View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11130_low_6 (Length: 218)
Name: NF11130_low_6
Description: NF11130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11130_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 34409412 - 34409595
Alignment:
| Q |
19 |
ctacagaaagttttgactgcatcaaatgtatttacatttttcggtaagtatgacattaaacgaggaaaatgagaaggggagaagaaaacaaatgagcgag |
118 |
Q |
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| T |
34409412 |
ctacagaaagttttgactgcatcaaatgtatttacatttttcggtaagtatgacattaaacgaggaaaatgagaaggggagaagaaaacaaatgagcgag |
34409511 |
T |
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| Q |
119 |
agaagcattgtccccgggtgagggcttaaatattaacatcttctaataagcgttttccacaaaaattgaaggagcaagcatgat |
202 |
Q |
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| T |
34409512 |
agaagcattgtccccgggtgagggctttaatattaacatcttctaataagcgttttccacaaaaattgaaggagcaagcatgat |
34409595 |
T |
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