View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11133_low_11 (Length: 504)

Name: NF11133_low_11
Description: NF11133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11133_low_11
NF11133_low_11
[»] chr1 (47 HSPs)
chr1 (14-485)||(4077881-4078344)
chr1 (303-373)||(7218087-7218157)
chr1 (309-371)||(25479570-25479632)
chr1 (309-383)||(45205045-45205119)
chr1 (309-377)||(7137017-7137085)
chr1 (313-373)||(25005820-25005880)
chr1 (309-373)||(28689471-28689537)
chr1 (309-367)||(7472304-7472362)
chr1 (333-383)||(8130413-8130463)
chr1 (313-383)||(27887141-27887211)
chr1 (337-466)||(33527194-33527325)
chr1 (309-367)||(35590911-35590969)
chr1 (312-374)||(37241844-37241906)
chr1 (309-374)||(23902086-23902151)
chr1 (303-372)||(31517753-31517822)
chr1 (312-373)||(44422686-44422747)
chr1 (337-373)||(12564921-12564957)
chr1 (337-373)||(25006081-25006117)
chr1 (333-377)||(42556674-42556718)
chr1 (333-372)||(17422981-17423020)
chr1 (309-360)||(27140478-27140529)
chr1 (327-377)||(40751167-40751218)
chr1 (303-373)||(4622080-4622150)
chr1 (309-383)||(10199427-10199501)
chr1 (333-383)||(10581120-10581170)
chr1 (327-373)||(17269237-17269283)
chr1 (345-383)||(29007771-29007809)
chr1 (309-367)||(34290229-34290287)
chr1 (309-371)||(37811841-37811903)
chr1 (309-351)||(52190138-52190180)
chr1 (316-373)||(15515528-15515585)
chr1 (309-362)||(26779944-26779997)
chr1 (309-358)||(34952217-34952266)
chr1 (303-360)||(35179139-35179196)
chr1 (309-366)||(37842374-37842431)
chr1 (338-383)||(48830124-48830169)
chr1 (303-375)||(6292478-6292550)
chr1 (309-369)||(26946466-26946526)
chr1 (339-375)||(28467356-28467392)
chr1 (440-468)||(30043913-30043941)
chr1 (303-383)||(30257660-30257740)
chr1 (309-377)||(31294540-31294608)
chr1 (303-376)||(35925670-35925747)
chr1 (303-371)||(39270438-39270506)
chr1 (309-381)||(43338095-43338167)
chr1 (303-367)||(45975683-45975747)
chr1 (309-373)||(49888754-49888818)
[»] chr2 (40 HSPs)
chr2 (309-374)||(39983328-39983393)
chr2 (303-383)||(33942127-33942207)
chr2 (309-373)||(11513885-11513949)
chr2 (320-383)||(5043590-5043653)
chr2 (309-374)||(43985022-43985087)
chr2 (303-383)||(11307289-11307369)
chr2 (230-296)||(28803451-28803517)
chr2 (309-374)||(18179259-18179324)
chr2 (308-360)||(9477952-9478004)
chr2 (337-373)||(15780064-15780100)
chr2 (309-373)||(18066115-18066179)
chr2 (309-353)||(35379035-35379079)
chr2 (315-383)||(36863650-36863718)
chr2 (303-375)||(43635114-43635186)
chr2 (317-360)||(3049974-3050017)
chr2 (335-374)||(7862739-7862778)
chr2 (316-375)||(13869121-13869180)
chr2 (409-464)||(28039453-28039508)
chr2 (313-371)||(6993747-6993805)
chr2 (303-373)||(9395117-9395187)
chr2 (333-383)||(10143149-10143199)
chr2 (337-383)||(17952748-17952794)
chr2 (309-355)||(24097813-24097859)
chr2 (424-461)||(4090246-4090283)
chr2 (229-286)||(6547982-6548039)
chr2 (303-360)||(33941909-33941966)
chr2 (316-377)||(37292373-37292434)
chr2 (309-373)||(656796-656860)
chr2 (309-373)||(1625887-1625951)
chr2 (309-361)||(9174814-9174866)
chr2 (303-383)||(13736306-13736386)
chr2 (309-369)||(16503343-16503403)
chr2 (337-373)||(25800816-25800852)
chr2 (444-472)||(26671295-26671323)
chr2 (309-373)||(29316794-29316858)
chr2 (337-381)||(32694191-32694235)
chr2 (337-369)||(34926955-34926987)
chr2 (313-373)||(41875676-41875736)
chr2 (309-373)||(43205296-43205360)
chr2 (445-477)||(44443199-44443231)
[»] chr5 (40 HSPs)
chr5 (313-373)||(2568645-2568705)
chr5 (309-373)||(41016166-41016230)
chr5 (309-360)||(5284467-5284518)
chr5 (314-373)||(34245711-34245770)
chr5 (303-373)||(37588373-37588443)
chr5 (424-464)||(3255765-3255805)
chr5 (309-373)||(10272450-10272514)
chr5 (309-369)||(32172644-32172704)
chr5 (303-373)||(37690649-37690720)
chr5 (309-367)||(34975357-34975415)
chr5 (303-373)||(37526212-37526282)
chr5 (327-373)||(39257424-39257470)
chr5 (303-359)||(4014437-4014493)
chr5 (309-373)||(15309012-15309076)
chr5 (303-383)||(17258896-17258976)
chr5 (309-361)||(17368675-17368727)
chr5 (309-373)||(18543216-18543279)
chr5 (319-375)||(34117565-34117621)
chr5 (306-373)||(7319393-7319460)
chr5 (229-304)||(11104980-11105055)
chr5 (309-373)||(19138736-19138802)
chr5 (303-373)||(6587120-6587190)
chr5 (338-376)||(18704084-18704122)
chr5 (315-361)||(28776992-28777038)
chr5 (337-375)||(34205224-34205262)
chr5 (309-367)||(43300871-43300929)
chr5 (309-358)||(10125737-10125786)
chr5 (309-370)||(31030149-31030210)
chr5 (309-358)||(40205093-40205142)
chr5 (327-375)||(9634757-9634805)
chr5 (230-286)||(10771809-10771865)
chr5 (309-373)||(12425558-12425622)
chr5 (309-373)||(13604868-13604932)
chr5 (327-383)||(14295483-14295539)
chr5 (439-467)||(26796338-26796366)
chr5 (439-467)||(26799856-26799884)
chr5 (439-467)||(26807406-26807434)
chr5 (316-372)||(29054896-29054952)
chr5 (439-467)||(38105030-38105058)
chr5 (313-373)||(39105451-39105511)
[»] chr3 (46 HSPs)
chr3 (306-360)||(51130750-51130804)
chr3 (303-373)||(21367654-21367724)
chr3 (304-373)||(14548735-14548804)
chr3 (337-373)||(22214706-22214742)
chr3 (327-383)||(43875625-43875681)
chr3 (313-383)||(19679783-19679853)
chr3 (309-367)||(25075059-25075117)
chr3 (309-383)||(48807685-48807759)
chr3 (313-375)||(51510216-51510278)
chr3 (309-382)||(27792850-27792923)
chr3 (311-376)||(47904084-47904149)
chr3 (304-360)||(1816583-1816639)
chr3 (309-373)||(20502087-20502151)
chr3 (309-361)||(24280710-24280762)
chr3 (303-367)||(30573927-30573991)
chr3 (309-361)||(53789480-53789532)
chr3 (306-373)||(1125782-1125849)
chr3 (316-367)||(22203423-22203474)
chr3 (333-376)||(25183031-25183074)
chr3 (309-360)||(34610825-34610876)
chr3 (338-373)||(41057025-41057060)
chr3 (309-368)||(43115048-43115107)
chr3 (309-371)||(24887302-24887364)
chr3 (309-383)||(25453878-25453952)
chr3 (303-361)||(44747421-44747479)
chr3 (313-358)||(2825149-2825194)
chr3 (303-360)||(20669172-20669229)
chr3 (338-383)||(24235731-24235776)
chr3 (334-383)||(31723139-31723188)
chr3 (406-463)||(37138241-37138298)
chr3 (338-375)||(37788845-37788882)
chr3 (303-360)||(40665429-40665486)
chr3 (229-302)||(44295604-44295677)
chr3 (303-360)||(54775127-54775184)
chr3 (439-467)||(9995850-9995878)
chr3 (439-467)||(10131536-10131564)
chr3 (439-467)||(10216867-10216895)
chr3 (439-467)||(10220386-10220414)
chr3 (313-361)||(18405854-18405902)
chr3 (337-373)||(20874351-20874387)
chr3 (337-373)||(21872318-21872354)
chr3 (335-375)||(24774639-24774679)
chr3 (229-285)||(25459550-25459606)
chr3 (337-373)||(33405214-33405250)
chr3 (335-383)||(35708296-35708344)
chr3 (309-377)||(35972040-35972108)
[»] chr8 (42 HSPs)
chr8 (303-373)||(7714229-7714299)
chr8 (303-383)||(10075564-10075644)
chr8 (309-361)||(27028830-27028882)
chr8 (303-383)||(31862470-31862550)
chr8 (392-467)||(34522160-34522235)
chr8 (309-383)||(11795069-11795143)
chr8 (309-383)||(28769358-28769432)
chr8 (337-383)||(29973058-29973104)
chr8 (309-383)||(30013195-30013269)
chr8 (303-373)||(39561554-39561624)
chr8 (334-383)||(10460580-10460629)
chr8 (310-375)||(24558838-24558903)
chr8 (310-375)||(27754389-27754454)
chr8 (321-374)||(35869823-35869876)
chr8 (337-373)||(9834836-9834872)
chr8 (309-373)||(9956833-9956897)
chr8 (303-351)||(11494155-11494203)
chr8 (333-373)||(31884581-31884621)
chr8 (328-368)||(35298515-35298555)
chr8 (229-292)||(6526172-6526235)
chr8 (309-360)||(11569476-11569527)
chr8 (313-379)||(5227516-5227582)
chr8 (309-383)||(6864478-6864552)
chr8 (303-373)||(12361179-12361249)
chr8 (303-353)||(20672757-20672807)
chr8 (337-383)||(27728068-27728114)
chr8 (309-359)||(39881771-39881821)
chr8 (303-360)||(1930035-1930092)
chr8 (236-301)||(2235583-2235648)
chr8 (312-373)||(8062511-8062572)
chr8 (309-375)||(12132818-12132886)
chr8 (303-372)||(31705073-31705142)
chr8 (342-383)||(43704430-43704471)
chr8 (309-377)||(1433531-1433599)
chr8 (309-357)||(4762512-4762560)
chr8 (309-373)||(7645965-7646029)
chr8 (309-361)||(7918792-7918844)
chr8 (337-377)||(11056714-11056754)
chr8 (337-373)||(34770879-34770915)
chr8 (315-371)||(39551234-39551290)
chr8 (317-361)||(43709272-43709316)
chr8 (309-353)||(44236842-44236886)
[»] chr6 (28 HSPs)
chr6 (328-373)||(5623143-5623188)
chr6 (333-377)||(1402979-1403023)
chr6 (303-383)||(2117380-2117460)
chr6 (313-373)||(28088245-28088305)
chr6 (313-360)||(31812036-31812083)
chr6 (303-373)||(4246397-4246467)
chr6 (303-353)||(8364989-8365039)
chr6 (334-383)||(2027450-2027499)
chr6 (309-373)||(281867-281931)
chr6 (309-373)||(1275136-1275200)
chr6 (311-367)||(1401102-1401158)
chr6 (303-383)||(3155153-3155232)
chr6 (309-373)||(4006701-4006765)
chr6 (327-375)||(24838780-24838828)
chr6 (303-359)||(31776288-31776344)
chr6 (309-373)||(32386582-32386646)
chr6 (309-372)||(13907573-13907636)
chr6 (312-358)||(103433-103479)
chr6 (424-466)||(7946025-7946067)
chr6 (309-367)||(12230354-12230412)
chr6 (424-465)||(2734949-2734990)
chr6 (303-360)||(5328973-5329030)
chr6 (234-303)||(5977005-5977074)
chr6 (340-373)||(7485118-7485151)
chr6 (309-361)||(835268-835320)
chr6 (309-361)||(837235-837287)
chr6 (310-354)||(2205610-2205654)
chr6 (309-373)||(31671093-31671157)
[»] chr4 (37 HSPs)
chr4 (309-373)||(53943593-53943657)
chr4 (303-366)||(11802528-11802591)
chr4 (303-373)||(30207584-30207654)
chr4 (321-374)||(24444024-24444077)
chr4 (309-373)||(2996560-2996624)
chr4 (309-376)||(9841050-9841115)
chr4 (309-373)||(10192271-10192334)
chr4 (313-361)||(17822888-17822936)
chr4 (313-373)||(29778782-29778842)
chr4 (310-373)||(2900327-2900390)
chr4 (314-361)||(28615333-28615380)
chr4 (306-373)||(42866055-42866122)
chr4 (309-360)||(47800623-47800674)
chr4 (303-358)||(55084494-55084549)
chr4 (333-383)||(927453-927503)
chr4 (303-357)||(4798579-4798633)
chr4 (311-373)||(8422860-8422922)
chr4 (230-276)||(32420979-32421025)
chr4 (309-367)||(49202638-49202696)
chr4 (337-375)||(49219124-49219162)
chr4 (338-375)||(11842200-11842237)
chr4 (410-470)||(22666848-22666911)
chr4 (340-377)||(24160545-24160582)
chr4 (309-373)||(8468935-8468999)
chr4 (327-367)||(16494842-16494882)
chr4 (337-373)||(18630667-18630703)
chr4 (327-375)||(27970043-27970091)
chr4 (309-369)||(28423521-28423581)
chr4 (309-373)||(29263357-29263421)
chr4 (309-361)||(30024705-30024757)
chr4 (316-360)||(32764934-32764978)
chr4 (313-373)||(36722692-36722752)
chr4 (309-373)||(46090833-46090896)
chr4 (309-373)||(47118984-47119048)
chr4 (309-353)||(53673677-53673721)
chr4 (303-383)||(54325050-54325130)
chr4 (339-383)||(55870390-55870434)
[»] chr7 (32 HSPs)
chr7 (312-358)||(48917368-48917414)
chr7 (309-370)||(21453284-21453345)
chr7 (311-383)||(23721483-23721555)
chr7 (337-377)||(25558238-25558278)
chr7 (337-377)||(25558436-25558476)
chr7 (313-373)||(30812135-30812195)
chr7 (303-375)||(40688999-40689071)
chr7 (337-377)||(44241842-44241882)
chr7 (301-373)||(47177623-47177695)
chr7 (309-364)||(514763-514818)
chr7 (340-383)||(9527140-9527183)
chr7 (316-383)||(17989049-17989116)
chr7 (309-376)||(24363620-24363687)
chr7 (342-377)||(25507332-25507367)
chr7 (316-383)||(27481320-27481387)
chr7 (312-367)||(46104589-46104644)
chr7 (303-361)||(20526445-20526503)
chr7 (309-375)||(24909649-24909715)
chr7 (310-360)||(39334193-39334243)
chr7 (306-360)||(39360023-39360077)
chr7 (303-361)||(39967919-39967977)
chr7 (422-468)||(40598461-40598507)
chr7 (316-373)||(30456476-30456533)
chr7 (333-373)||(1417251-1417291)
chr7 (309-373)||(5628585-5628649)
chr7 (309-353)||(7244687-7244731)
chr7 (337-373)||(11208436-11208472)
chr7 (321-373)||(18350738-18350790)
chr7 (282-361)||(20881630-20881707)
chr7 (309-373)||(27378847-27378911)
chr7 (303-367)||(39907796-39907860)
chr7 (309-369)||(44151499-44151559)
[»] scaffold0091 (1 HSPs)
scaffold0091 (313-379)||(6933-6999)
[»] scaffold0024 (1 HSPs)
scaffold0024 (337-373)||(27563-27599)


Alignment Details
Target: chr1 (Bit Score: 399; Significance: 0; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 14 - 485
Target Start/End: Original strand, 4077881 - 4078344
Alignment:
Q  14 gaaccaattcattactagggatcaaattaaatctatctagaatgcaaaacaacaacaatgaaacagaataataacaatataacagttacacaaatagtag 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||    
T  4077881 gaaccaattcattactagggatcaaattaaatatatctagaatgcaaaacaacaacaatgaaacagaac--------tataacagttacacaaatagtag 4077972  T
Q  114 tagtagcacaaatacctcatggggcatgagagcttttggaataaccctgtaaatatagaaaggtacatatgagtgcgaatcaaacaaatcagtaacaata 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4077973 tagtagcacaaatacctcatggggcatgagagcttttggaataaccctgtaaatatagaaaggtacatatgagtgcaaatcaaacaaatcagtaacaata 4078072  T
Q  214 caaagctttgtgccggtttggattgacttattcgagcttagctaccagcagaagcacttgtgatattgtttgacagaacatataaaaacagctgctttca 313  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4078073 caaagctttgtgccagtttggattgacttattcgaggttagctaccagcagaagcacttgtgatattgtttgacagaacttataaaaatagctgctttca 4078172  T
Q  314 gcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgactgtcatgctttgtgtcacagaagtaacttat 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  4078173 gcttattttcattagctcgccatgatagcttatgaaaacaacttatagattatatgaaaatagtttgactgtcatactttgtgtcacagaagtaacttat 4078272  T
Q  414 tcataagagattatgctgtaaacttcaaaataagttgtttatccaaacagggccaaagtgatatcaagcaat 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4078273 tcataagagattatgctgtaaacttcaaaataagttgtttatccaaacagggccaaagtgatatcaaacaat 4078344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 7218087 - 7218157
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||| ||||||||||| || || ||| ||||| ||||||||||||||||||| |||||||||||    
T  7218087 agctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaa 7218157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 25479632 - 25479570
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaa 371  Q
    ||||||||||||||||| ||||| | | |||||||||||||||||||||||||  ||||||||    
T  25479632 tttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaa 25479570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 45205119 - 45205045
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||| ||| | |||  |||||||||||||||||||||||| ||| ||||||| ||||||| |||||    
T  45205119 tttcagcttatttccatgaactctacatgatagcttatgaaaacaacttctagcttatatggaaatagtttgact 45205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 7137017 - 7137085
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    ||||||||||||||||| || || ||| ||||||||||||||||| ||||||| |||||  ||||||||    
T  7137017 tttcagcttattttcataagttctccaagatagcttatgaaaacagcttatagattatacaaaaatagt 7137085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 25005820 - 25005880
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| |||| || ||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  25005820 agcttgtttttataagctctccaggatagcttatgaaaacaacttatagcttatatgaaaa 25005880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 28689471 - 28689537
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttat--gaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| ||||  ||| ||||||||||  ||||||||||||||| |||||||||||    
T  28689471 tttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaa 28689537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 7472362 - 7472304
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||||||||||||||| ||||| ||| ||||||||||| ||||| ||||||| |||||    
T  7472362 tttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattata 7472304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 8130463 - 8130413
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||||||||||||||| |||| |||||| ||| |||||    
T  8130463 ccatgatagcttatgaaaacaacttatagcttatgtgaaaacagtttgact 8130413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 27887141 - 27887211
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||||||| ||  |||| ||||||||| ||||||||||||||||||| ||||||| |||| || |||||    
T  27887141 agcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttatatggaaattgtttgact 27887211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 466
Target Start/End: Original strand, 33527194 - 33527325
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaatagtctgactgtcatg---ctttgtgtcacagaagtaacttattcataagagattatgctgta 433  Q
    |||| |||||||||||| ||||||| ||||||||||| ||| |||||||  |    |||| |||   |||| || |||||||||||| | ||||||| ||    
T  33527194 gataacttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttt-tgttttagaaatagcttattcataagcgcttatgctcta 33527292  T
Q  434 aacttcaaaataagttgtttatccaaacagggc 466  Q
    | || ||||||||| ||||||||||||||||||    
T  33527293 agctgcaaaataagctgtttatccaaacagggc 33527325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 35590911 - 35590969
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||||||||||| ||| ||||| |||||||||||||||||| | |||||||| |||||    
T  35590911 tttcagcttatttccataagctctccatgatagcttatgaaatcgacttatagcttata 35590969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 374
Target Start/End: Original strand, 37241844 - 37241906
Alignment:
Q  312 cagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaat 374  Q
    |||||||||||||| ||||| | | |||| |||||||||||||||| ||| ||||||||||||    
T  37241844 cagcttattttcataagctctctaggatatcttatgaaaacaacttctagcttatatgaaaat 37241906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 23902086 - 23902151
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaat 374  Q
    |||||||||| || ||| ||||| | | |||||||| |||||||||||||||| ||||||||||||    
T  23902086 tttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaaat 23902151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 372
Target Start/End: Original strand, 31517753 - 31517822
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaa 372  Q
    ||||| ||||||||||||||||| ||||| ||| || || ||||||| ||| ||||||| ||||||||||    
T  31517753 agctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttatatgaaa 31517822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 44422747 - 44422686
Alignment:
Q  312 cagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||||||||| ||||| ||| |||||||||| |||| | ||||||| |||||||||||    
T  44422747 cagcttattttcataagctctccaggatagcttataaaaatagcttatagcttatatgaaaa 44422686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 12564921 - 12564957
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||||||||||| |||||||||||    
T  12564921 gatagcttatgaaaacaacttatagcttatatgaaaa 12564957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 25006081 - 25006117
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||||||||||| |||||||||||    
T  25006081 gatagcttatgaaaacaacttatagcttatatgaaaa 25006117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 42556674 - 42556718
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||    
T  42556674 ccatgatagcttatgaaaacaacttatagcttatataaaagtagt 42556718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 372
Target Start/End: Original strand, 17422981 - 17423020
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaa 372  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  17422981 ccatgatagcatatgaaaacaacttatagcttatatgaaa 17423020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 27140529 - 27140478
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||||||| ||| ||||| |||||||||||||| |||||| ||||||    
T  27140529 tttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 40751167 - 40751218
Alignment:
Q  327 agctcgccatgatagcttatgaaaacaactt-ataggttatatgaaaatagt 377  Q
    ||||| ||||||| ||||||||||||||||| |||| |||||||||||||||    
T  40751167 agctctccatgatggcttatgaaaacaacttaatagtttatatgaaaatagt 40751218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 4622150 - 4622080
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||| ||||||||||||  ||||| ||| |||||| |||| ||||| ||||||| |||||||||||    
T  4622150 agctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaa 4622080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 10199427 - 10199501
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||| ||||| | |  |||||||||||||| | ||||| | ||||| ||||||||| |||||    
T  10199427 tttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgact 10199501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 10581120 - 10581170
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||| |||||||||||||||||||||||| ||| ||||||| ||| |||||    
T  10581120 ccataatagcttatgaaaacaacttatagcttaaatgaaaaaagtttgact 10581170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 17269283 - 17269237
Alignment:
Q  327 agctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||| ||||||||||||||||||||||| | |||||||||||    
T  17269283 agctctccaggatagcttatgaaaacaacttattgcttatatgaaaa 17269237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 383
Target Start/End: Original strand, 29007771 - 29007809
Alignment:
Q  345 atgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  29007771 atgaaaacaacttatagcttatatgaaaatagtttgact 29007809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 34290287 - 34290229
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||||||||||||||| || ||  || ||||||||||||||||| ||||||| |||||    
T  34290287 tttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttata 34290229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 37811903 - 37811841
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaa 371  Q
    ||||| ||||||| ||||||||| ||||||| ||||||||||||| |||| |  |||||||||    
T  37811903 tttcaacttatttccattagctctccatgatggcttatgaaaacagcttacaatttatatgaa 37811841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 351
Target Start/End: Complemental strand, 52190180 - 52190138
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaa 351  Q
    ||||||||||||||| | ||||| |||||||||||||||||||    
T  52190180 tttcagcttattttcgtaagctctccatgatagcttatgaaaa 52190138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 15515585 - 15515528
Alignment:
Q  316 ttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||| ||| ||||  |||||||| |||||||||||||||||||| ||||| |||||    
T  15515585 ttatttccataagctatccatgataacttatgaaaacaacttatagcttatacgaaaa 15515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 362
Target Start/End: Original strand, 26779944 - 26779997
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatagg 362  Q
    ||||| ||||||||||| || ||  || ||||||||||||||||||||||||||    
T  26779944 tttcaacttattttcataagttcttcaagatagcttatgaaaacaacttatagg 26779997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 34952266 - 34952217
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaactta 358  Q
    ||||||||||||||||| || || |  |||||||||||||||||||||||    
T  34952266 tttcagcttattttcataagttctctttgatagcttatgaaaacaactta 34952217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 35179196 - 35179139
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||| ||||||||||||||||| || || |||| ||| |||||||||||| ||||||    
T  35179196 agctgttttcagcttattttcataagttctccataataacttatgaaaacagcttata 35179139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 366
Target Start/End: Original strand, 37842374 - 37842431
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttat 366  Q
    |||||||||||||| || || ||  || ||||||||||||||||||||||||| ||||    
T  37842374 tttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttat 37842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 48830124 - 48830169
Alignment:
Q  338 atagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||  |||||| ||||||||||||||| |||||    
T  48830124 atagcttatgaaaacagtttatagcttatatgaaaatagtttgact 48830169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 6292550 - 6292478
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||| ||||||||||||||||| ||||| |||  |||| ||| ||||| | |||||| ||||| ||||||||    
T  6292550 agctgttttcagcttattttcataagctctccaaaatagtttacgaaaatagcttataagttatgtgaaaata 6292478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 26946466 - 26946526
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatg 369  Q
    ||||||||||||||||| |  || | | |||||||||||||||| |||||||| |||||||    
T  26946466 tttcagcttattttcatgacttctctaagatagcttatgaaaacgacttatagcttatatg 26946526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 375
Target Start/End: Original strand, 28467356 - 28467392
Alignment:
Q  339 tagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  28467356 tagcttatgaaaacaacttgtagcttatatgaaaata 28467392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 468
Target Start/End: Original strand, 30043913 - 30043941
Alignment:
Q  440 aaaataagttgtttatccaaacagggcca 468  Q
    |||||||||||||||||||||||||||||    
T  30043913 aaaataagttgtttatccaaacagggcca 30043941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 30257740 - 30257660
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| |||||||||||||  || ||| | ||| ||||| |||||||||||||||| || ||||||| ||| ||| |||||    
T  30257740 agctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgact 30257660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 31294540 - 31294608
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    ||||| ||||||||||| ||||| | ||||||| |||  |||||||||||||| |||| || |||||||    
T  31294540 tttcaacttattttcataagctctctatgatagtttacaaaaacaacttatagtttatgtggaaatagt 31294608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 376
Target Start/End: Complemental strand, 35925747 - 35925670
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatg----aaaacaacttataggttatatgaaaatag 376  Q
    ||||| ||||| ||||||| ||| | ||| |||||||||||||||     ||||||||||||| ||||||||||||||    
T  35925747 agctgttttcaacttatttccataaactctccatgatagcttatggaaacaaacaacttatagtttatatgaaaatag 35925670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 39270438 - 39270506
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaa 371  Q
    ||||| ||||| |||||||||||  |||| | ||| ||||||||||||||| ||||||  |||||||||    
T  39270438 agctgttttcaacttattttcatatgctctctatggtagcttatgaaaacagcttatatcttatatgaa 39270506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 43338167 - 43338095
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctga 381  Q
    ||||||| ||||||||| ||||| ||||| |||||||||||||   || | || ||||||||||| |||||||    
T  43338167 tttcagcctattttcataagctctccatgttagcttatgaaaatggctcaaagcttatatgaaaacagtctga 43338095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 45975747 - 45975683
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||| ||||||||||||||||| |  || ||| ||||||||||||||||| ||| ||| |||||    
T  45975747 agctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagcttata 45975683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 49888818 - 49888754
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||| |||||||||||| || || | | |||||||||||||||||||| |||| ||||| |||||    
T  49888818 tttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaa 49888754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 309 - 374
Target Start/End: Complemental strand, 39983393 - 39983328
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaat 374  Q
    |||||| |||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  39983393 tttcagtttattttcattagctctccaggatagcttatgaaaacaacttatagcttatatgaaaat 39983328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 33942207 - 33942127
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| |||||||| |||||||||||||| | ||||| ||||||||||||||||||||| ||| ||||||| ||| |||||    
T  33942207 agctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaacagtttgact 33942127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 11513949 - 11513885
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| ||  || || ||||||||||||||||||||||||||||| |||||||||||    
T  11513949 tttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaa 11513885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 383
Target Start/End: Original strand, 5043590 - 5043653
Alignment:
Q  320 tttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||||||||  ||||||||||||||||||||||||| ||| ||||||||||| ||| |||||    
T  5043590 tttcattagctatccatgatagcttatgaaaacaacttctagcttatatgaaaacagtttgact 5043653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 43985022 - 43985087
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaat 374  Q
    ||||||||||||||||| |||||  || ||||||||||||||||||||||||  ||||| ||||||    
T  43985022 tttcagcttattttcataagctcttcaagatagcttatgaaaacaacttataatttatacgaaaat 43985087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 11307369 - 11307289
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| |||| |||||||||||||||||| ||| |||||| |||||| | || |||||| || |||||||||||| |||||    
T  11307369 agctgttttctgcttattttcattagctctccaagatagcgtatgaagataagttatagcttttatgaaaatagtttgact 11307289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 28803451 - 28803517
Alignment:
Q  230 tttggattgacttattcgagcttagctaccagcagaagcacttgtgatattgtttgacagaacatat 296  Q
    |||||||||||||||| ||||||| ||||| ||| |||||| ||||| | ||||||| |||||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatat 28803517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 18179259 - 18179324
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaat 374  Q
    ||||||||||||||| | || || ||| |||||||||||||| || ||||||| ||||||||||||    
T  18179259 tttcagcttattttcgtaagttctccaggatagcttatgaaagcagcttatagcttatatgaaaat 18179324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 9478004 - 9477952
Alignment:
Q  308 ctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    |||||| ||||||||||| | ||| ||| ||||||||||||||||||||||||    
T  9478004 ctttcaacttattttcataacctctccaggatagcttatgaaaacaacttata 9477952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 15780100 - 15780064
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15780100 gatagcttatgaaaacaacttatagattatatgaaaa 15780064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 18066179 - 18066115
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||| | || || ||| ||||||||||||||||| ||||||| |||||||||||    
T  18066179 tttcaccttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatgaaaa 18066115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 35379035 - 35379079
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaaca 353  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||    
T  35379035 tttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 383
Target Start/End: Original strand, 36863650 - 36863718
Alignment:
Q  315 cttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||| ||||| ||| |||||||||||||||||| |||||  |||||| ||||| || |||||    
T  36863650 cttattttcataagctctccaagatagcttatgaaaacaatttataacttatataaaaattgtttgact 36863718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 375
Target Start/End: Original strand, 43635114 - 43635186
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||| ||| ||||||||||||| ||||   ||||||||||||||| ||||||||||||  ||||| ||||||    
T  43635114 agctgttttaagcttattttcataagcttttcatgatagcttatgagaacaacttatagcgtatataaaaata 43635186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 360
Target Start/End: Complemental strand, 3050017 - 3049974
Alignment:
Q  317 tattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||    
T  3050017 tattttcataagctctccatgatagcttatgaaaacagcttata 3049974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 7862778 - 7862739
Alignment:
Q  335 atgatagcttatgaaaacaacttataggttatatgaaaat 374  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  7862778 atgatagcttatgaaaccaacttatagcttatatgaaaat 7862739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 13869121 - 13869180
Alignment:
Q  316 ttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||||||||||| || ||| |||| |||||||||||| ||||||| ||| |||||||||    
T  13869121 ttattttcattagttctccaggataacttatgaaaacagcttatagcttagatgaaaata 13869180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 28039453 - 28039508
Alignment:
Q  409 cttattcataagagattatgctgtaaacttcaaaataagttgtttatccaaacagg 464  Q
    |||||||||| | | ||||||| |||||| |||| |||||||||||||||||||||    
T  28039453 cttattcatatgcgcttatgctataaactgcaaattaagttgtttatccaaacagg 28039508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 6993747 - 6993805
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaa 371  Q
    ||||||||||||| ||||| | |  |||||||||||||||||| ||||| |||||||||    
T  6993747 agcttattttcataagctctcaagcatagcttatgaaaacaacctatagcttatatgaa 6993805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 9395187 - 9395117
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||||||||| |||||  ||  ||| || ||||||||| ||||||| |||||||||||    
T  9395187 agctgttttcagcttattttcataagctctacagaataactaatgaaaacagcttatagattatatgaaaa 9395117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 10143199 - 10143149
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||||| ||||||||| |||||| |||| ||| |||||    
T  10143199 ccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgact 10143149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 17952748 - 17952794
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  17952748 gatagcttatgaaaacatcttgtagcttatatgaaaatagtttgact 17952794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 24097859 - 24097813
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaac 355  Q
    ||||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  24097859 tttcagcttattttcataagctctccaggataacttatgaaaacaac 24097813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 4090283 - 4090246
Alignment:
Q  424 ttatgctgtaaacttcaaaataagttgtttatccaaac 461  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  4090283 ttatgctttaagcttcaaaataagttgtttatccaaac 4090246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 6548039 - 6547982
Alignment:
Q  229 gtttggattgacttattcgagcttagctaccagcagaagcacttgtgatattgtttga 286  Q
    |||||||||||||||||| |||||| |||| |||| ||| |||||||| | |||||||    
T  6548039 gtttggattgacttattcaagcttatctactagcataagaacttgtgagactgtttga 6547982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 33941966 - 33941909
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||||| |||||| |||| | ||| ||| |||||||||||||||||| |||||    
T  33941966 agctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttata 33941909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 37292373 - 37292434
Alignment:
Q  316 ttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    ||||| |||| | ||| ||| ||||||||| |||||||||| |||| |||||||||||||||    
T  37292373 ttattgtcataaactctccaggatagcttaagaaaacaactaatagcttatatgaaaatagt 37292434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 656796 - 656860
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||| |||||  || |||||||||||||| ||||||| || ||||| |||||    
T  656796 tttcatcttattttcataagctctgcaagatagcttatgaaatcaacttacagcttatacgaaaa 656860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 1625951 - 1625887
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||| |||||| | || || ||| ||||||||||||||||||||||||  ||||| |||||    
T  1625951 tttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaa 1625887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 9174866 - 9174814
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||||||||||||||| |||||   | ||||||||||||||||| |||||||    
T  9174866 tttcagcttattttcataagctctgtaagatagcttatgaaaacagcttatag 9174814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 13736306 - 13736386
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| |||||  |||||||||| ||||| | |  |||||||||||||||| ||||||| | || |||||||||| |||||    
T  13736306 agctgttttcaagttattttcataagctctctagtatagcttatgaaaacagcttatagctgatgtgaaaatagtttgact 13736386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 16503403 - 16503343
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatg 369  Q
    ||||||||||||||||| | ||| ||| |||| ||||||| || ||||||||| |||||||    
T  16503403 tttcagcttattttcataacctctccaagataacttatgagaagaacttatagcttatatg 16503343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 25800852 - 25800816
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  25800852 gatagcttatgaaaacagcttatagcttatatgaaaa 25800816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 472
Target Start/End: Complemental strand, 26671323 - 26671295
Alignment:
Q  444 taagttgtttatccaaacagggccaaagt 472  Q
    |||||||||||||||||||||||||||||    
T  26671323 taagttgtttatccaaacagggccaaagt 26671295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 29316794 - 29316858
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| ||| || || ||| ||||||| ||||||||| ||||||| |||| ||||||    
T  29316794 tttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaa 29316858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 381
Target Start/End: Complemental strand, 32694235 - 32694191
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaatagtctga 381  Q
    ||||||||||| ||||||||||||  |||||| ||||||||||||    
T  32694235 gatagcttatgcaaacaacttataaattatataaaaatagtctga 32694191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 369
Target Start/End: Complemental strand, 34926987 - 34926955
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatg 369  Q
    ||||||||||||||||||||||||| |||||||    
T  34926987 gatagcttatgaaaacaacttatagcttatatg 34926955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 41875676 - 41875736
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||| | ||||| ||| ||||||||||||||||| |||| || ||||| |||||    
T  41875676 agcttattttcttaagctcaccaagatagcttatgaaaacagcttacagcttatacgaaaa 41875736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 43205360 - 43205296
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||| ||| ||||| || ||||||||||||||||||  |||||  |||||||||||    
T  43205360 tttcaacttatttccataagctctccgtgatagcttatgaaaacagattatatcttatatgaaaa 43205296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 477
Target Start/End: Complemental strand, 44443231 - 44443199
Alignment:
Q  445 aagttgtttatccaaacagggccaaagtgatat 477  Q
    ||||||||||||||||||||||| |||||||||    
T  44443231 aagttgtttatccaaacagggcctaagtgatat 44443199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 8e-19; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 2568705 - 2568645
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  2568705 agcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacgaaaa 2568645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 41016230 - 41016166
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| ||||  ||||||| |||| |||||||||||||||| |||||||||||    
T  41016230 tttcagcttattttcataagctttccatgatggcttgtgaaaacaacttatagcttatatgaaaa 41016166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 5284467 - 5284518
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  5284467 tttcagcttattttcattagctcttcatgatagcctatgaaaacaacttata 5284518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 373
Target Start/End: Complemental strand, 34245770 - 34245711
Alignment:
Q  314 gcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||| |||||| ||||    
T  34245770 gcttattttcatcagctctccatgatagcttataaaaacaacttatagcttatattaaaa 34245711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 37588373 - 37588443
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||||| ||| ||||| |||  ||| |||||||||||||||||||| |||||||||||    
T  37588373 agctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaa 37588443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 3255765 - 3255805
Alignment:
Q  424 ttatgctgtaaacttcaaaataagttgtttatccaaacagg 464  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  3255765 ttatgctataaacttcaaaataagttgtttatccaaacagg 3255805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 10272450 - 10272514
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| | ||| ||| ||| ||||||||||||||||||||| ||||| |||||    
T  10272450 tttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaa 10272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 32172704 - 32172644
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatg 369  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||| ||||||| |||||||    
T  32172704 tttcagcttatttccattagttcttcatgatagcttatgaaaacagcttatagcttatatg 32172644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 37690649 - 37690720
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagctt-atgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||||| ||| ||||| |||| ||| ||| ||||||||||||||||| |||||||||||    
T  37690649 agctgttttcagcttatttccataagctctccataataactttatgaaaacaacttatagcttatatgaaaa 37690720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 34975415 - 34975357
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||||||||||| ||||||||| ||| ||||||||| |||||||| |||||| |||||    
T  34975415 tttcagcttatttccattagctctccaggatagcttacgaaaacaatttatagcttata 34975357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 37526212 - 37526282
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||||| ||| ||||| |||  | | |||||||||||||||||||| |||||||||||    
T  37526212 agctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttatagcttatatgaaaa 37526282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 39257424 - 39257470
Alignment:
Q  327 agctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  39257424 agctctccatgattgcttatgaaaacaacttatagtttatatgaaaa 39257470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 4014437 - 4014493
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttat 359  Q
    ||||| ||||||||||||||||| || || ||| ||||||||||||||||| |||||    
T  4014437 agctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttat 4014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 15309012 - 15309076
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||| || || | ||||||||| ||||||||||||||||| ||||| |||||    
T  15309012 tttcatcttattttcataagatctcaatgatagctaatgaaaacaacttatagcttataagaaaa 15309076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 17258896 - 17258976
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| ||||||||||||||||| |||||  || ||||| ||||||||||| ||||| | || || ||||||||| |||||    
T  17258896 agctgttttcagcttattttcataagctcttcaggatagtttatgaaaacagcttattgattgtacgaaaatagtttgact 17258976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 17368727 - 17368675
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||||||||||| ||| | ||| ||| |||||||||||||||||||||||||    
T  17368727 tttcagcttatttccataacctctccaagatagcttatgaaaacaacttatag 17368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 18543216 - 18543279
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||  |||||| ||||    
T  18543216 tttcagcttattt-cataagctctccaggatagcttatgaaaacaacttatatcttatataaaaa 18543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 34117565 - 34117621
Alignment:
Q  319 ttttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||||| ||||| ||| |||||||||||||| |||||||||| ||||||| |||||    
T  34117565 ttttcataagctctccaagatagcttatgaaagcaacttatagcttatatgtaaata 34117621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 373
Target Start/End: Complemental strand, 7319460 - 7319393
Alignment:
Q  306 tgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| || || || ||| ||||||||| |||||||  |||||| |||||||||||    
T  7319460 tgctttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaa 7319393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 11105055 - 11104980
Alignment:
Q  229 gtttggattgacttattcgagcttagctaccagcagaagcacttgtgatattgtttgacagaacatataaaaacag 304  Q
    ||||||||||| ||||| ||||||| | ||||||| |||||||||||||| | ||||  ||||| ||| |||||||    
T  11105055 gtttggattgatttatttgagcttatcaaccagcataagcacttgtgatactatttgggagaacttatgaaaacag 11104980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 19138736 - 19138802
Alignment:
Q  309 tttcagcttattttcattagctcgccatg--atagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| ||| ||||| ||||   |||||||||||||||||||||||| |||| ||||||    
T  19138736 tttcagcttatttccataagctctccatataatagcttatgaaaacaacttatagcttatctgaaaa 19138802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 6587120 - 6587190
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| || |||||||||||||  || || |||  |||||||||||||||||||||||| ||||| |||||    
T  6587120 agctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatagcttatacgaaaa 6587190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 376
Target Start/End: Original strand, 18704084 - 18704122
Alignment:
Q  338 atagcttatgaaaacaacttataggttatatgaaaatag 376  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  18704084 atagcttatgaaaacaacttatagcttatataaaaatag 18704122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 28777038 - 28776992
Alignment:
Q  315 cttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    |||||||||||||| || ||| ||||||||||||||||| |||||||    
T  28777038 cttattttcattagttctccaagatagcttatgaaaacagcttatag 28776992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 34205262 - 34205224
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  34205262 gatagcttatgaaaacaacttatagcttatataaaaata 34205224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 43300929 - 43300871
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||||||||||||||| || || ||| |||||||||  ||||||||||||||| ||||    
T  43300929 tttcagcttattttcataagttctccaagatagcttacaaaaacaacttataggatata 43300871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 10125737 - 10125786
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaactta 358  Q
    ||||||||||||||||| ||||| ||||| || |||||||||| ||||||    
T  10125737 tttcagcttattttcataagctctccatggtaacttatgaaaataactta 10125786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 31030149 - 31030210
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatga 370  Q
    ||||||||||||| ||| ||||| ||| || |||||| |||||| |||||||| ||||||||    
T  31030149 tttcagcttatttccataagctctccaggacagcttaggaaaactacttatagcttatatga 31030210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 40205093 - 40205142
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaactta 358  Q
    |||||||||||||  || ||||| ||| ||||||||||||||||||||||    
T  40205093 tttcagcttatttctataagctctccaggatagcttatgaaaacaactta 40205142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 375
Target Start/End: Complemental strand, 9634805 - 9634757
Alignment:
Q  327 agctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    |||||||||  |||||||||||||||||||||||   ||||||||||||    
T  9634805 agctcgccaaaatagcttatgaaaacaacttataacatatatgaaaata 9634757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 10771809 - 10771865
Alignment:
Q  230 tttggattgacttattcgagcttagctaccagcagaagcacttgtgatattgtttga 286  Q
    ||||||||| |||||| ||||||| ||||  ||| |||||||||||| |||||||||    
T  10771809 tttggattggcttatttgagcttatctactggcataagcacttgtgagattgtttga 10771865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 12425622 - 12425558
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||| || || ||| |||||||| |||||||| ||||||| ||||| |||||    
T  12425622 tttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaa 12425558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 13604868 - 13604932
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||| |||||  || |||| |||||||||||| |||| || |||||||||||    
T  13604868 tttcaacttattttcataagctcttcaagataacttatgaaaacagcttaaagtttatatgaaaa 13604932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 14295539 - 14295483
Alignment:
Q  327 agctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| ||| ||||||||| ||||||| ||||||| ||||||||||| ||| |||||    
T  14295539 agctctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgact 14295483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 467
Target Start/End: Complemental strand, 26796366 - 26796338
Alignment:
Q  439 caaaataagttgtttatccaaacagggcc 467  Q
    |||||||||||||||||||||||||||||    
T  26796366 caaaataagttgtttatccaaacagggcc 26796338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 467
Target Start/End: Complemental strand, 26799884 - 26799856
Alignment:
Q  439 caaaataagttgtttatccaaacagggcc 467  Q
    |||||||||||||||||||||||||||||    
T  26799884 caaaataagttgtttatccaaacagggcc 26799856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 467
Target Start/End: Complemental strand, 26807434 - 26807406
Alignment:
Q  439 caaaataagttgtttatccaaacagggcc 467  Q
    |||||||||||||||||||||||||||||    
T  26807434 caaaataagttgtttatccaaacagggcc 26807406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 29054952 - 29054896
Alignment:
Q  316 ttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaa 372  Q
    |||||| ||| |||||  |||||||| ||||| ||||||||||||| ||||||||||    
T  29054952 ttatttccataagctctacatgatagtttatggaaacaacttatagcttatatgaaa 29054896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 467
Target Start/End: Original strand, 38105030 - 38105058
Alignment:
Q  439 caaaataagttgtttatccaaacagggcc 467  Q
    |||||||||||||||||||||||||||||    
T  38105030 caaaataagttgtttatccaaacagggcc 38105058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 39105511 - 39105451
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| || || ||| |||||||||||||||||  |||||| ||||| |||||    
T  39105511 agcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaa 39105451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 360
Target Start/End: Complemental strand, 51130804 - 51130750
Alignment:
Q  306 tgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  51130804 tgctttcagcttattttcaatagctctccatgatagcttatgaaaacaccttata 51130750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 21367724 - 21367654
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||||||||| || || ||| ||||||||||||||||||||||||  ||||| |||||    
T  21367724 agctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaa 21367654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 14548735 - 14548804
Alignment:
Q  304 gctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||| ||||||||||||| ||| ||||| |||  ||| |||||||||||||||||||| |||||||||||    
T  14548735 gctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaa 14548804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 22214706 - 22214742
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||||||||||||||||||||||||||||||||    
T  22214706 gatagcttatgaaaacaacttataggttatatgaaaa 22214742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 43875681 - 43875625
Alignment:
Q  327 agctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| || ||| |||||    
T  43875681 agctctccatgatagcttatgaaaacaacttatagcttatatgagaacagtttgact 43875625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 19679783 - 19679853
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||||||  || |||||| |||||||| ||||||||||||| ||||| ||||||||||| ||| |||||    
T  19679783 agcttatttctatcagctcggcatgatagtttatgaaaacaacctatagcttatatgaaaacagtatgact 19679853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 25075117 - 25075059
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    |||||||||||||||||||| || | ||||||||||||||||| | |||||| ||||||    
T  25075117 tttcagcttattttcattagttctctatgatagcttatgaaaagagcttataagttata 25075059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 48807759 - 48807685
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||||||||||||| | |||| | |  ||| |||||||||||||||||||| || |||||||||||| |||||    
T  48807759 tttcagcttattttcactggctctctagaataacttatgaaaacaacttatagcttctatgaaaatagtttgact 48807685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 51510216 - 51510278
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||||||| ||| ||||| ||| |||| |||||||||||||||||||| |||||| ||||||    
T  51510216 agcttatttccataagctctccacgataacttatgaaaacaacttatagtttatatcaaaata 51510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 27792923 - 27792850
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgac 382  Q
    |||||||||||||  || |||||  |||||||| |||||||||||||||  || ||||||||||||||| ||||    
T  27792923 tttcagcttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaaatagtttgac 27792850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 47904084 - 47904149
Alignment:
Q  311 tcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatag 376  Q
    ||||||||||| | | |||||  || |||||||||||||||| |||||||| ||||||||||||||    
T  47904084 tcagcttatttccgtaagctcttcacgatagcttatgaaaaccacttatagattatatgaaaatag 47904149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 360
Target Start/End: Complemental strand, 1816639 - 1816583
Alignment:
Q  304 gctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    |||| |||||||||||||| || ||||| |||  |||||||||||||||||||||||    
T  1816639 gctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttata 1816583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 20502087 - 20502151
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||||||| |||| |||||  || ||||||||||||||||| |||||||  ||||||||||    
T  20502087 tttcagcttattctcataagctcttcaggatagcttatgaaaacagcttatagcgtatatgaaaa 20502151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 24280762 - 24280710
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||| ||||||||||| ||||| |||||||||||||||| |||| |||||||    
T  24280762 tttcaacttattttcataagctctccatgatagcttatgacaacagcttatag 24280710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 30573927 - 30573991
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||| ||||||||||| ||||| ||||| ||| ||||||||||||||||| | ||||| |||||    
T  30573927 agctgttttcagcttatgttcatcagctctccaagatagcttatgaaaacatcatatagattata 30573991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 53789480 - 53789532
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    |||||||||| |||||| || || |||||||||||||||| ||||||||||||    
T  53789480 tttcagcttaatttcataagttctccatgatagcttatgataacaacttatag 53789532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 1125782 - 1125849
Alignment:
Q  306 tgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| || ||| ||||| ||| |||| |||| |||||||| |||||| |||||||||||    
T  1125782 tgctttcagcttacttccataagctctccaagataacttaagaaaacaagttatagcttatatgaaaa 1125849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 22203474 - 22203423
Alignment:
Q  316 ttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    |||||||||| || || ||| ||||||||||||||||||||||||| |||||    
T  22203474 ttattttcataagttctccaagatagcttatgaaaacaacttatagattata 22203423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 376
Target Start/End: Original strand, 25183031 - 25183074
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaaatag 376  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||    
T  25183031 ccatgatagcttatgaaaacagcttatagctcatatgaaaatag 25183074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 34610825 - 34610876
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    |||||||| |||||||| || |||||| |||||||||||||| |||||||||    
T  34610825 tttcagctgattttcataagttcgccaagatagcttatgaaagcaacttata 34610876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 41057060 - 41057025
Alignment:
Q  338 atagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||||||||||||||||||| |||||||||||    
T  41057060 atagcttatgaaaacaacttatagcttatatgaaaa 41057025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 368
Target Start/End: Complemental strand, 43115107 - 43115048
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatat 368  Q
    ||||||||||||| ||| ||||| | ||||||| | ||||||||||||||||| ||||||    
T  43115107 tttcagcttatttccataagctctcaatgatagttcatgaaaacaacttatagcttatat 43115048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 24887302 - 24887364
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaa 371  Q
    ||||||||||||  ||| ||||| ||| ||||||||||||||||| ||| ||| |||||||||    
T  24887302 tttcagcttattcccataagctctccaggatagcttatgaaaacagcttttagcttatatgaa 24887364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 25453878 - 25453952
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||| ||||  ||| ||||| ||||||||| |  |||||||||||| ||||| ||| |||||    
T  25453878 tttcagcttattttcataagctttccaggatagtttatgaaaataggttataggttatacgaaaacagtttgact 25453952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 44747421 - 44747479
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    |||| |||||||||||||||||| || |  ||| ||||||||||||||||| |||||||    
T  44747421 agcttctttcagcttattttcataagttttccaagatagcttatgaaaacagcttatag 44747479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 2825194 - 2825149
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaactta 358  Q
    ||||||||||||| ||||| ||| ||||||||||||||| ||||||    
T  2825194 agcttattttcataagctctccaagatagcttatgaaaataactta 2825149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 20669229 - 20669172
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||| |||| |||||||| ||| ||||| ||| ||||||||||||||||| ||||||    
T  20669229 agctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 24235731 - 24235776
Alignment:
Q  338 atagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||||||||||||||||||||| ||||||  ||||||| |||||    
T  24235731 atagcttatgaaaacaacttatagcttatattcaaatagtttgact 24235776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 383
Target Start/End: Complemental strand, 31723188 - 31723139
Alignment:
Q  334 catgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||| ||||||||||||||  ||||| |||| |||||||||    
T  31723188 catgatagcttattaaaacaacttatagcgtatattaaaacagtctgact 31723139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 37138298 - 37138241
Alignment:
Q  406 taacttattcataagagattatgctgtaaacttcaaaataagttgtttatccaaacag 463  Q
    |||||||| ||||||   ||||||| ||| ||||||| ||||||||||||||||||||    
T  37138298 taacttatacataagcacttatgctataagcttcaaattaagttgtttatccaaacag 37138241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 375
Target Start/End: Complemental strand, 37788882 - 37788845
Alignment:
Q  338 atagcttatgaaaacaacttataggttatatgaaaata 375  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  37788882 atagcttatgaaaacaacttatagattatacgaaaata 37788845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 40665486 - 40665429
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||| |||||||||||||| || ||||| ||| |||| |||||||||||| ||||||    
T  40665486 agctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttata 40665429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 44295677 - 44295604
Alignment:
Q  229 gtttggattgacttattcgagcttagctaccagcagaagcacttgtgatattgtttgacagaacatataaaaac 302  Q
    |||| ||||||||| || ||||||| |||| |||| |||||||||||||| | ||||| ||||| ||| |||||    
T  44295677 gtttagattgacttgtttgagcttatctacaagcataagcacttgtgatactatttgagagaacttatgaaaac 44295604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 54775184 - 54775127
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||||| ||||||||||| | ||| |||||||| |||| ||||||| ||||||    
T  54775184 agctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttata 54775127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 467
Target Start/End: Complemental strand, 9995878 - 9995850
Alignment:
Q  439 caaaataagttgtttatccaaacagggcc 467  Q
    |||||||||||||||||||||||||||||    
T  9995878 caaaataagttgtttatccaaacagggcc 9995850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 467
Target Start/End: Complemental strand, 10131564 - 10131536
Alignment:
Q  439 caaaataagttgtttatccaaacagggcc 467  Q
    |||||||||||||||||||||||||||||    
T  10131564 caaaataagttgtttatccaaacagggcc 10131536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 467
Target Start/End: Complemental strand, 10216895 - 10216867
Alignment:
Q  439 caaaataagttgtttatccaaacagggcc 467  Q
    |||||||||||||||||||||||||||||    
T  10216895 caaaataagttgtttatccaaacagggcc 10216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 467
Target Start/End: Complemental strand, 10220414 - 10220386
Alignment:
Q  439 caaaataagttgtttatccaaacagggcc 467  Q
    |||||||||||||||||||||||||||||    
T  10220414 caaaataagttgtttatccaaacagggcc 10220386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 18405854 - 18405902
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    |||||| |||||| || || ||| |||||||||||||||||||||||||    
T  18405854 agcttaatttcataagttctccaagatagcttatgaaaacaacttatag 18405902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 20874351 - 20874387
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  20874351 gatagcttatgaaaacagcttatagtttatatgaaaa 20874387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 21872318 - 21872354
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  21872318 gatagcttatgaaaacaacttatagcttatatcaaaa 21872354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 24774679 - 24774639
Alignment:
Q  335 atgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||||||||||||||||||||||||| | |||||| ||||    
T  24774679 atgatagcttatgaaaacaacttatagttaatatgacaata 24774639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 25459550 - 25459606
Alignment:
Q  229 gtttggattgacttattcgagcttagctaccagcagaagcacttgtgatattgtttg 285  Q
    ||||||||||| ||||| ||||||| | || |||| |||||||||||| ||||||||    
T  25459550 gtttggattgatttatttgagcttatcaactagcataagcacttgtgagattgtttg 25459606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 33405214 - 33405250
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  33405214 gatagcttatgaaaacagcttatagcttatatgaaaa 33405250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 35708344 - 35708296
Alignment:
Q  335 atgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||| |||||||||||||||||  ||||||||||||| ||| |||||    
T  35708344 atgataacttatgaaaacaacttaagggttatatgaaaacagtatgact 35708296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 35972040 - 35972108
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    ||||||||||||||||| ||||||| ||||| ||||||| ||| |   ||||  |||||||||||||||    
T  35972040 tttcagcttattttcataagctcgcaatgattgcttatggaaatagtctataacttatatgaaaatagt 35972108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 7714299 - 7714229
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||| ||||||||||| ||||| ||| ||||||| ||||||||||||||||| | |||||||||    
T  7714299 agctgttttcaacttattttcatgagctctccaagatagctcatgaaaacaacttatagttgatatgaaaa 7714229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 10075564 - 10075644
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||| ||||||||||||| ||||| | | ||||||||||||||| | ||||||  |||||| |||||||| |||||    
T  10075564 agctgcttttagcttattttcataagctctctaggatagcttatgaaaatagcttataacttatataaaaatagtttgact 10075644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 27028882 - 27028830
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||    
T  27028882 tttcagcttattttcataagctctccaagatagcttatgaaaacagcttatag 27028830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 31862550 - 31862470
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| ||||||||||||||||| ||||| | | |||| |||||||||||| ||||||| ||||| || |||||| |||||    
T  31862550 agctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatacgagaatagtttgact 31862470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 467
Target Start/End: Original strand, 34522160 - 34522235
Alignment:
Q  392 ttgtgtcacagaagtaacttattcataagagattatgctgtaaacttcaaaataagttgtttatccaaacagggcc 467  Q
    |||||||| |||| || |||||||||||| | |||||||||||  | ||||||||||| |||||||||||| ||||    
T  34522160 ttgtgtcatagaaatagcttattcataagcgcttatgctgtaagttgcaaaataagttttttatccaaacatggcc 34522235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 11795143 - 11795069
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||| || ||||||  ||||||||||| ||| |||||    
T  11795143 tttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgact 11795069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 28769358 - 28769432
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||| ||| | ||| |||  |||||||||||||||| ||||||| ||||| ||||||||| |||||    
T  28769358 tttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgact 28769432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 29973104 - 29973058
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||||||||||| |||| |||||||||| |||||    
T  29973104 gatagcttatgaaaacaacttatagcttatgtgaaaatagtttgact 29973058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 30013269 - 30013195
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||| |||||| ||  || ||||||||||||||||| ||||||| ||||||| ||| ||| |||||    
T  30013269 tttcagcttatttccattagttctacaggatagcttatgaaaacagcttatagcttatatggaaacagtttgact 30013195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 39561554 - 39561624
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||||| ||| ||||   |||||||||||| ||||||||||||||| ||| |||||||    
T  39561554 agctgttttcagcttatttccataagcttttcatgatagcttacgaaaacaacttatagtttagatgaaaa 39561624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 383
Target Start/End: Complemental strand, 10460629 - 10460580
Alignment:
Q  334 catgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||||| |||||||| || |||||||||||| |||||    
T  10460629 catgatagcttatgaaaaccacttatagcttgtatgaaaatagtttgact 10460580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 375
Target Start/End: Complemental strand, 24558903 - 24558838
Alignment:
Q  310 ttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    |||| ||||||| |||||  || ||| ||||||||||||||||||||||||| ||||| |||||||    
T  24558903 ttcaacttatttacattaagtctccaagatagcttatgaaaacaacttatagcttatacgaaaata 24558838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 375
Target Start/End: Complemental strand, 27754454 - 27754389
Alignment:
Q  310 ttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    |||||||||||||||| ||||| |||  ||||||||||||||| |||||||| | | |||||||||    
T  27754454 ttcagcttattttcataagctctccaaaatagcttatgaaaaccacttatagttaacatgaaaata 27754389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 35869876 - 35869823
Alignment:
Q  321 ttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaat 374  Q
    ||||||||||  |||  |||||||||||||||||||||||| ||||||||||||    
T  35869876 ttcattagctatccacaatagcttatgaaaacaacttatagcttatatgaaaat 35869823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 9834836 - 9834872
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||||||||||| |||||||||||    
T  9834836 gatagcttatgaaaacaacttatagcttatatgaaaa 9834872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 9956833 - 9956897
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| || || ||| ||||| ||||||||||||||||||  ||||| |||||    
T  9956833 tttcagcttattttcataagttctccaagatagattatgaaaacaacttataacttataggaaaa 9956897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 351
Target Start/End: Complemental strand, 11494203 - 11494155
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaa 351  Q
    ||||||||||||||||||||||| |||||  || |||||||||||||||    
T  11494203 agctgctttcagcttattttcataagctcttcaagatagcttatgaaaa 11494155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 31884621 - 31884581
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  31884621 ccatgatagcttatgaaaacaatttatagcttatatgaaaa 31884581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 368
Target Start/End: Original strand, 35298515 - 35298555
Alignment:
Q  328 gctcgccatgatagcttatgaaaacaacttataggttatat 368  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  35298515 gctcaccatgatagcttatgaaaacaacttatagtttatat 35298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 6526172 - 6526235
Alignment:
Q  229 gtttggattgacttattcgagcttagctaccagcagaagcacttgtgatattgtttgacagaac 292  Q
    |||||||||||||||||||||| || ||||  ||| |||| ||||||| ||||||||| |||||    
T  6526172 gtttggattgacttattcgagcctatctactggcataagcccttgtgagattgtttgagagaac 6526235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 11569476 - 11569527
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||||||||||  | ||| ||||||||||||||||||||| ||||||    
T  11569476 tttcagcttattttcaaaatctctccatgatagcttatgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 5227582 - 5227516
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtct 379  Q
    ||||||||||||| |||||  ||||||||||||  |||||| ||||||| |||||| |||| |||||    
T  5227582 agcttattttcataagctcttcatgatagcttacaaaaacagcttatagcttatattaaaacagtct 5227516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 6864478 - 6864552
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||| |   ||||| |||  |||||||||||||||||||||||  ||| ||||||||||| |||||    
T  6864478 tttcagcttatttcctcaagctctccaaaatagcttatgaaaacaacttataacttacatgaaaatagtttgact 6864552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 12361249 - 12361179
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||| ||||||| ||||||||| ||   ||| |||||||||||| ||||||| |||||||||||    
T  12361249 agctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaa 12361179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 20672807 - 20672757
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaaca 353  Q
    ||||| ||||||||||||||||| ||||| ||| |||||||||| ||||||    
T  20672807 agctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 27728068 - 27728114
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||||||||||||||||| |||  ||||||||||||||| |||||    
T  27728068 gatagcttatgaaaacaactaatactttatatgaaaatagtttgact 27728114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 39881771 - 39881821
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttat 359  Q
    ||||||||||||| ||| ||||| |||||||||||||| ||||||| ||||    
T  39881771 tttcagcttatttccataagctctccatgatagcttataaaaacaatttat 39881821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 1930092 - 1930035
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||| ||||||||||||||||  || || ||| ||||||||||||||||| ||||||    
T  1930092 agctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaacagcttata 1930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 2235583 - 2235648
Alignment:
Q  236 ttgacttattcgagcttagctaccagcagaagcacttgtgatattgtttgacagaacatataaaaa 301  Q
    |||||||||||||||||| ||||||||| ||||| |||||| | |||||  || ||||||| ||||    
T  2235583 ttgacttattcgagcttacctaccagcataagcatttgtgacagtgtttagcaaaacatatgaaaa 2235648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 8062572 - 8062511
Alignment:
Q  312 cagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||||||||| | ||| | | |||||||||||| |||| ||||||| |||||||||||    
T  8062572 cagcttattttcataaactctctaagatagcttatgagaacatcttatagcttatatgaaaa 8062511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 375
Target Start/End: Complemental strand, 12132886 - 12132818
Alignment:
Q  309 tttcagcttattttcattagctcg--ccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||| ||||||||||| |||| |  ||| |||| |||||||||||| ||||||| |||||||||||||    
T  12132886 tttcaacttattttcataagcttgaaccaggataacttatgaaaacagcttatagcttatatgaaaata 12132818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 372
Target Start/End: Complemental strand, 31705142 - 31705073
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaa 372  Q
    ||||| ||||||||||||| ||| | ||| | | || |||||||||||||| ||||||| ||||||||||    
T  31705142 agctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttatatgaaa 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 43704430 - 43704471
Alignment:
Q  342 cttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||||||||||||||||| ||||||||||| ||| |||||    
T  43704430 cttatgaaaacaacttatagtttatatgaaaacagtttgact 43704471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 1433599 - 1433531
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    ||||| ||||||||||| ||||| ||| ||||||||||||||||  |||| || ||| || ||||||||    
T  1433599 tttcaacttattttcataagctctccaggatagcttatgaaaactgcttaaagcttaaataaaaatagt 1433531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 357
Target Start/End: Complemental strand, 4762560 - 4762512
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaactt 357  Q
    ||||||||||||| ||| |||||  || |||||||||||||||||||||    
T  4762560 tttcagcttatttacataagctcttcaagatagcttatgaaaacaactt 4762512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 7646029 - 7645965
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| ||| ||||   || | ||||||||||||||||||||||| ||| |||||||    
T  7646029 tttcagcttatttccataagctttacaggttagcttatgaaaacaacttatagcttacatgaaaa 7645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 7918792 - 7918844
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||||||||||| ||  |||||  || |||||||||||||||||||||||||    
T  7918792 tttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatag 7918844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 11056714 - 11056754
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    ||||| || |||||||||||||||| |||||||||||||||    
T  11056714 gataggttttgaaaacaacttatagcttatatgaaaatagt 11056754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 34770915 - 34770879
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  34770915 gatagcttatgaaaacaacttatagcttaaatgaaaa 34770879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 39551234 - 39551290
Alignment:
Q  315 cttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaa 371  Q
    |||||||| || ||||| ||| || |||||||||||||||||||||| || ||||||    
T  39551234 cttatttttataagctctccaggaaagcttatgaaaacaacttatagcttgtatgaa 39551290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 43709316 - 43709272
Alignment:
Q  317 tattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||||||| ||||| ||| ||||||| |||||||||||||||||    
T  43709316 tattttcataagctctccaggatagctcatgaaaacaacttatag 43709272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 44236842 - 44236886
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaaca 353  Q
    ||||||||||||||||| ||||| |||  ||||||||||||||||    
T  44236842 tttcagcttattttcataagctctccaatatagcttatgaaaaca 44236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 5623188 - 5623143
Alignment:
Q  328 gctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  5623188 gctcaccatgatagcttatgaaaacaacttatagtttatatgaaaa 5623143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 377
Target Start/End: Complemental strand, 1403023 - 1402979
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  1403023 ccatgatagcttatgaaaacaatttatagcttatatgaaaatagt 1402979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 2117460 - 2117380
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| ||| |||||||||  || ||||| | | |||| |||||||||||||||||||| ||||||||||||||| |||||    
T  2117460 agctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaaatagtttgact 2117380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 28088245 - 28088305
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||| ||| ||||| |||||||||||||||||||||  |||||| |||||||||||    
T  28088245 agcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaa 28088305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 31812036 - 31812083
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  31812036 agcttattttcataagctctccaagatagcttatgaaaacaacttata 31812083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 4246467 - 4246397
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||| |||||||| ||  |||| |||| |||||||||||||||| ||||||| |||||||||||    
T  4246467 agctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttatagattatatgaaaa 4246397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 8364989 - 8365039
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaaca 353  Q
    ||||| ||||||||||||||||| || || |||||||||||||||||||||    
T  8364989 agctgttttcagcttattttcatcagttcaccatgatagcttatgaaaaca 8365039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 2027450 - 2027499
Alignment:
Q  334 catgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||| |||||||||| |||| ||||||||||||||||||||||| |||||    
T  2027450 catgctagcttatgagaacagcttataggttatatgaaaatagtttgact 2027499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 281867 - 281931
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| ||| ||||| | | ||||||||||||| ||| ||||||| |||||||||||    
T  281867 tttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagcttatatgaaaa 281931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 1275200 - 1275136
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| ||| ||||| ||| |||| | |||||||||| ||||||| |||||||||||    
T  1275200 tttcagcttatttccataagctctccaggataacatatgaaaacagcttatagcttatatgaaaa 1275136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 1401158 - 1401102
Alignment:
Q  311 tcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||||||| | ||| ||||| ||||||||||||||||||||| ||||||| |||||    
T  1401158 tcagcttatctccataagctctccatgatagcttatgaaaacagcttatagcttata 1401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 3155232 - 3155153
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| ||||||||||||| ||| ||||| ||| |||| |||||||||| | ||||||||||||||| ||| ||| |||||    
T  3155232 agctgttttcagcttatttccat-agctctccaggatatcttatgaaaatagcttataggttatatggaaacagtttgact 3155153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 4006765 - 4006701
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| | ||| |   ||||||||||||||||||||||||| |||||| ||||    
T  4006765 tttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaa 4006701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 24838780 - 24838828
Alignment:
Q  327 agctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||| |||||||||||||||||| || ||||||| |||||||||||||    
T  24838780 agctctccatgatagcttatgaaatcagcttatagcttatatgaaaata 24838828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 31776288 - 31776344
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttat 359  Q
    ||||| |||| || ||||| ||||||||| |||| ||||||||||||||||||||||    
T  31776288 agctgttttcggcgtatttccattagctctccattatagcttatgaaaacaacttat 31776344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 32386582 - 32386646
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| ||||| ||| |||| || ||||||||||| ||||  |||||||||||    
T  32386582 tttcagcttattttcataagctctccaggataactaatgaaaacaacgtataccttatatgaaaa 32386646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 372
Target Start/End: Complemental strand, 13907636 - 13907573
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaa 372  Q
    |||||| |||||||||| |  || ||| ||| ||||||||||||||||||||||||||| ||||    
T  13907636 tttcagtttattttcataatttctccaagatggcttatgaaaacaacttataggttatacgaaa 13907573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 103479 - 103433
Alignment:
Q  312 cagcttattttcattagctcgccatgatagcttatgaaaacaactta 358  Q
    |||||| |||||||||| || ||| ||||||||||||||||||||||    
T  103479 cagcttgttttcattagatctccaggatagcttatgaaaacaactta 103433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 7946025 - 7946067
Alignment:
Q  424 ttatgctgtaaacttcaaaataagttgtttatccaaacagggc 466  Q
    ||||||| ||| || ||||||||||||||||||||||||||||    
T  7946025 ttatgctataagctacaaaataagttgtttatccaaacagggc 7946067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 12230412 - 12230354
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||||||||||||||| ||||| |||||||||||| ||| ||||  |||||| |||||    
T  12230412 tttcagcttattttcataagctctccatgatagcttttgataacagattatagcttata 12230354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 2734990 - 2734949
Alignment:
Q  424 ttatgctgtaaacttcaaaataagttgtttatccaaacaggg 465  Q
    ||||||| ||||||||||| |||| |||||||||||||||||    
T  2734990 ttatgctctaaacttcaaattaagctgtttatccaaacaggg 2734949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 5329030 - 5328973
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||||| ||||||||||| | ||| |||||||| |||| ||||||| ||||||    
T  5329030 agctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttata 5328973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 5977074 - 5977005
Alignment:
Q  234 gattgacttattcgagcttagctaccagcagaagcacttgtgatattgtttgacagaacatataaaaaca 303  Q
    |||||||||||||||||||| |||| |||| ||||| ||||||| |||| ||| || || ||| ||||||    
T  5977074 gattgacttattcgagcttatctactagcataagcatttgtgattttgtctgagagcacttatgaaaaca 5977005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 7485118 - 7485151
Alignment:
Q  340 agcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||||||||||||||||| |||||||||||    
T  7485118 agcttatgaaaacaacttatagcttatatgaaaa 7485151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 835268 - 835320
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||||||||||||||| || || ||| ||||||||||||||||  |||||||    
T  835268 tttcagcttattttcataagttctccaagatagcttatgaaaactgcttatag 835320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 837235 - 837287
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||||||||||||||| || || ||| ||||||| |||||||| ||||||||    
T  837235 tttcagcttattttcataagttctccaagatagctaatgaaaactacttatag 837287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 2205610 - 2205654
Alignment:
Q  310 ttcagcttattttcattagctcgccatgatagcttatgaaaacaa 354  Q
    |||||||||||| ||| ||||| ||| ||||||||||||||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaacaa 2205654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 31671093 - 31671157
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| ||||  | | ||||| ||| ||||||| ||||||| |||||||||||    
T  31671093 tttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagcttatatgaaaa 31671157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 53943657 - 53943593
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| ||| ||||| |||||| | |||||| ||||||||||||| |||||||||||    
T  53943657 tttcagcttatttccataagctctccatgacaacttatgtaaacaacttatagtttatatgaaaa 53943593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 366
Target Start/End: Complemental strand, 11802591 - 11802528
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttat 366  Q
    ||||| |||||||||||| |||| ||||| |||| |||||||||||||||||||| ||| ||||    
T  11802591 agctgttttcagcttattctcataagctctccataatagcttatgaaaacaacttgtagcttat 11802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 30207584 - 30207654
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||||| ||| | ||| | | | ||||||||||||||||||||||| |||||||||||    
T  30207584 agctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaa 30207654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 24444077 - 24444024
Alignment:
Q  321 ttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaat 374  Q
    ||||||||||  |||  |||||||||||||||||||||||| ||||||||||||    
T  24444077 ttcattagctatccacaatagcttatgaaaacaacttatagcttatatgaaaat 24444024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 2996624 - 2996560
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| |||||||||||  |||| ||| ||||||||||||||||||||||||  |||||| ||||    
T  2996624 tttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaaaa 2996560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 9841115 - 9841050
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatag 376  Q
    ||||||||||||||||  || ||  || ||||||||||||||||| ||||||| ||||||||||||||    
T  9841115 tttcagcttattttcacaagttc--caggatagcttatgaaaacatcttatagcttatatgaaaatag 9841050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 10192334 - 10192271
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||| ||||| ||| |||||||| |||||||||||||||  |||||||||||    
T  10192334 tttcaacttattttcat-agctctccaggatagcttttgaaaacaacttataacttatatgaaaa 10192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 17822888 - 17822936
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||||||||||| || || ||| |||||||||||||||||||||||||    
T  17822888 agcttattttcataagttctccaagatagcttatgaaaacaacttatag 17822936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 29778842 - 29778782
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| |||||  || | |||||||||||||||||||| || |||||||||||    
T  29778842 agcttattttcataagctcttcaaggtagcttatgaaaacaacttacagcttatatgaaaa 29778782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 2900390 - 2900327
Alignment:
Q  310 ttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| || | ||| | |||||||||| |||||||| ||||||| |||||||||||    
T  2900390 ttcagcttatttttataatctctctatgatagcttgtgaaaacagcttatagtttatatgaaaa 2900327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 361
Target Start/End: Complemental strand, 28615380 - 28615333
Alignment:
Q  314 gcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    |||||||||||| |||||  ||| ||||||||||||||||||||||||    
T  28615380 gcttattttcataagctcttcattatagcttatgaaaacaacttatag 28615333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 373
Target Start/End: Complemental strand, 42866122 - 42866055
Alignment:
Q  306 tgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||| |||||| || ||| ||||| | | ||||||||||||||||||||||||| |||||| ||||    
T  42866122 tgcttttagcttacttccataagctctcaaggatagcttatgaaaacaacttatagcttatataaaaa 42866055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 47800674 - 47800623
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||||||||||| |||||  || ||||||||||||||||| ||||||    
T  47800674 tttcagcttattttcataagctcttcaagatagcttatgaaaacagcttata 47800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 55084494 - 55084549
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaactta 358  Q
    ||||| ||||||||||||||||| ||||| | | ||||||| ||||||||||||||    
T  55084494 agctggtttcagcttattttcataagctctctaagatagctcatgaaaacaactta 55084549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Complemental strand, 927503 - 927453
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||| |||||| |||||| ||||||||||| ||| |||||    
T  927503 ccatgatagcttatgcaaacaagttatagcttatatgaaaacagtttgact 927453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 4798579 - 4798633
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaactt 357  Q
    ||||| ||| ||||||||| ||| ||||| ||| |||||||||||||||||||||    
T  4798579 agctgttttgagcttatttgcataagctctccaagatagcttatgaaaacaactt 4798633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 373
Target Start/End: Original strand, 8422860 - 8422922
Alignment:
Q  311 tcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||| ||| | ||| ||| ||||| || |||||||||||||||| |||||||||||    
T  8422860 tcagcttatttgcataaactctccaagatagattgtgaaaacaacttatagcttatatgaaaa 8422922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 32420979 - 32421025
Alignment:
Q  230 tttggattgacttattcgagcttagctaccagcagaagcacttgtga 276  Q
    |||||||||||||||| ||||||| |||| |||| ||||||||||||    
T  32420979 tttggattgacttatttgagcttacctactagcataagcacttgtga 32421025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 49202696 - 49202638
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||| |||||||||||||| |  ||| ||||||||| ||||||||||||||| |||||    
T  49202696 tttcaacttattttcattagttatccaagatagcttacgaaaacaacttatagcttata 49202638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 49219162 - 49219124
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  49219162 gatagtttatgaaaacaacttatagcttatatgaaaata 49219124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 375
Target Start/End: Complemental strand, 11842237 - 11842200
Alignment:
Q  338 atagcttatgaaaacaacttataggttatatgaaaata 375  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  11842237 atagtttatgaaaacaacttatagcttatatgaaaata 11842200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 22666848 - 22666911
Alignment:
Q  410 ttattcataagag---attatgctgtaaacttcaaaataagttgtttatccaaacagggccaaa 470  Q
    |||||||||||||   ||||| || ||| || |||||||||||||||||| |||||||||||||    
T  22666848 ttattcataagagcttattatactataatctgcaaaataagttgtttatctaaacagggccaaa 22666911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Original strand, 24160545 - 24160582
Alignment:
Q  340 agcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  24160545 agcttatgaaaacaacttatagcttacatgaaaatagt 24160582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 8468999 - 8468935
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||| |||||||||| ||||| | |  ||| ||||||||||||||| |||| |||||||||||    
T  8468999 tttcagattattttcataagctctctagaataacttatgaaaacaactaatagcttatatgaaaa 8468935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 16494842 - 16494882
Alignment:
Q  327 agctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||| ||| ||||||||||||||||||||||||| |||||    
T  16494842 agctctccaagatagcttatgaaaacaacttatagcttata 16494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 18630703 - 18630667
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||| |||||||||||||||| |||||||||||    
T  18630703 gatagcttgtgaaaacaacttatagcttatatgaaaa 18630667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 375
Target Start/End: Complemental strand, 27970091 - 27970043
Alignment:
Q  327 agctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||| |||||| ||||||||||||||| |||||  |||||||||||||    
T  27970091 agctctccatgacagcttatgaaaacaagttataacttatatgaaaata 27970043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 28423581 - 28423521
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatg 369  Q
    ||||||||||||||||| | |||  |||||||||||| ||||||||  ||||| |||||||    
T  28423581 tttcagcttattttcataaactctacatgatagcttaggaaaacaatgtatagcttatatg 28423521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 29263421 - 29263357
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| ||  |||||  || ||||||||||||||||||||||| | |||| ||||||    
T  29263421 tttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttatcgcttatttgaaaa 29263357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 30024757 - 30024705
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||||||||||||||| |||  |||  |||||||||||| ||||||||||||    
T  30024757 tttcagcttattttcataagcctgcctagatagcttatgacaacaacttatag 30024705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 32764978 - 32764934
Alignment:
Q  316 ttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    |||||||||||||||| |||||||||||||  ||| |||||||||    
T  32764978 ttattttcattagctctccatgatagcttacaaaatcaacttata 32764934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 36722692 - 36722752
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||| |||||  || |||| ||||| |||||||||||||  |||||||||||    
T  36722692 agcttattttcataagctcttcaggataacttatcaaaacaacttataacttatatgaaaa 36722752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 46090833 - 46090896
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||| ||||||||| ||||| |||||||||||| |||||| ||||| ||| || ||||||||    
T  46090833 tttcagcctattttcat-agctctccatgatagcttgtgaaaataacttctagattttatgaaaa 46090896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 47118984 - 47119048
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||| ||||| || ||  || |||||| |||||| ||||||||||| |||||||||||    
T  47118984 tttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatgaaaa 47119048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 53673677 - 53673721
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaaca 353  Q
    ||||||||||||| ||| ||||| ||| |||||||||||||||||    
T  53673677 tttcagcttatttacataagctctccaagatagcttatgaaaaca 53673721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 54325050 - 54325130
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||| |||||| |||| | ||| | ||| |||||||||||| |||||| | ||||||| ||||||||||| ||| |||||    
T  54325050 agctgttttcagtttatctccataaactctccatgatagcttttgaaaatagcttatagcttatatgaaaacagtttgact 54325130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 383
Target Start/End: Original strand, 55870390 - 55870434
Alignment:
Q  339 tagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||||||||||||||| |||| |||||| ||| |||||    
T  55870390 tagcttatgaaaacaacttatagcttatgtgaaaacagtttgact 55870434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 48917368 - 48917414
Alignment:
Q  312 cagcttattttcattagctcgccatgatagcttatgaaaacaactta 358  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  48917368 cagcttattttcataagctctccaagatagcttatgaaaacaactta 48917414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 21453345 - 21453284
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatga 370  Q
    ||||||||||| ||||||||||| | | |||||||||||||||||  |||||| ||||||||    
T  21453345 tttcagcttatcttcattagctctctaggatagcttatgaaaacagtttatagcttatatga 21453284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 383
Target Start/End: Complemental strand, 23721555 - 23721483
Alignment:
Q  311 tcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    ||||||||||| ||| ||| | | | |||||||||| |||||||||||||| ||| ||||||||||| |||||    
T  23721555 tcagcttatttccataagcgcacaaggatagcttataaaaacaacttatagtttaaatgaaaatagtttgact 23721483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 25558238 - 25558278
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  25558238 gataacttatgaaaacaacttatagcttatatgaaaatagt 25558278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 25558436 - 25558476
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  25558436 gataacttatgaaaacaacttatagcttatatgaaaatagt 25558476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 30812195 - 30812135
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||| ||| ||||| ||||||||||| ||||||||| ||||||| ||||| |||||    
T  30812195 agcttatttccataagctctccatgatagctaatgaaaacagcttatagcttatacgaaaa 30812135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 375
Target Start/End: Original strand, 40688999 - 40689071
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||| ||| ||||||||||||| || |  ||| ||||||||||||| ||| ||||||| |||||||||||||    
T  40688999 agctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaata 40689071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 44241882 - 44241842
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaatagt 377  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  44241882 gatagcttatgaaaacaacttataggttatacaaaaatagt 44241842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 47177695 - 47177623
Alignment:
Q  301 acagctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||| |||| ||||||||||||| |  || ||| |||||||| |||||||| ||||||| |||||||||||    
T  47177695 acagctacttttagcttattttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaa 47177623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 514818 - 514763
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggtt 364  Q
    |||||||||||||| |  ||||| ||| ||||||||||||||||| ||||||||||    
T  514818 tttcagcttattttgacaagctctccaggatagcttatgaaaacagcttataggtt 514763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 383
Target Start/End: Original strand, 9527140 - 9527183
Alignment:
Q  340 agcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgact 9527183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 17989049 - 17989116
Alignment:
Q  316 ttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||||||| |||||  || || ||||||||||||||| |||||| ||||||||||| ||| |||||    
T  17989049 ttattttcataagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgact 17989116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 24363620 - 24363687
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatag 376  Q
    ||||||||||||| ||| | ||| ||| ||||||||||||||||||||||||   | |||||||||||    
T  24363620 tttcagcttatttccataacctctccaggatagcttatgaaaacaacttataacctgtatgaaaatag 24363687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 377
Target Start/End: Complemental strand, 25507367 - 25507332
Alignment:
Q  342 cttatgaaaacaacttataggttatatgaaaatagt 377  Q
    |||||||||||||||||||| |||||||||||||||    
T  25507367 cttatgaaaacaacttatagcttatatgaaaatagt 25507332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 27481320 - 27481387
Alignment:
Q  316 ttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtctgact 383  Q
    |||||| ||| ||||  ||||||||||||||||||| ||||||||| ||||||| ||| ||| |||||    
T  27481320 ttatttccataagctatccatgatagcttatgaaaataacttatagcttatatggaaacagtttgact 27481387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 367
Target Start/End: Original strand, 46104589 - 46104644
Alignment:
Q  312 cagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    |||||||||||||| |||||  ||  |||||||||||||||||||||||| |||||    
T  46104589 cagcttattttcataagctcttcagcatagcttatgaaaacaacttatagcttata 46104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 20526503 - 20526445
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||| ||| |||||||||||||||| || |||  |||||||||||||||| |||||||    
T  20526503 agctgtttttagcttattttcattagttctccaaaatagcttatgaaaacagcttatag 20526445  T

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Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 375
Target Start/End: Complemental strand, 24909715 - 24909649
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaata 375  Q
    ||||||| ||||| ||  ||||| |||  ||| |||||||||||||||||||| |||||||||||||    
T  24909715 tttcagcatatttccacaagctctccacaatatcttatgaaaacaacttatagcttatatgaaaata 24909649  T

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Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 39334243 - 39334193
Alignment:
Q  310 ttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    |||||||||||| ||| ||||||||| |||||||| |||||||| ||||||    
T  39334243 ttcagcttatttccataagctcgccaggatagcttttgaaaacagcttata 39334193  T

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Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 360
Target Start/End: Complemental strand, 39360077 - 39360023
Alignment:
Q  306 tgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttata 360  Q
    ||||||||||||||||  || ||||||||| |||||||| |||||||| ||||||    
T  39360077 tgctttcagcttatttcaataagctcgccaggatagcttttgaaaacatcttata 39360023  T

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Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 39967977 - 39967919
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||| ||||| |||||||||||||| || |   |||||||||||||||||||||||||    
T  39967977 agctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatag 39967919  T

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Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 422 - 468
Target Start/End: Complemental strand, 40598507 - 40598461
Alignment:
Q  422 gattatgctgtaaacttcaaaataagttgtttatccaaacagggcca 468  Q
    ||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  40598507 gattatgctataaacttcaaattaagttgtttatacaaacaaggcca 40598461  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 30456476 - 30456533
Alignment:
Q  316 ttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||||||| ||||| ||| ||||| |||||||||| |||||||  |||||||||||    
T  30456476 ttattttcataagctctccaagatagtttatgaaaaccacttataacttatatgaaaa 30456533  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 1417291 - 1417251
Alignment:
Q  333 ccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||||||||||||| | |||||||||||    
T  1417291 ccatgctagcttatgaaaacaacttattgcttatatgaaaa 1417251  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 5628585 - 5628649
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||| ||||| |  ||||| |||||||||||| ||||||  ||| |||||||    
T  5628585 tttcagcttattttcataagctctctgtgatatcttatgaaaacagcttatatcttaaatgaaaa 5628649  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 7244731 - 7244687
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaaca 353  Q
    ||||||||||||||||| ||||| |||  ||||||||||||||||    
T  7244731 tttcagcttattttcataagctctccaatatagcttatgaaaaca 7244687  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 11208472 - 11208436
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  11208472 gatagcttatgaaaacaacatatagtttatatgaaaa 11208436  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 18350738 - 18350790
Alignment:
Q  321 ttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||| ||||||||||||||||||||| ||||||  ||||| |||||    
T  18350738 ttcataagctctccatgatagcttatgaaaacagcttataacttatacgaaaa 18350790  T

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Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 361
Target Start/End: Original strand, 20881630 - 20881707
Alignment:
Q  282 tttgacagaacatataaaaacagctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttatag 361  Q
    ||||| ||||| ||| |||||||||  ||||||||||||||||| || ||   | ||||| |||||||||||||||||||    
T  20881630 tttgagagaacttatgaaaacagct--tttcagcttattttcataagttctttaagatagtttatgaaaacaacttatag 20881707  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 27378847 - 27378911
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    |||||| |||||||||| ||||| ||| ||||| |||||||||||  || ||| |||||||||||    
T  27378847 tttcagtttattttcataagctctccaggatagtttatgaaaacagattgtagtttatatgaaaa 27378911  T

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Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 39907860 - 39907796
Alignment:
Q  303 agctgctttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttata 367  Q
    ||||| |||||||||||||||||||| || | | ||||| |||||||||||  |||||| |||||    
T  39907860 agctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttata 39907796  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 44151499 - 44151559
Alignment:
Q  309 tttcagcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatg 369  Q
    ||||||||||||| ||| ||||   || ||||| ||||||||||||||||||| |||||||    
T  44151499 tttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatg 44151559  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 6999 - 6933
Alignment:
Q  313 agcttattttcattagctcgccatgatagcttatgaaaacaacttataggttatatgaaaatagtct 379  Q
    ||||||||||||| |||||  ||||||||||||  |||||| ||||||| |||||| |||| |||||    
T  6999 agcttattttcataagctcttcatgatagcttacaaaaacagcttatagcttatattaaaacagtct 6933  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 27599 - 27563
Alignment:
Q  337 gatagcttatgaaaacaacttataggttatatgaaaa 373  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  27599 gatagtttatgaaaacaacttatagtttatatgaaaa 27563  T

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