View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11133_low_67 (Length: 219)
Name: NF11133_low_67
Description: NF11133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11133_low_67 |
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Alignment Details
Target: chr8 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 43907347 - 43907529
Alignment:
| Q |
20 |
agcacattcatttttcccataacatgtatttaaattacaacattctatttgtatctattgcagagatcaacagtatgaatatgtgtattctgatgatgaa |
119 |
Q |
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| T |
43907347 |
agcacattcatttttcccataacatgtatttaaattacaacattctatttgtatctattgcagagatcaacagtatgaatatgtgtattctgatgatgaa |
43907446 |
T |
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| Q |
120 |
gaagatgaagaagacaaagaagccccagaagagtattcttgtgtccattcttctgataaggaagagcatcaaaagactcattc |
202 |
Q |
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| T |
43907447 |
gaagatgaagaagacgaagaagccccagaagagtattcttgtgtccattcttctgataaggaagagcgtcaaaggactcattc |
43907529 |
T |
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