View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11134_low_2 (Length: 704)

Name: NF11134_low_2
Description: NF11134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11134_low_2
NF11134_low_2
[»] chr6 (44 HSPs)
chr6 (39-687)||(14035769-14036400)
chr6 (547-687)||(14031171-14031311)
chr6 (550-687)||(14125782-14125919)
chr6 (407-497)||(14126038-14126127)
chr6 (324-450)||(14031435-14031556)
chr6 (94-135)||(28951394-28951435)
chr6 (92-135)||(13496109-13496152)
chr6 (92-134)||(20480657-20480699)
chr6 (93-143)||(34828300-34828350)
chr6 (93-170)||(16390423-16390499)
chr6 (94-159)||(20744133-20744197)
chr6 (94-159)||(24438284-24438348)
chr6 (92-135)||(2726442-2726485)
chr6 (90-133)||(5271384-5271427)
chr6 (93-160)||(9677229-9677295)
chr6 (104-135)||(14773007-14773038)
chr6 (92-143)||(16890466-16890516)
chr6 (92-135)||(19277567-19277610)
chr6 (96-135)||(33938704-33938743)
chr6 (93-135)||(2445293-2445335)
chr6 (93-135)||(3358385-3358427)
chr6 (93-159)||(8138460-8138525)
chr6 (93-135)||(9111041-9111083)
chr6 (93-135)||(9311955-9311997)
chr6 (93-131)||(17278964-17279002)
chr6 (93-135)||(29335600-29335642)
chr6 (93-135)||(32053782-32053824)
chr6 (93-171)||(34701141-34701218)
chr6 (94-135)||(1989068-1989108)
chr6 (96-133)||(2108722-2108759)
chr6 (94-135)||(2213292-2213333)
chr6 (94-135)||(4379510-4379551)
chr6 (86-135)||(9558435-9558484)
chr6 (90-135)||(13376303-13376348)
chr6 (91-128)||(21857083-21857120)
chr6 (104-161)||(24212539-24212595)
chr6 (99-135)||(361754-361790)
chr6 (104-136)||(4273359-4273391)
chr6 (93-133)||(4494898-4494938)
chr6 (99-143)||(9244127-9244170)
chr6 (93-133)||(9444951-9444991)
chr6 (92-128)||(10320463-10320499)
chr6 (93-133)||(18313927-18313967)
chr6 (91-159)||(27834331-27834398)
[»] chr5 (46 HSPs)
chr5 (93-172)||(40782536-40782615)
chr5 (91-135)||(18589892-18589936)
chr5 (93-140)||(31561364-31561411)
chr5 (93-157)||(27721679-27721742)
chr5 (96-135)||(26034633-26034672)
chr5 (96-143)||(32283576-32283623)
chr5 (93-135)||(29695009-29695051)
chr5 (93-130)||(14880406-14880443)
chr5 (98-135)||(16579399-16579436)
chr5 (93-134)||(33369439-33369480)
chr5 (95-135)||(5107270-5107310)
chr5 (93-133)||(11637599-11637639)
chr5 (99-135)||(31602850-31602886)
chr5 (93-128)||(2322287-2322322)
chr5 (93-172)||(6489001-6489079)
chr5 (96-135)||(13864341-13864380)
chr5 (96-135)||(17046331-17046370)
chr5 (88-171)||(18430990-18431072)
chr5 (93-132)||(22555225-22555264)
chr5 (94-133)||(22619869-22619908)
chr5 (97-159)||(3389160-3389221)
chr5 (109-155)||(5150088-5150134)
chr5 (93-135)||(10199013-10199055)
chr5 (93-131)||(10359626-10359664)
chr5 (93-135)||(12909191-12909233)
chr5 (93-135)||(18995638-18995680)
chr5 (93-135)||(22585646-22585688)
chr5 (93-143)||(24498578-24498627)
chr5 (93-135)||(33645714-33645756)
chr5 (93-135)||(37932324-37932366)
chr5 (97-135)||(41650964-41651002)
chr5 (90-135)||(8682419-8682464)
chr5 (93-134)||(12165232-12165273)
chr5 (96-133)||(29178444-29178481)
chr5 (87-135)||(689535-689583)
chr5 (93-157)||(1669584-1669647)
chr5 (93-133)||(8543570-8543610)
chr5 (97-133)||(10032301-10032337)
chr5 (92-160)||(10704332-10704399)
chr5 (91-135)||(11720886-11720930)
chr5 (96-160)||(13796327-13796390)
chr5 (93-133)||(28207126-28207166)
chr5 (104-172)||(31939376-31939444)
chr5 (88-160)||(32131603-32131674)
chr5 (110-154)||(36162896-36162939)
chr5 (96-144)||(40027781-40027828)
[»] chr8 (34 HSPs)
chr8 (93-159)||(33373754-33373819)
chr8 (98-158)||(1135396-1135456)
chr8 (111-159)||(9192229-9192276)
chr8 (92-135)||(13357466-13357509)
chr8 (104-159)||(41603066-41603120)
chr8 (93-135)||(10732800-10732842)
chr8 (90-155)||(44293566-44293630)
chr8 (92-160)||(27134421-27134488)
chr8 (96-143)||(2958422-2958469)
chr8 (104-143)||(9663071-9663110)
chr8 (93-140)||(13577070-13577117)
chr8 (92-135)||(18148827-18148870)
chr8 (92-135)||(21557426-21557469)
chr8 (92-135)||(37999445-37999488)
chr8 (104-135)||(44037390-44037421)
chr8 (112-171)||(44159074-44159133)
chr8 (97-171)||(6038265-6038338)
chr8 (93-135)||(6447183-6447225)
chr8 (93-159)||(8137929-8137994)
chr8 (97-155)||(15188897-15188954)
chr8 (93-135)||(29376895-29376937)
chr8 (93-135)||(33445564-33445606)
chr8 (93-159)||(35843129-35843194)
chr8 (93-159)||(39821878-39821943)
chr8 (97-158)||(1644676-1644736)
chr8 (93-134)||(19163562-19163603)
chr8 (97-134)||(35103104-35103141)
chr8 (90-135)||(37117549-37117594)
chr8 (97-133)||(13004163-13004199)
chr8 (93-133)||(14975890-14975930)
chr8 (91-135)||(15225797-15225841)
chr8 (96-160)||(26885639-26885702)
chr8 (91-135)||(33105383-33105427)
chr8 (99-135)||(40795377-40795413)
[»] chr3 (46 HSPs)
chr3 (96-157)||(25874127-25874188)
chr3 (93-133)||(28244131-28244171)
chr3 (96-159)||(2186429-2186491)
chr3 (92-135)||(8942010-8942053)
chr3 (93-135)||(1757694-1757736)
chr3 (110-144)||(5030216-5030250)
chr3 (97-135)||(5941319-5941357)
chr3 (93-159)||(7464493-7464558)
chr3 (93-135)||(32303354-32303396)
chr3 (92-158)||(52543695-52543760)
chr3 (93-134)||(7557560-7557601)
chr3 (96-140)||(47313392-47313436)
chr3 (93-161)||(49975805-49975872)
chr3 (93-172)||(38130948-38131026)
chr3 (96-143)||(40862168-40862215)
chr3 (96-135)||(43490442-43490481)
chr3 (93-160)||(46903902-46903968)
chr3 (93-135)||(7868716-7868758)
chr3 (93-159)||(8127457-8127522)
chr3 (93-135)||(10498720-10498762)
chr3 (93-135)||(23332644-23332686)
chr3 (94-172)||(25340913-25340990)
chr3 (93-135)||(25527863-25527905)
chr3 (93-135)||(27432228-27432270)
chr3 (93-159)||(32632315-32632380)
chr3 (93-159)||(32843264-32843329)
chr3 (93-135)||(38559921-38559963)
chr3 (97-135)||(42943298-42943336)
chr3 (93-159)||(51047171-51047237)
chr3 (93-135)||(51882225-51882267)
chr3 (94-131)||(3149105-3149142)
chr3 (93-154)||(21506765-21506825)
chr3 (98-135)||(22486682-22486719)
chr3 (99-140)||(27532834-27532875)
chr3 (92-140)||(5293665-5293713)
chr3 (93-133)||(7738663-7738703)
chr3 (99-135)||(19468451-19468487)
chr3 (93-133)||(22722396-22722436)
chr3 (99-159)||(25441502-25441561)
chr3 (91-171)||(35863803-35863882)
chr3 (93-133)||(36170117-36170157)
chr3 (93-133)||(39481135-39481175)
chr3 (108-140)||(40493013-40493045)
chr3 (93-133)||(44579630-44579670)
chr3 (95-155)||(52575943-52576002)
chr3 (93-133)||(54018433-54018473)
[»] chr7 (46 HSPs)
chr7 (99-143)||(34722038-34722082)
chr7 (93-159)||(23198751-23198816)
chr7 (93-159)||(27993031-27993096)
chr7 (93-140)||(20243249-20243296)
chr7 (90-133)||(21993173-21993216)
chr7 (93-159)||(5041333-5041398)
chr7 (93-135)||(8883547-8883589)
chr7 (93-155)||(24839482-24839543)
chr7 (92-158)||(38025121-38025187)
chr7 (93-133)||(4227555-4227595)
chr7 (91-135)||(10244719-10244763)
chr7 (93-133)||(36341092-36341132)
chr7 (91-135)||(39801698-39801742)
chr7 (93-133)||(46207754-46207794)
chr7 (93-133)||(47589580-47589620)
chr7 (92-135)||(5526718-5526761)
chr7 (92-135)||(9522905-9522948)
chr7 (93-172)||(19416508-19416586)
chr7 (93-140)||(38728202-38728249)
chr7 (97-159)||(46220953-46221013)
chr7 (93-136)||(47943210-47943253)
chr7 (93-136)||(47948640-47948683)
chr7 (93-135)||(2916096-2916138)
chr7 (93-159)||(10025988-10026053)
chr7 (93-135)||(19626550-19626592)
chr7 (93-135)||(27263335-27263377)
chr7 (93-135)||(27270229-27270271)
chr7 (92-134)||(30006118-30006160)
chr7 (93-135)||(31292794-31292836)
chr7 (93-135)||(34448635-34448677)
chr7 (93-159)||(40187638-40187703)
chr7 (93-135)||(48980481-48980523)
chr7 (94-143)||(2450575-2450623)
chr7 (93-134)||(14786117-14786158)
chr7 (98-135)||(25251509-25251546)
chr7 (97-158)||(35666301-35666361)
chr7 (90-135)||(38553809-38553854)
chr7 (98-139)||(46418552-46418593)
chr7 (90-135)||(47342459-47342504)
chr7 (93-133)||(13955474-13955514)
chr7 (99-135)||(22991416-22991452)
chr7 (99-135)||(30467981-30468017)
chr7 (96-132)||(42598935-42598971)
chr7 (93-133)||(44454506-44454546)
chr7 (93-133)||(47342671-47342711)
chr7 (91-135)||(48065194-48065238)
[»] chr2 (39 HSPs)
chr2 (92-135)||(13196693-13196736)
chr2 (93-139)||(14414916-14414962)
chr2 (92-135)||(2256964-2257007)
chr2 (96-135)||(19189769-19189808)
chr2 (93-143)||(11817363-11817413)
chr2 (93-143)||(17736787-17736836)
chr2 (105-155)||(19595484-19595534)
chr2 (97-135)||(33966319-33966357)
chr2 (93-135)||(34977198-34977240)
chr2 (90-135)||(9383234-9383279)
chr2 (92-172)||(24592835-24592914)
chr2 (93-133)||(29798544-29798584)
chr2 (93-133)||(42475137-42475177)
chr2 (92-135)||(18789408-18789451)
chr2 (96-135)||(32458113-32458152)
chr2 (92-135)||(44526121-44526164)
chr2 (93-135)||(7201501-7201543)
chr2 (93-135)||(8761589-8761631)
chr2 (93-135)||(9517034-9517076)
chr2 (93-135)||(12193421-12193463)
chr2 (93-135)||(19549430-19549472)
chr2 (93-159)||(33117406-33117472)
chr2 (93-135)||(35727431-35727473)
chr2 (105-159)||(41859858-41859911)
chr2 (90-135)||(13922657-13922702)
chr2 (94-135)||(19967413-19967454)
chr2 (94-151)||(20517017-20517073)
chr2 (90-135)||(21497658-21497703)
chr2 (97-158)||(31835489-31835549)
chr2 (91-172)||(35820290-35820370)
chr2 (93-134)||(40295484-40295525)
chr2 (111-171)||(11175797-11175856)
chr2 (96-140)||(19976150-19976194)
chr2 (99-135)||(23250345-23250381)
chr2 (91-171)||(32957533-32957612)
chr2 (99-135)||(38443543-38443579)
chr2 (93-133)||(40365433-40365473)
chr2 (87-155)||(41187463-41187530)
chr2 (104-168)||(41668660-41668723)
[»] chr1 (53 HSPs)
chr1 (92-143)||(14907053-14907104)
chr1 (93-172)||(24752636-24752715)
chr1 (93-135)||(27853349-27853391)
chr1 (93-159)||(39452454-39452520)
chr1 (97-171)||(48646715-48646789)
chr1 (96-140)||(29451002-29451046)
chr1 (93-161)||(35308179-35308246)
chr1 (92-135)||(2884473-2884516)
chr1 (96-143)||(28053258-28053305)
chr1 (93-131)||(6423791-6423829)
chr1 (93-135)||(26086923-26086965)
chr1 (93-159)||(26803453-26803518)
chr1 (93-135)||(48681958-48682000)
chr1 (93-134)||(8266212-8266253)
chr1 (94-135)||(41182631-41182672)
chr1 (99-155)||(11410627-11410682)
chr1 (99-135)||(28832196-28832232)
chr1 (93-133)||(41032925-41032965)
chr1 (96-135)||(3573349-3573388)
chr1 (88-135)||(10480703-10480750)
chr1 (92-159)||(15668491-15668557)
chr1 (96-143)||(15892794-15892841)
chr1 (93-172)||(42045361-42045439)
chr1 (112-159)||(44119474-44119520)
chr1 (94-133)||(47444933-47444972)
chr1 (93-132)||(47692933-47692972)
chr1 (97-135)||(10356208-10356246)
chr1 (93-171)||(16033440-16033517)
chr1 (93-135)||(30678838-30678880)
chr1 (93-135)||(30795695-30795737)
chr1 (93-135)||(31338013-31338055)
chr1 (93-135)||(32950786-32950828)
chr1 (97-135)||(35442853-35442891)
chr1 (93-135)||(49843428-49843470)
chr1 (110-140)||(50727305-50727335)
chr1 (93-134)||(1091173-1091214)
chr1 (94-143)||(2613717-2613765)
chr1 (96-133)||(2636782-2636819)
chr1 (86-131)||(4770657-4770702)
chr1 (90-135)||(17139542-17139587)
chr1 (94-135)||(17339210-17339251)
chr1 (97-134)||(30085863-30085900)
chr1 (94-143)||(51046137-51046185)
chr1 (104-133)||(52262193-52262222)
chr1 (93-158)||(52267758-52267822)
chr1 (97-133)||(7550894-7550930)
chr1 (91-135)||(15602202-15602246)
chr1 (93-133)||(20481094-20481134)
chr1 (91-135)||(25532965-25533009)
chr1 (104-172)||(30382501-30382568)
chr1 (99-135)||(33229707-33229743)
chr1 (99-139)||(40021370-40021410)
chr1 (95-135)||(49875624-49875664)
[»] scaffold0009 (1 HSPs)
scaffold0009 (94-140)||(189611-189657)
[»] chr4 (44 HSPs)
chr4 (93-135)||(15170124-15170166)
chr4 (93-158)||(10399246-10399311)
chr4 (96-135)||(32923255-32923294)
chr4 (92-135)||(40070993-40071036)
chr4 (93-172)||(43034331-43034409)
chr4 (93-159)||(4916149-4916214)
chr4 (93-159)||(43722759-43722824)
chr4 (92-133)||(36059021-36059062)
chr4 (93-133)||(9913893-9913933)
chr4 (93-133)||(32430150-32430190)
chr4 (93-133)||(35287534-35287574)
chr4 (92-159)||(12322666-12322732)
chr4 (92-159)||(12588842-12588908)
chr4 (92-135)||(13984667-13984710)
chr4 (96-135)||(50380861-50380900)
chr4 (93-135)||(2186358-2186400)
chr4 (93-171)||(7230274-7230351)
chr4 (93-159)||(9946421-9946486)
chr4 (93-155)||(11198758-11198819)
chr4 (93-159)||(15849228-15849293)
chr4 (97-159)||(16431614-16431675)
chr4 (93-159)||(17729420-17729485)
chr4 (93-159)||(22164271-22164336)
chr4 (93-135)||(23225859-23225901)
chr4 (93-155)||(32180824-32180885)
chr4 (93-143)||(38340338-38340387)
chr4 (93-135)||(42344643-42344685)
chr4 (93-131)||(44724377-44724415)
chr4 (93-135)||(51436631-51436673)
chr4 (93-135)||(52270055-52270097)
chr4 (97-139)||(56361835-56361877)
chr4 (93-158)||(160703-160767)
chr4 (94-135)||(10069113-10069154)
chr4 (93-134)||(16451203-16451244)
chr4 (94-135)||(45970732-45970773)
chr4 (99-135)||(3936627-3936663)
chr4 (93-133)||(7030920-7030960)
chr4 (99-135)||(7282557-7282593)
chr4 (112-144)||(13964076-13964108)
chr4 (93-133)||(30780123-30780163)
chr4 (93-133)||(31604320-31604360)
chr4 (104-148)||(44689497-44689540)
chr4 (104-140)||(46853867-46853903)
chr4 (93-133)||(51002281-51002321)
[»] scaffold0012 (1 HSPs)
scaffold0012 (93-159)||(118813-118878)
[»] scaffold0743 (1 HSPs)
scaffold0743 (94-155)||(1424-1485)
[»] scaffold0062 (1 HSPs)
scaffold0062 (91-143)||(7466-7517)
[»] scaffold0328 (1 HSPs)
scaffold0328 (108-155)||(6988-7035)
[»] scaffold0122 (1 HSPs)
scaffold0122 (96-135)||(14211-14250)
[»] scaffold0098 (1 HSPs)
scaffold0098 (92-135)||(5418-5461)
[»] scaffold0015 (1 HSPs)
scaffold0015 (97-140)||(75181-75224)
[»] scaffold0008 (1 HSPs)
scaffold0008 (97-156)||(122889-122947)
[»] scaffold0458 (1 HSPs)
scaffold0458 (93-159)||(11153-11219)
[»] scaffold0350 (1 HSPs)
scaffold0350 (97-171)||(1246-1319)
[»] scaffold0011 (1 HSPs)
scaffold0011 (93-159)||(185257-185322)
[»] scaffold0050 (1 HSPs)
scaffold0050 (94-159)||(53382-53446)
[»] scaffold0021 (1 HSPs)
scaffold0021 (93-133)||(161135-161175)


Alignment Details
Target: chr6 (Bit Score: 470; Significance: 0; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 39 - 687
Target Start/End: Complemental strand, 14036400 - 14035769
Alignment:
Q  39 tttaaatggtgtaaaactgaaactcaaataagttgagataaaatttgatttatagtcctcgtgaccttaactcagttggtatgaacaatgcataataata 138  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  14036400 tttaaatggcgtaaaactgaaactcaaataagttgagataaaatttgatttatagtcctcgtaaccttagctcagttggtatgaacaatgcataataata 14036301  T
Q  139 tgtaaattctggggttcaaacttaggccaccaccnnnnnnnnnnttgatctaggccaccaaaaagaaaaattgatttatttggttaggaatcaaatatat 238  Q
    ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14036300 tgtaaattctggggttcaaacttaggccaccaccaaaagaaaaattgatctaggccaccaaaaagaaaaattgatttatttggtttggaatcaaatatat 14036201  T
Q  239 aaaattattcaacattaaatacattaaattgagtaatatcctatgtttttgtttcatttcacgttagttatattcaaaatagcggtgattataggatttt 338  Q
    ||||||||||||||||||||         |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14036200 aaaattattcaacattaaat---------tgagtaatatcctatgtttttgattcatttcacgttagttatattcaaaataccggtgattataggatttt 14036110  T
Q  339 tatcgtctttttctttttatattgttccatattactatttaacattcaattatatatccaactataatttgcattatgatgtagaatttccttttatgag 438  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14036109 tatcgtctttttcttttt-tattgttccatattactatttaacattcaattatatatccaactataatttgcattatgatgtagaatttccttttatgag 14036011  T
Q  439 tcgaaaaccttcaattttctcgtaagatttgcctttgcttgaaattcaattttctttactattcgctcccttaaggaacaacacacaacacataatgctg 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       ||||||||||||    
T  14036010 tcgaaaaccttcaattttctcgtaagatttgcctttgcttgaaattcaattttctttaccattcgctcccttaaggaacaa-------cacataatgctg 14035918  T
Q  539 ataagttggagaacacatatgtggatgaaaacaatctatgcattgtaatagaccaagacttttccaagtatgtannnnnnnnnnnnnaaaagactattaa 638  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||             |||||||||||||    
T  14035917 ataagttagagaacacatatgtggatgaaaacagtctatgcattgtaatagaccaagacttttccaagtctgtatttttgtttttttaaaagactattaa 14035818  T
Q  639 gtcataacgtggtttttactctttttattaatggtgtagatccattttt 687  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14035817 atcataacgtggtttttactctttttattaatggtgtagatccattttt 14035769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 547 - 687
Target Start/End: Complemental strand, 14031311 - 14031171
Alignment:
Q  547 gagaacacatatgtggatgaaaacaatctatgcattgtaatagaccaagacttttccaagtatgtannnnnnnnnnnnnaaaagactattaagtcataac 646  Q
    ||||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||| ||||             |||||||||||| ||||| ||    
T  14031311 gagaacacatatgtggatgaaaacagtctttgcacagtaatagaccaagacttttccaagtctgtatttttgtttttttaaaagactattatgtcatgac 14031212  T
Q  647 gtggtttttactctttttattaatggtgtagatccattttt 687  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  14031211 gtggtctttaccctttttattaatggtgtagatccattttt 14031171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 550 - 687
Target Start/End: Complemental strand, 14125919 - 14125782
Alignment:
Q  550 aacacatatgtggatgaaaacaatctatgcattgtaatagaccaagacttttccaagtatgtannnnnnnnnnnnnaaaagactattaagtcataacgtg 649  Q
    ||||||||||||||| |||||| ||| ||||| ||||||||||||||||||||||||| ||||             |||||||||||||||||| |||||    
T  14125919 aacacatatgtggatcaaaacagtctttgcatagtaatagaccaagacttttccaagtctgtatttttgtttttttaaaagactattaagtcatgacgtg 14125820  T
Q  650 gtttttactctttttattaatggtgtagatccattttt 687  Q
    || ||||| |||||||| ||| ||||||||||||||||    
T  14125819 gtctttaccctttttataaatcgtgtagatccattttt 14125782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 497
Target Start/End: Complemental strand, 14126127 - 14126038
Alignment:
Q  407 ttgcattatgatgtagaatttccttttatgagtcgaaaaccttcaattttctcgtaagatttgcctttgcttgaaattcaattttctttac 497  Q
    |||||| ||||||||||||||| |||||||| | ||||||||||  || |||| |||| ||||||||||||||||| ||||||||||||||    
T  14126127 ttgcataatgatgtagaatttctttttatgaattgaaaaccttct-ttctctcctaagttttgcctttgcttgaaaatcaattttctttac 14126038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 324 - 450
Target Start/End: Complemental strand, 14031556 - 14031435
Alignment:
Q  324 tgattataggatttttatcgtctttttctttttatattgttccatattactatttaacattcaattatatatccaactataatttgcattatgatgtaga 423  Q
    ||||||||||||||||||  |||||||| |||| ||||||| || ||||||||||| ||||||||||| |||  | |   ||||||||| ||||||||||    
T  14031556 tgattataggatttttatattctttttcctttt-tattgtttcacattactatttatcattcaattat-tatatatc---aatttgcataatgatgtaga 14031462  T
Q  424 atttccttttatgagtcgaaaaccttc 450  Q
    ||||| ||| |||| | ||||||||||    
T  14031461 atttcttttaatgaattgaaaaccttc 14031435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 28951394 - 28951435
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  28951394 tcctcgtgagcttaactcagttggtatgaacaatgcataata 28951435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 13496109 - 13496152
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  13496109 agtcctcgtgagcttaactcagttgatatgaacaatgcataata 13496152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 20480699 - 20480657
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  20480699 agtcctcgtgagcttaactcagttggtaggaacaatgcataat 20480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 34828300 - 34828350
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    ||||||||||  ||| ||||||||||||| |||||||||||||||||||||    
T  34828300 gtcctcgtgagtttagctcagttggtatggacaatgcataataatatgtaa 34828350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 16390423 - 16390499
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccacca 170  Q
    |||||||||| |||| ||||||||||| | |||||||||||| ||||||||  || ||||||||||| | ||||||||    
T  16390423 gtcctcgtgagcttacctcagttggtagggacaatgcataat-atatgtaaggtccggggttcaaacctcggccacca 16390499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 20744133 - 20744197
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||| |||| ||||||||||||| |||||||||||| ||||| ||  ||||||||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataat-atatgcaaggtctggggttcaaac 20744197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 24438348 - 24438284
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||| |||||||||||||||| ||| |||||||||| ||||||||| |  |||||||||||    
T  24438348 tcctcgtgaacttaactcagttggtaagaataatgcataat-atatgtaaagttcggggttcaaac 24438284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 2726485 - 2726442
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| | |||||||||||||||||| |||||||||||||    
T  2726485 agtcctcgtaaacttaactcagttggtatggacaatgcataata 2726442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 5271384 - 5271427
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    ||||||||||||| |||||||||||||||||| ||||| |||||    
T  5271384 atagtcctcgtgaacttaactcagttggtatggacaatacataa 5271427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 9677229 - 9677295
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaact 160  Q
    |||||||||| |||| |||||||||| || |||||||||||| ||||| ||| |||||| ||||||||    
T  9677229 gtcctcgtgagcttagctcagttggtttggacaatgcataat-atatgaaaaatctgggattcaaact 9677295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 135
Target Start/End: Complemental strand, 14773038 - 14773007
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||||||||||||||||||||||||    
T  14773038 cttaactcagttggtatgaacaatgcataata 14773007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 16890516 - 16890466
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    ||||||||||| ||||||| |||||||||| ||||||||||| |||||||||    
T  16890516 agtcctcgtgagcttaacttagttggtatggacaatgcataa-aatatgtaa 16890466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 19277567 - 19277610
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| ||||||||||||| || |||||||||||||||    
T  19277567 agtcctcgtgaacttaactcagttgataggaacaatgcataata 19277610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 33938743 - 33938704
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  33938743 ctcgtgagcttagctcagttggtatgaacaatgcataata 33938704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 2445293 - 2445335
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||| | ||||||||||||| ||||||||||||||||||    
T  2445293 gtcctcgtaagcttaactcagttgatatgaacaatgcataata 2445335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 3358385 - 3358427
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||||||||||| || |||||||||||||    
T  3358385 gtcctcgtgaacttaactcagttggtttggacaatgcataata 3358427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 8138525 - 8138460
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||  ||| |||||||| || |||||||||||||| ||||||||  ||||||||||||||    
T  8138525 gtcctcgtgaatttagctcagttgataagaacaatgcataat-atatgtaaggtctggggttcaaac 8138460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 9111041 - 9111083
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||  ||||||||||||||||||||||||||    
T  9111041 gtcctcgtgagcttagttcagttggtatgaacaatgcataata 9111083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 9311997 - 9311955
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||||||||| ||| |||||||    
T  9311997 gtcctcgtgagcttaactcagttggtatgaataatacataata 9311955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 17278964 - 17279002
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcat 131  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  17278964 gtcctcgtgagcttaactcagttggtatggacaatgcat 17279002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 29335642 - 29335600
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||| |||| ||||||||||||||    
T  29335642 gtcctcgtgagcttaactcagttagtataaacaatgcataata 29335600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 32053782 - 32053824
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  32053782 gtcctcgtgagcttagctcagttggtatggacaatgcataata 32053824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 34701141 - 34701218
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    |||||||||| ||||  |||||||||| |||||||||||||| ||||| ||  |||| ||||||||||  |||||||||    
T  34701141 gtcctcgtgaacttagttcagttggtaggaacaatgcataat-atatgcaaggtctgaggttcaaactccggccaccac 34701218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 1989108 - 1989068
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  1989108 tcctcgtgagcttaactcagttggtatg-acaatgcataata 1989068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 2108722 - 2108759
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  2108722 ctcgtgagcttaactcagttggtatggacaatgcataa 2108759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 2213292 - 2213333
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| ||||||||| |||||| |||||||||||||||    
T  2213292 tcctcgtgaacttaactcaattggtaagaacaatgcataata 2213333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 4379551 - 4379510
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| |||||||||||||||| ||||||| |||||||    
T  4379551 tcctcgtgagcttaactcagttggtaggaacaatacataata 4379510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 9558435 - 9558484
Alignment:
Q  86 atttatagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| |||||||||| |||| ||| ||||||||||||||| |||||||    
T  9558435 atttattgtcctcgtgagcttagctcggttggtatgaacaatacataata 9558484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 13376303 - 13376348
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||||| |||| |||| |||||||| |||||||||||||    
T  13376303 atagtcctcgtgagcttagctcaattggtatggacaatgcataata 13376348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 21857120 - 21857083
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatg 128  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  21857120 tagtccttgtgagcttaactcagttggtatgaacaatg 21857083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 24212595 - 24212539
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaactt 161  Q
    ||||||||||||| |||| |||||||||||| ||||||||  | ||||||||||||||    
T  24212595 cttaactcagttgatatggacaatgcataat-atatgtaatgtatggggttcaaactt 24212539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 361754 - 361790
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||||||||||||||| |||||||||||||    
T  361754 gtgagcttaactcagttggtatggacaatgcataata 361790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 136
Target Start/End: Original strand, 4273359 - 4273391
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataataa 136  Q
    |||||||||||||||| ||||||||||||||||    
T  4273359 cttaactcagttggtaagaacaatgcataataa 4273391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 4494938 - 4494898
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| ||||||||||||| |||||||||||    
T  4494938 gtcctcgtgagcttagctcagttggtatggacaatgcataa 4494898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 9244170 - 9244127
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||| ||||||||||||||||||||||||| |||| |||||||||    
T  9244170 gtgaacttaactcagttggtatgaacaatgaataa-aatatgtaa 9244127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 9444951 - 9444991
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| |||||||||||||||||||| ||||    
T  9444951 gtcctcgtgagcttagctcagttggtatgaacaatgtataa 9444991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 10320499 - 10320463
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatg 128  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  10320499 agtcctcgtgagcttaactcagttggtaagaacaatg 10320463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 18313927 - 18313967
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| ||||||||||||| || |||||||||||||    
T  18313927 gtcctcgtgagcttaactcagttgataggaacaatgcataa 18313967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 27834331 - 27834398
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||||| ||||||||||| |||| | |||| ||||||| ||||| ||  ||||||||||||||    
T  27834331 tagtcctcgtgagcttaactcagtgggtagggacaaggcataat-atatgcaaggtctggggttcaaac 27834398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 40782615 - 40782536
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    ||||||||||  ||||||||||| ||||| ||||||||||||||||||||| || ||||||||||||   ||||||||||    
T  40782615 gtcctcgtgagtttaactcagtttgtatggacaatgcataataatatgtaacttatggggttcaaaccccggccaccacc 40782536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 18589936 - 18589892
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  18589936 tagtcctcgtgagcttaactcagttggtatgaacaatgcataata 18589892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 31561411 - 31561364
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31561411 gtcctcgtgagcttaactcagttggtatggacaatgcataataatatg 31561364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 27721742 - 27721679
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaa 157  Q
    |||||||||| |||| ||||||||||| |||||||||||||| ||||| ||| ||||||||||||    
T  27721742 gtcctcgtgagcttagctcagttggtaggaacaatgcataat-atatgcaaagtctggggttcaa 27721679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 26034672 - 26034633
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  26034672 ctcgtgagcttaactcagttggtatgaacaatgcataata 26034633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 32283576 - 32283623
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    ||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  32283576 ctcgtgagcttagctcagttggtatggacaatgcataataatatgtaa 32283623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 29695009 - 29695051
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  29695009 gtcctcgtgaccttaactcagttgatatggacaatgcataata 29695051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 14880406 - 14880443
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgca 130  Q
    |||||||||| |||||||||||||||||||||||||||    
T  14880406 gtcctcgtgagcttaactcagttggtatgaacaatgca 14880443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 16579436 - 16579399
Alignment:
Q  98 cgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  16579436 cgtgaacttaactcagttggtatgaacaatgcataata 16579399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 33369480 - 33369439
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  33369480 gtcctcgtgagcttaactcagttggtatgaacaatacataat 33369439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 5107310 - 5107270
Alignment:
Q  95 cctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  5107310 cctcgtgagcttaactcagttggtatgaataatgcataata 5107270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 11637639 - 11637599
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  11637639 gtcctcgtgagcttaactcagttggtatggacaatgcataa 11637599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 31602886 - 31602850
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31602886 gtgaccttagctcagttggtatgaacaatgcataata 31602850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 2322322 - 2322287
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatg 128  Q
    |||||||||| |||||||||||||||||||||||||    
T  2322322 gtcctcgtgaacttaactcagttggtatgaacaatg 2322287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 6489001 - 6489079
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    |||||||||| |||| ||||||||||| | |||||||||||| ||||| ||  ||||||||||||||   ||||||||||    
T  6489001 gtcctcgtgagcttagctcagttggtagggacaatgcataat-atatgcaaggtctggggttcaaaccccggccaccacc 6489079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 13864341 - 13864380
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  13864341 ctcgtgagcttaactcagttggtatgaacaatacataata 13864380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 17046331 - 17046370
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  17046331 ctcgtgagcttaactcagttggtatggacaatgcataata 17046370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 18431072 - 18430990
Alignment:
Q  88 ttatagtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    |||||||||| |||| ||||||||||||  |||| |||||| ||||| ||||||||| ||   ||||||||||| |||||||||    
T  18431072 ttatagtccttgtgagcttaactcagttaatatggacaatgtataat-atatgtaaaatccaaggttcaaacttcggccaccac 18430990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 22555225 - 22555264
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcata 132  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  22555225 gtcctcgtgagcttaactcagttggtatggacaatgcata 22555264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 22619869 - 22619908
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  22619869 tcctcgtgagcttagctcagttggtatgaacaatgcataa 22619908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 3389160 - 3389221
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||| | |||||||||||||||| |||||||||||| ||||| ||  ||||||||||||||    
T  3389160 tcgtgaacataactcagttggtatggacaatgcataat-atatgcaagatctggggttcaaac 3389221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 5150134 - 5150088
Alignment:
Q  109 ctcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    ||||||| ||||| |||||||||||||||||||||  ||||||||||    
T  5150134 ctcagttagtatggacaatgcataataatatgtaaggtctggggttc 5150088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 10199013 - 10199055
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  10199013 gtcctcgtgagcttagctcagttggtatggacaatgcataata 10199055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 10359664 - 10359626
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcat 131  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  10359664 gtcctcgtgaacttagctcagttggtatgaacaatgcat 10359626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 12909233 - 12909191
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||  ||| |||||||||||||||||||||||||||    
T  12909233 gtcctcgtgaatttagctcagttggtatgaacaatgcataata 12909191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 18995638 - 18995680
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||| ||||| |||||||||||||    
T  18995638 gtcctcgtgaacttaactcagtttgtatggacaatgcataata 18995680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 22585646 - 22585688
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||  ||||||||||||| ||||||||||||||||||    
T  22585646 gtcctcgtgggcttaactcagttgatatgaacaatgcataata 22585688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 24498578 - 24498627
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||||||||| ||||||||||||| |||||| ||||||||| |||||||||    
T  24498578 gtcctcgtgagcttaactcagttgatatgaataatgcataa-aatatgtaa 24498627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 33645756 - 33645714
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||||||| |||||| ||||||    
T  33645756 gtcctcgtgagcttaactcagttggtatggacaatgtataata 33645714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 37932324 - 37932366
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  37932324 gtcctcgtgagcttagctcagttggtatggacaatgcataata 37932366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 41651002 - 41650964
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  41651002 tcgtgagcttaactcagttggtatggacaatgcataata 41650964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 8682464 - 8682419
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| ||||||||||||||||||| ||| | |||||||||||||    
T  8682464 atagtcgtcgtgaccttaactcagttagtagggacaatgcataata 8682419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 12165232 - 12165273
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||||||| |||| ||||| ||||||||||||||||||||    
T  12165232 gtcctcgtgagcttagctcaggtggtatgaacaatgcataat 12165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 29178444 - 29178481
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  29178444 ctcgtgagcttaactcagttggtatggacaatgcataa 29178481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 689535 - 689583
Alignment:
Q  87 tttatagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||| |||||||||| ||||||||||||| |||| |||||| ||||||    
T  689535 tttattgtcctcgtgaacttaactcagttgatatggacaatgtataata 689583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 1669647 - 1669584
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaa 157  Q
    |||| ||||| |||| ||||||||||| |||||||||||||| ||||| ||| ||| ||||||||    
T  1669647 gtccccgtgaacttagctcagttggtaagaacaatgcataat-atatgcaaagtctagggttcaa 1669584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 8543570 - 8543610
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| ||||||||||||||| || |||||||||||    
T  8543570 gtcctcgtgagcttaactcagttggtttggacaatgcataa 8543610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 10032337 - 10032301
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||| |||||||||||||||||| |||||||||||    
T  10032337 tcgtgagcttaactcagttggtatggacaatgcataa 10032301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 10704399 - 10704332
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaact 160  Q
    |||||| |||| |||| ||||||||||||| ||||||||||| |||||| ||  || ||||||||||||    
T  10704399 agtccttgtgagcttagctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcaaact 10704332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 11720886 - 11720930
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| |||| |||||||||||||||| | |||||||||||||    
T  11720886 tagtccttgtgagcttaactcagttggtagggacaatgcataata 11720930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 13796327 - 13796390
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaact 160  Q
    ||||||| ||||||||||| | ||||||||||||||||| ||||| ||  |||||||| ||||||    
T  13796327 ctcgtgagcttaactcagtcgatatgaacaatgcataat-atatgcaaggtctggggtacaaact 13796390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 28207126 - 28207166
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| ||||||||||||| |||||||||||    
T  28207126 gtcctcgtgagcttagctcagttggtatggacaatgcataa 28207166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 31939376 - 31939444
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    |||||||||||||||||| | ||||||||| |||||  ||  | |||||||||||| | ||||||||||    
T  31939376 cttaactcagttggtatggataatgcataaaaatatacaagatttggggttcaaacatcggccaccacc 31939444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 32131674 - 32131603
Alignment:
Q  88 ttatagtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaact 160  Q
    |||| |||||| |||  |||||| ||||||||||||||||||||||| ||||  ||| |||| ||||||||||    
T  32131674 ttattgtcctcatgagtttaactaagttggtatgaacaatgcataat-atataaaaagtctgtggttcaaact 32131603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 36162939 - 36162896
Alignment:
Q  110 tcagttggtatgaacaatgcataataatatgtaaattctggggtt 154  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||    
T  36162939 tcagttggtatgaacaatgcataat-atatgtaaggtctggggtt 36162896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 40027828 - 40027781
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaa 144  Q
    ||||||| |||||||||||||| ||| |||||||||||| |||||||||    
T  40027828 ctcgtgagcttaactcagttggcatggacaatgcataat-atatgtaaa 40027781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 33373819 - 33373754
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||||||  ||||||||||||||    
T  33373819 gtcctcgtgaccttaactcagttggtatggacaattcataat-atatgtaaggtctggggttcaaac 33373754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 1135456 - 1135396
Alignment:
Q  98 cgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaa 158  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  1135456 cgtgagcttaactcagtttgtatgaacaatgcataataatatgtaaggtttggggttcaaa 1135396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 9192276 - 9192229
Alignment:
Q  111 cagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  9192276 cagttggtatgaacaatgcataat-atatgtaaagtctggggttcaaac 9192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 13357509 - 13357466
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| |||||||||||||||||| |||||||||||||    
T  13357509 agtcctcgtgagcttaactcagttggtatggacaatgcataata 13357466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 41603066 - 41603120
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  41603066 cttaactcaattggtatgaacaatgcataat-atatgtaaggtctggggttcaaac 41603120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 10732842 - 10732800
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  10732842 gtcctcgtgagcttaactcaattggtatgaacaatgcataata 10732800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 44293566 - 44293630
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    ||||||||||||| |||| ||||||||||||  |||||||||||| ||||||||  ||||||||||    
T  44293566 atagtcctcgtgagcttagctcagttggtatagacaatgcataat-atatgtaagatctggggttc 44293630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 27134488 - 27134421
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaact 160  Q
    |||| ||||||  |||||||||||||||||||||||| ||||| ||||| ||| || ||||||||||||    
T  27134488 agtcatcgtgagtttaactcagttggtatgaacaatgtataat-atatgcaaagtccggggttcaaact 27134421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 2958422 - 2958469
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    ||||||| ||||  |||||||||||| |||||||||||||||||||||    
T  2958422 ctcgtgagcttagttcagttggtatggacaatgcataataatatgtaa 2958469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 9663110 - 9663071
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  9663110 cttagctcagttggtatggacaatgcataataatatgtaa 9663071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 13577070 - 13577117
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    |||||| ||| |||||||||||||||||| |||||||||||| |||||    
T  13577070 gtcctcctgagcttaactcagttggtatggacaatgcataatcatatg 13577117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 18148870 - 18148827
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||    
T  18148870 agtcctcgtgagcttaactcagttaatatgaacaatgcataata 18148827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 21557426 - 21557469
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||    
T  21557426 agtcctcgtgagcttaactcagttagtatggacaatgcataata 21557469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 37999488 - 37999445
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| |||||||||||||||||| | |||||||||||    
T  37999488 agtcctcgtgagcttaactcagttggtatggataatgcataata 37999445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 135
Target Start/End: Complemental strand, 44037421 - 44037390
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||||||||||||||||||||||||    
T  44037421 cttaactcagttggtatgaacaatgcataata 44037390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 44159074 - 44159133
Alignment:
Q  112 agttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    ||||||||||||||||||||||| || |||||  |||||||||| ||||  |||||||||    
T  44159074 agttggtatgaacaatgcataatgatttgtaaggtctggggttcgaactccggccaccac 44159133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 6038338 - 6038265
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    |||||| |||| |||||||| |||| |||||||||||| ||||||||  ||||| |||||||||  |||||||||    
T  6038338 tcgtgaacttagctcagttgatatggacaatgcataat-atatgtaaggtctggagttcaaactccggccaccac 6038265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 6447183 - 6447225
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||  ||||||||||||||||| |||||||||||||    
T  6447183 gtcctcgtgagtttaactcagttggtatggacaatgcataata 6447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 8137929 - 8137994
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||| | |||| ||||||||||||| ||||||||||| |||||| ||| | ||||||||||||    
T  8137929 gtcctcgtaagcttagctcagttggtatggacaatgcataa-aatatgcaaagtttggggttcaaac 8137994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 15188897 - 15188954
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    |||||| |||||||||||| ||||| |||||||||||| ||||||||  ||||||||||    
T  15188897 tcgtgagcttaactcagttagtatggacaatgcataat-atatgtaagatctggggttc 15188954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 29376895 - 29376937
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||||||| ||||||| |||||    
T  29376895 gtcctcgtgagcttaactcagttggtatggacaatgcgtaata 29376937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 33445564 - 33445606
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||| |||||||||||||||    
T  33445564 gtcctcgtgagcttagctcagttggtaggaacaatgcataata 33445606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 35843194 - 35843129
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||  |||||| ||||||||||| |||||||||| |||||||||  || |||||||||||    
T  35843194 gtcctcgtgagtttaacttagttggtatga-caatgcataaaaatatgtaaggtccggggttcaaac 35843129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 39821878 - 39821943
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| ||||||||||| | |||||||||||| ||||| ||  ||||||||||||||    
T  39821878 gtcctcgtgagcttagctcagttggtagggacaatgcataat-atatgcaaggtctggggttcaaac 39821943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 1644736 - 1644676
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaa 158  Q
    |||||| |||| |||||||||||||| |||||||||| |||||||||  |||||| ||||||    
T  1644736 tcgtgagcttagctcagttggtatgagcaatgcataa-aatatgtaaggtctgggattcaaa 1644676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 19163603 - 19163562
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||||||| |||| ||||||||||||| ||||||||||||    
T  19163603 gtcctcgtgagcttagctcagttggtatggacaatgcataat 19163562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 35103104 - 35103141
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  35103104 tcgtgagcttagctcagttggtatgaacaatgcataat 35103141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 37117594 - 37117549
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  37117594 atagtcctcgtgagcttagatcaattggtatgaacaatgcataata 37117549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 13004163 - 13004199
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||| |||||||||||||||||| |||||||||||    
T  13004163 tcgtgagcttaactcagttggtatggacaatgcataa 13004199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 14975930 - 14975890
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| ||||||||||||||||| |||||||    
T  14975930 gtcctcgtgagcttagctcagttggtatgaacagtgcataa 14975890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 15225797 - 15225841
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| |||| |||||||||||| ||||| |||||||||||||    
T  15225797 tagtccttgtgagcttaactcagttagtatggacaatgcataata 15225841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 26885702 - 26885639
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaact 160  Q
    |||||||  ||| ||||||||||||||||||||||||| |||||||||  || ||||||| ||||    
T  26885702 ctcgtgagtttagctcagttggtatgaacaatgcataa-aatatgtaagatccggggttcgaact 26885639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 33105383 - 33105427
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||| |||| ||||| |||| ||||||||||||||||    
T  33105383 tagtcctcgtgagcttagctcagctggtttgaacaatgcataata 33105427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 40795377 - 40795413
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||||||||||||||||||||| |||||||    
T  40795377 gtgagcttaactcagttggtatgaacaatacataata 40795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 25874127 - 25874188
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaa 157  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||  || |||||||||    
T  25874127 ctcgtgagcttaactcagttggtatggacaatgcataataatatgtaaggtccggggttcaa 25874188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 28244171 - 28244131
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  28244171 gtcctcgtgagcttaactcagttggtatgaacaatgcataa 28244131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 2186491 - 2186429
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||| |||||||||||||||||| ||||| |||||| ||||||||  ||||||||||||||    
T  2186491 ctcgtgaacttaactcagttggtatggacaatacataat-atatgtaaggtctggggttcaaac 2186429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 8942010 - 8942053
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  8942010 agtcttcgtgagcttaactcagttggtatgaacaatgcataata 8942053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 1757736 - 1757694
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  1757736 gtcctcgtgagcttaactcagttggtaggaacaatgcataata 1757694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 144
Target Start/End: Original strand, 5030216 - 5030250
Alignment:
Q  110 tcagttggtatgaacaatgcataataatatgtaaa 144  Q
    |||||||||||||||||||||||||||||||||||    
T  5030216 tcagttggtatgaacaatgcataataatatgtaaa 5030250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 5941357 - 5941319
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  5941357 tcgtgagcttaactcagttggtatgaacaatgcataata 5941319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 7464558 - 7464493
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||  || |||||||||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataat-atatgtaaggtccggggttcaaac 7464493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 32303354 - 32303396
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  32303354 gtcctcgtgaacgtaactcagttggtatgaacaatgcataata 32303396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 52543760 - 52543695
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaa 158  Q
    ||||||| ||| ||||||| |||||||| |||||||||||||| ||||||||| | |||||||||||    
T  52543760 agtcctcttgagcttaacttagttggtaggaacaatgcataat-atatgtaaagtgtggggttcaaa 52543695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 7557601 - 7557560
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||||||| |||||||||||||||||| ||||||||||||    
T  7557601 gtcctcgtgagcttaactcagttggtatggacaatgcataat 7557560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 47313436 - 47313392
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||    
T  47313436 ctcgtgagcttagctcagttggtatggacaatgcataataatatg 47313392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 49975872 - 49975805
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaactt 161  Q
    ||||||| || ||||||||||||| |||| |||||||||||| ||||| ||  ||||||||||||||||    
T  49975872 gtcctcgcgagcttaactcagttgttatggacaatgcataat-atatgcaaggtctggggttcaaactt 49975805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 38131026 - 38130948
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    ||||| |||| |||||||||||||||||| |||||||||||| ||||| ||  || |||||||||||   ||||||||||    
T  38131026 gtccttgtgagcttaactcagttggtatggacaatgcataat-atatgcaaggtccggggttcaaaccccggccaccacc 38130948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 40862168 - 40862215
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    ||||||| |||| |||||||| ||||||||||| ||||||||||||||    
T  40862168 ctcgtgaacttagctcagttgttatgaacaatgtataataatatgtaa 40862215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 43490481 - 43490442
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  43490481 ctcgtgagcttagctcagttggtatgaacaatgcataata 43490442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 46903902 - 46903968
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaact 160  Q
    ||||||||||  ||||||||||||||||| |||||||||||| ||||||||  ||  |||||||||||    
T  46903902 gtcctcgtgagattaactcagttggtatggacaatgcataat-atatgtaaggtccagggttcaaact 46903968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 7868716 - 7868758
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||| |||||||||||||||    
T  7868716 gtcctcgtgagcttagctcagttggtaagaacaatgcataata 7868758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 8127457 - 8127522
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||||||||||||||| | ||||||||||| |||||| ||  | ||||||||||||    
T  8127457 gtcctcgtgagcttaactcagttggtaaggacaatgcataa-aatatgcaaggtttggggttcaaac 8127522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 10498762 - 10498720
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  10498762 gtcctcgtgagcttagctcagttggtatggacaatgcataata 10498720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 23332644 - 23332686
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||    
T  23332644 gtcctcgtgaacttaacttagttgatatgaacaatgcataata 23332686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 25340990 - 25340913
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    ||||||||| |||| ||||||||||||| ||||||||||| |||||| ||  || |||||||||||   ||||||||||    
T  25340990 tcctcgtgagcttagctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcaaaccccggccaccacc 25340913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 25527905 - 25527863
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||| |||| |||||||||||||||||||||||| |||||||    
T  25527905 gtccttgtgagcttaactcagttggtatgaacaattcataata 25527863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 27432228 - 27432270
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||| |||||||||| |||||||||||||    
T  27432228 gtcctcgtgaacttaacttagttggtatgtacaatgcataata 27432270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 32632315 - 32632380
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||  |||||||||||| ||||||||||||| ||||||||| | ||| ||||||||    
T  32632315 gtcctcgtgagctttgctcagttggtataaacaatgcataat-atatgtaaaatttggagttcaaac 32632380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 32843329 - 32843264
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| |||||||||| || ||||||||||| |||||| ||  ||||||||||||||    
T  32843329 gtcctcgtgagcttagctcagttggtttggacaatgcataa-aatatgcaaggtctggggttcaaac 32843264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 38559963 - 38559921
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||| |||| | ||||||||||||||||||||||||||||||    
T  38559963 gtccttgtgagcgtaactcagttggtatgaacaatgcataata 38559921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 42943298 - 42943336
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  42943298 tcgtgaccttaattcagttggtaagaacaatgcataata 42943336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 51047237 - 51047171
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||| ||||| |||| || |||||||||| |||||| ||||||||||||||  || |||||||||||    
T  51047237 gtccccgtgagcttaccttagttggtatggacaatgtataataatatgtaaggtccggggttcaaac 51047171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 51882267 - 51882225
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| ||||| |||||||||||||||||| |||||||||||||    
T  51882267 gtccccgtgagcttaactcagttggtatggacaatgcataata 51882225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 3149142 - 3149105
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcat 131  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  3149142 tcctcgtgagcttaactcagtttgtatgaacaatgcat 3149105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 21506825 - 21506765
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggtt 154  Q
    |||||||||| |||| ||||||||||||| ||||||||||| |||||| ||  |||||||||    
T  21506825 gtcctcgtgagcttagctcagttggtatggacaatgcataa-aatatgcaaggtctggggtt 21506765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 22486682 - 22486719
Alignment:
Q  98 cgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  22486682 cgtgagcttaactcagttggtaagaacaatgcataata 22486719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 27532834 - 27532875
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    |||| |||||||||||||||||| ||||| ||||||||||||    
T  27532834 gtgaacttaactcagttggtatggacaatacataataatatg 27532875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 5293713 - 5293665
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    ||||||||| | ||||||| |||||||||  ||||||||||||||||||    
T  5293713 agtcctcgtaaacttaacttagttggtattgacaatgcataataatatg 5293665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 7738663 - 7738703
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||||||||||||||| | |||||||||||    
T  7738663 gtcctcgtgagcttaactcagttggtagggacaatgcataa 7738703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 19468451 - 19468487
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||||||||||||||| |||||||||||||    
T  19468451 gtgagcttaactcagttggtatggacaatgcataata 19468487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 22722396 - 22722436
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| ||||||| |||||||||||||||||    
T  22722396 gtcctcgtgagcttagctcagttagtatgaacaatgcataa 22722436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 25441561 - 25441502
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||| |||| ||||||||||||| |||||||||||| ||||| ||  ||||||||||||||    
T  25441561 gtgaacttagctcagttggtatggacaatgcataat-atatgcaaggtctggggttcaaac 25441502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 35863882 - 35863803
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    |||||||||| | |||| ||||||||||| | ||||| |||||| ||||| ||  |||||||||||||| | |||||||||    
T  35863882 tagtcctcgtaagcttagctcagttggtaaggacaatacataat-atatgcaaggtctggggttcaaacctcggccaccac 35863803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 36170157 - 36170117
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| ||||||||| ||| ||||||||||||||||    
T  36170157 gtcctcgtgagcttaactcaattgatatgaacaatgcataa 36170117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 39481135 - 39481175
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| ||||||||||||| |||||||||||    
T  39481135 gtcctcgtgagcttagctcagttggtatggacaatgcataa 39481175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 40493013 - 40493045
Alignment:
Q  108 actcagttggtatgaacaatgcataataatatg 140  Q
    |||||||||||||| ||||||||||||||||||    
T  40493013 actcagttggtatggacaatgcataataatatg 40493045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 44579630 - 44579670
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| ||||||||||||| |||||||||||    
T  44579630 gtcctcgtgagcttagctcagttggtatggacaatgcataa 44579670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 52575943 - 52576002
Alignment:
Q  95 cctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    |||||| | |||| ||||||||||||||||||||||||| |||||| ||  ||||||||||    
T  52575943 cctcgtaagcttagctcagttggtatgaacaatgcataa-aatatgcaaggtctggggttc 52576002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 54018473 - 54018433
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||| ||||||||| |||||||||| |||||||||||    
T  54018473 gtcctcgtaaccttaacttagttggtatggacaatgcataa 54018433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 34722082 - 34722038
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  34722082 gtgagcttaactcagttggtatgaacaatgcataataatatgtaa 34722038  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 23198816 - 23198751
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||| ||| || |||||||||||    
T  23198816 gtcctcgtgagtttaactcagttggtatgaacaatgcataa-aatatgcaaagtccggggttcaaac 23198751  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 27993096 - 27993031
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| ||  ||| ||||||||||    
T  27993096 gtcctcgtgagcttaactcagttggtatgaacaatgcataa-aatatgcaaggtctagggttcaaac 27993031  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 20243249 - 20243296
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  20243249 gtcctcgtgagcttagctcagttggtatggacaatgcataataatatg 20243296  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 21993173 - 21993216
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    ||||||||||||| |||||||||||||||||| |||||||||||    
T  21993173 atagtcctcgtgagcttaactcagttggtatggacaatgcataa 21993216  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 5041333 - 5041398
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| ||||||| |||||||||| |||||||||||| ||||| ||  ||||||||||||||    
T  5041333 gtcctcgtgagcttaactgagttggtatggacaatgcataat-atatgcaaggtctggggttcaaac 5041398  T

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Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 8883547 - 8883589
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||||||| |||||||||||||    
T  8883547 gtcctcgtgagcttaactcagttggtatggacaatgcataata 8883589  T

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Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 24839482 - 24839543
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    |||||||||| |||||||||||||||||  ||||||||||| |||||||||  ||||||||||    
T  24839482 gtcctcgtgagcttaactcagttggtatagacaatgcataa-aatatgtaaggtctggggttc 24839543  T

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Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 38025187 - 38025121
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaa 158  Q
    ||||||||||| |||||||||||||||||| | |||| |||| |||||||||  || ||||||||||    
T  38025187 agtcctcgtgagcttaactcagttggtatggataatgaataaaaatatgtaaggtccggggttcaaa 38025121  T

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Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 4227595 - 4227555
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  4227595 gtcctcgtgagcttaactcagttggtatggacaatgcataa 4227555  T

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Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 10244719 - 10244763
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||    
T  10244719 tagtcctcgtgagcttagctcagttggtatggacaatgcataata 10244763  T

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Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 36341132 - 36341092
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  36341132 gtcctcttgagcttaactcagttggtatgaacaatgcataa 36341092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 39801698 - 39801742
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||    
T  39801698 tagtcctcgtgagcttagctcagttggtatggacaatgcataata 39801742  T

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Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 46207754 - 46207794
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  46207754 gtcctcgtgagcttagctcagttggtatgaacaatgcataa 46207794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 47589620 - 47589580
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  47589620 gtcctcgtgagcttagctcagttggtatgaacaatgcataa 47589580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 5526718 - 5526761
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||    
T  5526718 agtcctcgtgagcttagctcagttggtatggacaatgcataata 5526761  T

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Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 9522905 - 9522948
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||    
T  9522905 agtccgcgtgaacttagctcagttggtatgaacaatgcataata 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 19416508 - 19416586
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    |||||||||| |||| ||||||||||||| ||||||||||| |||||| ||  || |||||||||||   ||||||||||    
T  19416508 gtcctcgtgagcttagctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcaaaccccggccaccacc 19416586  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 38728202 - 38728249
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    |||||||||| |||| ||||||||||||| ||||||||||| ||||||    
T  38728202 gtcctcgtgagcttagctcagttggtatggacaatgcataaaaatatg 38728249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 46221013 - 46220953
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||| |||||||||||||||||| ||||||||||  |||||||||  || |||||||||||    
T  46221013 tcgtgagcttaactcagttggtatggacaatgcata--aatatgtaaggtcgggggttcaaac 46220953  T

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Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 47943210 - 47943253
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataa 136  Q
    |||||||||| |||||||||||| | ||||||||||||||||||    
T  47943210 gtcctcgtgagcttaactcagtttgcatgaacaatgcataataa 47943253  T

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Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 47948640 - 47948683
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataa 136  Q
    |||||||||| |||||||||||| | ||||||||||||||||||    
T  47948640 gtcctcgtgagcttaactcagtttgcatgaacaatgcataataa 47948683  T

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Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 2916096 - 2916138
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||||||||||||||||||| | |||||||||||||    
T  2916096 gtccccgtgaccttaactcagttggtacggacaatgcataata 2916138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 10025988 - 10026053
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| ||||||||||||||| || ||||||||||| |||||| ||  | ||||||||||||    
T  10025988 gtcctcgtgagcttaactcagttggtttggacaatgcataa-aatatgcaaggtatggggttcaaac 10026053  T

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Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 19626592 - 19626550
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||||||||||| || |||||||||||||    
T  19626592 gtcctcgtgagcttaactcagttggtttggacaatgcataata 19626550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 27263335 - 27263377
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| ||||| |||||||||||||||||| |||||||||||||    
T  27263335 gtccccgtgaacttaactcagttggtatggacaatgcataata 27263377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 27270229 - 27270271
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| ||||| |||||||||||||||||| |||||||||||||    
T  27270229 gtccccgtgaacttaactcagttggtatggacaatgcataata 27270271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 30006160 - 30006118
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||    
T  30006160 agtcctcgtgaacttagctcagttggtatgaataatgcataat 30006118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 31292836 - 31292794
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||    
T  31292836 gtccccgtgagcttaagtcagttggtatgaacaatgcataata 31292794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 34448677 - 34448635
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||||||||||| || |||||||||||||    
T  34448677 gtcctcgtgagcttaactcagttggtttggacaatgcataata 34448635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 40187703 - 40187638
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||| ||| |||||||||||||||| | |||||||||||| ||||||||  |||| |||||||||    
T  40187703 gtcctcatgagcttaactcagttggtagggacaatgcataat-atatgtaaggtctgcggttcaaac 40187638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 48980481 - 48980523
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  48980481 gtcctcgtgagcttagctcagttggtatggacaatgcataata 48980523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 2450575 - 2450623
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||| |||| |||||||||||||||||||||||| ||||| |||||||||    
T  2450575 tccttgtgagcttaactcagttggtatgaacaatacataa-aatatgtaa 2450623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 14786117 - 14786158
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||||||| |||| ||||||||||||||||||||| ||||    
T  14786117 gtcctcgtgagcttagctcagttggtatgaacaatgcttaat 14786158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 25251509 - 25251546
Alignment:
Q  98 cgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  25251509 cgtgagcttaactcagttggtataaacaatgcataata 25251546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 35666301 - 35666361
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaa 158  Q
    |||||| |||||||| ||||||| | |||||||||||| ||||||||  |||||||||||||    
T  35666301 tcgtgagcttaactcggttggtaaggacaatgcataat-atatgtaatgtctggggttcaaa 35666361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 38553809 - 38553854
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| ||||| |||| ||||||||||| |||||||||||||||    
T  38553809 atagtccccgtgaacttagctcagttggtaagaacaatgcataata 38553854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 46418593 - 46418552
Alignment:
Q  98 cgtgaccttaactcagttggtatgaacaatgcataataatat 139  Q
    ||||| |||||||||||||||| |||||||| ||||||||||    
T  46418593 cgtgagcttaactcagttggtaagaacaatgtataataatat 46418552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 47342504 - 47342459
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| ||| ||||||||||||||| || |||||||||||||    
T  47342504 atagtcctcatgagcttaactcagttggtttggacaatgcataata 47342459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 13955474 - 13955514
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||| ||||| |||| |||||||||||||||||||||||||    
T  13955474 gtccgcgtgagcttagctcagttggtatgaacaatgcataa 13955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 22991452 - 22991416
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||||||||||||||| |||||||||||||    
T  22991452 gtgagcttaactcagttggtatggacaatgcataata 22991416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 30467981 - 30468017
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  30467981 gtgagcttaactcagttggtttgaacaatgcataata 30468017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 42598935 - 42598971
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcata 132  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  42598935 ctcgtgaacttaactcagttgatatgaacaatgcata 42598971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 44454506 - 44454546
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||||||||||||||| | |||||||||||    
T  44454506 gtcctcgtgagcttaactcagttggtagggacaatgcataa 44454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 47342671 - 47342711
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| ||||||||||||| |||||||||||    
T  47342671 gtcctcgtgaacttagctcagttggtatggacaatgcataa 47342711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 48065194 - 48065238
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||| ||||||||| |||||||| ||||| |||||||    
T  48065194 tagtcctcgtgagcttaactcaattggtatggacaattcataata 48065238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 13196693 - 13196736
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  13196693 agtcctcgtgaacttaactcagttggtatgaacaatgcataata 13196736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 14414962 - 14414916
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatat 139  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||    
T  14414962 gtcctcgtgagcttaactcagttggtatggacaatgcataataatat 14414916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 2256964 - 2257007
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| |||||||||||||||||| |||||||||||||    
T  2256964 agtcctcgtgagcttaactcagttggtatggacaatgcataata 2257007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 19189808 - 19189769
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  19189808 ctcgtgaacttaactcagttggtatgaacaatgcataata 19189769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 11817413 - 11817363
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||||| ||| |||||||||||||||||| |||||| ||||||||||||||    
T  11817413 gtcctcatgagcttaactcagttggtatggacaatgtataataatatgtaa 11817363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 17736787 - 17736836
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  17736787 gtcctcgtgagcttagctcagttggtatgaacaatgcataa-aatatgtaa 17736836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 19595534 - 19595484
Alignment:
Q  105 ttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    |||||||||||||||||||| ||||||||||||||| ||  ||||||||||    
T  19595534 ttaactcagttggtatgaaccatgcataataatatgcaaggtctggggttc 19595484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 33966319 - 33966357
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  33966319 tcgtgaacttaactcagttggtatgaacaatgcataata 33966357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 34977198 - 34977240
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||||||| |||||||||||||    
T  34977198 gtcctcgtgagcttaactcagttggtatggacaatgcataata 34977240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 9383279 - 9383234
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||    
T  9383279 atagtcctcgtgagcttagctcagttggtatggacaatgcataata 9383234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 24592914 - 24592835
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    ||||||||||| |||| ||||||||||| | |||||||||||| ||||| ||  ||||||||||||||   ||||||||||    
T  24592914 agtcctcgtgaacttagctcagttggtagggacaatgcataat-atatgcaaggtctggggttcaaaccccggccaccacc 24592835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 29798584 - 29798544
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  29798584 gtcctcgtgagcttaactcagttggtatggacaatgcataa 29798544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 42475177 - 42475137
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  42475177 gtcctcgtgagcttaactcagttggtataaacaatgcataa 42475137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 18789408 - 18789451
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| ||||||||||||||| || |||||||||||||    
T  18789408 agtcctcgtgagcttaactcagttggtttggacaatgcataata 18789451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 32458113 - 32458152
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  32458113 ctcgtgaacttaactcagttggtatgaacaatgcacaata 32458152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 44526121 - 44526164
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||    
T  44526121 agtcctcgtgagcttagctcagttggtatggacaatgcataata 44526164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 7201501 - 7201543
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| |||||||||| ||||||||||||||||    
T  7201501 gtcctcgtgagcttagctcagttggtttgaacaatgcataata 7201543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 8761631 - 8761589
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||||||| ||||| |||||||    
T  8761631 gtcctcgtgagcttaactcagttggtatggacaatacataata 8761589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 9517076 - 9517034
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||  ||| |||||||||||||||||||||||||||    
T  9517076 gtcctcgtgagattagctcagttggtatgaacaatgcataata 9517034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 12193421 - 12193463
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||||||||||||||||  |||| ||||||||||||    
T  12193421 gtcctcgtgaccttaactcagttgaaatgagcaatgcataata 12193463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 19549430 - 19549472
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  19549430 gtcctcatgagcttaactcagctggtatgaacaatgcataata 19549472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 33117472 - 33117406
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||| |||| |||| ||||||| ||||||| ||||||||||||||| |||  || |||||||||||    
T  33117472 gtccttgtgagcttagctcagttagtatgaataatgcataataatatataaggtccggggttcaaac 33117406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 35727431 - 35727473
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| ||||| |||||||||||||||| |||||||||||||||    
T  35727431 gtccccgtgagcttaactcagttggtaagaacaatgcataata 35727473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 41859858 - 41859911
Alignment:
Q  105 ttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||||||||| ||||||||||| |||||| ||  ||||||||||||||    
T  41859858 ttaactcagttggtatggacaatgcataa-aatatgcaaggtctggggttcaaac 41859911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 13922702 - 13922657
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| |||||| |||||||||||||||| | |||||||||||||    
T  13922702 atagtcatcgtgagcttaactcagttggtagggacaatgcataata 13922657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 19967413 - 19967454
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| |||| |||||||| ||||||||||||||||||    
T  19967413 tcctcgtgagcttagctcagttgatatgaacaatgcataata 19967454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 20517017 - 20517073
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggg 151  Q
    |||||||||  ||| ||||||||||| |||||||||||||| |||||||| |||||||    
T  20517017 tcctcgtgagtttagctcagttggtaagaacaatgcataat-atatgtaagttctggg 20517073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 21497658 - 21497703
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| |||||| |||||||| ||||||| |||||||||||||||    
T  21497658 atagtcatcgtgagcttaactcggttggtaagaacaatgcataata 21497703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 31835489 - 31835549
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaa 158  Q
    |||||| |||| ||||||||||| |||||||||||||  ||||| ||| |||||||||||||    
T  31835489 tcgtgaacttatctcagttggtaagaacaatgcataa-catatgcaaagtctggggttcaaa 31835549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 35820370 - 35820290
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    |||||||||||| |||| ||||||||||| | |||||||||||| | ||| ||  || ||||||||||| | ||||||||||    
T  35820370 tagtcctcgtgagcttagctcagttggtagggacaatgcataat-acatgcaaggtccggggttcaaacctcggccaccacc 35820290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 40295525 - 40295484
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||||||| ||||||||| ||| |||||||||||||||||    
T  40295525 gtcctcgtgaacttaactcaattgatatgaacaatgcataat 40295484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 11175797 - 11175856
Alignment:
Q  111 cagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    ||||||||||| |||||||||||| ||||| ||  |||||||||||||||  |||||||||    
T  11175797 cagttggtatggacaatgcataat-atatgcaagatctggggttcaaactccggccaccac 11175856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 19976150 - 19976194
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    |||||||  ||| ||||||||||||| ||||||||||||||||||    
T  19976150 ctcgtgagtttagctcagttggtatggacaatgcataataatatg 19976194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 23250381 - 23250345
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||||||||||||| |||||||||||||||    
T  23250381 gtgagcttaactcagttggtaagaacaatgcataata 23250345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 32957612 - 32957533
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    ||||| ||||||  ||| ||| |||||||||||||||||||||| ||||||||  | ||||||| |||| | |||||||||    
T  32957612 tagtcatcgtgagtttagctcggttggtatgaacaatgcataat-atatgtaaggtttggggtttaaacctcggccaccac 32957533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 38443579 - 38443543
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||||||||| |||||||||||||||||||    
T  38443579 gtgagcttaactcagttcgtatgaacaatgcataata 38443543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 40365473 - 40365433
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| ||||||||||||| |||||||||||    
T  40365473 gtcctcgtgagcttagctcagttggtatgtacaatgcataa 40365433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 41187530 - 41187463
Alignment:
Q  87 tttatagtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    |||| ||||||||||| |||| || |||||||||| ||||||||||| |||||| ||| || |||||||    
T  41187530 tttaaagtcctcgtgagcttagcttagttggtatggacaatgcataa-aatatgcaaagtccggggttc 41187463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 41668660 - 41668723
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccac 168  Q
    |||| |||||||||||||||||||||||||| ||||| ||| ||||| |||| ||| | ||||||    
T  41668660 cttagctcagttggtatgaacaatgcataat-atatgcaaagtctggcgttcgaacctcggccac 41668723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 14907104 - 14907053
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  14907104 agtcctcgtgagcttaactcaattggtatgaacaatgtataataatatgtaa 14907053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 24752715 - 24752636
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||| ||  |||||||||| |||   ||||||||||    
T  24752715 gtcctcgtgagcttagctcagttggtatggacaatgcataataatatgcaaggtctggggttcgaaccccggccaccacc 24752636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 27853349 - 27853391
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  27853349 gtcctcgtgagcttaactcagttggtatgaacaatgcataata 27853391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 39452454 - 39452520
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||| ||  |||||| |||||||    
T  39452454 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaaatatgcaaggtctgggattcaaac 39452520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 48646789 - 48646715
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    |||||| |||||||||||| ||||| |||||||||||||||||| ||  || ||||||||||||  |||||||||    
T  48646789 tcgtgagcttaactcagtttgtatggacaatgcataataatatgcaaggtccggggttcaaactccggccaccac 48646715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 29451046 - 29451002
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||    
T  29451046 ctcgtgagcttaactcagttggtatggacaatgcataataatatg 29451002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 35308179 - 35308246
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaactt 161  Q
    |||||||||| ||||  ||||||||||||||||||||||||| ||||  ||| ||||||||||||||||    
T  35308179 gtcctcgtgagcttagttcagttggtatgaacaatgcataat-atatacaaaatctggggttcaaactt 35308246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 2884516 - 2884473
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  2884516 agtcctcgtgaccttaactcagttgatatggacaatgcataata 2884473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 28053305 - 28053258
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  28053305 ctcgtgagcttaattcagttggtatggacaatgcataataatatgtaa 28053258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 6423829 - 6423791
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcat 131  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6423829 gtcctcgtgagcttaactcagttggtatgaacaatgcat 6423791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 26086923 - 26086965
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  26086923 gtcctcgtgagcttaactcagttggtatgatcaatgcataata 26086965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 26803518 - 26803453
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| ||||||||||||| |||||||||||| ||||| ||| || |||||||||||    
T  26803518 gtcctcgtgaacttagctcagttggtatggacaatgcataat-atatgcaaagtccggggttcaaac 26803453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 48682000 - 48681958
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| |||||||||||||||||||||||||||    
T  48682000 gtcctcgtgagcttagctcagttggtatgaacaatgcataata 48681958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 8266253 - 8266212
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||||||| |||||||||||||||||| ||||||||||||    
T  8266253 gtcctcgtgatcttaactcagttggtatggacaatgcataat 8266212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 41182672 - 41182631
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  41182672 tcctcgtgagcttaactcagttggtatgaataatgcataata 41182631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 11410627 - 11410682
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  11410627 gtgagcttaactcagttggtatgaacaatacataa-aatatgtaaggtctggggttc 11410682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 28832232 - 28832196
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| ||||||||||||||||||||||||||||||||    
T  28832232 gtgagcttaactcagttggtatgaacaatgcataata 28832196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 41032925 - 41032965
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  41032925 gtcctcgtgagcttaactcagttgatatgaacaatgcataa 41032965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 3573388 - 3573349
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  3573388 ctcgtgagcttaactcagttggtaggaacaatgcataata 3573349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 10480703 - 10480750
Alignment:
Q  88 ttatagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||||||| |||||||||| ||||| | |||||||||||||    
T  10480703 ttatagtcctcgtgagcttaactcagatggtaaggacaatgcataata 10480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 15668491 - 15668557
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||| |||||||||||||||  ||||||||||||| |||||| ||  || |||||||||||    
T  15668491 agtcctcgtgatcttaactcagttggttggaacaatgcataa-aatatgcaaggtccggggttcaaac 15668557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 15892794 - 15892841
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||||||    
T  15892794 ctcgtgagcttagttcagttggtatgaacaatgcataaaaatatgtaa 15892841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 42045439 - 42045361
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    |||||||||| |||| ||||||||||||| |||||||||||| ||||| ||  ||||| ||||||||   ||||||||||    
T  42045439 gtcctcgtgagcttagctcagttggtatggacaatgcataat-atatgcaaggtctggagttcaaaccccggccaccacc 42045361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 44119520 - 44119474
Alignment:
Q  112 agttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  44119520 agttggtatgaacaatacataata-tatgtaagttctggggttcaaac 44119474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 47444972 - 47444933
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  47444972 tcctcgtgaacttaacttagttggtatgaacaatgcataa 47444933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 47692972 - 47692933
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcata 132  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  47692972 gtcctcgtgagcttaactcagttggtatggacaatgcata 47692933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 10356246 - 10356208
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  10356246 tcgtgagcttaactcagttggtatggacaatgcataata 10356208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 16033517 - 16033440
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    |||||||||| ||| ||||||||| || | |||||||||||| ||||| ||  |||||||||||||||  |||||||||    
T  16033517 gtcctcgtgagcttgactcagttgatagggacaatgcataat-atatgcaaggtctggggttcaaactccggccaccac 16033440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 30678880 - 30678838
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||||| | |||||||||||||    
T  30678880 gtcctcgtgagcttaactcagttggtagggacaatgcataata 30678838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 30795695 - 30795737
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||| |||||||||||||||    
T  30795695 gtcctcgtgaacttagctcagttggtaagaacaatgcataata 30795737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 31338013 - 31338055
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||| ||||| |||||||||||    
T  31338013 gtcctcgtgagcttaactcagttggcatgaataatgcataata 31338055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 32950828 - 32950786
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||    
T  32950828 gtccacgtgagcttaactcagttggtataaacaatgcataata 32950786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 35442853 - 35442891
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||| || |||||||||||||||||||||||||||||    
T  35442853 tcgtgagctaaactcagttggtatgaacaatgcataata 35442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 49843428 - 49843470
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||    
T  49843428 gtcctcgtgagcttaactcaattggtttgaacaatgcataata 49843470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 140
Target Start/End: Original strand, 50727305 - 50727335
Alignment:
Q  110 tcagttggtatgaacaatgcataataatatg 140  Q
    |||||||||||||||||||||||||||||||    
T  50727305 tcagttggtatgaacaatgcataataatatg 50727335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 1091173 - 1091214
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||||||| |||||||||||||||||  ||||||||||||    
T  1091173 gtcctcgtgagcttaactcagttggtatagacaatgcataat 1091214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 2613717 - 2613765
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    ||||||||| |||| ||||||||||||| ||||||||||| |||||||||    
T  2613717 tcctcgtgagcttagctcagttggtatggacaatgcataa-aatatgtaa 2613765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 2636819 - 2636782
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  2636819 ctcgtgagcttaactcagttggtatggacaatgcataa 2636782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 4770702 - 4770657
Alignment:
Q  86 atttatagtcctcgtgaccttaactcagttggtatgaacaatgcat 131  Q
    |||||| ||||| |||| ||||||||||||| ||||||||||||||    
T  4770702 atttattgtccttgtgagcttaactcagttgatatgaacaatgcat 4770657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 17139587 - 17139542
Alignment:
Q  90 atagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||||| |||| ||||||||||| | |||||||||||||    
T  17139587 atagtcctcgtgagcttagctcagttggtagggacaatgcataata 17139542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 17339210 - 17339251
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| | |||||||||||||||||||||||| |||||||    
T  17339210 tcctcgtaagcttaactcagttggtatgaacaatacataata 17339251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 30085863 - 30085900
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  30085863 tcgtgagcttgactcagttggtatgaacaatgcataat 30085900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 51046137 - 51046185
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||||||||  ||||||||||||||||||||||| ||||| |||||||||    
T  51046137 tcctcgtgagtttaactcagttggtatgaacaatacataa-aatatgtaa 51046185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 133
Target Start/End: Complemental strand, 52262222 - 52262193
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataa 133  Q
    ||||||||||||||||||||||||||||||    
T  52262222 cttaactcagttggtatgaacaatgcataa 52262193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 52267758 - 52267822
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaa 158  Q
    |||||||||| |||||||||||||||| | ||||||||||| |||||| ||  |||||| ||||||    
T  52267758 gtcctcgtgagcttaactcagttggtaaggacaatgcataa-aatatgcaaggtctgggattcaaa 52267822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 7550894 - 7550930
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  7550894 tcgtgagcttaactcagttgatatgaacaatgcataa 7550930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 15602246 - 15602202
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||| | || ||||||||||||| |||||||||||||    
T  15602246 tagtcctcgtgagcatagctcagttggtatggacaatgcataata 15602202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 20481094 - 20481134
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| |||||||||| ||||||||||||||    
T  20481094 gtcctcgtgagcttagctcagttggtttgaacaatgcataa 20481134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 25532965 - 25533009
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||| ||||  |||||||||||| |||||||||||||    
T  25532965 tagtcctcgtgagcttagttcagttggtatggacaatgcataata 25533009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 30382501 - 30382568
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    ||||||||||||||| || ||||||||||| |||||| ||  ||||| |||||||| | ||||||||||    
T  30382501 cttaactcagttggtttggacaatgcataa-aatatgcaaggtctggcgttcaaacctcggccaccacc 30382568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 33229743 - 33229707
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||||||||||||| |||||||||||||||    
T  33229743 gtgagcttaactcagttggtaggaacaatgcataata 33229707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 40021370 - 40021410
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataataatat 139  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  40021370 gtgaacttagctcagttggtatggacaatgcataataatat 40021410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 49875664 - 49875624
Alignment:
Q  95 cctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||| |||||||||||||||| | |||||||||||||    
T  49875664 cctcgtgagcttaactcagttggtaaggacaatgcataata 49875624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 189657 - 189611
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||    
T  189657 tcctcgtgaacttaactcagttggtatggacaatgcataataatatg 189611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 15170166 - 15170124
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  15170166 gtcctcgtgaacttaactcagttggtatgaacaatgcataata 15170124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 10399246 - 10399311
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaa 158  Q
    ||||||||||  |||| ||| |||||||||||||| |||||||||||||||| || ||||||||||    
T  10399246 gtcctcgtgagtttaattcaattggtatgaacaatacataataatatgtaaagtccggggttcaaa 10399311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 32923294 - 32923255
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  32923294 ctcgtgagcttaactcagttggtatgaacaatgcataata 32923255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 40071036 - 40070993
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  40071036 agtcatcgtgagcttaactcagttggtatgaacaatgcataata 40070993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 43034409 - 43034331
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccacc 172  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||||| ||  |||| |||||||||   ||||||||||    
T  43034409 gtcctcgtgagcttaactcagttggtatggacaatgcataat-atatgcaaggtctgaggttcaaaccccggccaccacc 43034331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 4916149 - 4916214
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| |||||||||| ||||||||||||||| ||||||||  | ||||||||||||    
T  4916149 gtcctcgtgaacttagctcagttggtttgaacaatgcataat-atatgtaagatttggggttcaaac 4916214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 43722759 - 43722824
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||  ||||||||||||||||| |||||||||||| ||||||||  || |||||||||||    
T  43722759 gtcctcgtgagtttaactcagttggtatggacaatgcataat-atatgtaaggtccggggttcaaac 43722824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 36059021 - 36059062
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  36059021 agtcctcgtgaacttagctcagttggtatgaacaatgcataa 36059062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 9913893 - 9913933
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  9913893 gtcctcgtgagcttagctcagttggtatgaacaatgcataa 9913933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 32430190 - 32430150
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  32430190 gtcctcgtgagcttaactcagttagtatgaacaatgcataa 32430150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 35287574 - 35287534
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  35287574 gtcctcgtgagcttagctcagttggtatgaacaatgcataa 35287534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 12322666 - 12322732
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||| |||| ||||||||||| | |||||||||||| ||||| || ||| |||||||||||    
T  12322666 agtcctcgtgagcttagctcagttggtacggacaatgcataat-atatgcaagttccggggttcaaac 12322732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 12588908 - 12588842
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||  |||||||||||||||||||||||| ||||| ||||| |||  |||| |||||||||    
T  12588908 agtcctcgtggtcttaactcagttggtatgaacaatacataa-aatatataagatctgaggttcaaac 12588842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 13984710 - 13984667
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||    
T  13984710 agtccccgtgagcttaactcagttggtaggaacaatgcataata 13984667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 50380900 - 50380861
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  50380900 ctcgtgagcttaattcagttggtatgaacaatgcataata 50380861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 2186400 - 2186358
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  2186400 gtcctcgtgagcttagctcagttggtatggacaatgcataata 2186358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 7230274 - 7230351
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    |||||||||| |||| ||||||||||| | |||||||||||| ||||| ||  || ||||||||||| | |||||||||    
T  7230274 gtcctcgtgagcttagctcagttggtaaggacaatgcataat-atatgcaaggtccggggttcaaacctcggccaccac 7230351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 9946421 - 9946486
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| ||||||||||||| ||||||||||| |||||| ||  || |||||||||||    
T  9946421 gtcctcgtgagcttagctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcaaac 9946486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 11198758 - 11198819
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    |||||||||| |||| ||||||||||||| | ||||||||| |||||||||  ||||||||||    
T  11198758 gtcctcgtgagcttagctcagttggtatggagaatgcataa-aatatgtaaggtctggggttc 11198819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 15849228 - 15849293
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| ||||||||||||| | ||||||||| |||||| ||| |||| |||||||||    
T  15849228 gtcctcgtgagcttagctcagttggtatggataatgcataa-aatatgcaaagtctgaggttcaaac 15849293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 16431614 - 16431675
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||| |||| ||||||||||||| ||||||||||| |||||| ||  ||||||||||||||    
T  16431614 tcgtgaacttagctcagttggtatggacaatgcataa-aatatgcaaggtctggggttcaaac 16431675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 17729420 - 17729485
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| ||||||||||||||||  |||||||| ||||| ||  ||||||||||||||    
T  17729420 gtcctcgtgaacttagctcagttggtatgaaccttgcataat-atatgcaaggtctggggttcaaac 17729485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 22164336 - 22164271
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||||  ||| || |||||||| |||||||||||||| ||||||||  ||||||||||||||    
T  22164336 gtcctcgtgagtttagcttagttggtaggaacaatgcataat-atatgtaaggtctggggttcaaac 22164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 23225859 - 23225901
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||||||||||||||| ||||||| |||||||    
T  23225859 gtcctcgtgaacttaactcagttggtaggaacaattcataata 23225901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 32180824 - 32180885
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    |||||||||| |||| ||||||||||||  ||||||||||| |||||| ||| ||||||||||    
T  32180824 gtcctcgtgagcttagctcagttggtatagacaatgcataa-aatatgcaaagtctggggttc 32180885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 38340387 - 38340338
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||||||||| |||||||||||||||||| ||||| ||||| |||||||||    
T  38340387 gtcctcgtgagcttaactcagttggtatggacaatacataa-aatatgtaa 38340338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 42344685 - 42344643
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||||||||||||| |||||| |||||||| ||||||    
T  42344685 gtcctcgtgaccttaactcaattggtaggaacaatgtataata 42344643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 44724377 - 44724415
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcat 131  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  44724377 gtccttgtgagcttaactcagttggtatgaacaatgcat 44724415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 51436673 - 51436631
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| ||||||||||||| || |||||||||||||||    
T  51436673 gtcctcgtgaacttaactcagttgatacgaacaatgcataata 51436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 52270097 - 52270055
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  52270097 gtcctcgtgagcttagctcagttggtatggacaatgcataata 52270055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 56361877 - 56361835
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatat 139  Q
    |||||| ||||||||||||| |||||||||||||| |||||||    
T  56361877 tcgtgagcttaactcagttgatatgaacaatgcatgataatat 56361835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 160703 - 160767
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaa 158  Q
    |||||||||| ||||  ||||| ||||| ||||||||||||| ||||||||  |||||||||||||    
T  160703 gtcctcgtgagcttagttcagtaggtattaacaatgcataat-atatgtaaggtctggggttcaaa 160767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 10069154 - 10069113
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| |||| |||||||||||||||||||| ||||||    
T  10069154 tcctcgtgaacttagctcagttggtatgaacaatgtataata 10069113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 16451203 - 16451244
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataat 134  Q
    |||||||||| ||||||||||||||||  |||||||||||||    
T  16451203 gtcctcgtgaacttaactcagttggtacaaacaatgcataat 16451244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 45970773 - 45970732
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||| ||||||||||||||||  ||||||||||||||    
T  45970773 tcctcgtgagcttaactcagttggtagaaacaatgcataata 45970732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 3936627 - 3936663
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||| |||||||||||||||||||||||||||    
T  3936627 gtgagcttagctcagttggtatgaacaatgcataata 3936663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 7030960 - 7030920
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||||||||||||||||  |||||||||||    
T  7030960 gtcctcgtgagcttaactcagttggtatagacaatgcataa 7030920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 7282557 - 7282593
Alignment:
Q  99 gtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||| |||| |||||||||||||||||||||||||||    
T  7282557 gtgaacttagctcagttggtatgaacaatgcataata 7282593  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 13964108 - 13964076
Alignment:
Q  112 agttggtatgaacaatgcataataatatgtaaa 144  Q
    |||||||||| ||||||||||||||||||||||    
T  13964108 agttggtatggacaatgcataataatatgtaaa 13964076  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 30780123 - 30780163
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||| ||||| |||||||||||||||||| |||||||||||    
T  30780123 gtccacgtgagcttaactcagttggtatggacaatgcataa 30780163  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 31604360 - 31604320
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||| ||||| |||||||||||||||| |||||||||||||    
T  31604360 gtccccgtgagcttaactcagttggtaagaacaatgcataa 31604320  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 44689497 - 44689540
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataataatatgtaaattct 148  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||    
T  44689497 cttaactcagttggtaagaacaatgcataat-atatgcaaattct 44689540  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 46853867 - 46853903
Alignment:
Q  104 cttaactcagttggtatgaacaatgcataataatatg 140  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  46853867 cttaactcagttggtatggacaatacataataatatg 46853903  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 51002281 - 51002321
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    |||||||||| |||||||||||||||||  |||||||||||    
T  51002281 gtcctcgtgagcttaactcagttggtatagacaatgcataa 51002321  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 118813 - 118878
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| |||||||||| |||||||||||||| |||||||||  ||||| ||||||||    
T  118813 gtcctcgtgagcttagctcagttggtttgaacaatgcataa-aatatgtaaggtctggagttcaaac 118878  T

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Target: scaffold0743 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 1485 - 1424
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||||| ||  ||||||||||    
T  1485 tcctcgtgagcttagcacagttggtatggacaatgcataataatatgcaacgtctggggttc 1424  T

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Target: scaffold0062 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 7466 - 7517
Alignment:
Q  91 tagtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaa 143  Q
    |||| ||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  7466 tagttctcgtgagcttaactcaattggtatgaacaatgcataa-aatatgtaa 7517  T

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Target: scaffold0328 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 6988 - 7035
Alignment:
Q  108 actcagttggtatgaacaatgcataataatatgtaaattctggggttc 155  Q
    |||| ||||||||| |||||||||||||||||||||  ||||||||||    
T  6988 actcggttggtatggacaatgcataataatatgtaaggtctggggttc 7035  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 14250 - 14211
Alignment:
Q  96 ctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  14250 ctcgtgagtttaactcagttggtatgaacaatgcataata 14211  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 5418 - 5461
Alignment:
Q  92 agtcctcgtgaccttaactcagttggtatgaacaatgcataata 135  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||    
T  5418 agtcctcgtgagcttagctcagttggtaagaacaatgcataata 5461  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 75181 - 75224
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatg 140  Q
    |||||| |||||||||||||||||| | ||||||||||||||||    
T  75181 tcgtgagcttaactcagttggtatggataatgcataataatatg 75224  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 122889 - 122947
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttca 156  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||| ||  |||||||||||    
T  122889 tcgtgagcttaactcaattggtatgaacaatgcataat-atatgcaaggtctggggttca 122947  T

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Target: scaffold0458 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 11219 - 11153
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| ||||  |||||||||||| ||||||||||| |||||| ||  |||||| |||||||    
T  11219 gtcctcgtgagcttagatcagttggtatggacaatgcataaaaatatgcaaggtctgggattcaaac 11153  T

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Target: scaffold0350 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 1246 - 1319
Alignment:
Q  97 tcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaacttaggccaccac 171  Q
    |||||| |||| |||||||| |||| |||||||||||| ||||||||  ||||| |||||||||  |||||||||    
T  1246 tcgtgaacttagctcagttgatatggacaatgcataat-atatgtaaggtctggagttcaaactccggccaccac 1319  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 185257 - 185322
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    |||||||||| |||| ||||||||||||| ||||||||||| |||||| ||  || |||||||||||    
T  185257 gtcctcgtgagcttagctcagttggtatggacaatgcataa-aatatgcaagatccggggttcaaac 185322  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 53446 - 53382
Alignment:
Q  94 tcctcgtgaccttaactcagttggtatgaacaatgcataataatatgtaaattctggggttcaaac 159  Q
    ||||||||| |||||||||||||| | | ||||||||||| |||||| ||  ||||||||||||||    
T  53446 tcctcgtgagcttaactcagttggaagggacaatgcataa-aatatgcaaggtctggggttcaaac 53382  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 161135 - 161175
Alignment:
Q  93 gtcctcgtgaccttaactcagttggtatgaacaatgcataa 133  Q
    ||||| |||| |||||||||||||||||| |||||||||||    
T  161135 gtccttgtgagcttaactcagttggtatggacaatgcataa 161175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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