View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11132_high_17 (Length: 254)
Name: NF11132_high_17
Description: NF11132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11132_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 24 - 244
Target Start/End: Complemental strand, 43618621 - 43618401
Alignment:
| Q |
24 |
gtgtgtatatatattagagagagaacaaaaaacatgaagatgtattagagacacnnnnnnnnttagttacagtagttagaggttattatttacattgccc |
123 |
Q |
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| T |
43618621 |
gtgtgtatatatattagagagagaacaaaaaacatgaaaatgtattagtgacacaaaaaaaattagttacagtagttagaggttattatttacattgccc |
43618522 |
T |
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| Q |
124 |
ttataagtttaattggatcccatatatataattaacactcttattataaacgtcaaagaaaaaacactcttattatcaattgaagtattattttactttg |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43618521 |
ttataagtttaattggatcccatatatataattaacactcttattataaacctcaaagaaaaaacactcttattatcaattgaagtattattttactttg |
43618422 |
T |
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| Q |
224 |
actcgtttttctcctattcat |
244 |
Q |
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||||||||||||||||||||| |
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| T |
43618421 |
actcgtttttctcctattcat |
43618401 |
T |
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