View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11134_low_22 (Length: 239)
Name: NF11134_low_22
Description: NF11134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11134_low_22 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 39475641 - 39475864
Alignment:
| Q |
16 |
caataagagattctgctaccacaataatatagcatgccaaaaaacgtgtagagtagcatggttgacacttgcttcatcctacacgtggatttggtcagtg |
115 |
Q |
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| T |
39475641 |
caataagagattctgctaccacaataatatagcatgccaaaaaacgtgtagagtagcatggttgacacttgcttcatcctacacgtggatttggtcattg |
39475740 |
T |
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| Q |
116 |
ctatacacatgccatgttctacatgataagcatctttttctcttagttggcaagttaacaagtcatgttttaggcggttatgaatatggttaggttgaaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39475741 |
ctatacacatgccatgttctacatgataagcatctttttctcttagttggcaagttaacaagtcatgttttaggcggttatgaatatggttaggttgaaa |
39475840 |
T |
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| Q |
216 |
atgtggatttggtttggattgaat |
239 |
Q |
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|||||||||||||||||||||||| |
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| T |
39475841 |
atgtggatttggtttggattgaat |
39475864 |
T |
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