View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11133_low_64 (Length: 221)
Name: NF11133_low_64
Description: NF11133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11133_low_64 |
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Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 53272171 - 53271980
Alignment:
| Q |
12 |
gagatgaactgcgaattctatttaaaaatagtaaataacagctgacatgcatatttataagatactacagctttacaacgtacaatcagatactacattt |
111 |
Q |
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| T |
53272171 |
gagatgaactgcgaattctatttaaaaatagtaaataacagctgacatgcatatttataagatactacagctttacaacgtacaatcagatactacattt |
53272072 |
T |
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| Q |
112 |
aatgctgaatgtaccattattactctcttcaatttgctgcatgctcgtttttattaattcatcaaattaactcttccgatttaaaggaagtt |
203 |
Q |
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| T |
53272071 |
aatgctgaatgtaccattattactctcttcaatttgttgcatgctcgtttttattaattcatcaaattaactcttccgatttaaaggaagtt |
53271980 |
T |
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