View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11128_high_8 (Length: 250)
Name: NF11128_high_8
Description: NF11128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11128_high_8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 45459505 - 45459747
Alignment:
| Q |
8 |
aagcaaagggatcggaaggtttcatgaaagtcacagatcttagcacaggtgctgtcacttttacctctccttctgatcctaatggaacaggtgccaattt |
107 |
Q |
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| T |
45459505 |
aagctaagggatcggagggtttcatgaaagtcacagatcttagcacaggtgctgtcacttttacctctccttctgatcctaatggaacaggtgccaattt |
45459604 |
T |
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| Q |
108 |
ggttaaagctgttgtggcacaaccatacaatatttcagtggtgcagatcagcactgtcattttgccaccatctttgcttgcttcctccaatgccacatca |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45459605 |
ggttaaagctgttgtggcacaaccatacaatatttcagtggtgcagatcagcactgtcattttgccaccatctttgcttgcttcctccaatgccacatca |
45459704 |
T |
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| Q |
208 |
catgctccttctccggctcctgttgtttcacctattccagctc |
250 |
Q |
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| T |
45459705 |
catgctccttctccggctcctgttgtttcacctattccagctc |
45459747 |
T |
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