaaccctcccctcc 6619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 82 - 286
Target Start/End: Original strand, 1175 - 1381
Alignment:
Q  82 gtgtgtttggattgaaggtttgagaggggaag-gaatggaggatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaa 179  Q
    ||||||||||||||| |||||  ||||||||| ||  ||||  |||||||||| ||||||||||||||||||| || |||||| |||||||||    |||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgttattctaaaat----taa 1270  T
Q  180 gtatgattgaagtattata----tgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaa 275  Q
    |||||| ||||||||||||    |||||||||||||||  ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  1271 gtatgactgaagtattatatatatgatcgtttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaa 1370  T
Q  276 ccctcccctcc 286  Q
    || ||||||||    
T  1371 ccttcccctcc 1381  T

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Target: scaffold0171 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 124 - 276
Target Start/End: Original strand, 15996 - 16149
Alignment:
Q  124 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 222  Q
    |||||||||| |||||||||||| ||||||||| ||||||||| ||||| |||||| || ||||||||||||| ||| || |||| |||| |||||||||    
T  15996 tttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtattttataattgtttttcatattaatatgt 16095  T
Q  223 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 276  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||| |||||    
T  16096 taactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaataaac 16149  T

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Target: scaffold0294 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 15320 - 15458
Alignment:
Q  135 tttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttat 233  Q
    |||||||| |||||| || ||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||| || |||||     
T  15320 tttttaaactacggattacataacatgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgttgaccttttaa 15419  T
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagta 273  Q
    |||||| |||||| ||| |||||||||||||| |||||||    
T  15420 aaaaca-ttcatagtgtccgtaatttaaaaataaaaagta 15458  T

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Target: scaffold0341 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 280
Target Start/End: Original strand, 18821 - 18972
Alignment:
Q  129 ttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaact 227  Q
    ||||| ||||||||| || ||||||||| ||||| |||||||||||||||| || | |||||| |||||||||||| |||||||||||||||| ||||||    
T  18821 ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcatgttaatatattaact 18919  T
Q  228 ttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctc 280  Q
    | ||| |||| | |||||| ||| |   |||||||||||||||||||||||||    
T  18920 tcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaaccctc 18972  T

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Target: scaffold0007 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 242306 - 242425
Alignment:
Q  167 taaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatg 266  Q
    |||||||||| ||||||  ||||| |||||||| ||| ||||||||||   ||  | || |||||| ||| ||||| ||||||| ||||||||||||| |    
T  242306 taaaataaatgaagtatttttgaattattatatcatcatttatcatgtcgttaattcaattttttaaaaatcattttataatgtccgtaatttaaaaaag 242405  T
Q  267 aaaagtaaaccctcccctcc 286  Q
    ||||||||||||||||||||    
T  242406 aaaagtaaaccctcccctcc 242425  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 184688 - 184611
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcctaaaccttccatccaaacacaccct 311  Q
    ||||||||| |||  |||| |||||||||||  |||||| ||||||||||||||||||| || |||||||||||||||    
T  184688 aaaacattttatatagttcataatttaaaaaataaaagtgaaccctcccctcctaaaccctcaatccaaacacaccct 184611  T

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Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 81564 - 81516
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  81564 aaaataaatcaagtatgattgaagtattatatgatcatttatcatgtta 81516  T

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Target: scaffold0783 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0783
Description:

Target: scaffold0783; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 6063 - 6015
Alignment:
Q  168 aaaataaattaagtatgattgaagtattatatgatcgtttatcatgtta 216  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  6063 aaaataaatcaagtatgattcaagtattatatgatcatttatcatgtta 6015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 3234 - 3182
Alignment:
Q  234 aaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctcc 286  Q
    ||||||||||||| |||  |||||||||||| ||||||||||| |||||||||    
T  3234 aaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcc 3182  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 263
Target Start/End: Complemental strand, 69370 - 69264
Alignment:
Q  158 atgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaa--ctttttataaaacatttcataatgttcgta 255  Q
    |||||||| ||||||||||||||  |||  |||||||||||||||| |||||||| ||  ||| | ||  ||||||| |||| |||| ||||||||||||    
T  69370 atgtttttttaaaataaattaagggtgacagaagtattatatgatcatttatcatcttgttatttcaattcttttta-aaaagattttataatgttcgta 69272  T
Q  256 atttaaaa 263  Q
     |||||||    
T  69271 ttttaaaa 69264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 122069 - 122020
Alignment:
Q  236 aacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcccctc 285  Q
    ||||||| |||||||||||||||| |||| |||||| ||| |||||||||    
T  122069 aacattttataatgttcgtaattttaaaaagaaaagcaaatcctcccctc 122020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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