View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11134_low_23 (Length: 233)

Name: NF11134_low_23
Description: NF11134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11134_low_23
NF11134_low_23
[»] chr4 (29 HSPs)
chr4 (1-101)||(10733722-10733822)
chr4 (1-101)||(10947491-10947591)
chr4 (1-101)||(10739709-10739809)
chr4 (1-101)||(10953478-10953578)
chr4 (1-101)||(48160646-48160746)
chr4 (1-101)||(48166865-48166965)
chr4 (1-101)||(26957176-26957276)
chr4 (1-101)||(6257577-6257677)
chr4 (1-101)||(26971927-26972027)
chr4 (1-101)||(44831987-44832087)
chr4 (1-97)||(50168286-50168382)
chr4 (1-92)||(50155657-50155745)
chr4 (1-101)||(17627147-17627247)
chr4 (100-156)||(26957330-26957386)
chr4 (100-156)||(48160536-48160592)
chr4 (100-156)||(48166755-48166811)
chr4 (100-156)||(26972081-26972137)
chr4 (99-156)||(6257730-6257787)
chr4 (99-156)||(10733875-10733932)
chr4 (99-156)||(10739862-10739919)
chr4 (99-156)||(10947644-10947701)
chr4 (99-156)||(10953631-10953688)
chr4 (100-156)||(33458716-33458772)
chr4 (100-156)||(33461841-33461897)
chr4 (1-59)||(24287714-24287774)
chr4 (99-156)||(532110-532168)
chr4 (99-156)||(24287563-24287621)
chr4 (2-101)||(35177481-35177582)
chr4 (99-156)||(50168171-50168229)
[»] chr7 (33 HSPs)
chr7 (1-101)||(3811541-3811641)
chr7 (1-101)||(3817683-3817783)
chr7 (3-101)||(339068-339166)
chr7 (3-101)||(351474-351572)
chr7 (1-101)||(5849217-5849317)
chr7 (1-101)||(35148381-35148481)
chr7 (1-101)||(35152901-35153001)
chr7 (1-101)||(22742302-22742402)
chr7 (2-101)||(26383356-26383455)
chr7 (1-87)||(42767574-42767661)
chr7 (100-156)||(351364-351420)
chr7 (1-101)||(28421331-28421431)
chr7 (100-156)||(35153055-35153111)
chr7 (100-156)||(3817837-3817893)
chr7 (100-156)||(3811695-3811753)
chr7 (2-68)||(7608146-7608213)
chr7 (27-101)||(18666881-18666958)
chr7 (100-156)||(35148535-35148592)
chr7 (104-156)||(338958-339010)
chr7 (99-156)||(5979702-5979760)
chr7 (99-156)||(18667730-18667788)
chr7 (2-100)||(18657024-18657120)
chr7 (99-151)||(28421484-28421537)
chr7 (1-54)||(43539711-43539764)
chr7 (100-156)||(5849108-5849163)
chr7 (100-152)||(22742456-22742508)
chr7 (58-101)||(26380795-26380838)
chr7 (100-156)||(43539569-43539628)
chr7 (1-101)||(5979548-5979648)
chr7 (99-156)||(26383244-26383303)
chr7 (56-95)||(24689729-24689768)
chr7 (104-152)||(38023688-38023737)
chr7 (117-152)||(7608022-7608058)
[»] chr6 (29 HSPs)
chr6 (1-101)||(8651176-8651276)
chr6 (2-101)||(31756592-31756691)
chr6 (1-101)||(21197413-21197514)
chr6 (1-101)||(21783698-21783798)
chr6 (11-101)||(21770947-21771037)
chr6 (1-79)||(21789921-21789999)
chr6 (1-101)||(21191242-21191343)
chr6 (11-97)||(30905963-30906049)
chr6 (100-156)||(21771091-21771147)
chr6 (100-156)||(8651330-8651386)
chr6 (100-158)||(6096885-6096943)
chr6 (31-101)||(6096997-6097068)
chr6 (99-156)||(17581180-17581238)
chr6 (2-101)||(4580695-4580794)
chr6 (1-101)||(25353900-25353998)
chr6 (99-156)||(25343203-25343261)
chr6 (99-156)||(30906106-30906164)
chr6 (36-101)||(17581291-17581356)
chr6 (1-101)||(25343314-25343412)
chr6 (99-156)||(4580847-4580905)
chr6 (1-101)||(1106000-1106101)
chr6 (100-153)||(31756738-31756791)
chr6 (121-156)||(32030014-32030049)
chr6 (99-156)||(21191396-21191453)
chr6 (99-153)||(21783851-21783905)
chr6 (99-158)||(25353789-25353847)
chr6 (1-40)||(17581384-17581423)
chr6 (126-156)||(32044505-32044535)
chr6 (38-83)||(1283280-1283325)
[»] chr3 (51 HSPs)
chr3 (1-101)||(10761023-10761123)
chr3 (1-101)||(10769342-10769442)
chr3 (1-101)||(38449436-38449536)
chr3 (1-101)||(38455923-38456023)
chr3 (1-101)||(23138789-23138889)
chr3 (1-101)||(49151299-49151399)
chr3 (1-101)||(49157366-49157466)
chr3 (1-101)||(30051473-30051573)
chr3 (1-101)||(8331474-8331574)
chr3 (1-101)||(28964567-28964667)
chr3 (1-101)||(11846349-11846450)
chr3 (1-101)||(46656367-46656467)
chr3 (17-101)||(53071640-53071724)
chr3 (100-156)||(8331364-8331420)
chr3 (23-101)||(24643885-24643963)
chr3 (100-156)||(10761177-10761233)
chr3 (100-156)||(10769496-10769552)
chr3 (100-156)||(23138943-23138999)
chr3 (100-156)||(30051627-30051683)
chr3 (100-156)||(38456077-38456133)
chr3 (1-101)||(10238585-10238685)
chr3 (1-101)||(10244707-10244807)
chr3 (1-101)||(11840098-11840198)
chr3 (100-156)||(38449590-38449646)
chr3 (1-101)||(42191593-42191693)
chr3 (1-101)||(42197535-42197635)
chr3 (100-156)||(49151189-49151245)
chr3 (100-156)||(49157256-49157312)
chr3 (99-156)||(55003927-55003985)
chr3 (99-156)||(9586538-9586595)
chr3 (36-101)||(34300125-34300190)
chr3 (1-101)||(26429790-26429890)
chr3 (1-101)||(55003774-55003874)
chr3 (99-156)||(10238738-10238796)
chr3 (99-156)||(11840251-11840309)
chr3 (99-156)||(17056317-17056375)
chr3 (100-145)||(28964468-28964513)
chr3 (99-153)||(42191746-42191801)
chr3 (99-153)||(42197688-42197743)
chr3 (99-156)||(10244860-10244918)
chr3 (11-101)||(17056174-17056264)
chr3 (104-156)||(24644021-24644074)
chr3 (37-101)||(8474543-8474607)
chr3 (1-101)||(17601906-17602006)
chr3 (99-153)||(8474661-8474716)
chr3 (99-156)||(11846503-11846560)
chr3 (99-156)||(26429943-26430001)
chr3 (1-40)||(48128412-48128451)
chr3 (37-83)||(2982634-2982680)
chr3 (36-97)||(27103272-27103334)
chr3 (123-156)||(53071793-53071826)
[»] chr2 (35 HSPs)
chr2 (1-101)||(35439743-35439843)
chr2 (1-101)||(35442205-35442305)
chr2 (1-101)||(44717178-44717278)
chr2 (1-101)||(31002063-31002163)
chr2 (1-101)||(13150062-13150162)
chr2 (1-101)||(28683317-28683417)
chr2 (1-101)||(30965014-30965114)
chr2 (1-101)||(31008041-31008141)
chr2 (1-156)||(11048927-11049076)
chr2 (1-101)||(19879281-19879381)
chr2 (1-101)||(7771558-7771659)
chr2 (158-219)||(40552995-40553056)
chr2 (100-156)||(30964904-30964960)
chr2 (100-156)||(35439897-35439953)
chr2 (27-101)||(29832892-29832966)
chr2 (100-156)||(13150216-13150272)
chr2 (1-101)||(13455786-13455886)
chr2 (1-101)||(13461727-13461827)
chr2 (104-156)||(31001953-31002005)
chr2 (1-101)||(35085052-35085152)
chr2 (99-154)||(23283821-23283877)
chr2 (1-101)||(35091025-35091125)
chr2 (1-101)||(36750101-36750201)
chr2 (100-156)||(44717332-44717388)
chr2 (99-160)||(19879166-19879228)
chr2 (99-156)||(36749990-36750048)
chr2 (99-155)||(23343140-23343197)
chr2 (100-156)||(28683471-28683527)
chr2 (17-101)||(31651318-31651402)
chr2 (99-153)||(13455678-13455733)
chr2 (99-153)||(13461619-13461674)
chr2 (99-156)||(35085205-35085263)
chr2 (100-143)||(35442359-35442402)
chr2 (99-156)||(35091178-35091236)
chr2 (122-156)||(7771717-7771751)
[»] chr1 (29 HSPs)
chr1 (1-101)||(31051231-31051331)
chr1 (1-101)||(31057731-31057831)
chr1 (1-101)||(34739673-34739773)
chr1 (1-101)||(8093218-8093318)
chr1 (1-101)||(44409687-44409787)
chr1 (3-101)||(27954848-27954948)
chr1 (2-101)||(25387878-25387975)
chr1 (1-101)||(38152335-38152430)
chr1 (100-156)||(31051121-31051177)
chr1 (100-156)||(31057621-31057677)
chr1 (1-84)||(12183984-12184069)
chr1 (100-156)||(34739563-34739619)
chr1 (1-101)||(50305884-50305984)
chr1 (2-101)||(25381909-25382008)
chr1 (2-101)||(33458282-33458382)
chr1 (99-156)||(1077820-1077878)
chr1 (3-101)||(25275421-25275519)
chr1 (99-156)||(25382061-25382119)
chr1 (99-156)||(50305773-50305831)
chr1 (1-62)||(1077968-1078031)
chr1 (99-156)||(12184122-12184180)
chr1 (99-156)||(25388028-25388086)
chr1 (99-151)||(25275572-25275625)
chr1 (99-140)||(44409593-44409634)
chr1 (99-156)||(33458432-33458490)
chr1 (117-161)||(8093389-8093434)
chr1 (1-66)||(24927133-24927197)
chr1 (104-156)||(24927299-24927352)
chr1 (100-152)||(38152484-38152535)
[»] chr5 (29 HSPs)
chr5 (1-101)||(7389920-7390020)
chr5 (1-101)||(28525758-28525858)
chr5 (1-101)||(28531854-28531954)
chr5 (1-101)||(41296966-41297066)
chr5 (1-101)||(20499825-20499925)
chr5 (1-101)||(30384756-30384856)
chr5 (1-101)||(30771967-30772069)
chr5 (100-156)||(7390074-7390130)
chr5 (1-101)||(12686551-12686651)
chr5 (1-101)||(12692653-12692753)
chr5 (100-156)||(28525912-28525968)
chr5 (100-156)||(28532008-28532064)
chr5 (1-101)||(32094594-32094694)
chr5 (1-62)||(32097395-32097458)
chr5 (99-156)||(12692806-12692864)
chr5 (99-156)||(30384909-30384967)
chr5 (99-156)||(32094747-32094805)
chr5 (99-156)||(32097547-32097605)
chr5 (99-156)||(41296856-41296913)
chr5 (1-49)||(14609909-14609957)
chr5 (99-156)||(20499714-20499772)
chr5 (99-151)||(12686704-12686757)
chr5 (99-156)||(14609709-14609765)
chr5 (1-101)||(19060143-19060246)
chr5 (32-101)||(14609818-14609887)
chr5 (99-156)||(30771858-30771917)
chr5 (100-150)||(25408488-25408539)
chr5 (104-156)||(26509434-26509487)
chr5 (113-156)||(33753770-33753814)
[»] chr8 (28 HSPs)
chr8 (1-101)||(10699716-10699816)
chr8 (1-101)||(22220100-22220200)
chr8 (1-101)||(39735911-39736011)
chr8 (1-101)||(10705525-10705625)
chr8 (1-101)||(39727657-39727757)
chr8 (7-101)||(42033484-42033578)
chr8 (1-101)||(14417648-14417748)
chr8 (1-101)||(5542533-5542634)
chr8 (100-156)||(39727811-39727867)
chr8 (1-101)||(32890575-32890675)
chr8 (1-101)||(32896699-32896799)
chr8 (99-156)||(14417538-14417595)
chr8 (100-156)||(10699606-10699662)
chr8 (1-62)||(36818696-36818759)
chr8 (100-156)||(39736065-39736120)
chr8 (99-156)||(36818548-36818606)
chr8 (100-156)||(22220254-22220309)
chr8 (100-156)||(42033374-42033430)
chr8 (1-101)||(42993373-42993472)
chr8 (99-156)||(32890464-32890522)
chr8 (99-156)||(32896588-32896646)
chr8 (100-156)||(10705415-10705471)
chr8 (99-156)||(1883363-1883421)
chr8 (99-156)||(42993525-42993583)
chr8 (99-156)||(5542687-5542744)
chr8 (36-74)||(11641418-11641456)
chr8 (1-97)||(17954201-17954295)
chr8 (1-62)||(9935007-9935070)
[»] scaffold0440 (2 HSPs)
scaffold0440 (11-101)||(1570-1660)
scaffold0440 (100-152)||(1714-1766)
[»] scaffold0012 (2 HSPs)
scaffold0012 (11-101)||(173272-173362)
scaffold0012 (99-156)||(173415-173473)
[»] scaffold0064 (2 HSPs)
scaffold0064 (1-101)||(13960-14060)
scaffold0064 (99-156)||(13849-13907)
[»] scaffold0363 (2 HSPs)
scaffold0363 (1-101)||(971-1071)
scaffold0363 (99-156)||(1124-1181)
[»] scaffold0185 (1 HSPs)
scaffold0185 (1-101)||(5654-5756)
[»] scaffold0208 (4 HSPs)
scaffold0208 (1-101)||(6209-6309)
scaffold0208 (1-101)||(12082-12182)
scaffold0208 (99-156)||(6098-6156)
scaffold0208 (99-151)||(11976-12029)
[»] scaffold1114 (2 HSPs)
scaffold1114 (1-101)||(750-850)
scaffold1114 (99-156)||(639-697)


Alignment Details
Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10733722 - 10733822
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10733722 gttaatgggccatccggacatccactcattaagtccatatcaactaatcaaatacttaattaattatccaattagaaatctaatagccttattacttaat 10733821  T
Q  101 t 101  Q
    |    
T  10733822 t 10733822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10947491 - 10947591
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10947491 gttaatgggccatccggacatccactcattaagtccatatcaactaatcaaatacttaattaattatccaattagaaatctaatagccttattacttaat 10947590  T
Q  101 t 101  Q
    |    
T  10947591 t 10947591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10739709 - 10739809
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  10739709 gttaatgggtcatccggacatccactcattaagtccatatcaactaatcaaatacttaattaattatccaatcagaaatctaatagccttattacttaat 10739808  T
Q  101 t 101  Q
    |    
T  10739809 t 10739809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10953478 - 10953578
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  10953478 gttaatgggtcatccggacatccactcattaagtccatatcaactaatcaaatacttaattaattatccaatcagaaatctaatagccttattacttaat 10953577  T
Q  101 t 101  Q
    |    
T  10953578 t 10953578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 48160746 - 48160646
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  48160746 gttaatgggccatccgaacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 48160647  T
Q  101 t 101  Q
    |    
T  48160646 t 48160646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 48166965 - 48166865
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  48166965 gttaatgggccatccgaacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 48166866  T
Q  101 t 101  Q
    |    
T  48166865 t 48166865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26957176 - 26957276
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  26957176 gttaatgagccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagtcttattacttaat 26957275  T
Q  101 t 101  Q
    |    
T  26957276 t 26957276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 6257577 - 6257677
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||| ||||||||||| || ||||||||| |||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||    
T  6257577 gttaatgggccatccggatatccactcattgagcccatatcaattaattaaatatttaattaattatccaattagaaatctaatagctttattacttaat 6257676  T
Q  101 t 101  Q
    |    
T  6257677 t 6257677  T

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Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26971927 - 26972027
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||| |||||||    
T  26971927 gttaatggaccatccagacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatatccttatcacttaat 26972026  T
Q  101 t 101  Q
    |    
T  26972027 t 26972027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44831987 - 44832087
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||| |||||| ||| ||||||||||||||    
T  44831987 gttaatggaccatccggacatgcactcattgagtccatatcaactaattaaatatttaattaattatctaattaaaaatcttataaccttattacttaat 44832086  T
Q  101 t 101  Q
    |    
T  44832087 t 44832087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 50168382 - 50168286
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattactt 97  Q
    ||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  50168382 gttaatgggtcattcggtcatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttgttactt 50168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 50155745 - 50155657
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttat 92  Q
    ||||||||  |||||||||||||||||    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  50155745 gttaatggatcatccggacatccactcg---agtccatatcaactaattaaatatttaattaattatccaattaaaaatctaatagccttat 50155657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17627147 - 17627247
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| ||||| ||||||| |||||| ||||||||| || |||| ||||| ||||||||||||| ||||  ||||||||||| |||||||||||||    
T  17627147 gttaatgggtcatcctgacatcccctcattgagtccatattaattaatcaaatatttaattaattatctaattggaaatctaataggcttattacttaat 17627246  T
Q  101 t 101  Q
    |    
T  17627247 t 17627247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 26957330 - 26957386
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26957330 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 26957386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 48160592 - 48160536
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48160592 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 48160536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 48166811 - 48166755
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48166811 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 48166755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 26972081 - 26972137
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26972081 ttacaatatttgcccacataatgatattggaatataataaataataaaatattccaa 26972137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 6257730 - 6257787
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  6257730 attacgatatttgcccacataatgatattggaatataataaaatataaaatattccaa 6257787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 10733875 - 10733932
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  10733875 attacgatatttgcccacataatgatattggaatataataaaatataaaatattccaa 10733932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 10739862 - 10739919
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  10739862 attacgatatttgcccacataatgatattggaatataataaaatataaaatattccaa 10739919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 10947644 - 10947701
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  10947644 attacgatatttgcccacataatgatattggaatataataaaatataaaatattccaa 10947701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 10953631 - 10953688
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  10953631 attacgatatttgcccacataatgatattggaatataataaaatataaaatattccaa 10953688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 33458716 - 33458772
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  33458716 ttacgataattgcccacataaggatattggaatataataaataataaaatattccaa 33458772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 33461841 - 33461897
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  33461841 ttacgataattgcccacataaagatattggaatataataaataataaaatattccaa 33461897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24287774 - 24287714
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaa 59  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||    
T  24287774 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaatatttaa 24287714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 532110 - 532168
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| | ||||||||||||||||||| || ||||||||||||||||||||    
T  532110 attacgatatttgcctacataatgatattggaatattattaaataataaaatattccaa 532168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 24287621 - 24287563
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||    
T  24287621 attacgatatttgcccacataatgatattgaaatattattaaataataaaatattccaa 24287563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 35177582 - 35177481
Alignment:
Q  2 ttaatgggccatccggacatccactc--attaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaa 99  Q
    ||||| || ||||| ||||| |||||  ||| ||||||| ||||| ||||||||| |||| |||||||| ||||| ||| |||| |||||||||||||||    
T  35177582 ttaataggtcatccagacatacactcgtattgagtccatgtcaacaaattaaatatttaaataattatctaattagaaaactaacagccttattacttaa 35177483  T
Q  100 tt 101  Q
    ||    
T  35177482 tt 35177481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 50168229 - 50168171
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataat-aaataataaaatattccaa 156  Q
    ||||||||||||  | || ||||| |||||||||||||| |||||||||||||||||||    
T  50168229 attacgatattttccgacgtaatgttattggaatataattaaataataaaatattccaa 50168171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3811541 - 3811641
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  3811541 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 3811640  T
Q  101 t 101  Q
    |    
T  3811641 t 3811641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 3817683 - 3817783
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  3817683 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 3817782  T
Q  101 t 101  Q
    |    
T  3817783 t 3817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 339166 - 339068
Alignment:
Q  3 taatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  339166 taatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattatttatccaattagaaatctaatagccttattacttaatt 339068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 351572 - 351474
Alignment:
Q  3 taatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  351572 taatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattatttatccaattagaaatctaatagccttattacttaatt 351474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5849317 - 5849217
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  5849317 gttaatggaccatccgaacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 5849218  T
Q  101 t 101  Q
    |    
T  5849217 t 5849217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35148381 - 35148481
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  35148381 gttaatgagccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatccaatagccttattacttaat 35148480  T
Q  101 t 101  Q
    |    
T  35148481 t 35148481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35152901 - 35153001
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  35152901 gttaatgggtcatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatcgaatagccttattacttaat 35153000  T
Q  101 t 101  Q
    |    
T  35153001 t 35153001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22742302 - 22742402
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  22742302 gttaatgggccatccggacatccactcattgagtccatatcaactacttatatatttaattaattatctaattagaaatctaatagccttattacttaat 22742401  T
Q  101 t 101  Q
    |    
T  22742402 t 22742402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 26383455 - 26383356
Alignment:
Q  2 ttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||| |||||||||||||||||||| |||||||||  | |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  26383455 ttaatgggtcatccggacatccactcattgagtccatattcattaattaaatatttaattaattatccaattagaaatctaatagccttattacttaatt 26383356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42767574 - 42767661
Alignment:
Q  1 gttaatgggccatccggacatccactcatt-aagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagc 87  Q
    ||||||||  ||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  42767574 gttaatggatcatccagacatccactcattgaagtccatatcaactaattaaatatttaattaattatccaattaaaaatctaatagc 42767661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 351420 - 351364
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  351420 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 351364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28421331 - 28421431
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  28421331 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 28421426  T
Q  97 taatt 101  Q
    |||||    
T  28421427 taatt 28421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 35153055 - 35153111
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  35153055 ttacgatatttgcccacataatgacattggaatataataaataataaaatattccaa 35153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 3817837 - 3817893
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||||||||||||    
T  3817837 ttacgatatttgcctacataatgatattgaaatataataaataataaaatattccaa 3817893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 3811695 - 3811753
Alignment:
Q  100 ttacgatatttgtccacataatgatat--tggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  3811695 ttacgatatttgcccacataatgatatattggaatataataaataataaaatattccaa 3811753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 7608213 - 7608146
Alignment:
Q  2 ttaatgggccatccggacatccactcattaagtccatatcaactaatt-aaatacttaattaattatc 68  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||| ||||| |||||||||||||    
T  7608213 ttaatgggtcatccggacatccactcattaaccccatatcaactaattaaaatatttaattaattatc 7608146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 18666881 - 18666958
Alignment:
Q  27 cattaagtccatatcaactaattaaatacttaattaat---tatccaattacaaatctaatagccttattacttaatt 101  Q
    |||| ||||||||||||||||||||| | |||||||||   ||| |||||| ||||||||||||||||||||||||||    
T  18666881 cattgagtccatatcaactaattaaaaatttaattaataactatacaattagaaatctaatagccttattacttaatt 18666958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 35148535 - 35148592
Alignment:
Q  100 ttacgatatttgtcc-acataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||    
T  35148535 ttacgatatttgccccacataatgatattagaatataataaataataaaatattccaa 35148592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 339010 - 338958
Alignment:
Q  104 gatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  339010 gatatttgcccacataatgatattgaaatataagaaataataaaatattccaa 338958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 5979702 - 5979760
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||    
T  5979702 attacgatatttgcccacataatgatattgaaatattattaaataataaaatattccaa 5979760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 18667730 - 18667788
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    |||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||    
T  18667730 attacgatatttgcacacacaatgatattggaatataattaaataataaaatattccaa 18667788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 18657024 - 18657120
Alignment:
Q  2 ttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaa-tagccttattacttaat 100  Q
    |||||||| ||||| |||||||||||||  ||||||||| || |||||   ||  ||||||||||||||| || |||||||| |||||||||||||||||    
T  18657024 ttaatgggtcatccagacatccactcatagagtccatattaattaatt---taaataattaattatccaaataaaaatctaattagccttattacttaat 18657120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 28421484 - 28421537
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatat 151  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  28421484 attacgatatttgcccacataatgatattggaatattattaaataataaaatat 28421537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43539764 - 43539711
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaata 54  Q
    ||||||||| ||||| |||||||||||||| |||||||||||| ||||||||||    
T  43539764 gttaatgggtcatccagacatccactcattgagtccatatcaattaattaaata 43539711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 5849163 - 5849108
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||  ||||||||||||||| ||||||||| ||||||||||||||||||    
T  5849163 ttacgatatttacccacataatgatattagaatataat-aataataaaatattccaa 5849108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 22742456 - 22742508
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatatt 152  Q
    ||||| |||||| | ||||||| ||||||||||||||||||||||||||||||    
T  22742456 ttacggtatttgcctacataataatattggaatataataaataataaaatatt 22742508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 26380838 - 26380795
Alignment:
Q  58 aattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||    
T  26380838 aattaattatccaattagaaatctaatagccttattatttaatt 26380795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 43539628 - 43539569
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataa---taaataataaaatattccaa 156  Q
    ||||||||||||  |||||||||||||||||||||||   |||||||||||| |||||||    
T  43539628 ttacgatatttgcacacataatgatattggaatataaaattaaataataaaacattccaa 43539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5979548 - 5979648
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    |||||| ||||||||| |||||||  |||  | |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  5979548 gttaattggccatccgaacatccatccatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 5979643  T
Q  97 taatt 101  Q
    |||||    
T  5979644 taatt 5979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 26383303 - 26383244
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataat--aaataataaaatattccaa 156  Q
    |||| |||||||| ||||| |||||||||| ||||||||  |||||||||||||||||||    
T  26383303 attatgatatttgcccacaaaatgatattgaaatataattaaaataataaaatattccaa 26383244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 24689768 - 24689729
Alignment:
Q  56 ttaattaattatccaattacaaatctaatagccttattac 95  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  24689768 ttaattaattatcaaattaaaaatctaatagccttattac 24689729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 38023737 - 38023688
Alignment:
Q  104 gatatttgtccacataatgatattggaatataa-taaataataaaatatt 152  Q
    ||||||||| |||||||| |||||| ||||||| ||||||||||||||||    
T  38023737 gatatttgttcacataataatattgaaatataaataaataataaaatatt 38023688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 152
Target Start/End: Complemental strand, 7608058 - 7608022
Alignment:
Q  117 ataatgatattggaatataa-taaataataaaatatt 152  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7608058 ataatgatattggaatataattaaataataaaatatt 7608022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8651176 - 8651276
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  8651176 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagtcttattacttaat 8651275  T
Q  101 t 101  Q
    |    
T  8651276 t 8651276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 31756592 - 31756691
Alignment:
Q  2 ttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  31756592 ttaatgggtcatccggacatccactcattgagtccatatcaactaattaattatttaattaattatccaattagaaatctaatagccttattacttaatt 31756691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21197413 - 21197514
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaa-tagccttattacttaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||    
T  21197413 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattatttatccaattagaaatctaattagccttattacttaa 21197512  T
Q  100 tt 101  Q
    ||    
T  21197513 tt 21197514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21783698 - 21783798
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||  ||||||||||||    
T  21783698 gttaatgggtcatccggacatccactcattaagtccatatcaactaattaaatatttaattaattatccaattagaaatttaatagttttattacttaat 21783797  T
Q  101 t 101  Q
    |    
T  21783798 t 21783798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 21770947 - 21771037
Alignment:
Q  11 catccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||  |||||||||||||    
T  21770947 catccggacatccactcattaagtccatatcaactaattaaatatttaattaattattcaattagaaatctaatagttttattacttaatt 21771037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21789921 - 21789999
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaat 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  21789921 gttaatgggtcatccggacatccactcattaagtccatatcaactaattaaatatttaattaattatccaattagaaat 21789999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21191242 - 21191343
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaa-tagccttattacttaa 99  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||| |||||||| ||||| ||||||||||    
T  21191242 gttaatgggccatccgaacatccactcattgaatccatatcaactaattaaatatttaattatttatccaattagaaatctaattagccatattacttaa 21191341  T
Q  100 tt 101  Q
    ||    
T  21191342 tt 21191343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 30905963 - 30906049
Alignment:
Q  11 catccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattactt 97  Q
    ||||| |||||| ||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  30905963 catccagacatctactcatagagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattactt 30906049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 21771091 - 21771147
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21771091 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 21771147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 8651330 - 8651386
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8651330 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 8651386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 6096943 - 6096885
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaata 158  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6096943 ttactatatttgcccacataatgatattggaatataataaataataaaatattccaata 6096885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 6097068 - 6096997
Alignment:
Q  31 aagtccatatcaactaattaaatacttaattaattatc-caattacaaatctaatagccttattacttaatt 101  Q
    |||||||||||||||||||||||| |||||||||||||  ||||| |||| |||||||||||||||||||||    
T  6097068 aagtccatatcaactaattaaatatttaattaattatcaaaattagaaatttaatagccttattacttaatt 6096997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 17581238 - 17581180
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  17581238 attacgatatttgcccacataatgatattggaatataattaaataataaaatattccaa 17581180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 4580695 - 4580794
Alignment:
Q  2 ttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattactt 97  Q
    |||||||| |||||||||||||||||||  | |||||||||||||||||||||    ||||||||||||| || || |||||||| ||||||||||||||    
T  4580695 ttaatgggtcatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattactt 4580790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25353998 - 25353900
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatccaattacaaatctaat-agccttattactt 97  Q
    |||||||||||||||||| ||||||||||  | |||||||||||||||||||||||    |||||||||||||  | ||||||||| |||||||||||||    
T  25353998 gttaatgggccatccggatatccactcatgttgagtccatatcaactaattaaata----attaattatccaaa-ataaatctaattagccttattactt 25353904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 25343261 - 25343203
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  25343261 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 25343203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 30906106 - 30906164
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataat-aaataataaaatattccaa 156  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||    
T  30906106 attacgatatttgcccacataatgatattgaaatataataaaataataaaatattccaa 30906164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 17581356 - 17581291
Alignment:
Q  36 catatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    ||||||||||||||||||| ||||||||||||||||||| ||   |||||| ||||||||||||||    
T  17581356 catatcaactaattaaatatttaattaattatccaattagaaccataatagtcttattacttaatt 17581291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25343412 - 25343314
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatccaattacaaatctaat-agccttattactt 97  Q
    |||||||| ||||||| ||||||||||||  | |||||||||||||||||||||||    |||||||||||||  | ||||||||| |||||||||||||    
T  25343412 gttaatggaccatccgaacatccactcatgttgagtccatatcaactaattaaata----attaattatccaaa-ataaatctaattagccttattactt 25343318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 4580847 - 4580905
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||    
T  4580847 attacgatatttgcccacataatgatattggaatattattaattaataaaatattccaa 4580905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1106101 - 1106000
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaa-ttaaatacttaattaattatccaattacaaatctaatagccttattacttaa 99  Q
    ||||||| | |||||||||||||||||||| | ||||||| || ||| ||||||| ||||||||||||  | ||| |||| |||||||||||| | ||||    
T  1106101 gttaatgagtcatccggacatccactcattgaatccatattaattaatttaaatatttaattaattatgtagttaaaaatttaatagccttatcatttaa 1106002  T
Q  100 tt 101  Q
    ||    
T  1106001 tt 1106000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 31756738 - 31756791
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattc 153  Q
    |||| |||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  31756738 ttacaatatttatccacataataatattgaaatataataaataataaaatattc 31756791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 32030014 - 32030049
Alignment:
Q  121 tgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||||||||||||||||||||||||||    
T  32030014 tgatattggaatataataaataataaaatattccaa 32030049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 21191396 - 21191453
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||||||    
T  21191396 attacgatatttgcccacataatgata-tggaatattattaaataataaaatattccaa 21191453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 21783851 - 21783905
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattc 153  Q
    ||||||||||||  ||||||||| ||||| |||||||||||||||| ||||||||    
T  21783851 attacgatatttacccacataataatattagaatataataaataattaaatattc 21783905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 25353847 - 25353789
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaata 158  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||  ||||||||||||    
T  25353847 attacgatatttgcccacataatgatattggaatattattaaataat--aatattccaata 25353789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17581423 - 17581384
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatat 40  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  17581423 gttaatgggtcatccggacatccactcattgagtccatat 17581384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 156
Target Start/End: Original strand, 32044505 - 32044535
Alignment:
Q  126 ttggaatataataaataataaaatattccaa 156  Q
    |||||||||||||||||||||||||||||||    
T  32044505 ttggaatataataaataataaaatattccaa 32044535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 1283325 - 1283280
Alignment:
Q  38 tatcaactaattaaatacttaattaattatccaattacaaatctaa 83  Q
    |||||| ||||||||||  |||||||||||||||||| ||||||||    
T  1283325 tatcaattaattaaatatataattaattatccaattagaaatctaa 1283280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10761023 - 10761123
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  10761023 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 10761122  T
Q  101 t 101  Q
    |    
T  10761123 t 10761123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10769342 - 10769442
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  10769342 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 10769441  T
Q  101 t 101  Q
    |    
T  10769442 t 10769442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38449436 - 38449536
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  38449436 gttaatgggtcatccggacatccactcattaagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 38449535  T
Q  101 t 101  Q
    |    
T  38449536 t 38449536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38455923 - 38456023
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  38455923 gttaatgggtcatccggacatccactcattaagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 38456022  T
Q  101 t 101  Q
    |    
T  38456023 t 38456023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23138789 - 23138889
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  23138789 gttaatgggtcatccggacatccactcattaagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagtcttattacttaat 23138888  T
Q  101 t 101  Q
    |    
T  23138889 t 23138889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 49151399 - 49151299
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  49151399 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaacagccttattacttaat 49151300  T
Q  101 t 101  Q
    |    
T  49151299 t 49151299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 49157466 - 49157366
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  49157466 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaacagccttattacttaat 49157367  T
Q  101 t 101  Q
    |    
T  49157366 t 49157366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30051473 - 30051573
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||||    
T  30051473 gttaatgggccatccggacatccactcgttaagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatatctttattacttaat 30051572  T
Q  101 t 101  Q
    |    
T  30051573 t 30051573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8331574 - 8331474
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||    
T  8331574 gttaatgggtcatccggacatccactcattaagtccatatcaactgattaaatatttaattaattatccaattagaaatcttatatccttattacttaat 8331475  T
Q  101 t 101  Q
    |    
T  8331474 t 8331474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28964667 - 28964567
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||||    
T  28964667 gttaatggaccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaataactttattacttaat 28964568  T
Q  101 t 101  Q
    |    
T  28964567 t 28964567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11846349 - 11846450
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaa-tagccttattacttaa 99  Q
    |||||||||||||||||||||||||||||| | || |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  11846349 gttaatgggccatccggacatccactcattgactcaatatcaactaattaaatatttaattaattatccaattagaaatctaattagccttattacttaa 11846448  T
Q  100 tt 101  Q
    ||    
T  11846449 tt 11846450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46656467 - 46656367
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||| || |||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||    
T  46656467 gttaataggtcatccggacatccactcatcgagtacatatcaactaattaaatatttaattaattatccaattagaaatctaatagctttattacttaat 46656368  T
Q  101 t 101  Q
    |    
T  46656367 t 46656367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 53071640 - 53071724
Alignment:
Q  17 gacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||||||||| ||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||    
T  53071640 gacatccactcattgagttcatatcaactaattaaatattcaattaattatccaattagaaatctaatagccttattacttaatt 53071724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 8331420 - 8331364
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8331420 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 8331364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 24643885 - 24643963
Alignment:
Q  23 cactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    ||||| || |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  24643885 cactcgttgagtccatatcaattaattaaatatttaattaattatccaattagaaatctaatagccttgttacttaatt 24643963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 10761177 - 10761233
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10761177 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 10761233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 10769496 - 10769552
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10769496 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 10769552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 23138943 - 23138999
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23138943 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 23138999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 30051627 - 30051683
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30051627 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 30051683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 38456077 - 38456133
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38456077 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 38456133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10238585 - 10238685
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  10238585 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 10238680  T
Q  97 taatt 101  Q
    |||||    
T  10238681 taatt 10238685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10244707 - 10244807
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  10244707 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 10244802  T
Q  97 taatt 101  Q
    |||||    
T  10244803 taatt 10244807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11840098 - 11840198
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  11840098 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 11840193  T
Q  97 taatt 101  Q
    |||||    
T  11840194 taatt 11840198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 38449590 - 38449646
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  38449590 ttacgatatttgcccacataatgatattggaatataataaataaaaaaatattccaa 38449646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42191593 - 42191693
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  42191593 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 42191688  T
Q  97 taatt 101  Q
    |||||    
T  42191689 taatt 42191693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42197535 - 42197635
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  42197535 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 42197630  T
Q  97 taatt 101  Q
    |||||    
T  42197631 taatt 42197635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 49151245 - 49151189
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  49151245 ttacgatattttcccacataatgatattggaatataataaataataaaatattccaa 49151189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 49157312 - 49157256
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  49157312 ttacgatattttcccacataatgatattggaatataataaataataaaatattccaa 49157256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 55003927 - 55003985
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  55003927 attacgatatttgtccacataatgatattggaatattattaaataataaaatattccaa 55003985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 9586538 - 9586595
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  9586538 attacgatatttgcccacataatgatattggaatataataaaatataaaatattccaa 9586595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 34300190 - 34300125
Alignment:
Q  36 catatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||| |||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||    
T  34300190 catatcaattaattaaatatttaattaattatccaattaaaaatttaatagtcttattacttaatt 34300125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26429790 - 26429890
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || || ||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  26429790 gttaatgggccatccggacatccactcatgttgagcccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 26429885  T
Q  97 taatt 101  Q
    |||||    
T  26429886 taatt 26429890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 55003774 - 55003874
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  55003774 gttaatgggtcatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 55003869  T
Q  97 taatt 101  Q
    |||||    
T  55003870 taatt 55003874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 10238738 - 10238796
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  10238738 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 10238796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 11840251 - 11840309
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  11840251 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 11840309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 17056317 - 17056375
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  17056317 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 17056375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 28964513 - 28964468
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataata 145  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  28964513 ttacgatatttgcccacataatgatattggaatataataaataata 28964468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 42191746 - 42191801
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattc 153  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  42191746 attacgatatttgcccacataatgatattggaatattattaaataataaaatattc 42191801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 42197688 - 42197743
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattc 153  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  42197688 attacgatatttgcccacataatgatattggaatattattaaataataaaatattc 42197743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 10244860 - 10244918
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||    
T  10244860 attacgatatttgcccacataatgatattgaaatattattaaataataaaatattccaa 10244918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 17056174 - 17056264
Alignment:
Q  11 catccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattacttaatt 101  Q
    |||||||||||||||||||  | |||||||||||||||||||||    ||||||||||||| || || |||||||| ||||||||||||||||||    
T  17056174 catccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattacttaatt 17056264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24644021 - 24644074
Alignment:
Q  104 gatatttgtccacataatgatattggaatataat-aaataataaaatattccaa 156  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  24644021 gatatttgcccacataataatattggaatataataaaataataaaatattccaa 24644074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 8474543 - 8474607
Alignment:
Q  37 atatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    ||||||| |||||||||| ||||||||||||  ||||| |||||||||| | |||||||||||||    
T  8474543 atatcaattaattaaatatttaattaattattgaattataaatctaataacattattacttaatt 8474607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17601906 - 17602006
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||| ||| |||||||||| ||||  | |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  17601906 gttaatgggtcattcggacatccaatcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 17602001  T
Q  97 taatt 101  Q
    |||||    
T  17602002 taatt 17602006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 8474661 - 8474716
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataa-taaataataaaatattc 153  Q
    |||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||    
T  8474661 attacgatatttgttcacataatgatatcgaaatataattaaataataaaatattc 8474716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 11846503 - 11846560
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||||||    
T  11846503 attacgatatttgcccacataatgata-tggaatattattaaataataaaatattccaa 11846560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 26429943 - 26430001
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||| ||||| || |||||||||||| |||||||    
T  26429943 attacgatatttgcccacataatgatattagaatattattaaataataaaacattccaa 26430001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 48128412 - 48128451
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatat 40  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  48128412 gttaatgggtcatccggacatccactcattgagtccatat 48128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 2982634 - 2982680
Alignment:
Q  37 atatcaactaattaaatacttaattaattatccaattacaaatctaa 83  Q
    |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  2982634 atatcaactaattaaatatttaattaatttttcaattagaaatctaa 2982680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 27103272 - 27103334
Alignment:
Q  36 catatcaactaattaaatacttaattaattatccaattacaaatc-taatagccttattactt 97  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||| |||| | ||||||||||    
T  27103272 catatcaattaattaaatatttaattaattatccaatttaaaatcttaattgtcttattactt 27103334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 53071793 - 53071826
Alignment:
Q  123 atattggaatataataaataataaaatattccaa 156  Q
    |||||| |||||||||||||||||||||||||||    
T  53071793 atattgaaatataataaataataaaatattccaa 53071826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35439743 - 35439843
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  35439743 gttaatgggccatccggacatccactcattaagttcatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 35439842  T
Q  101 t 101  Q
    |    
T  35439843 t 35439843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35442205 - 35442305
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  35442205 gttaatgggtcatccggacatccactcattaagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 35442304  T
Q  101 t 101  Q
    |    
T  35442305 t 35442305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44717178 - 44717278
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  44717178 gttaatgggccatccggacatccactcattaagtccatatcaactaattatatatttaattaattatccaattagaaatctaatagccttattacttaat 44717277  T
Q  101 t 101  Q
    |    
T  44717278 t 44717278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31002163 - 31002063
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  31002163 gttaatgggtcatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 31002064  T
Q  101 t 101  Q
    |    
T  31002063 t 31002063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 13150062 - 13150162
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  13150062 gttaatgggtcatccgtacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 13150161  T
Q  101 t 101  Q
    |    
T  13150162 t 13150162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28683317 - 28683417
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||    
T  28683317 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatgtttaattatttatccaattagaaatctaatagccttattacttaat 28683416  T
Q  101 t 101  Q
    |    
T  28683417 t 28683417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 30965114 - 30965014
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  30965114 gttaatgggccatccggacatccactcattgaatccatatcaactaattaaatatttaattaattatccaattagaaatctaatagtcttattacttaat 30965015  T
Q  101 t 101  Q
    |    
T  30965014 t 30965014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31008141 - 31008041
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  31008141 gttaatgggtcattcggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 31008042  T
Q  101 t 101  Q
    |    
T  31008041 t 31008041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 11048927 - 11049076
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||| | ||||||||     ||||||  | ||    
T  11048927 gttaatgggtcatccagacatccacccattgagtccatatcaactaattaaatatttaattaattatctaatcagaaatctaa-----ttatta--ttat 11049019  T
Q  101 tacgatatttgtccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||    
T  11049020 tacgatatttgcccacataataatattggaatataattaaataataaaatattccaa 11049076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 19879381 - 19879281
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||| |||||| |||||||| |||| ||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||    
T  19879381 gttaatgggtcatctggacattcactcattgagtcaatatcaattaattaaatatttaattatttatccaattagaaatctaatagccttattacttaat 19879282  T
Q  101 t 101  Q
    |    
T  19879281 t 19879281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7771558 - 7771659
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtcca-tatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaa 99  Q
    ||||||||| ||||||||| |||||||||  |||||  ||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  7771558 gttaatgggtcatccggacgtccactcatcgagtcccgtatcaactaattaaatatttaattaattatccaattagaaatctaatagctttattacttaa 7771657  T
Q  100 tt 101  Q
    ||    
T  7771658 tt 7771659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 40553056 - 40552995
Alignment:
Q  158 agatgttcctcttatagtgccagaaaatagtcatgcagtgggtgattgtgacaagggtattg 219  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40553056 agatgttccttttatagtgccagaaaatagtcatgcagtgggtgattgtgacaagggtattg 40552995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 30964960 - 30964904
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30964960 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 30964904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 35439897 - 35439953
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35439897 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 35439953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 29832966 - 29832892
Alignment:
Q  27 cattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||| || |||||||| ||||||||||||||    
T  29832966 cattgagtccatatcaattaattaaatatttaattaattatccaattaaaagtctaatagtcttattacttaatt 29832892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 13150216 - 13150272
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  13150216 ttacgatatttgcccacataatgatattgaaatataataaataataaaatattccaa 13150272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13455886 - 13455786
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  13455886 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 13455791  T
Q  97 taatt 101  Q
    |||||    
T  13455790 taatt 13455786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13461827 - 13461727
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  13461827 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 13461732  T
Q  97 taatt 101  Q
    |||||    
T  13461731 taatt 13461727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 31002005 - 31001953
Alignment:
Q  104 gatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31002005 gatatttgcccacataatgatattggaatataataaataataaaatattccaa 31001953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35085052 - 35085152
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  35085052 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 35085147  T
Q  97 taatt 101  Q
    |||||    
T  35085148 taatt 35085152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 23283877 - 23283821
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataat-aaataataaaatattcc 154  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  23283877 attacgatatttgtccacataatgatattgaaatataataaaataataaaatattcc 23283821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35091025 - 35091125
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||| ||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  35091025 gttaatgggccatccggacatccactcatgttgagtctatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 35091120  T
Q  97 taatt 101  Q
    |||||    
T  35091121 taatt 35091125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 36750201 - 36750101
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatccaat-tacaaatctaat-agccttattact 96  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||||||||    ||||| |||||||  || ||||||||| ||||||||||||    
T  36750201 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaata----attaaatatccaaaatagaaatctaattagccttattact 36750106  T
Q  97 taatt 101  Q
    |||||    
T  36750105 taatt 36750101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 44717332 - 44717388
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  44717332 ttacgatatgtgcccacataatgatattggaatataataaatcataaaatattccaa 44717388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 19879228 - 19879166
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataat-aaataataaaatattccaataga 160  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  19879228 attacgatattttcccacataatgatattggaatataataaaatattaaaatattccaataga 19879166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 36750048 - 36749990
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  36750048 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 36749990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 23343197 - 23343140
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataat-aaataataaaatattcca 155  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  23343197 attatgatatttgtccacataatgatattagaatataataaaataataaaatattcca 23343140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 28683471 - 28683527
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| |||||||||||||||   ||||||||||||||||||||||||||    
T  28683471 ttacgatatttgcccacataatgatattaagatataataaataataaaatattccaa 28683527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 31651402 - 31651318
Alignment:
Q  17 gacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||||||||||| |  || ||||||||| |  |||||||||||||    
T  31651402 gacatcgactcattgagtccatatcaattaattaaatatttaattaattatctacataaaaatctaattgatttattacttaatt 31651318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 13455733 - 13455678
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattc 153  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  13455733 attacgatatttgcccacataatgatattggaatattattaaataataaaatattc 13455678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 13461674 - 13461619
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattc 153  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  13461674 attacgatatttgcccacataatgatattggaatattattaaataataaaatattc 13461619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 35085205 - 35085263
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||    
T  35085205 attacgatatttgcccacataatgatattggaatattattaaataataaaacattccaa 35085263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 35442359 - 35442402
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataa 143  Q
    |||||||||||  |||||||||||||||||||||||||||||||    
T  35442359 ttacgatatttacccacataatgatattggaatataataaataa 35442402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 35091178 - 35091236
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||  ||||||||||||||||||||| || |||||||||||| |||||||    
T  35091178 attacgatatttacccacataatgatattggaatattattaaataataaaacattccaa 35091236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 7771717 - 7771751
Alignment:
Q  122 gatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||||||||||| |||||||||||||    
T  7771717 gatattggaatataataaatagtaaaatattccaa 7771751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31051331 - 31051231
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  31051331 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 31051232  T
Q  101 t 101  Q
    |    
T  31051231 t 31051231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31057831 - 31057731
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  31057831 gttaatgggtcatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 31057732  T
Q  101 t 101  Q
    |    
T  31057731 t 31057731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34739773 - 34739673
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||    
T  34739773 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattatttatccaattagaaatctaatagccttattacttaat 34739674  T
Q  101 t 101  Q
    |    
T  34739673 t 34739673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8093218 - 8093318
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||    
T  8093218 gttaatgggtcatccggacatccactcattgagtccatatcaactaattaaacatttaattaattatccaattagaaatctaatagccttattacttaat 8093317  T
Q  101 t 101  Q
    |    
T  8093318 t 8093318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44409787 - 44409687
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||||    
T  44409787 gttaatgggccatccggacatccactcattgagtccatattaactaattaaatatttaattaattatccaattagaaacctaatagccttattacctaat 44409688  T
Q  101 t 101  Q
    |    
T  44409687 t 44409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 27954948 - 27954848
Alignment:
Q  3 taatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||| |||||||  ||||||||||||  | ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  27954948 taatgagccatccatacatccactcatattgagtccatatcaactaattaaatatttaattaattatcaaattagaaatctaatagccttattacttaat 27954849  T
Q  101 t 101  Q
    |    
T  27954848 t 27954848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 25387878 - 25387975
Alignment:
Q  2 ttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattacttaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| || || |||||||| ||||||||||||||||    
T  25387878 ttaatgggccatccggacatccactcattaagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattacttaa 25387973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38152335 - 38152430
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| ||||||||||||     ||| ||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  38152335 gttaatgggtcatccggacatc-----attgagttcatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 38152429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 31051177 - 31051121
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31051177 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 31051121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 31057677 - 31057621
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31057677 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 31057621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12183984 - 12184069
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatccaattacaaatctaat 84  Q
    |||||| ||||||||||||||| ||||||  | ||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  12183984 gttaattggccatccggacatctactcatattgagtccatatcaactaattaaatatttaattaattatccaaatagaaatctaat 12184069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 34739619 - 34739563
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  34739619 ttacgatattttcccacataatgatattggaatataataaataataaaatattccaa 34739563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 50305984 - 50305884
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  50305984 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 50305889  T
Q  97 taatt 101  Q
    |||||    
T  50305888 taatt 50305884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 25381909 - 25382008
Alignment:
Q  2 ttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattactt 97  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| ||||||||||||||    
T  25381909 ttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattactt 25382004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 33458282 - 33458382
Alignment:
Q  2 ttaatgggccatccggacatccactcat-taagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||  ||||||||||||||||||  | |||||||||||  |||||||||| |||| |||||||| | ||| |||||||||||| ||||||||||||    
T  33458282 ttaatggatcatccggacatccactcacattagtccatatcagttaattaaatatttaagtaattatctagttagaaatctaatagcattattacttaat 33458381  T
Q  101 t 101  Q
    |    
T  33458382 t 33458382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 1077878 - 1077820
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  1077878 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 1077820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 25275421 - 25275519
Alignment:
Q  3 taatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattactta 98  Q
    ||||||| |||||||||||||||||||  | |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||||    
T  25275421 taatgggtcatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattactta 25275516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 25382061 - 25382119
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  25382061 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 25382119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 50305831 - 50305773
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  50305831 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 50305773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1078031 - 1077968
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaatta 62  Q
    ||||||||| |||||||||||||||||||  | ||||||||||||||||||||||| |||||||    
T  1078031 gttaatgggtcatccggacatccactcatgttgagtccatatcaactaattaaataattaatta 1077968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 12184122 - 12184180
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||    
T  12184122 attacgatatttgcccacataatgatattgaaatattattaaataataaaatattccaa 12184180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 25388028 - 25388086
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||    
T  25388028 attacgatatttgcccacataatgatattggaatattattaattaataaaatattccaa 25388086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 25275572 - 25275625
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatat 151  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  25275572 attacgatatttgcccacataatgatattggaatattattaaataataaaatat 25275625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 44409634 - 44409593
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaa 140  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  44409634 attacgatatttgcccacataatgatattggaatataataaa 44409593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 33458432 - 33458490
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    |||| |||||||||||||||| ||||||  |||||||| ||||||||||||||||||||    
T  33458432 attatgatatttgtccacatactgatatcagaatataattaaataataaaatattccaa 33458490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 8093389 - 8093434
Alignment:
Q  117 ataatgatattggaatataa-taaataataaaatattccaatagat 161  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||    
T  8093389 ataatgatattggaatataattaaataataaaatattccaacagat 8093434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24927133 - 24927197
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaatta 66  Q
    ||||||||||||||| ||||||||| |||| |||||||||| | ||||||| || |||||||||||    
T  24927133 gttaatgggccatccagacatccac-cattgagtccatatccattaattaattaattaattaatta 24927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 24927299 - 24927352
Alignment:
Q  104 gatatttgtccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    |||||||| ||||||||||  |||||||||||| |||||| |||||||||||||    
T  24927299 gatatttgcccacataatgtcattggaatataattaaatattaaaatattccaa 24927352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 38152484 - 38152535
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatatt 152  Q
    |||| ||||||||||  |||||||||||| ||||||||||| |||||||||||    
T  38152484 ttacaatatttgtccg-ataatgatattgaaatataataaagaataaaatatt 38152535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7389920 - 7390020
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  7389920 gttaatgggtcatccgaacatccactcattaagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 7390019  T
Q  101 t 101  Q
    |    
T  7390020 t 7390020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28525758 - 28525858
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  28525758 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaacagccttattacttaat 28525857  T
Q  101 t 101  Q
    |    
T  28525858 t 28525858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28531854 - 28531954
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  28531854 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaacagccttattacttaat 28531953  T
Q  101 t 101  Q
    |    
T  28531954 t 28531954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41297066 - 41296966
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  41297066 gttaatgggtcatccggacatccactcattgagtccatatcaattaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 41296967  T
Q  101 t 101  Q
    |    
T  41296966 t 41296966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20499925 - 20499825
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||  | || ||||||||||| |||||||||||||    
T  20499925 gttaatgggccatccagacatccactcattgagtccatatcaattaattaaatatttaattaattatcttactagaaatctaatagtcttattacttaat 20499826  T
Q  101 t 101  Q
    |    
T  20499825 t 20499825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30384756 - 30384856
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||| | ||||| |||||||||||||| | |||||||| | |||| ||||| ||||||||||||| ||||| ||||| |||||||||||||||||||    
T  30384756 gttaatgagtcatccagacatccactcattgaatccatatctattaatgaaatatttaattaattatctaattagaaatccaatagccttattacttaat 30384855  T
Q  101 t 101  Q
    |    
T  30384856 t 30384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 30772069 - 30771967
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattactta 98  Q
    ||||||||| ||||| |||||||||||||  | |||||||||||||||||||| || ||||||||||||||||| | |||  | ||||||||||||||||    
T  30772069 gttaatgggtcatccagacatccactcatattgagtccatatcaactaattaattatttaattaattatccaataagaaactttatagccttattactta 30771970  T
Q  99 att 101  Q
    |||    
T  30771969 att 30771967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 7390074 - 7390130
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  7390074 ttacgatattttcccacataatgatattggaatataataaataataaaatattccaa 7390130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12686551 - 12686651
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  12686551 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 12686646  T
Q  97 taatt 101  Q
    |||||    
T  12686647 taatt 12686651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12692653 - 12692753
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  12692653 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 12692748  T
Q  97 taatt 101  Q
    |||||    
T  12692749 taatt 12692753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 28525912 - 28525968
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  28525912 ttacgatattttcccacataatgatattggaatataataaataataaaatattccaa 28525968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 28532008 - 28532064
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  28532008 ttacgatattttcccacataatgatattggaatataataaataataaaatattccaa 28532064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32094594 - 32094694
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||| |||||||  | |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  32094594 gttaatgggccatccggacatacactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 32094689  T
Q  97 taatt 101  Q
    |||||    
T  32094690 taatt 32094694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32097395 - 32097458
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaatta 62  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||    
T  32097395 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaataattaatta 32097458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 12692806 - 12692864
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  12692806 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 12692864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 30384909 - 30384967
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataat-aaataataaaatattccaa 156  Q
    ||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  30384909 attacaatatttgtccacataatgatatcggaatataataaaataataaaatattccaa 30384967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 32094747 - 32094805
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  32094747 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 32094805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 32097547 - 32097605
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  32097547 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 32097605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 41296913 - 41296856
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||    
T  41296913 attacgatatttgcccacataatgatattgtaatataataaaatataaaatattccaa 41296856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14609957 - 14609909
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaatt 49  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  14609957 gttaatgggccatccggacatccactcattgagtccatatcaattaatt 14609909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 20499772 - 20499714
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||    
T  20499772 attacgatatttgtccatataatgatgttgaaatataattaaataataaaatattccaa 20499714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 12686704 - 12686757
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatat 151  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  12686704 attacgatatttgcccacataatgatattggaatattattaaataataaaatat 12686757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 14609765 - 14609709
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||    
T  14609765 attacgatatttgcacacataatgatattggaatat-ttaaataataaaatattccaa 14609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19060143 - 19060246
Alignment:
Q  1 gttaatgggccatccggacatccactc--attaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaat-agccttattactt 97  Q
    ||||||||| ||||| |||||||||||  ||| |||||||||| | ||||||| || |||||||||  || || || ||||||||| |||||||||||||    
T  19060143 gttaatgggacatccagacatccactcatattgagtccatatccattaattaattaattaattaatattctaaatagaaatctaataagccttattactt 19060242  T
Q  98 aatt 101  Q
    ||||    
T  19060243 aatt 19060246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 14609887 - 14609818
Alignment:
Q  32 agtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||||||| |||||||||  |||||||||||||  | || |||||||||||  |||||||||||||    
T  14609887 agtccatatcaattaattaaatgtttaattaattatcttactagaaatctaatagttttattacttaatt 14609818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 30771917 - 30771858
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaa--taataaaatattccaa 156  Q
    ||||||||||||| |||||||||||||||| |||||| ||||   |||||||||||||||    
T  30771917 attacgatatttgcccacataatgatattgaaatatagtaaaacaaataaaatattccaa 30771858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 25408488 - 25408539
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaata-taataaataataaaata 150  Q
    ||||||||||||||||||||||||||| | |||| || ||||||||||||||    
T  25408488 ttacgatatttgtccacataatgatatcgaaatattattaaataataaaata 25408539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 26509487 - 26509434
Alignment:
Q  104 gatatttgtccacataatgatattggaatataat-aaataataaaatattccaa 156  Q
    |||||||| |||| |||||| | ||||||||||| |||||||||||||||||||    
T  26509487 gatatttgcccacttaatgacaatggaatataataaaataataaaatattccaa 26509434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 33753770 - 33753814
Alignment:
Q  113 ccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||    
T  33753770 ccacataatgatattgaaatataattaaataataaaataatccaa 33753814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10699816 - 10699716
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  10699816 gttaatgggtcatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagcctaattacttaat 10699717  T
Q  101 t 101  Q
    |    
T  10699716 t 10699716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22220100 - 22220200
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||    
T  22220100 gttaatgggccatccggacatccattcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatacccttattacttaat 22220199  T
Q  101 t 101  Q
    |    
T  22220200 t 22220200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39735911 - 39736011
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  39735911 gttaatgggtcatccggacatccactgattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaat 39736010  T
Q  101 t 101  Q
    |    
T  39736011 t 39736011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10705625 - 10705525
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||  ||||||||||||    
T  10705625 gttaatgggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattattcaattagaaatctaatagttttattacttaat 10705526  T
Q  101 t 101  Q
    |    
T  10705525 t 10705525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39727657 - 39727757
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    |||||||||| ||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  39727657 gttaatgggctatccggacatccactcattgagtccatatcaattaattaaatatttaattaattatccaattagaaatttaatagccttattacttaat 39727756  T
Q  101 t 101  Q
    |    
T  39727757 t 39727757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 42033578 - 42033484
Alignment:
Q  7 gggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  42033578 gggccatccggacatccactcattgagtccatatcaactaattaaatatttaattaattatctaattagaaatctaataaccttattacttaatt 42033484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14417748 - 14417648
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||| ||||||||||||| || |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  14417748 gttaatgggacatccgaacatccactcattgagcccatatcaactaattaaatattcaattaattatccaattagaaatctaatagccttattacttaat 14417649  T
Q  101 t 101  Q
    |    
T  14417648 t 14417648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5542533 - 5542634
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaa-tagccttattacttaa 99  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||| ||| ||||||||||||    
T  5542533 gttaatgggtcatccggacatccactcattgagtccatatcaactaattaaatatttaattatttatccaattagaaatctaattagtcttattacttaa 5542632  T
Q  100 tt 101  Q
    ||    
T  5542633 tt 5542634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 39727811 - 39727867
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39727811 ttacgatatttgcccacataatgatattggaatataataaataataaaatattccaa 39727867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32890675 - 32890575
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  32890675 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 32890580  T
Q  97 taatt 101  Q
    |||||    
T  32890579 taatt 32890575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32896799 - 32896699
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  32896799 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 32896704  T
Q  97 taatt 101  Q
    |||||    
T  32896703 taatt 32896699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 14417595 - 14417538
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  14417595 attacgatattttcccacataatgatattggtatataataaataataaaatattccaa 14417538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 10699662 - 10699606
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  10699662 ttacgatatttgcccacataatgatattggaatataataaataataagctattccaa 10699606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36818759 - 36818696
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaatta 62  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||    
T  36818759 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaataattaatta 36818696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 39736065 - 39736120
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  39736065 ttacgatatttgtccacataataatat-ggaatataataaataataaaatattccaa 39736120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 36818606 - 36818548
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  36818606 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 36818548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 22220254 - 22220309
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  22220254 ttacgatatttgcccacataatgatattggaatataat-agtaataaaatattccaa 22220309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 42033430 - 42033374
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||||  || ||||||||||||| |||||||||||||||||||||||||||    
T  42033430 ttacgatatttacccgcataatgatattgaaatataataaataataaaatattccaa 42033374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42993373 - 42993472
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    |||||||||||||| ||||||||||||||  | |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  42993373 gttaatgggccatc-ggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 42993467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 32890522 - 32890464
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||    
T  32890522 attacgatatttgcccacataatgatattggaatattattaaataataaaacattccaa 32890464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 32896646 - 32896588
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||    
T  32896646 attacgatatttgcccacataatgatattggaatattattaaataataaaacattccaa 32896588  T

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Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 10705471 - 10705415
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    |||||||||| | ||||| ||||||||||||||||||||||||| ||| ||||||||    
T  10705471 ttacgatattcgcccacaaaatgatattggaatataataaataacaaactattccaa 10705415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 1883363 - 1883421
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    ||||||||||||| || ||||||  ||||||||||||| ||||||||||||||||||||    
T  1883363 attacgatatttgcccgcataatattattggaatataattaaataataaaatattccaa 1883421  T

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Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 42993525 - 42993583
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||| ||||||||||||||||| || |||||||||||| |||||||    
T  42993525 attacgatatttgcccatataatgatattggaatattattaaataataaaacattccaa 42993583  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 5542687 - 5542744
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||| | ||||| || ||||||||||||||||||||    
T  5542687 attacgatatttgcccacataatgata-tagaatattattaaataataaaatattccaa 5542744  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 11641456 - 11641418
Alignment:
Q  36 catatcaactaattaaatacttaattaattatccaatta 74  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  11641456 catatcaattaattaaatatttaattaattatccaatta 11641418  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 17954295 - 17954201
Alignment:
Q  1 gttaatgggccatccggacatccactcatta--agtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattactt 97  Q
    |||| |||| |||| | |||||||||||||   |||||||||||||||||||| || |||||||||||    | || ||||||||||| ||||||||||    
T  17954295 gttagtgggtcatctgaacatccactcattttgagtccatatcaactaattaattaattaattaatta----aatagaaatctaataggcttattactt 17954201  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9935070 - 9935007
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaatta 62  Q
    ||||||||| |||||||| ||||||||||  | ||||||||||||  ||||||||| |||||||    
T  9935070 gttaatgggtcatccggatatccactcatgttgagtccatatcaataaattaaataattaatta 9935007  T

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Target: scaffold0440 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 1570 - 1660
Alignment:
Q  11 catccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  1570 catccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaatt 1660  T

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Target: scaffold0440; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 1714 - 1766
Alignment:
Q  100 ttacgatatttgtccacataatgatattggaatataataaataataaaatatt 152  Q
    |||||||||||  ||||||||| |||||| |||||||||||||||||||||||    
T  1714 ttacgatatttacccacataataatattgaaatataataaataataaaatatt 1766  T

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Target: scaffold0012 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 173272 - 173362
Alignment:
Q  11 catccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaatt 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  173272 catccggacatccactcattgagtccatatcaactaattaaatatttaattaattatccaattagaaatctaatagccttattacttaatt 173362  T

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Target: scaffold0012; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 173415 - 173473
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataat-aaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  173415 attacgatatttgcccacataataatattggaatataataaaataataaaatattccaa 173473  T

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Target: scaffold0064 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14060 - 13960
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  14060 gttaatgggtcatccggacatccactcattgaatccatatcaactaattaaatatttaattaattatccaattacaaatctaatagaattattacttaat 13961  T
Q  101 t 101  Q
    |    
T  13960 t 13960  T

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Target: scaffold0064; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 13907 - 13849
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    ||||| ||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  13907 attactatattttcccacataatgatattggaatataattaaataataaaatattccaa 13849  T

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Target: scaffold0363 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 971 - 1071
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| |||||| ||||||||||||| || |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  971 gttaatgggacatccgaacatccactcattgagcccatatcaactaattaaatattcaattaattatccaattagaaatctaatagccttattacttaat 1070  T
Q  101 t 101  Q
    |    
T  1071 t 1071  T

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Target: scaffold0363; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 1124 - 1181
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataataaataataaaatattccaa 156  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  1124 attacgatattttcccacataatgatattggtatataataaataataaaatattccaa 1181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5756 - 5654
Alignment:
Q  1 gttaatgggccatccggacatccactcat--taagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattactta 98  Q
    ||||||||| |||||| ||||||||||||  | ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||| | |||||||||    
T  5756 gttaatgggtcatccgaacatccactcatattgagtccatatcaactaattaaatatttaattaattatcgaattagaaatctaatagtcatattactta 5657  T
Q  99 att 101  Q
    |||    
T  5656 att 5654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6309 - 6209
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  6309 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 6214  T
Q  97 taatt 101  Q
    |||||    
T  6213 taatt 6209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12182 - 12082
Alignment:
Q  1 gttaatgggccatccggacatccactca--ttaagtccatatcaactaattaaatacttaattaattatcc-aattacaaatctaa-tagccttattact 96  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    ||||||||||||| || || |||||||| |||||||||||||    
T  12182 gttaatgggccatccggacatccactcatgttgagtccatatcaactaattaaa----taattaattatccaaaatagaaatctaattagccttattact 12087  T
Q  97 taatt 101  Q
    |||||    
T  12086 taatt 12082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 6156 - 6098
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatattccaa 156  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  6156 attacgatatttgcccacataatgatattggaatattattaaataataaaatattccaa 6098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 12029 - 11976
Alignment:
Q  99 attacgatatttgtccacataatgatattggaata-taataaataataaaatat 151  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  12029 attacgatatttgcccacataatgatattggaatattattaaataataaaatat 11976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 850 - 750
Alignment:
Q  1 gttaatgggccatccggacatccactcattaagtccatatcaactaattaaatacttaattaattatccaattacaaatctaatagccttattacttaat 100  Q
    ||||||||| ||||  ||||| |||||||| ||| |||||||  |||||||||| ||||| |||||||  |||  |||||||||||||||||||||||||    
T  850 gttaatgggtcatctagacattcactcattgagtacatatcagttaattaaatatttaatcaattatctgattttaaatctaatagccttattacttaat 751  T
Q  101 t 101  Q
    |    
T  750 t 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 697 - 639
Alignment:
Q  99 attacgatatttgtccacataatgatattggaatataa-taaataataaaatattccaa 156  Q
    |||| |||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  697 attatgatattttcccacataatgatattggaatataattaaataataaaatattccaa 639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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