View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11131_low_22 (Length: 255)
Name: NF11131_low_22
Description: NF11131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11131_low_22 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 255
Target Start/End: Original strand, 25840225 - 25840468
Alignment:
| Q |
13 |
agatgaagtaatgtaggatgagtgatacgggtatgtcataggaggttctctcaatgaaagcaccgattgatacagaaacaaat-ttgcactcttcaagtc |
111 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |
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| T |
25840225 |
agatggagtaatgtaggatgagtgatacgggtatgtcataggaggttctctcaatgaaagcaccgattgatacagaaaaaaaaattgcactcttcaagtc |
25840324 |
T |
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| Q |
112 |
aatgccaaaccccaaattttacgtatcaaattcctagtgagtttagcaaaattagggtctgtggttttggacaatctacattttagaatttcaagtgtta |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
25840325 |
aatgccaaaccccaaattttacgtatcaaattcctagtgagtttagcaaaattagggtccgtggttttggacaatctacattttagaatttcaagtgtta |
25840424 |
T |
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| Q |
212 |
tacagtgatatactttgtcaagttgcattgtgattccaaatata |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25840425 |
tacagtgatatactttgtcaagttgcattgtgattccaaatata |
25840468 |
T |
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