View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11134_low_7 (Length: 454)

Name: NF11134_low_7
Description: NF11134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11134_low_7
NF11134_low_7
[»] chr7 (48 HSPs)
chr7 (18-440)||(34440675-34441096)
chr7 (171-434)||(34450648-34450910)
chr7 (229-434)||(34466724-34466928)
chr7 (27-98)||(35536034-35536105)
chr7 (23-87)||(27121654-27121718)
chr7 (17-93)||(28165023-28165099)
chr7 (28-115)||(9527163-9527250)
chr7 (27-81)||(39591539-39591593)
chr7 (25-110)||(3610810-3610895)
chr7 (25-87)||(1432034-1432099)
chr7 (35-94)||(8960707-8960766)
chr7 (27-114)||(19624137-19624224)
chr7 (27-98)||(45593791-45593862)
chr7 (25-76)||(47046178-47046229)
chr7 (25-144)||(22759065-22759186)
chr7 (24-74)||(43318597-43318647)
chr7 (26-95)||(1417194-1417263)
chr7 (25-86)||(23918896-23918957)
chr7 (29-98)||(24973871-24973940)
chr7 (25-98)||(26935620-26935693)
chr7 (25-98)||(33894550-33894622)
chr7 (16-57)||(40428523-40428564)
chr7 (25-74)||(40689056-40689105)
chr7 (25-86)||(48157190-48157251)
chr7 (35-83)||(43152982-43153030)
chr7 (31-98)||(7244629-7244696)
chr7 (15-74)||(12834997-12835056)
chr7 (36-95)||(21853197-21853256)
chr7 (27-74)||(30456522-30456569)
chr7 (46-116)||(753295-753365)
chr7 (27-85)||(5006581-5006639)
chr7 (20-117)||(22387967-22388066)
chr7 (25-63)||(30180013-30180051)
chr7 (28-74)||(35266850-35266896)
chr7 (25-74)||(2767248-2767297)
chr7 (17-74)||(21453245-21453302)
chr7 (31-84)||(28178910-28178963)
chr7 (28-113)||(28440431-28440516)
chr7 (26-71)||(46825052-46825097)
chr7 (25-86)||(49060479-49060540)
chr7 (18-98)||(991997-992077)
chr7 (46-94)||(2176840-2176888)
chr7 (46-98)||(5373152-5373204)
chr7 (28-92)||(22296301-22296364)
chr7 (25-109)||(27548179-27548263)
chr7 (28-88)||(45813253-45813313)
chr7 (25-116)||(47177544-47177636)
chr7 (25-117)||(47528003-47528095)
[»] chr6 (47 HSPs)
chr6 (27-117)||(8349736-8349826)
chr6 (17-88)||(29274291-29274362)
chr6 (25-151)||(7713899-7714025)
chr6 (35-117)||(6654522-6654605)
chr6 (25-116)||(7351678-7351769)
chr6 (39-129)||(4248854-4248944)
chr6 (28-86)||(24836272-24836330)
chr6 (25-94)||(4006645-4006714)
chr6 (25-94)||(9093626-9093695)
chr6 (25-117)||(5550040-5550132)
chr6 (34-94)||(9559620-9559680)
chr6 (25-113)||(22742278-22742366)
chr6 (36-116)||(32975887-32975967)
chr6 (25-88)||(507157-507220)
chr6 (23-98)||(32386167-32386242)
chr6 (27-98)||(32386635-32386706)
chr6 (20-74)||(1402947-1403001)
chr6 (32-117)||(9732384-9732469)
chr6 (19-72)||(29940749-29940802)
chr6 (27-116)||(33068633-33068722)
chr6 (30-117)||(1497888-1497976)
chr6 (25-117)||(2206498-2206590)
chr6 (29-97)||(11340699-11340767)
chr6 (46-117)||(2514610-2514681)
chr6 (27-98)||(3217262-3217333)
chr6 (31-82)||(10728575-10728626)
chr6 (27-74)||(10749300-10749347)
chr6 (20-95)||(20671930-20672005)
chr6 (19-98)||(21959655-21959734)
chr6 (21-72)||(27595633-27595684)
chr6 (15-58)||(27615333-27615376)
chr6 (15-58)||(27693499-27693542)
chr6 (28-98)||(8420270-8420340)
chr6 (27-117)||(9027485-9027575)
chr6 (28-74)||(30537019-30537065)
chr6 (51-117)||(31668781-31668847)
chr6 (25-66)||(281918-281959)
chr6 (25-98)||(4325378-4325451)
chr6 (25-98)||(10452430-10452503)
chr6 (26-87)||(24476540-24476601)
chr6 (25-66)||(28621180-28621221)
chr6 (25-58)||(31671144-31671177)
chr6 (25-58)||(34611839-34611872)
chr6 (26-98)||(10016472-10016544)
chr6 (36-112)||(24332856-24332931)
chr6 (28-88)||(31624195-31624255)
chr6 (39-87)||(33736776-33736824)
[»] chr2 (47 HSPs)
chr2 (27-101)||(3673731-3673805)
chr2 (25-117)||(11513809-11513898)
chr2 (23-98)||(33267584-33267659)
chr2 (20-106)||(11344349-11344435)
chr2 (25-118)||(11393725-11393818)
chr2 (25-118)||(11410386-11410479)
chr2 (25-93)||(2416245-2416313)
chr2 (18-98)||(18962101-18962181)
chr2 (28-131)||(13630354-13630457)
chr2 (25-104)||(17952771-17952850)
chr2 (25-116)||(28803576-28803667)
chr2 (25-94)||(10143103-10143172)
chr2 (23-116)||(34339032-34339125)
chr2 (23-115)||(44600448-44600543)
chr2 (35-94)||(3611157-3611216)
chr2 (17-64)||(8017395-8017442)
chr2 (27-116)||(5133683-5133770)
chr2 (25-111)||(35755572-35755658)
chr2 (23-68)||(16451082-16451127)
chr2 (27-104)||(37053515-37053592)
chr2 (30-98)||(35809860-35809927)
chr2 (25-93)||(43199346-43199414)
chr2 (25-120)||(1493583-1493678)
chr2 (31-117)||(32098384-32098473)
chr2 (36-83)||(39567845-39567892)
chr2 (29-84)||(40837502-40837557)
chr2 (28-86)||(3423841-3423899)
chr2 (28-118)||(4550684-4550774)
chr2 (25-95)||(28902007-28902077)
chr2 (44-94)||(29629078-29629128)
chr2 (23-116)||(43808485-43808578)
chr2 (21-74)||(656843-656896)
chr2 (36-134)||(3235464-3235563)
chr2 (23-76)||(3458606-3458659)
chr2 (27-88)||(15377702-15377763)
chr2 (25-54)||(18066099-18066128)
chr2 (25-94)||(25609727-25609796)
chr2 (20-57)||(33944573-33944610)
chr2 (29-94)||(34054975-34055040)
chr2 (25-98)||(35459837-35459910)
chr2 (26-71)||(36114594-36114639)
chr2 (60-116)||(2400065-2400121)
chr2 (23-87)||(8820341-8820405)
chr2 (78-114)||(9404511-9404547)
chr2 (17-65)||(9556199-9556247)
chr2 (27-79)||(29288613-29288665)
chr2 (36-88)||(33576675-33576727)
[»] scaffold0024 (3 HSPs)
scaffold0024 (28-117)||(27484-27573)
scaffold0024 (23-87)||(21346-21410)
scaffold0024 (23-56)||(58906-58939)
[»] chr1 (55 HSPs)
chr1 (25-117)||(4363702-4363793)
chr1 (25-115)||(4200139-4200229)
chr1 (23-116)||(27140391-27140487)
chr1 (26-98)||(17269177-17269249)
chr1 (19-115)||(43372023-43372119)
chr1 (25-117)||(49557049-49557141)
chr1 (25-114)||(37841908-37841998)
chr1 (25-83)||(49517012-49517070)
chr1 (25-86)||(15360833-15360894)
chr1 (31-115)||(7274015-7274099)
chr1 (18-98)||(44032062-44032142)
chr1 (18-98)||(52286605-52286685)
chr1 (27-81)||(11211062-11211116)
chr1 (31-76)||(14737781-14737826)
chr1 (25-74)||(15687143-15687192)
chr1 (17-74)||(26630414-26630471)
chr1 (25-74)||(31517810-31517859)
chr1 (28-118)||(47877033-47877119)
chr1 (17-86)||(48830138-48830207)
chr1 (25-65)||(27738250-27738290)
chr1 (25-97)||(46499924-46499996)
chr1 (31-87)||(50319230-50319286)
chr1 (33-88)||(4549803-4549858)
chr1 (31-94)||(6976879-6976942)
chr1 (25-72)||(25006104-25006151)
chr1 (25-88)||(34619448-34619511)
chr1 (27-86)||(36151577-36151636)
chr1 (25-84)||(45990128-45990187)
chr1 (31-98)||(48748659-48748725)
chr1 (24-98)||(870972-871046)
chr1 (23-73)||(1879095-1879145)
chr1 (25-75)||(9656600-9656650)
chr1 (25-111)||(15799618-15799704)
chr1 (29-131)||(23895230-23895332)
chr1 (25-86)||(4256112-4256173)
chr1 (25-74)||(6074425-6074474)
chr1 (23-88)||(7028229-7028294)
chr1 (53-102)||(13037787-13037836)
chr1 (35-76)||(13809947-13809988)
chr1 (25-94)||(23544710-23544779)
chr1 (25-66)||(28467377-28467418)
chr1 (30-87)||(29929696-29929753)
chr1 (25-118)||(30259557-30259650)
chr1 (25-66)||(30371107-30371148)
chr1 (27-72)||(30815707-30815752)
chr1 (60-109)||(33527339-33527388)
chr1 (17-66)||(34179934-34179983)
chr1 (25-94)||(36070181-36070250)
chr1 (32-85)||(40357963-40358016)
chr1 (25-94)||(45999358-45999427)
chr1 (24-65)||(47498905-47498946)
chr1 (17-66)||(49365821-49365870)
chr1 (24-56)||(15784305-15784337)
chr1 (25-65)||(28788608-28788648)
chr1 (27-115)||(45107533-45107620)
[»] scaffold0590 (1 HSPs)
scaffold0590 (26-131)||(1145-1250)
[»] scaffold0275 (1 HSPs)
scaffold0275 (26-131)||(2725-2830)
[»] chr5 (48 HSPs)
chr5 (20-117)||(29588788-29588884)
chr5 (28-144)||(20982208-20982324)
chr5 (27-119)||(37063146-37063238)
chr5 (26-94)||(9202819-9202887)
chr5 (52-116)||(38819672-38819736)
chr5 (25-86)||(29117000-29117061)
chr5 (32-116)||(6738484-6738568)
chr5 (28-72)||(12595813-12595857)
chr5 (25-97)||(35135732-35135804)
chr5 (66-117)||(27104525-27104576)
chr5 (42-117)||(27106010-27106085)
chr5 (35-98)||(40097483-40097546)
chr5 (32-74)||(10363701-10363743)
chr5 (28-86)||(28586839-28586897)
chr5 (25-74)||(14295457-14295506)
chr5 (48-117)||(26516206-26516275)
chr5 (25-110)||(32059659-32059743)
chr5 (29-86)||(38047929-38047986)
chr5 (23-87)||(465892-465956)
chr5 (25-85)||(985573-985633)
chr5 (49-113)||(10391265-10391329)
chr5 (34-98)||(17756808-17756872)
chr5 (36-88)||(33459016-33459068)
chr5 (34-94)||(40048359-40048419)
chr5 (17-52)||(7319379-7319414)
chr5 (20-63)||(8158366-8158409)
chr5 (46-117)||(29115304-29115375)
chr5 (18-117)||(39128547-39128646)
chr5 (34-85)||(42583089-42583140)
chr5 (36-74)||(7853609-7853647)
chr5 (32-74)||(10303752-10303794)
chr5 (25-103)||(36539668-36539746)
chr5 (26-98)||(912719-912792)
chr5 (26-87)||(7674586-7674647)
chr5 (25-58)||(12425538-12425571)
chr5 (25-88)||(26209483-26209545)
chr5 (25-94)||(34112806-34112875)
chr5 (46-87)||(34690812-34690853)
chr5 (29-118)||(35963155-35963244)
chr5 (25-117)||(39823191-39823284)
chr5 (35-92)||(40452224-40452281)
chr5 (27-87)||(4855636-4855696)
chr5 (46-98)||(7096218-7096270)
chr5 (34-66)||(11835236-11835268)
chr5 (25-117)||(14714910-14715001)
chr5 (25-117)||(32172561-32172653)
chr5 (49-97)||(34117627-34117675)
chr5 (46-146)||(39257477-39257577)
[»] chr4 (52 HSPs)
chr4 (25-98)||(30024627-30024700)
chr4 (23-98)||(22684584-22684659)
chr4 (17-116)||(25409795-25409894)
chr4 (25-86)||(26883934-26883995)
chr4 (17-88)||(30338654-30338725)
chr4 (27-145)||(24193465-24193583)
chr4 (26-88)||(29263307-29263369)
chr4 (17-96)||(8130103-8130182)
chr4 (25-117)||(8703690-8703784)
chr4 (25-88)||(27043900-27043963)
chr4 (25-104)||(30207641-30207719)
chr4 (22-85)||(49803151-49803214)
chr4 (25-108)||(54325107-54325190)
chr4 (31-117)||(35727109-35727195)
chr4 (25-75)||(47119035-47119085)
chr4 (33-103)||(47970240-47970310)
chr4 (25-74)||(4071833-4071882)
chr4 (27-84)||(31038939-31038996)
chr4 (25-114)||(44319861-44319949)
chr4 (25-82)||(49219082-49219139)
chr4 (34-117)||(485989-486073)
chr4 (31-98)||(4191666-4191734)
chr4 (32-88)||(24160927-24160983)
chr4 (23-75)||(47800580-47800632)
chr4 (20-88)||(47946135-47946203)
chr4 (32-87)||(5131309-5131364)
chr4 (35-94)||(7601690-7601749)
chr4 (35-74)||(17884019-17884058)
chr4 (31-149)||(25548182-25548298)
chr4 (23-66)||(41701509-41701552)
chr4 (25-117)||(50298438-50298527)
chr4 (35-85)||(3155543-3155593)
chr4 (28-98)||(5219573-5219643)
chr4 (25-87)||(6364087-6364149)
chr4 (28-94)||(11389457-11389523)
chr4 (28-98)||(19422345-19422415)
chr4 (42-96)||(28623218-28623272)
chr4 (28-66)||(42321952-42321990)
chr4 (20-86)||(44119227-44119293)
chr4 (36-118)||(51555948-51556030)
chr4 (25-63)||(51630073-51630111)
chr4 (25-58)||(13949914-13949947)
chr4 (25-98)||(18630607-18630680)
chr4 (25-82)||(54327519-54327576)
chr4 (27-63)||(437504-437540)
chr4 (19-95)||(4663760-4663836)
chr4 (25-116)||(8422909-8422998)
chr4 (28-76)||(11917508-11917556)
chr4 (25-117)||(24443946-24444038)
chr4 (19-107)||(32724037-32724125)
chr4 (26-86)||(44249225-44249285)
chr4 (31-86)||(51044534-51044590)
[»] chr3 (42 HSPs)
chr3 (17-112)||(38462194-38462289)
chr3 (27-76)||(10101548-10101597)
chr3 (27-76)||(10212473-10212522)
chr3 (23-84)||(42809242-42809303)
chr3 (19-98)||(905034-905113)
chr3 (19-74)||(15304411-15304466)
chr3 (31-98)||(44374720-44374787)
chr3 (49-115)||(20173982-20174048)
chr3 (35-117)||(39971227-39971309)
chr3 (23-72)||(42808932-42808981)
chr3 (25-85)||(1395611-1395671)
chr3 (28-104)||(22214754-22214830)
chr3 (25-117)||(41028921-41029013)
chr3 (35-86)||(2128331-2128382)
chr3 (35-98)||(36189493-36189556)
chr3 (33-123)||(3015927-3016016)
chr3 (32-86)||(48364956-48365010)
chr3 (27-76)||(10357382-10357431)
chr3 (25-74)||(49586986-49587035)
chr3 (25-97)||(8007765-8007837)
chr3 (48-116)||(16790181-16790249)
chr3 (27-103)||(33307652-33307728)
chr3 (18-66)||(37689447-37689495)
chr3 (27-98)||(22232753-22232824)
chr3 (36-102)||(24158582-24158649)
chr3 (35-98)||(32095271-32095334)
chr3 (20-115)||(32703048-32703143)
chr3 (35-94)||(35127451-35127510)
chr3 (27-74)||(52618954-52619001)
chr3 (17-55)||(21367824-21367862)
chr3 (25-151)||(21574366-21574491)
chr3 (25-118)||(21862245-21862339)
chr3 (24-98)||(27792799-27792873)
chr3 (28-74)||(36783407-36783453)
chr3 (20-74)||(45433004-45433058)
chr3 (28-93)||(20192679-20192744)
chr3 (29-74)||(26990685-26990730)
chr3 (25-74)||(33405237-33405286)
chr3 (34-115)||(49772747-49772828)
chr3 (17-57)||(37795564-37795604)
chr3 (31-87)||(40122828-40122884)
chr3 (29-117)||(51455852-51455939)
[»] chr8 (40 HSPs)
chr8 (20-118)||(31884501-31884599)
chr8 (25-112)||(37444485-37444573)
chr8 (25-88)||(1112790-1112853)
chr8 (46-117)||(34563158-34563229)
chr8 (27-117)||(29699162-29699252)
chr8 (27-112)||(7026644-7026729)
chr8 (25-66)||(42237492-42237533)
chr8 (29-149)||(4558674-4558794)
chr8 (46-150)||(11119090-11119194)
chr8 (35-98)||(14482129-14482192)
chr8 (15-58)||(35374433-35374476)
chr8 (31-98)||(40280281-40280348)
chr8 (32-87)||(42597339-42597394)
chr8 (28-94)||(26215427-26215493)
chr8 (17-118)||(787168-787269)
chr8 (29-144)||(8536123-8536237)
chr8 (25-94)||(14280471-14280540)
chr8 (35-84)||(32976358-32976407)
chr8 (25-117)||(12972764-12972856)
chr8 (34-94)||(21653012-21653072)
chr8 (19-66)||(8909009-8909056)
chr8 (25-84)||(16210956-16211015)
chr8 (31-74)||(27119984-27120027)
chr8 (15-58)||(29262934-29262977)
chr8 (35-94)||(37152970-37153029)
chr8 (27-66)||(44168517-44168556)
chr8 (25-87)||(3936787-3936849)
chr8 (25-87)||(12361130-12361192)
chr8 (36-98)||(30627983-30628045)
chr8 (46-108)||(40356788-40356850)
chr8 (17-86)||(7646145-7646214)
chr8 (48-97)||(11188248-11188297)
chr8 (35-115)||(26716518-26716596)
chr8 (27-116)||(35453695-35453784)
chr8 (29-98)||(41620365-41620434)
chr8 (25-73)||(3537101-3537149)
chr8 (16-56)||(7878547-7878587)
chr8 (25-117)||(35869745-35869837)
chr8 (28-107)||(41475133-41475213)
chr8 (27-118)||(44617861-44617950)
[»] scaffold0103 (1 HSPs)
scaffold0103 (30-85)||(51508-51563)
[»] scaffold0508 (1 HSPs)
scaffold0508 (27-117)||(9847-9937)
[»] scaffold0100 (1 HSPs)
scaffold0100 (25-118)||(42524-42616)
[»] scaffold0549 (2 HSPs)
scaffold0549 (29-97)||(1798-1866)
scaffold0549 (29-97)||(3888-3956)
[»] scaffold0654 (1 HSPs)
scaffold0654 (31-109)||(6713-6791)
[»] scaffold0221 (1 HSPs)
scaffold0221 (28-94)||(20226-20292)
[»] scaffold0014 (1 HSPs)
scaffold0014 (31-109)||(116632-116710)


Alignment Details
Target: chr7 (Bit Score: 391; Significance: 0; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 18 - 440
Target Start/End: Complemental strand, 34441096 - 34440675
Alignment:
Q  18 agtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  34441096 agtttacagcttatatgcaaacaatttaactttattttatcgtttgttagaggaataacgtatacataagcccttatacgacaagtgttcatgctataag 34440997  T
Q  118 tactaaatgaagtttttaatgcaaacaagacctagttttctcctgtaaattttacatatgtataatataactccttagcaaaacaaattaacagataact 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34440996 tactaaatgaagtttttaatgcaaacaagacctagttttctcctgtaaattttacatatgtataatataactccttagcaaaacaaattaacagataact 34440897  T
Q  218 atagtaaagagtatgtatttgtttacctttatttttaagtgagtgtcattattttgaggatttttgcaaagaatggcagatgcagccagcattccgggat 317  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34440896 atagtaaagagtatgtatttg-ttacctttatttttaagtgagtgtcattattttgaggatttttgcaaagaattgcagatgcagccagcattccgggat 34440798  T
Q  318 caggtgtttgaagttgtgagttgataaaagttgctccatttgactctttaaacagaacctgcgtccaatagctaggagttccatacgattgatcgctgtc 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34440797 caggtgtttgaagttgtgagttgataaaagttgctccatttgactctttaaacagaacctgcgtccaatagctaggagttccatacgattgatcgctgtc 34440698  T
Q  418 aaagacaattgcatctgtgctcc 440  Q
    ||||||||||||||||| |||||    
T  34440697 aaagacaattgcatctgggctcc 34440675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 171 - 434
Target Start/End: Complemental strand, 34450910 - 34450648
Alignment:
Q  171 acatatgtataatataactccttagcaaaacaaattaacagataactatagtaaagagtatgtatttgtttacctttatttttaagtgagtgtcattatt 270  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||| |  |||||    
T  34450910 acatatgtataatataactctttaggacaacaaattaacagataactataataaagagtatgaatttgtt-acctttatttttaagtaagtatttttatt 34450812  T
Q  271 ttgaggatttttgcaaagaatggcagatgcagccagcattccgggatcaggtgtttgaagttgtgagttgataaaagttgctccatttgactctttaaac 370  Q
    |||||||| ||||  |||||| ||||||||||||||  |||||||||| | ||||||||||  |||||||| ||| ||||||||||||||||||||||||    
T  34450811 ttgaggatctttgacaagaattgcagatgcagccagtgttccgggatctgttgtttgaagtgttgagttgagaaatgttgctccatttgactctttaaac 34450712  T
Q  371 agaacctgcgtccaatagctaggagttccatacgattgatcgctgtcaaagacaattgcatctg 434  Q
    |||     |  ||||||||||||||| |||||   ||||| ||||  |||||||||||||||||    
T  34450711 agatatgtcacccaatagctaggagtcccataaacttgattgctgctaaagacaattgcatctg 34450648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 229 - 434
Target Start/End: Complemental strand, 34466928 - 34466724
Alignment:
Q  229 tatgtatttgtttacctttatttttaagtgagtgtcattattttgaggatttttgcaaagaatggcagatgcagccagcattccgggatcaggtgtttga 328  Q
    |||||||||||| ||||||||||| |||| |||   ||||||||||||| ||| ||||||||| |||||||||  |||    || |||||||||||||||    
T  34466928 tatgtatttgtt-acctttattttcaagtaagtactattattttgaggactttggcaaagaattgcagatgcaatcagtgagccaggatcaggtgtttga 34466830  T
Q  329 agttgtgagttgataaaagttgctccatttgactctttaaacagaacctgcgtccaatagctaggagttccatacgattgatcgctgtcaaagacaattg 428  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| |     |  ||||||||||||||| ||||| | ||||| ||||| ||| |||||||    
T  34466829 agttgtgagttgagaaatgttgctccatttgactctttaaacatatatgtcacccaatagctaggagtcccataagcttgatagctgttaaaaacaattg 34466730  T
Q  429 catctg 434  Q
    ||||||    
T  34466729 catctg 34466724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 35536105 - 35536034
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||||||| ||||||||||||| | ||||| ||||||| | |||||||||||| ||||||||    
T  35536105 cttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatga 35536034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 27121654 - 27121718
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||| ||||||| | ||||||||||    
T  27121654 acagcttatatgaaaacaatttgactttattttatcatttattatagaaatatcttatacataag 27121718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 28165099 - 28165023
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 93  Q
    ||||||| ||||||||| |||||||||| |||| |||||||| ||||||| ||||| ||| ||||||||||| ||||    
T  28165099 cagtttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 9527163 - 9527250
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 115  Q
    ||||||||||||| ||| |||||||| |||| ||||||| ||| ||| |||||| |||||| ||| ||||| |||||||||| |||||    
T  9527163 ttatatgaaaacagtttgactttattatatcttttgttatagatatagcgtatatataagcacttgtatgataagtgtttatactata 9527250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 39591539 - 39591593
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtata 81  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||    
T  39591539 cttatatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 3610810 - 3610895
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatg 110  Q
    ||||||||  |||||| |||  ||| |||||||| ||||||  ||||||| | ||||||||||| |||||||||||||||||||||    
T  3610810 agcttataccaaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataagcacttatatgacaagtgtttatg 3610895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 1432034 - 1432099
Alignment:
Q  25 agcttatatgaaaacaatttaacttt---attttatcgtttgttagagaaataacgtatacataag 87  Q
    |||||||||||||| |||||||||||   |||||||| ||||||| ||||||||| ||||||||||    
T  1432034 agcttatatgaaaataatttaacttttttattttatcttttgttatagaaataacttatacataag 1432099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 8960707 - 8960766
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||||||||||||||||||| |||| || || |||| | |||||||||||||||||    
T  8960707 aaaacaatttaactttattttatcatttgctataggaatagcatatacataagcccttat 8960766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 19624224 - 19624137
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctat 114  Q
    |||||||||||| | ||| ||||||||||  | | | ||| ||||||| | |||| |||||||||||||||| |||||||||||||||    
T  19624224 cttatatgaaaatagttttactttattttgccttatcttatagaaatatcttatatataagcccttatatgataagtgtttatgctat 19624137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 45593791 - 45593862
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||| ||| ||||||||||||  ||||||| ||||||| | |||||||||||  ||||||||    
T  45593791 cttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttatatga 45593862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 47046178 - 47046229
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 76  Q
    |||||||||||||||||||| ||||||||||||| ||||||  |||||||||    
T  47046178 agcttatatgaaaacaatttgactttattttatcctttgttgtagaaataac 47046229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 22759186 - 22759065
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg--acaagtgtttatgctataagtacta 122  Q
    ||||||||||||||||||||  |||||||||||| ||||||| | ||||| | || |||||| | ||||||||  | || ||||||| |||||||| ||     
T  22759186 agcttatatgaaaacaattttcctttattttatcttttgttatacaaatagcttaaacataaacgcttatatgataaaaatgtttatactataagtgctt 22759087  T
Q  123 aatgaagtttttaatgcaaaca 144  Q
    ||| ||||| || || ||||||    
T  22759086 aattaagttgtttatccaaaca 22759065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 43318597 - 43318647
Alignment:
Q  24 cagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||| |||||||| ||||||||||||| ||||||| |||||||    
T  43318597 cagcttatatgataacaatttgactttattttatcatttgttatagaaata 43318647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 1417263 - 1417194
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 95  Q
    ||||||||||||||||||| ||||||||||||| ||||||| | |||||   ||||||||| ||| ||||    
T  1417263 gcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataaacccgtata 1417194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 23918957 - 23918896
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    |||||||||||||||||||| ||||||||||||| ||||| | ||| ||||| || ||||||    
T  23918957 agcttatatgaaaacaatttgactttattttatcttttgtaatagagataacttacacataa 23918896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 24973940 - 24973871
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||| ||||||||| | ||||||||||| ||||||| ||||||| | | ||||||||| |||||||||    
T  24973940 tatatggaaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatga 24973871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 26935620 - 26935693
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||| |||||||||||||||||| |||||||||| ||||||| | ||||| | || ||| |||| |||||||||    
T  26935620 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatga 26935693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 33894622 - 33894550
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||||| ||| |||| |||||||| ||||||| ||||||| | ||||||||||| |||| ||||    
T  33894622 agcttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcacttacatga 33894550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 40428564 - 40428523
Alignment:
Q  16 tcagtttacagcttatatgaaaacaatttaactttattttat 57  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  40428564 tcagtttatagcttatatgaaaataatttaactttattttat 40428523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 40689056 - 40689105
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||||| ||||||||||||||||||| |||| || |||||||    
T  40689056 agcttatatgaaaataatttaactttattttatcttttgctatagaaata 40689105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 48157190 - 48157251
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||||| |||||||||| ||||||||||||| ||| ||| ||||||||  |||||||||    
T  48157190 agcttatattaaaacaatttcactttattttatcttttattatagaaataagttatacataa 48157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 43152982 - 43153030
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtataca 83  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||||||    
T  43152982 aaaacaatttaactttattttatcttttgttatagaaatagcttataca 43153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 7244696 - 7244629
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||| ||| ||||| ||||||| |||| || ||||||| | ||||||||||| |||||||||    
T  7244696 tatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatga 7244629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 12834997 - 12835056
Alignment:
Q  15 atcagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||| ||| |||| ||||||||||||||| ||||||||||||| ||||||  |||||||    
T  12834997 atcagcttatagctaatatgaaaacaatttgactttattttatcttttgttgtagaaata 12835056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 21853197 - 21853256
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 95  Q
    ||||||||||||||||||||||| ||||| | ||||||||| |||| |||| | ||||||    
T  21853197 aaacaatttaactttattttatcttttgtaatagaaataacttatatataatcacttata 21853256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 30456522 - 30456569
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||||||||| ||||||||||||| ||||||  |||||||    
T  30456522 cttatatgaaaacaatttgactttattttatcttttgttttagaaata 30456569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 753295 - 753365
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||||| ||  ||||||| |||||||  ||||||| |||| ||||||||| || ||||||||||||||    
T  753295 actttatttcatattttgttatagaaatagtgtatacacaagcgcttatatgataaatgtttatgctataa 753365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 5006581 - 5006639
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 85  Q
    |||||||||||||| ||| ||||||||||||| ||||||| || |||| | ||||||||    
T  5006581 cttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 22387967 - 22388066
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttat---tttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    |||| ||||||| |||||| ||||| |||||||   |||||| ||||||| ||||||| | ||| ||||||| |||| |||| ||||||||||| |||||    
T  22387967 tttatagcttat-tgaaaagaatttgactttatacttttatcttttgttatagaaatagcttatccataagcacttaaatgataagtgtttatgttataa 22388065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 30180051 - 30180013
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttg 63  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  30180051 agcttatacgaaaacaatttaactttattttatcttttg 30180013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 35266896 - 35266850
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||||||| ||||||||||||||| ||| ||||||| |||||||    
T  35266896 ttatatgaaaaaaatttaactttatttaatcatttgttatagaaata 35266850  T

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Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 2767248 - 2767297
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||| |||||||||||||  ||||||||||| ||||||| |||||||    
T  2767248 agcttatgtgaaaacaatttatatttattttatcttttgttatagaaata 2767297  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 21453302 - 21453245
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||| ||||||||||| ||||| || ||||||| ||||| ||||||| |||||||    
T  21453302 cagtttatagcttatatgagaacaacttgactttatcttatcttttgttacagaaata 21453245  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 28178963 - 28178910
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 84  Q
    |||||||||||| | ||||||||||||| ||||||| ||||||| | |||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 28440516 - 28440431
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgcta 113  Q
    ||||| |||||| |||| ||||||||||||| |||||||  |||||| | ||| | ||| | |||||||||  |||||||||||||    
T  28440516 ttatacgaaaaccatttgactttattttatcttttgttactgaaatagcttattcttaatcgcttatatgattagtgtttatgcta 28440431  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 46825097 - 46825052
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaa 71  Q
    ||||||||||||||||||| ||||||||||||| ||| ||| ||||    
T  46825097 gcttatatgaaaacaatttgactttattttatctttttttatagaa 46825052  T

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Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 49060540 - 49060479
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||||| |||| ||||| ||||||||||||  ||||||| ||||||| | |||||||||    
T  49060540 agcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataa 49060479  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 992077 - 991997
Alignment:
Q  18 agtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||| | |||||||||||| | |||  |||||||||||  ||||||| ||||| ||| ||||| ||||| |||||||||    
T  992077 agtttataccttatatgaaaatattttgtctttattttattttttgttatagaaacaacttatacgtaagcacttatatga 991997  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 2176888 - 2176840
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||||||| |||||||  ||||||  ||||||||||||||||||    
T  2176888 actttattttatcttttgttactgaaatagtgtatacataagcccttat 2176840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 5373204 - 5373152
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||||| ||||||| ||||||| | ||||||||||| |||| ||||    
T  5373204 actttattttatcttttgttatagaaatagcatatacataagcacttacatga 5373152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 22296301 - 22296364
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctt 92  Q
    ||||| ||||| ||||||||||||||||||| || | || |||||||||  ||||||||||||||    
T  22296301 ttataggaaaataatttaactttattttatc-ttcgctatagaaataacaaatacataagccctt 22296364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 27548263 - 27548179
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttat 109  Q
    |||||| ||||||||||||  ||||||||||||| |||| ||  |||||| | |||| |||||| |||||| || || |||||||    
T  27548263 agcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagcttatagataagcacttataagataaatgtttat 27548179  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 45813253 - 45813313
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    |||||||||||||| || ||||||||||||| |||| || ||||||| | |||| ||||||    
T  45813253 ttatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataagc 45813313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 47177636 - 47177544
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaagtgtttatgctataa 116  Q
    |||||||||||||||||||||||||| |||| |  |||| || ||||||| | |||||| |||  ||||| || | ||||| |||||||||||    
T  47177636 agcttatatgaaaacaatttaactttgttttgtattttgatatagaaataccttatacagaagggcttatcatcataagtgcttatgctataa 47177544  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 47528003 - 47528095
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||| | |||||| || || ||||||||||| ||  ||| ||||||| | ||||||||| | ||| ||| | ||||||||||||||||||    
T  47528003 agcttatgtaaaaacagttgaattttattttatccttaattatagaaatagcttatacataaacacttgtataataagtgtttatgctataag 47528095  T

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Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 8349736 - 8349826
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||   |||||| || | ||||||||| ||||| ||||||||||||    
T  8349736 cttatataaaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataagtggttatgctataag 8349826  T

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Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 29274291 - 29274362
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||| || ||||||| | |||||||||||    
T  29274291 cagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagc 29274362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 7714025 - 7713899
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaa 124  Q
    |||||||||||||||||||| ||||||||||||| |||||||   || ||   ||||||||||| ||||||||| | ||| |||||||||||| ||  ||    
T  7714025 agcttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgataggtggttatgctataagcacgtaa 7713926  T
Q  125 tgaagtttttaatgcaaacaagaccta 151  Q
    | ||||| || || |||||||| ||||    
T  7713925 ttaagttctttatccaaacaaggccta 7713899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 6654605 - 6654522
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata-tgacaagtgtttatgctataag 117  Q
    |||||||||| |||| |||||||  ||||||| ||||||||| |||||||||||||||||| ||| ||| ||| ||||||||||    
T  6654605 aaaacaatttgacttaattttattatttgttatagaaataacttatacataagcccttatattgataagcgttaatgctataag 6654522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 7351678 - 7351769
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    |||||||||||||||| |||||||||||||||| |||| ||| | |||||   |||||||||||  |||||||| ||| | |||||||||||    
T  7351678 agcttatatgaaaacagtttaactttattttatagtttattatataaatagtttatacataagcatttatatgataagagcttatgctataa 7351769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 4248944 - 4248854
Alignment:
Q  39 caatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaag 129  Q
    |||||| ||||||||||||| |||||||  |||||| | |||| |||||| ||||||||||||| | |||||||| |||| || |||||||    
T  4248944 caatttgactttattttatcttttgttattgaaatagcttatatataagcacttatatgacaagcgcttatgctagaagtgctcaatgaag 4248854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 24836272 - 24836330
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||| ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||    
T  24836272 ttatacgaaaacaatttgactttattttatcttttgttatagaaataacttatacataa 24836330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 4006714 - 4006645
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||| |||||||||| ||||||||||||| ||||||| ||||||| | ||| ||||||| |||||    
T  4006714 agcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 9093626 - 9093695
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||| ||||||||||||||||||||||||| |||| || ||||||| | ||| ||||||| |||||    
T  9093626 agcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataagcgcttat 9093695  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 5550132 - 5550040
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||||||||||||||||| ||||||| |||||  || |||  ||||||   ||||||||||| |||||||||| || | ||||||||||||    
T  5550132 agcttatatgaaaacaatttgactttatgttatctcttattatcgaaatactatatacataagcacttatatgaccagcgcttatgctataag 5550040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 9559620 - 9559680
Alignment:
Q  34 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||||||| ||||||||||| |||| || ||||||||| ||||||||||| |||||    
T  9559620 gaaaacaatttaaatttattttatcttttgctatagaaataacttatacataagcgcttat 9559680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 22742366 - 22742278
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgcta 113  Q
    |||||||||||||||||||| ||||||||||||| ||||||| | ||||| | |||| |||||  |||||| || ||| | ||||||||    
T  22742366 agcttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgcttatgcta 22742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 32975967 - 32975887
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||| ||| ||||||||||||  ||||||| ||||||||| ||||||||| | ||||||||| ||| | |||||||||||    
T  32975967 aaacagtttgactttattttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataa 32975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 507220 - 507157
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||||||  |||||||| ||||||||||||||| ||||||| ||||||||  |||||||||||    
T  507220 agcttatacaaaaacaatctaactttattttatcttttgttatagaaataatttatacataagc 507157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 32386167 - 32386242
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||| |||||| ||| ||||||||||||| ||| | || |||||| | ||||||||||| |||||||||    
T  32386167 acagcttatataaaaacagttttactttattttatcttttctaagtgaaatagcttatacataagcacttatatga 32386242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 32386635 - 32386706
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||||||| || |||||||||| ||| |||| ||||||   ||||||||||| |||||||||    
T  32386635 cttatatgaaaacaatttgaccttattttatcttttcttagtgaaatagtctatacataagcacttatatga 32386706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 1403001 - 1402947
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||| |||||||||||||| | ||||||||||||||||| ||||||| |||||||    
T  1403001 tttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaata 1402947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 9732469 - 9732384
Alignment:
Q  32 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||||| |||| |||||||| |||  || ||||||| | ||| ||||||| ||||||||  || |||||||||||||||    
T  9732469 atgaaaacaatttgacttaattttatcctttaatatagaaatagcttatgcataagcacttatatggtaaatgtttatgctataag 9732384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 29940802 - 29940749
Alignment:
Q  19 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 72  Q
    |||||||||||| |||||||||| || ||||||||||||| ||||||| |||||    
T  29940802 gtttacagcttaaatgaaaacaaattgactttattttatcttttgttatagaaa 29940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 33068633 - 33068722
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||| |||||||| ||| |  |||||||||| ||||||| ||||||||| |||||||||||  |||| ||| ||| | |||||||||||    
T  33068633 cttatttgaaaacagtttgatattattttatcttttgttatagaaataacttatacataagcatttatttgataagcgcttatgctataa 33068722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 1497976 - 1497888
Alignment:
Q  30 atatgaaaacaatttaactttattttatcgtttg-ttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||| ||| ||||||||||| | |||| ||| | ||||| | || |||||||| |||| |||| ||||||||||||||||||    
T  1497976 atatgaaaacagtttgactttattttaccttttggttaaaaaaatagcttaaacataagcacttaaatgataagtgtttatgctataag 1497888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 2206590 - 2206498
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||| |||||||||  ||||||||||||| ||||||| | ||||||| |||||| ||   |||||| || ||| | ||||||||||||    
T  2206590 agcttatataaaaacaattatactttattttatcttttgttataaaaataacttatacagaaatgcttatacgataagagcttatgctataag 2206498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 11340699 - 11340767
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 97  Q
    |||||||||| || |||||||||||||||| ||||||| |||| || | |||| |||||| ||||||||    
T  11340699 tatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttatatg 11340767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 2514681 - 2514610
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||||| ||| ||| ||||||| | ||||||||||| |||| |||| |||  |||||||||||||    
T  2514681 actttattttatcttttattatagaaatagcttatacataagcacttacatgataagcatttatgctataag 2514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 3217262 - 3217333
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||| ||||| ||||||||||||| | | ||| | ||||| | ||||||||||| |||||||||    
T  3217262 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatatga 3217333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 10728626 - 10728575
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatac 82  Q
    |||||||||||||||||||||||||||| |||| |  ||||||||| |||||    
T  10728626 tatgaaaacaatttaactttattttatcttttgctttagaaataacttatac 10728575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 10749300 - 10749347
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||| ||||||||||||||||||| ||| ||| |||||||    
T  10749300 cttatatgaaaataatttaactttattttatcttttattatagaaata 10749347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 20671930 - 20672005
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 95  Q
    |||| |||||||| ||||||||||| ||||||||||||| |||| |  ||||||| | ||||||||| | ||||||    
T  20671930 tttaaagcttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcacttata 20672005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 21959734 - 21959655
Alignment:
Q  19 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||| |||||||||| |||||| || ||||||||||||| |||||||  |||||| | ||||| ||||| ||| |||||    
T  21959734 gtttatagcttatatgcaaacaaattgactttattttatcttttgttatggaaatagcttatacttaagcacttctatga 21959655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 27595633 - 27595684
Alignment:
Q  21 ttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 72  Q
    |||||||||||||||||| ||||| ||||||||||||| ||| ||| |||||    
T  27595633 ttacagcttatatgaaaataatttgactttattttatcttttattatagaaa 27595684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 27615333 - 27615376
Alignment:
Q  15 atcagtttacagcttatatgaaaacaatttaactttattttatc 58  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||    
T  27615333 atcagcttacagcttatatgaaaagaatttgactttattttatc 27615376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 27693499 - 27693542
Alignment:
Q  15 atcagtttacagcttatatgaaaacaatttaactttattttatc 58  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||    
T  27693499 atcagcttacagcttatatgaaaataatttgactttattttatc 27693542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 8420270 - 8420340
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||| || ||| ||| ||||||||||||| ||| ||| ||||||||| | ||||||||| |||||||||    
T  8420270 ttatataaacacagtttgactttattttatcatttattaaagaaataacttgtacataagcacttatatga 8420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 9027575 - 9027485
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||| |||||| ||| ||||||||||||| | | ||  ||||||| | |||| |||||| ||||||| | ||||||| ||||||||||    
T  9027575 cttatattaaaacagtttgactttattttatcttctattgtagaaatagcttatagataagcacttatataataagtgttcatgctataag 9027485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 30537019 - 30537065
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||||| |||| ||||||||||| ||||||| |||||||    
T  30537019 ttatatgaaaacaaattaattttattttatcttttgttatagaaata 30537065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 31668781 - 31668847
Alignment:
Q  51 attttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||||  ||||||| ||||||| | ||||||||||| ||||||||| || || ||||||||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataagcacttatatgataattgcttatgctataag 31668847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 281918 - 281959
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    ||||||||||||||||| || ||||||||||||| |||||||    
T  281918 agcttatatgaaaacaagttgactttattttatcttttgtta 281959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 4325378 - 4325451
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||| | |||  || ||||||||| ||| ||| ||||||||| || |||||||| |||||||||    
T  4325378 agcttatatgaaaatagtttgtctctattttatcatttattatagaaataacttagacataagcacttatatga 4325451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 10452430 - 10452503
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||| | ||| | ||||||||||  ||||||| ||||||| | ||||||||||| || ||||||    
T  10452430 agcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcactgatatga 10452503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 24476601 - 24476540
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||||||||| |||||||||  |||||||| |||| || ||||||| | ||||||||||    
T  24476601 gcttatatgaaaataatttaactacattttatcttttgctatagaaatagcttatacataag 24476540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 28621180 - 28621221
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    ||||||||  |||||||||||||||||||||||| |||||||    
T  28621180 agcttatacaaaaacaatttaactttattttatcttttgtta 28621221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 31671144 - 31671177
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatc 58  Q
    |||||||||||||||||||||||||| |||||||    
T  31671144 agcttatatgaaaacaatttaactttgttttatc 31671177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 34611872 - 34611839
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatc 58  Q
    |||||||| |||||||||||||||||||||||||    
T  34611872 agcttataagaaaacaatttaactttattttatc 34611839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 10016544 - 10016472
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||| |||| ||||| ||||||||||| |||| |  ||||||| | ||||||||||  |||||||||    
T  10016544 gcttatatgagaacagtttaaatttattttatcttttggtttagaaatagcttatacataaggacttatatga 10016472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 24332931 - 24332856
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgct 112  Q
    |||||| |||||||||||||||| ||| ||| ||||||| | ||||||||| | |||||| || ||||| |||||||    
T  24332931 aaacaaattaactttattttatc-ttttttaaagaaatagcttatacataatcacttataggataagtgcttatgct 24332856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 31624255 - 31624195
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||| |||||||||||||  |||||||||| ||||||| ||||||| | |||||| ||||    
T  31624255 ttatacgaaaacaatttaaacttattttatcttttgttatagaaatagcttatacacaagc 31624195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 33736824 - 33736776
Alignment:
Q  39 caatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    |||||||||||||||||||  | ||||| ||||||||| ||||||||||    
T  33736824 caatttaactttattttatgttatgttatagaaataacttatacataag 33736776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 3673805 - 3673731
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaa 101  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||  |||||||||| ||||||||||||    
T  3673805 cttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatatgacaa 3673731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 11513898 - 11513809
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||||||||||||||||| ||||||||||||| ||||||   | |||||| ||||||||| ||||||||||| ||||| ||||| ||||||    
T  11513898 agcttatatgaaaacaatttgactttattttatcttttgtt---gtaataacttatacataaacccttatatgataagtgcttatgttataag 11513809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 33267584 - 33267659
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||||||| |||||||||||||||  |||||||| |||||||   ||||||||||| |||||||||    
T  33267584 acagcttatatgaaaacagtttaactttattttactgtttgttatagaaatagattatacataagcacttatatga 33267659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 11344349 - 11344435
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtt 106  Q
    |||| ||||| |||||||||||||| ||||| ||||||| ||||||| ||||||| | ||| ||||||| ||||||| |||||||||    
T  11344349 tttatagcttgtatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcacttatataacaagtgtt 11344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 11393725 - 11393818
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    |||||||||||| || ||||| ||||||| |||| |||| || ||||||| | ||||||||||| |||| |||| || ||||||||||||||||    
T  11393725 agcttatatgaagacgatttagctttattgtatcttttggtatagaaatagcttatacataagcacttaaatgataaatgtttatgctataagt 11393818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 11410386 - 11410479
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    |||||||||||| || ||||| ||||||| |||| |||| || ||||||| | ||||||||||| |||| |||| || ||||||||||||||||    
T  11410386 agcttatatgaagacgatttagctttattgtatcttttggtatagaaatagcttatacataagcacttaaatgataaatgtttatgctataagt 11410479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 2416313 - 2416245
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 93  Q
    ||||||||| ||||||||||||||| |||||||| |||| || ||||||||| ||||||||||| ||||    
T  2416313 agcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataagcactta 2416245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 18962101 - 18962181
Alignment:
Q  18 agtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||| |||||||||||||||| ||||||||||||||||| ||||||| | ||||| |  |||||||||| |||| ||||    
T  18962101 agtttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcacttacatga 18962181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 13630354 - 13630457
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatga 127  Q
    ||||||||||||| ||| ||||||| ||||| |||| |||||||||||| ||||||||||| | ||||||| || ||| || | |||||| ||| ||| |    
T  13630354 ttatatgaaaacagtttgactttatcttatcttttgatagagaaataacttatacataagcacctatatgaaaaatgtgtacgttataagcacttaatta 13630453  T
Q  128 agtt 131  Q
    ||||    
T  13630454 agtt 13630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 17952771 - 17952850
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtg 104  Q
    |||||||||||||| | ||| ||||||||||||| ||||||| ||||||| | |||| |||||| ||||||||| |||||    
T  17952771 agcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataagtg 17952850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 28803576 - 28803667
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||||||||| || ||| ||||||||||||| |||||||  |||||||| |||| |||||| ||||||||| |||  ||||||| ||||    
T  28803576 agcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataagcatttatgccataa 28803667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 10143172 - 10143103
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||| |||||| ||| |||| |||||||| ||||||| ||||||||| ||||||||||| |||||    
T  10143172 agcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 34339125 - 34339032
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    |||||||||| ||||||| | | ||||||||||||| || | || ||||| |   ||||||||||| ||||||||| |||||||||||||||||    
T  34339125 acagcttatacgaaaacagtctgactttattttatctttagctatagaaaaagtttatacataagcacttatatgataagtgtttatgctataa 34339032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 44600543 - 44600448
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgttt--gttagagaaataacgtatacataagcccttat-atgacaagtgtttatgctata 115  Q
    ||||||||||||||||| |||||||||||||||||| |||  | || ||||||| | ||||||||||| ||||| | || |||||| |||||||||    
T  44600543 acagcttatatgaaaactatttaactttattttatctttttggctatagaaatagcttatacataagcacttatcacgataagtgtctatgctata 44600448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 3611216 - 3611157
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||||||||||||||||| | |||| || ||||||||| ||||||||||| |||||    
T  3611216 aaaacaatttaactttattttaccttttgctatagaaataacttatacataagcacttat 3611157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 8017442 - 8017395
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgt 64  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  8017442 cagtttacagcttatatgaaaataatttaactttgttttatcctttgt 8017395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 5133770 - 5133683
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||| |||||| |||| |||||||||||| ||||||| ||||||| | ||||||||||  |  |||||| ||||| |||||||||||    
T  5133770 cttatataaaaacagtttatctttattttatcttttgttatagaaatagcttatacataag--caaatatgataagtgcttatgctataa 5133683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 35755572 - 35755658
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgc 111  Q
    |||||| ||||||||||||| |||||||||| |  ||  ||| ||||||| | ||||||||| | |||||| |||||||||||||||    
T  35755572 agcttacatgaaaacaatttgactttattttctatttgattatagaaatagcttatacataaacacttatacgacaagtgtttatgc 35755658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 16451127 - 16451082
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttaga 68  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||    
T  16451127 acagcttatatgaaaacaatttaacttcattttatcttttgctaga 16451082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 37053592 - 37053515
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtg 104  Q
    |||||||||||||| ||| ||||||||||||  | ||||| |||||||   ||||||||||| ||||||||| |||||    
T  37053592 cttatatgaaaacagtttgactttattttattttctgttatagaaatagtctatacataagcacttatatgataagtg 37053515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 35809927 - 35809860
Alignment:
Q  30 atatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||||||| | ||||||||||| ||||| |  |||||||| ||||||||||| |||||||||    
T  35809927 atatgaaaacaatttgattttattttatc-tttgtcatggaaataacttatacataagcacttatatga 35809860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 43199414 - 43199346
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 93  Q
    |||||||| ||| | ||||||||||||||||||| ||||||  ||||||||| |||||| |||| ||||    
T  43199414 agcttatacgaagataatttaactttattttatcttttgttgtagaaataacttatacagaagcgctta 43199346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 1493583 - 1493678
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtac 120  Q
    ||||||||||||||||| |  |||||||||||||  |||||| ||||| |   |||| ||||||  |||||||| ||| |||||||| ||||||||    
T  1493583 agcttatatgaaaacaactagactttattttatctattgttatagaaagagtttataaataagcaattatatgataagagtttatgcgataagtac 1493678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 32098384 - 32098473
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct---tatatgacaagtgtttatgctataag 117  Q
    |||||||||| ||| ||||||||||||| ||||||| ||||||| | |||| ||||||  |   ||||||| || |||||||||||||||    
T  32098384 tatgaaaacactttgactttattttatcttttgttatagaaatagcttatatataagcatttagtatatgataactgtttatgctataag 32098473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 39567892 - 39567845
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaataacgtataca 83  Q
    ||||||||||||||||||||||| ||||||| ||||||| | ||||||    
T  39567892 aaacaatttaactttattttatcttttgttatagaaatatcttataca 39567845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 40837502 - 40837557
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 84  Q
    |||||||||||||||| |||||| |||||| ||||||| ||||||| | |||||||    
T  40837502 tatatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 3423841 - 3423899
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||||||| ||||| ||||||||||||| |||| || | ||||||| |||||||||    
T  3423841 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 3423899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 4550774 - 4550684
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    |||||||||||||  || || |||||||||| ||| |||  |||| ||| ||||||||||| ||||| ||| ||| | |||||||||||||    
T  4550774 ttatatgaaaacagcttgacgttattttatcttttattatggaaacaacttatacataagcacttatgtgataagagattatgctataagt 4550684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 28902077 - 28902007
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 95  Q
    |||||||||||||||| ||||| ||||||||| | | ||||| | ||||| | ||||||||||| ||||||    
T  28902077 agcttatatgaaaacagtttaattttattttaacttatgttataaaaatagcttatacataagcacttata 28902007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 29629078 - 29629128
Alignment:
Q  44 taactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||||||||| ||||| | ||||||||| ||||||||||| |||||    
T  29629078 taactttattttatcttttgtcacagaaataacatatacataagcacttat 29629128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 43808578 - 43808485
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgtta-gagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    |||||||||||||||| | |||||||||||||||| ||||||||  | ||||| | ||||||||| | ||||||||| | | | |||||||||||    
T  43808578 acagcttatatgaaaatagtttaactttattttat-gtttgttataaaaaatagcttatacataaacacttatatgatacgcgcttatgctataa 43808485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 656843 - 656896
Alignment:
Q  21 ttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||| ||||||||||| | | ||||||||| ||||||| |||||||    
T  656843 ttacagcttatacgaaaacaatttgattatattttatcttttgttatagaaata 656896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 3235464 - 3235563
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat--gacaagtgtttatgctataagtactaaatgaagtttt 133  Q
    ||||| ||| |||||||||| || ||||||| | ||||| |  |||||||||| |||||||  || ||||||||||||||||||| || ||| |||||||    
T  3235464 aaacagtttgactttatttt-tcatttgttataaaaatagctaatacataagcacttatatatgataagtgtttatgctataagtgctcaattaagtttt 3235562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 3458659 - 3458606
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 76  Q
    |||||||||||||||| | ||| ||||||||||||| ||||||| | |||||||    
T  3458659 acagcttatatgaaaaaagtttgactttattttatcttttgttataaaaataac 3458606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 15377763 - 15377702
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    |||||||||||||||| ||||||||||||||| |||| || |||| || | |||| ||||||    
T  15377763 cttatatgaaaacaatctaactttattttatcctttggtatagaagtagcttataaataagc 15377702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 54
Target Start/End: Complemental strand, 18066128 - 18066099
Alignment:
Q  25 agcttatatgaaaacaatttaactttattt 54  Q
    ||||||||||||||||||||||||||||||    
T  18066128 agcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 25609796 - 25609727
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||| ||||| || || ||||||||||||| ||| ||| ||||||| | ||||||||||| |||||    
T  25609796 agcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcacttat 25609727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 33944610 - 33944573
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttat 57  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  33944610 tttatagcttatatgaaaacaatttgactttattttat 33944573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 34054975 - 34055040
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||| ||||| |||  |||||||||||| ||||||| ||||||| | ||||||||||| |||||    
T  34054975 tatatgtaaacagtttgcctttattttatcttttgttatagaaatagcctatacataagcacttat 34055040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 35459910 - 35459837
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||| ||||||||||| ||||||||||||| |||| || | ||||| | |||||| || | |||||||||    
T  35459910 agcttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatga 35459837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 36114594 - 36114639
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaa 71  Q
    |||||||  |||||||||||||||||||||||| ||||||| ||||    
T  36114594 gcttatacaaaaacaatttaactttattttatcttttgttatagaa 36114639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 2400121 - 2400065
Alignment:
Q  60 tttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||| ||||| ||| ||||||||||| ||||||||| || ||||||||| ||||    
T  2400121 tttgttatagaaacaacttatacataagcacttatatgataattgtttatgccataa 2400065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 8820341 - 8820405
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||||||| ||||| ||| |||| ||||||||| ||||||| | ||||| | ||||||||||    
T  8820341 acagcttatattaaaacgattgaactatattttatcttttgttatataaatagcttatacataag 8820405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 9404547 - 9404511
Alignment:
Q  78 tatacataagcccttatatgacaagtgtttatgctat 114  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9404547 tatacataagcacttatatgataagtgtttatgctat 9404511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 9556247 - 9556199
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgtt 65  Q
    ||||||| ||||| ||||||||||  || ||||||||||||||||||||    
T  9556247 cagtttatagcttgtatgaaaacacgttgactttattttatcgtttgtt 9556199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 29288665 - 29288613
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgta 79  Q
    ||||||||||||||||| | |||||||||||| ||||||  ||||||| ||||    
T  29288665 cttatatgaaaacaattcacctttattttatcttttgttgtagaaatagcgta 29288613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 33576675 - 33576727
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||| ||| |||||||| |||| ||||||| ||||||||| |||||||||||    
T  33576675 aaacagtttgactttattgtatcttttgttatagaaataacctatacataagc 33576727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 27573 - 27484
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||||||||| ||||||||||||| | ||||| ||||||||| ||||||||||| |||| |||| ||| | ||||||||||||    
T  27573 ttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataag 27484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 21346 - 21410
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    |||||||||| ||||||||||||||||||||||||| |||  || | ||||| | ||||||||||    
T  21346 acagcttatacgaaaacaatttaactttattttatcttttcctataaaaatagcttatacataag 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 58939 - 58906
Alignment:
Q  23 acagcttatatgaaaacaatttaactttatttta 56  Q
    |||||||||| |||||||||||||||||||||||    
T  58939 acagcttatacgaaaacaatttaactttatttta 58906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 4363702 - 4363793
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||||||||||||| ||| || |||||| ||| ||||||| | |||||  |||||||||||| ||||||||||||||||||||||||||||    
T  4363702 agcttatatgaaaacagtttgacattatttaatcttttgttata-aaatagagtatacataagcacttatatgacaagtgtttatgctataag 4363793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 4200229 - 4200139
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 115  Q
    ||||||||||||||||| || ||||||||||||| ||||||| | ||||||| |||| |||| | |||| |||| ||||| ||||||||||    
T  4200229 agcttatatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacacttagatgataagtgcttatgctata 4200139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 27140487 - 27140391
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct---tatatgacaagtgtttatgctataa 116  Q
    ||||||||||| ||||||||||||  |||||||||| ||||||| ||||||||| || |||||| | ||   ||||||| |||||||||||||||||    
T  27140487 acagcttatataaaaacaatttaatattattttatcttttgttatagaaataacttacacataaacacttagtatatgataagtgtttatgctataa 27140391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 17269249 - 17269177
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||||||||||| ||||||||||  | ||||||  ||||||||| ||||||||||| |||||||||    
T  17269249 gcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 43372023 - 43372119
Alignment:
Q  19 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 115  Q
    ||||| ||||||| |||||| ||||| ||| |||||||||  |||||| ||||||| | |||||||||||| |||||||| ||| | ||||||||||    
T  43372023 gtttatagcttatgtgaaaataatttgactctattttatctattgttatagaaatagcctatacataagccattatatgataagcgcttatgctata 43372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 49557141 - 49557049
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||| ||||| || |||||||||||||||||| ||||||| ||||||||| ||||||  ||| ||||||||| ||||| ||| | ||||||    
T  49557141 agcttaaatgaatactatttaactttattttatcttttgttatagaaataacttatacagcagcacttatatgataagtgattacgttataag 49557049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 37841998 - 37841908
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaagtgtttatgctat 114  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||| | ||||||| ||  ||||| |||| ||||| |||||||||    
T  37841998 agcttatacgaaaacaatttaactttattttatcatttgttataggaatagcttatacatgagtacttatcatgataagtgcttatgctat 37841908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 49517070 - 49517012
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtataca 83  Q
    |||||| ||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||    
T  49517070 agcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 15360894 - 15360833
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| |||||||||  ||||||||    
T  15360894 agcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataa 15360833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 7274015 - 7274099
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 115  Q
    |||||||||||||| ||||||||| ||| ||||||| | ||||||| |||||||||||  |||||||| |||   ||||||||||    
T  7274015 tatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacataagcatttatatgataagcacttatgctata 7274099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 44032062 - 44032142
Alignment:
Q  18 agtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||| |||||||||||||||||||| ||||||||||| | ||||||| |||||   | ||||||||| | |||||||||    
T  44032062 agtttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatga 44032142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 52286685 - 52286605
Alignment:
Q  18 agtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||| ||||||||||||||   ||||||||||||||||| ||||||  ||||||| | ||| ||||||| |||||||||    
T  52286685 agtttatagcttatatgaaaattgtttaactttattttatcttttgttgtagaaatatcttattcataagcgcttatatga 52286605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 11211116 - 11211062
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtata 81  Q
    |||||||||||| ||||||||||||||||||| ||||||  ||||||||| ||||    
T  11211116 cttatatgaaaaaaatttaactttattttatcttttgttctagaaataacttata 11211062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 14737781 - 14737826
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataac 76  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaataac 14737826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 15687143 - 15687192
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||| ||||||||||||||||||||||||  ||||||| |||||||    
T  15687143 agcttatacgaaaacaatttaactttattttatattttgttatagaaata 15687192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 26630471 - 26630414
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||| |||||||||||||||||||| ||||||||| ||  ||||||| |||||||    
T  26630471 cagtttatagcttatatgaaaacaattttactttatttcattttttgttatagaaata 26630414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 31517810 - 31517859
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||||||||| |||||||||||||||||||| ||||||  |||||||    
T  31517810 agcttatatgaaatcaatttaactttattttatcttttgttgtagaaata 31517859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 47877119 - 47877033
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    ||||||||||||||||| | ||||||||||| |||||||  ||||||    ||||||||||  |||||||| ||||  |||||||||||||    
T  47877119 ttatatgaaaacaatttgattttattttatcttttgttattgaaata----atacataagcaattatatgataagtcattatgctataagt 47877033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 48830138 - 48830207
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||| |||||||||||||| | ||| ||||||||||||| || || | ||||||||| |||||||||    
T  48830138 cagtttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataa 48830207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 27738250 - 27738290
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgtt 65  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  27738250 agcttatatgaaaacaatttgactttattttatcttttgtt 27738290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 46499924 - 46499996
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 97  Q
    |||||| || |||||||||| ||||||||||||| ||| ||| ||||||| | |||| |||||| ||||||||    
T  46499924 agcttaaataaaaacaatttgactttattttatcttttcttatagaaatagcttatagataagcacttatatg 46499996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 50319286 - 50319230
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||||||| || ||||||||||||| ||||||| ||||||| | ||||||||||    
T  50319286 tatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataag 50319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 4549858 - 4549803
Alignment:
Q  33 tgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| | | |||||||||    
T  4549858 tgaagacaatttaactttattttatcttttgttatagaaatagcttgtacataagc 4549803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 6976942 - 6976879
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||| | ||||||||||| ||||| ||||||| ||||||| | |||||||||||| ||||    
T  6976942 tatgaaaatagtttaactttatcttatcttttgttatagaaatatcttatacataagccattat 6976879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 25006104 - 25006151
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 72  Q
    |||||||||||||||||||| ||||||||||| ||| ||||| |||||    
T  25006104 agcttatatgaaaacaatttgactttattttaccgtctgttatagaaa 25006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 34619448 - 34619511
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||||||  ||||||||||||| |||||||||| ||||||| ||||||  | |||||||||||    
T  34619448 agcttatacaaaaacaatttaaccttattttatcttttgttatagaaatggcttatacataagc 34619511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 36151577 - 36151636
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    |||||| ||||||||||| ||||||||||||| |||||||  |||||| | |||||||||    
T  36151577 cttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 45990128 - 45990187
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 84  Q
    |||||||||||||||||||| ||||||||||||| |||| || | ||||| | |||||||    
T  45990128 agcttatatgaaaacaattttactttattttatcttttgatataaaaatagcatatacat 45990187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 48748659 - 48748725
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||||||||||||| ||| |||| || ||||||| | ||||||||||| | |||||||    
T  48748659 tatgaaaacaatttaactttatttcatcttttg-tatagaaatagcttatacataagcacatatatga 48748725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 871046 - 870972
Alignment:
Q  24 cagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||||||| || || |||| |||||||| ||||||| | |||||   ||||||||||| |||||||||    
T  871046 cagcttatatgaaaaaaaattgacttaattttatcttttgttataaaaatagtttatacataagcacttatatga 870972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 1879095 - 1879145
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaat 73  Q
    |||||||||||||||||| ||| ||||||||||||| | ||||| ||||||    
T  1879095 acagcttatatgaaaacattttgactttattttatcttctgttatagaaat 1879145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 9656650 - 9656600
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa 75  Q
    |||||||||||||| ||||||||||||||||||  |||| || ||||||||    
T  9656650 agcttatatgaaaataatttaactttattttattttttgctatagaaataa 9656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 15799704 - 15799618
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgc 111  Q
    |||||||||||||||| ||| |||||||||  |  ||||||| ||||| | | |||||||||||  |||| ||| ||||||||||||    
T  15799704 agcttatatgaaaacagtttgactttatttctttttttgttaaagaaacatcatatacataagcaattatttgataagtgtttatgc 15799618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 23895332 - 23895230
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaa 128  Q
    ||||||| |||| ||| | ||||||||||| ||||||| ||||||| | |||||||||   ||||||||| ||| | ||||||| ||||| || ||| ||    
T  23895332 tatatgagaacagtttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataagggcttatgctttaagtgcttaattaa 23895233  T
Q  129 gtt 131  Q
    |||    
T  23895232 gtt 23895230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 4256112 - 4256173
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    |||||||| ||||| |||||||||||||| |||| ||||||  ||||||| | |||||||||    
T  4256112 agcttatacgaaaataatttaactttattgtatcttttgttgtagaaatagcttatacataa 4256173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 6074474 - 6074425
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||||||| ||||||||||| | ||| ||||||| |||||||    
T  6074474 agcttatatgaaaacagtttaactttatatcatcttttgttatagaaata 6074425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 7028294 - 7028229
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||||||||  ||||||| |||||||||||||||| |||| || |||||||   |||||||||||    
T  7028294 acagcttatacaaaaacaacttaactttattttatcttttgctatagaaatagtttatacataagc 7028229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 13037836 - 13037787
Alignment:
Q  53 tttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 102  Q
    |||||| ||||||| ||||||| | ||||||||||| |||||||||||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcacttatatgacaag 13037787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 13809988 - 13809947
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataac 76  Q
    |||||||||||||||||||||||| |||| || |||||||||    
T  13809988 aaaacaatttaactttattttatcttttgctaaagaaataac 13809947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 23544710 - 23544779
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||||||||||||||| |||| |||||||| |||   | ||||||| | ||||||||||| |||||    
T  23544710 agcttatatgaaaacaatttgacttaattttatctttttccatagaaatagcttatacataagcgcttat 23544779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 28467377 - 28467418
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    |||||||||||||| ||||| ||||||||||||| |||||||    
T  28467377 agcttatatgaaaataatttgactttattttatcttttgtta 28467418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 29929696 - 29929753
Alignment:
Q  30 atatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||||||| |||||||| |||||||  ||||||  |||||||| |||||||||||    
T  29929696 atatgaaaacagtttaacttcattttatgttttgttgaagaaataaagtatacataag 29929753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 30259557 - 30259650
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    ||||||||| ||| || ||| ||||||||||||  ||||||| ||||||| | | | ||||||| ||| ||||| |||||| |||| |||||||    
T  30259557 agcttatatcaaagcagtttgactttattttatattttgttatagaaatagcttgtgcataagcacttctatgataagtgtgtatgttataagt 30259650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 30371148 - 30371107
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    |||||||||||||||||||| | ||||||||||| |||||||    
T  30371148 agcttatatgaaaacaatttgagtttattttatcttttgtta 30371107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 30815707 - 30815752
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaa 72  Q
    |||||||||||| | ||||||||||||||||| ||||||| |||||    
T  30815707 cttatatgaaaatagtttaactttattttatcttttgttatagaaa 30815752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 33527388 - 33527339
Alignment:
Q  60 tttgttagagaaataacgtatacataagcccttatatgacaagtgtttat 109  Q
    ||||||| ||||||||| ||||||||||| ||||||  ||||||||||||    
T  33527388 tttgttaaagaaataacttatacataagcgcttataatacaagtgtttat 33527339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 34179934 - 34179983
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    ||||||| |||||| || |||||||||| ||||||||||||| |||||||    
T  34179934 cagtttatagcttagattaaaacaatttgactttattttatcttttgtta 34179983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 36070250 - 36070181
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||  ||| ||||||||||||||||||||| ||||||| | ||||| |  |||||||||| |||||    
T  36070250 agcttatccgaagacaatttaactttattttatcttttgttataaaaatagcccatacataagcgcttat 36070181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 40357963 - 40358016
Alignment:
Q  32 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 85  Q
    ||||||||||||| |||||||||||||  |||||| ||||||| | ||||||||    
T  40357963 atgaaaacaatttgactttattttatccattgttatagaaatagcttatacata 40358016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 45999358 - 45999427
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||||||| || ||| ||||||| ||||| ||||||| ||||||| | ||||||| ||| |||||    
T  45999358 agcttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacatgagcacttat 45999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 47498905 - 47498946
Alignment:
Q  24 cagcttatatgaaaacaatttaactttattttatcgtttgtt 65  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||    
T  47498905 cagcttatacgaaaataatttaactttattttatcttttgtt 47498946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 49365821 - 49365870
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    ||||||| ||||| |||||||||||||| ||| ||||||||| |||||||    
T  49365821 cagtttatagcttgtatgaaaacaatttgactctattttatcttttgtta 49365870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 15784337 - 15784305
Alignment:
Q  24 cagcttatatgaaaacaatttaactttatttta 56  Q
    ||||||||| |||||||||||||||||||||||    
T  15784337 cagcttatacgaaaacaatttaactttatttta 15784305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 28788608 - 28788648
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgtt 65  Q
    |||||||||||||||| ||| ||||||||||||| ||||||    
T  28788608 agcttatatgaaaacagtttgactttattttatcctttgtt 28788648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 45107620 - 45107533
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 115  Q
    |||||||||||| | ||| ||||||||||||  ||| ||| ||||||| | |||| |||||| ||||||||| |  |||||||||||||    
T  45107620 cttatatgaaaatagtttgactttattttatt-tttcttatagaaatagcttatagataagcacttatatgatagatgtttatgctata 45107533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 1145 - 1250
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaat 125  Q
    |||||||||| || | ||| ||||||||||||| ||||||| ||||||| | ||||||||||| ||||||||| |   |||||||||||||||||| |||    
T  1145 gcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaat 1244  T
Q  126 gaagtt 131  Q
     |||||    
T  1245 taagtt 1250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 2830 - 2725
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaat 125  Q
    |||||||||| || | ||| ||||||||||||| ||||||| ||||||| | ||||||||||| ||||||||| |   |||||||||||||||||| |||    
T  2830 gcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaat 2731  T
Q  126 gaagtt 131  Q
     |||||    
T  2730 taagtt 2725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 29588884 - 29588788
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||| ||||||||||||||||||||  | |||||||||  ||||||| ||||||| | ||||||||||| ||||||| | ||||||||||||||||||    
T  29588884 tttatagcttatatgaaaacaatttt-cattattttatattttgttatagaaatagcttatacataagcacttatataaaaagtgtttatgctataag 29588788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 20982208 - 20982324
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatga 127  Q
    ||||||||||||   || ||||||||||||| ||||||| ||||||| | ||||||||||| ||||||||| |||   |||||||||||| ||| |||||    
T  20982208 ttatatgaaaacgggttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaatga 20982307  T
Q  128 agtttttaatgcaaaca 144  Q
    |||| || || ||||||    
T  20982308 agttgtttatccaaaca 20982324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 37063146 - 37063238
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagta 119  Q
    |||||||||||| | ||| ||||||||||||| ||||||| |||||||   |||||||||||  ||||||||||||  |||||||||||||||    
T  37063146 cttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataagta 37063238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 9202819 - 9202887
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||||||||||||||||||||||||||| |||| || ||||||| | |||| |||||| |||||    
T  9202819 gcttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcacttat 9202887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 38819672 - 38819736
Alignment:
Q  52 ttttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||| |||||| ||||    
T  38819672 ttttatcttttgttatagaaatagcgtatacataagcccttatatgataagtgcttatgccataa 38819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 29117000 - 29117061
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    |||||||| ||||||| ||| ||||||||||||| ||||||| ||||||||| |||||||||    
T  29117000 agcttatacgaaaacagtttgactttattttatcttttgttatagaaataacatatacataa 29117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 6738484 - 6738568
Alignment:
Q  32 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||| ||||| |||||||||| || ||| |||  |||||| | ||||||||||  ||||||||| |||||||||||||||||    
T  6738484 atgaaaagaatttgactttattttgtcttttattattgaaatagcttatacataagtacttatatgataagtgtttatgctataa 6738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 12595813 - 12595857
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaa 72  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||    
T  12595813 ttatatgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 35135732 - 35135804
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 97  Q
    |||||||||||||| | ||| ||||||||||||| ||||||| ||||||| | ||||||||| | ||||||||    
T  35135732 agcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatg 35135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 27104525 - 27104576
Alignment:
Q  66 agagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||    
T  27104525 agagaaataacttatacgtaagcacttatatgataagtgtttatgctataag 27104576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 27106010 - 27106085
Alignment:
Q  42 tttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||||||||| ||||||| |||||| || ||||| ||||| ||||||  | ||||||||||||| ||||    
T  27106010 tttaactttattttatcttttgttatagaaatgacttatacgtaagcacttatacaataagtgtttatgctgtaag 27106085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 40097483 - 40097546
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||| ||||||||| | ||||| ||||||||| |||||||| || |||||||||    
T  40097483 aaaacaatttaactctattttatcttctgttatagaaataacttatacatacgcacttatatga 40097546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 10363743 - 10363701
Alignment:
Q  32 atgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  10363743 atgaaaacaatttaactttattttatcttttgttatagaaata 10363701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 28586839 - 28586897
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||||||||| ||| ||||||||||||| ||||||| |||||||  ||||||||||    
T  28586839 ttatatgaaaacagtttgactttattttatcttttgttatagaaatagtgtatacataa 28586897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 14295506 - 14295457
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| |||||||    
T  14295506 agcttatatgaaaacagtttgactttattttatcttttgttatagaaata 14295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 26516275 - 26516206
Alignment:
Q  48 tttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||| ||||||  ||||||| | ||||||||||| ||||||||| ||| | ||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataag 26516206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 32059659 - 32059743
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatg 110  Q
    |||||||||||||||| ||| ||||||||||||| || |||| | ||| | | ||||||||||| ||||||||| |||| ||||||    
T  32059659 agcttatatgaaaacagtttgactttattttatc-ttagttacaaaaacagcttatacataagcacttatatgataagtatttatg 32059743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 38047929 - 38047986
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    |||||||||| ||||| ||||||||||||| ||||||||||| ||| | |||||||||    
T  38047929 tatatgaaaataatttgactttattttatcttttgttagagatatagcttatacataa 38047986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 465956 - 465892
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||||||  |||||||||||||||||||||||| ||||| | ||||||| | |||| |||||    
T  465956 acagcttatacaaaaacaatttaactttattttatcttttgtcatagaaatagcttatatataag 465892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 985633 - 985573
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 85  Q
    ||||||| |||||||| ||| ||||||||||||| |||||||  |||||||| ||||||||    
T  985633 agcttatgtgaaaacagtttgactttattttatcttttgttatggaaataacatatacata 985573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 10391329 - 10391265
Alignment:
Q  49 ttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgcta 113  Q
    |||||||||| ||||||| | ||||| | ||||| ||||| ||||||||| ||||||||||||||    
T  10391329 ttattttatcttttgttataaaaatagcttatacgtaagcacttatatgataagtgtttatgcta 10391265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 17756808 - 17756872
Alignment:
Q  34 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||| ||||||||||||| | ||||| ||||| |||  |||||||||| |||||||||    
T  17756808 gaaaacaatttgactttattttatcttctgttaaagaaacaactcatacataagcacttatatga 17756872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 33459016 - 33459068
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    |||||||| ||||||||||| || ||||||| ||||||||| |||||||||||    
T  33459016 aaacaattcaactttattttgtcttttgttatagaaataacttatacataagc 33459068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 40048359 - 40048419
Alignment:
Q  34 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||| ||| ||||||||||||||| ||||||| ||||| ||| ||||||||||| |||||    
T  40048359 gaaaataatataactttattttatcttttgttatagaaacaacttatacataagcacttat 40048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 7319414 - 7319379
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttat 52  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7319414 cagtttatagcttatatgaaaacaatttaactttat 7319379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 8158366 - 8158409
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttg 63  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||    
T  8158366 tttaaagcttatatgaaaataatttaactttattttatcttttg 8158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 29115304 - 29115375
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||| | ||||||  ||||||| | ||||||||||| ||| ||||| || |||||||||||||||    
T  29115304 actttattttaccttttgttgtagaaatagcttatacataagcacttttatgataaatgtttatgctataag 29115375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 39128646 - 39128547
Alignment:
Q  18 agtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||| || |||| ||| |||||||| ||||||||||||| ||||||| |||| || | ||||||||||| | ||||| | ||  | ||||||||||||    
T  39128646 agtttatagtttatttgagaacaatttgactttattttatcttttgttatagaattagcttatacataagcacatatattaaaaaagcttatgctataag 39128547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 42583140 - 42583089
Alignment:
Q  34 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 85  Q
    ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||    
T  42583140 gaaaacaatttaactttatttcatcttttgttatagaaataccttatacata 42583089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 7853647 - 7853609
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  7853647 aaacaatttaactttattttatcttttgttatagaaata 7853609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 10303794 - 10303752
Alignment:
Q  32 atgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||    
T  10303794 atgaaaacaatttgactttattttatcttttgttatagaaata 10303752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 36539746 - 36539668
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagt 103  Q
    ||||||||||||||||  || ||||||||||||| |||| || | ||||| | || |||||||| ||||||||| ||||    
T  36539746 agcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcacttatatgataagt 36539668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 912719 - 912792
Alignment:
Q  26 gcttatatgaaaacaattta-actttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||||||||  ||||||||||||  | ||||| ||||||||| ||| ||||| | |||||||||    
T  912719 gcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttattcataaacgcttatatga 912792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 7674647 - 7674586
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||| ||||||||||||| ||||||||||| |||| || ||||||| | |||| |||||    
T  7674647 gcttataagaaaacaatttaaatttattttatcttttggtatagaaatagcttatatataag 7674586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 12425571 - 12425538
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatc 58  Q
    |||||||| |||||||||||||||||||||||||    
T  12425571 agcttatacgaaaacaatttaactttattttatc 12425538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 26209483 - 26209545
Alignment:
Q  25 agcttatat-gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||||||| ||||||||||  |||||||||||||  |||||| ||||||||| |||||||||||    
T  26209483 agcttatattgaaaacaattggactttattttatc--ttgttatagaaataacttatacataagc 26209545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 34112875 - 34112806
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||||||||||| ||||||||| || ||| |||  || ||||||| | ||||||||||| |||||    
T  34112875 agcttatatgaaaacaacttaactttaattaatcttttactatagaaatagcttatacataagcgcttat 34112806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 34690853 - 34690812
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||    
T  34690853 actttattttatcttttgttatagaaatagcgtatacataag 34690812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 35963244 - 35963155
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    |||||||||||| ||||| ||||||| ||| ||| ||| ||||||||  |||||| |||| ||||| ||| ||  | |||||||||||||    
T  35963244 tatatgaaaacagtttaattttatttgatcttttcttatagaaataatttatacacaagcacttatttgataatcgcttatgctataagt 35963155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 39823191 - 39823284
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa-cgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||||||||||  | ||| ||||||||||||| ||||||| | |||||| |  |||||||||||||| ||| ||||| | ||||||| ||||    
T  39823191 agcttatatgaaagtagtttgactttattttatcttttgttatataaataatctgatacataagcccttctataacaagcgcttatgctgtaag 39823284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 40452281 - 40452224
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctt 92  Q
    |||| ||||||||||||||||||  |||| || ||||||| | |||||||||||||||    
T  40452281 aaaataatttaactttattttattatttgctatagaaatatcttatacataagccctt 40452224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 4855696 - 4855636
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||||| |||||||||||||||||||||  ||||||| | ||||| |  |||||||||    
T  4855696 cttatatgataacaatttaactttattttattttttgttataaaaatagctaatacataag 4855636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 7096218 - 7096270
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||||| ||||||| ||||||| | ||||||||||| ||| |||||    
T  7096218 actttattttatcttttgttatagaaatagcttatacataagcacttgtatga 7096270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 11835268 - 11835236
Alignment:
Q  34 gaaaacaatttaactttattttatcgtttgtta 66  Q
    ||||||||||||||||||||||||| |||||||    
T  11835268 gaaaacaatttaactttattttatcttttgtta 11835236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 14714910 - 14715001
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||||||||  ||||||||  |||||  ||||||| ||||||| | ||||||||| | |||||| || ||| |||||||| |||||    
T  14714910 agcttatatgaaaacagcttaacttt-gtttatgttttgttatagaaatagcttatacataatcacttatacgagaagcgtttatgccataag 14715001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 32172653 - 32172561
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||||||| |||||| || |||| |||||||| ||||||  |||||||   ||||||||||| ||| ||||| ||| | ||||||| ||||    
T  32172653 agcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataagcgcttatgctgtaag 32172561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 34117627 - 34117675
Alignment:
Q  49 ttattttatcgtttgttagagaaataacgtatacataagcccttatatg 97  Q
    |||||||||| ||||||| ||||||||| ||||||||||| || |||||    
T  34117627 ttattttatcttttgttaaagaaataacttatacataagcactaatatg 34117675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 39257477 - 39257577
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaagtttttaatgcaaacaa 145  Q
    ||||||||||| | ||||||| ||| ||| | ||||||||||| |||| |||| ||  ||||||||||||||  || ||| ||||| || || |||||||    
T  39257477 actttattttaccttttgttatagagatagcatatacataagcacttacatgataatagtttatgctataagcgcttaattaagttgtttatccaaacaa 39257576  T
Q  146 g 146  Q
    |    
T  39257577 g 39257577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 30024700 - 30024627
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||| ||||||  |||||||||    
T  30024700 agcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatga 30024627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 22684584 - 22684659
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| ||||||| | |||||| ||||  ||||||||    
T  22684584 acagcttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatatga 22684659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 25409894 - 25409795
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||| | ||||||||||||||||||||| |||| ||||| ||| |||  |||||| | || ||||||||  |||||||| |||||||||||||||||    
T  25409894 cagtttatatcttatatgaaaacaatttaaccttatcttatctttttttaatgaaataccttagacataagcagttatatgataagtgtttatgctataa 25409795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 26883995 - 26883934
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||||||| |||||||||    
T  26883995 agcttatatgaaaacaatttaacttcattttatctcttcttagagaaataacttatacataa 26883934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 30338654 - 30338725
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||||| |||||||||||||||| |||||||||||| |||| ||||||| |||||||   |||||||||||    
T  30338654 cagtttatagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacataagc 30338725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 24193583 - 24193465
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatg 126  Q
    |||||||||||| | ||||||| | ||||||  ||||||  | ||||||| ||||||||||  ||||||||| ||| ||||||||||||||| || |||     
T  24193583 cttatatgaaaatagtttaactctgttttatattttgttgtaaaaataacttatacataagtacttatatgataagcgtttatgctataagtgctcaatt 24193484  T
Q  127 aagtttttaatgcaaacaa 145  Q
    ||||| || || |||||||    
T  24193483 aagttgtttatccaaacaa 24193465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 29263369 - 29263307
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    |||||| |||||||||| ||||||||||||||| | ||||||||||||||| |||| ||||||    
T  29263369 gcttatttgaaaacaatgtaactttattttatcatctgttagagaaataacttatagataagc 29263307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 8130182 - 8130103
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat 96  Q
    ||||||| |||||||||||||| ||||| ||||||| ||||| ||||||| ||||| |||  |||| ||||| |||||||    
T  8130182 cagtttatagcttatatgaaaataatttgactttatgttatcttttgttatagaaagaactcatacgtaagcacttatat 8130103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 8703690 - 8703784
Alignment:
Q  25 agcttatatgaaaacaatttaa--ctttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||||||||||||| ||| |  |||| ||||||| ||||||||||||||| | ||||||||||| || || ||| |||| |||||| ||||||    
T  8703690 agcttatatgaaaacagtttgatacttttttttatcctttgttagagaaatagcttatacataagcactcatctgataagtatttatgttataag 8703784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 27043900 - 27043963
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    |||||||| ||||||||||||||||||||||||| ||||||| | || || | |||||||||||    
T  27043900 agcttatacgaaaacaatttaactttattttatcctttgttatataagtaccttatacataagc 27043963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 30207641 - 30207719
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtg 104  Q
    |||||||||||||||| ||| | ||||||||||  ||||||| |||| |||| ||||||||||| ||||||||| |||||    
T  30207641 agcttatatgaaaacagtttga-tttattttattttttgttatagaactaacatatacataagcacttatatgataagtg 30207719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 49803214 - 49803151
Alignment:
Q  22 tacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 85  Q
    |||| ||||| ||||||||||||||||| |||||||| |||| || ||||||||| ||||||||    
T  49803214 tacaacttatgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 49803151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 54325107 - 54325190
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgttta 108  Q
    |||||||||||||||| ||| ||||||||||||| ||||| | |||||||   |||||| |||| ||||||||| |||| ||||    
T  54325107 agcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttatatgataagtattta 54325190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 35727109 - 35727195
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||| |||||||| ||||||| | | ||||||| ||||||| | ||  ||||||||||| ||||| |||||| |||||||||||    
T  35727109 tatgaaatcaatttaattttatttgaacttttgttatagaaatagcttacgcataagcccttttatgataagtgtgtatgctataag 35727195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 47119035 - 47119085
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa 75  Q
    |||||||||||||||||||||||||| ||||||| |||| || ||||||||    
T  47119035 agcttatatgaaaacaatttaactttgttttatcttttgatatagaaataa 47119085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 47970310 - 47970240
Alignment:
Q  33 tgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagt 103  Q
    |||||| | ||| |||| |||||||| ||||||| ||||||| | ||||||||||| ||||||||||||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttatatgacaagt 47970240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 4071882 - 4071833
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| |||||||    
T  4071882 agcttatatgaaaataatttgactttattttatcttttgttatagaaata 4071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 31038939 - 31038996
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 84  Q
    |||||||||||||||||| |||||||||||||  || ||  |||||||||||||||||    
T  31038939 cttatatgaaaacaatttgactttattttatctattattgtagaaataacgtatacat 31038996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 44319949 - 44319861
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctat 114  Q
    |||||||||||||||| ||  ||||||||||||| ||| ||| |||||||   ||||||| ||| ||||||||| ||||| |||||||||    
T  44319949 agcttatatgaaaacagttcgactttattttatc-ttttttatagaaatagtttatacatgagcacttatatgataagtgcttatgctat 44319861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 49219139 - 49219082
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatac 82  Q
    |||||||||||||| ||||| ||||||||||||  ||||||| ||||||||| |||||    
T  49219139 agcttatatgaaaataatttgactttattttatattttgttatagaaataacttatac 49219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 486073 - 485989
Alignment:
Q  34 gaaaacaatttaacttt-attttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||| ||||| |||||||| ||||||  ||||||| | ||||||||||| ||| ||||| ||| | ||||||||||||    
T  486073 gaaaacaatttgacttttattttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttatgctataag 485989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 4191734 - 4191666
Alignment:
Q  31 tatgaaaacaatttaactttatttt-atcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||| ||| |||||||||| ||| ||||||| ||||||| | ||||||||||| |||||||||    
T  4191734 tatgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatga 4191666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 24160983 - 24160927
Alignment:
Q  32 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||| | |||||||||||    
T  24160983 atgaaaataatttaacttgattttatcctttgttatagaaatagcttatacataagc 24160927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 47800632 - 47800580
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa 75  Q
    ||||||||||  |||||| ||||||||||||||||| ||||||| ||||||||    
T  47800632 acagcttatacaaaaacattttaactttattttatcttttgttatagaaataa 47800580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 47946203 - 47946135
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    |||| |||||||| |||||||||||||||| |||||||| |  |||| ||||||||| |||| ||||||    
T  47946203 tttatagcttatacgaaaacaatttaacttcattttatcttacgttatagaaataacttataaataagc 47946135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 5131309 - 5131364
Alignment:
Q  32 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||||| ||||||||||||||||| ||||||| | ||| ||| ||||||||||    
T  5131309 atgaaaacattttaactttattttatcttttgttatataaacaacttatacataag 5131364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 7601749 - 7601690
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||||||||||||||||||| |||| || || |||| | ||||||||||| |||||    
T  7601749 aaaacaatttaactttattttatcctttgctataggaatagcttatacataagcgcttat 7601690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 17884058 - 17884019
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  17884058 aaaacaatttaactttattttatcttttgttatagaaata 17884019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 25548182 - 25548298
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaagt 130  Q
    ||||||||||| |||||||||||||| |  |||||| ||||||| | ||| ||||||| ||| |||| |||||| ||||| ||||| | || ||| || |    
T  25548182 tatgaaaacaacttaactttattttacc--ttgttatagaaatagcttatgcataagcacttttatggcaagtgcttatgatataattgcttaattaaat 25548279  T
Q  131 ttttaatgcaaacaagacc 149  Q
    | ||||| |||||| ||||    
T  25548280 tgttaatccaaacaggacc 25548298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 41701509 - 41701552
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  41701509 acagcttatatgaaaacgatttgactttattttatcttttgtta 41701552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 50298527 - 50298438
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaagtgtttatgctataag 117  Q
    ||||||| |||||||||||||||||||  |||||  ||||||  |||| ||| |||||||||||  |||| |||| ||||||||||||||||||    
T  50298527 agcttatgtgaaaacaatttaacttta--ttatc--ttgttatggaaacaacttatacataagcatttatcatgataagtgtttatgctataag 50298438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 3155593 - 3155543
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 85  Q
    |||||||||||||||||||||||| |||| || ||||||| | ||||||||    
T  3155593 aaaacaatttaactttattttatcttttgctatagaaatagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 5219573 - 5219643
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||| | ||||||||||||||||| ||| ||| ||| ||| | ||||||| ||| |||||||||    
T  5219573 ttatatgaaaatagtttaactttattttatcttttattatagagatagcatatacatgagcacttatatga 5219643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 6364149 - 6364087
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||| |||| | ||||| ||||||||||||| ||||||| ||||||| | ||||||||||    
T  6364149 agcttatgtgaacagaatttcactttattttatcttttgttatagaaatagcttatacataag 6364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 11389523 - 11389457
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||| |||||| |||||||||| |||||| ||| ||| ||||||||  ||||||||||| |||||    
T  11389523 ttatattaaaacagtttaactttactttatctttttttatagaaataatttatacataagcacttat 11389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 19422415 - 19422345
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||   ||| |||||||| |||| ||||||| ||||||||| |||||||||||  ||||||||    
T  19422415 ttatatgaaaaatgtttgactttattatatcttttgttatagaaataacttatacataagcatttatatga 19422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 28623272 - 28623218
Alignment:
Q  42 tttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat 96  Q
    |||||| |||||||||| ||||||| | ||||||| ||||||||||| |||||||    
T  28623272 tttaacattattttatcttttgttatataaataacttatacataagcacttatat 28623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 42321952 - 42321990
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  42321952 ttatatgaaaacaatttgactttattttatcatttgtta 42321990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 44119227 - 44119293
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    |||| ||||||||||||||||  || ||||| ||||||| |||| || ||||||||| |||||||||    
T  44119227 tttatagcttatatgaaaacatattgactttgttttatcttttgctatagaaataacttatacataa 44119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 51555948 - 51556030
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    ||||||| | ||||||||||||| ||||||| |  |||| | ||||||||||| ||||||||| || || ||||| |||||||    
T  51555948 aaacaatctgactttattttatcttttgttataataatagcttatacataagcacttatatgataaatggttatgttataagt 51556030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 51630111 - 51630073
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttg 63  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  51630111 agcttatatcaaaacaatttaactttattttatcttttg 51630073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 13949914 - 13949947
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatc 58  Q
    |||||||||||||||||||| |||||||||||||    
T  13949914 agcttatatgaaaacaatttgactttattttatc 13949947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 18630680 - 18630607
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||||||| | || ||||||||||||| |||||||  ||||||   ||| ||||||| |||||||||    
T  18630680 agcttatatgaaaaccaattgactttattttatcttttgttattgaaatagtttatgcataagcgcttatatga 18630607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 54327519 - 54327576
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatac 82  Q
    |||||||||||||||| ||| ||||| ||||||| ||||||| ||||| ||| |||||    
T  54327519 agcttatatgaaaacagtttgactttgttttatcttttgttatagaaacaacttatac 54327576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 437504 - 437540
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttg 63  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  437504 cttatatgaacacaatttaactttattttatcttttg 437540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 4663760 - 4663836
Alignment:
Q  19 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 95  Q
    |||| |||||||||| |||| | |||  ||| |||||||  ||||||| ||||||||| ||||||||||| ||||||    
T  4663760 gttttcagcttatataaaaatagtttggcttcattttattctttgttatagaaataacttatacataagcacttata 4663836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 8422909 - 8422998
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||||||||||||||   ||||||||||||| ||| ||| | ||||| | ||||||||||| | ||||||| |  || |||||||||||    
T  8422909 agcttatatgaaaacaatg--actttattttatctttttttataaaaatagcttatacataagcacatatatgatacatgattatgctataa 8422998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 11917556 - 11917508
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 76  Q
    ||||||||||| ||||| ||||||||||||| ||||||| | |||||||    
T  11917556 ttatatgaaaataatttgactttattttatcttttgttacaaaaataac 11917508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 24444038 - 24443946
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||||||   ||| | ||||||||||  ||||||  ||||||  | ||||||||||  ||||||||| ||||| ||||||||||||    
T  24444038 agcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataag 24443946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 32724125 - 32724037
Alignment:
Q  19 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgttt 107  Q
    |||||| ||||||||||||| | ||| ||||||||||||| ||||| | |||||||   || |||||||| || |||||| ||| ||||    
T  32724125 gtttacggcttatatgaaaatagtttgactttattttatcttttgtaatagaaatagattagacataagcactgatatgagaagcgttt 32724037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 44249285 - 44249225
Alignment:
Q  26 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||| | ||| ||||||||||| ||||||| |||||||  |||||||| |||||||||    
T  44249285 gcttatacggaaataatttaactttgttttatcttttgttattgaaataacttatacataa 44249225  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 51044534 - 51044590
Alignment:
Q  31 tatgaaaacaa-tttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||||||| ||| ||||||||||||| ||||||| ||||||| | |||||||||    
T  51044534 tatgaaaacaagtttgactttattttatcttttgttatagaaatagcttatacataa 51044590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 38462289 - 38462194
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgct 112  Q
    ||||||| ||| |||||||||||| ||| ||||||||||||| |||| || ||||||| | |||| |||| | ||||||||| |||||||||||||    
T  38462289 cagtttatagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataagtgtttatgct 38462194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 10101548 - 10101597
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 76  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  10101548 cttatatgaaaacaatttaactttattttatcttttgttatagaaataac 10101597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 10212473 - 10212522
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 76  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  10212473 cttatatgaaaacaatttaactttattttatcttttgttatagaaataac 10212522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 42809303 - 42809242
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 84  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| ||||||| | |||||||    
T  42809303 acagcttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 905034 - 905113
Alignment:
Q  19 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||| |||||||||| |||||| || ||||||||||||| ||||||| ||||||| | ||||| ||||| |||||||||    
T  905034 gtttaaagcttatatgcaaacaaattgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatga 905113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 15304411 - 15304466
Alignment:
Q  19 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  15304411 gtttagagtttatatgaaaacaatttaactttattttatcttttgttatagaaata 15304466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 44374720 - 44374787
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||| ||||||||||||| ||||||| ||| ||| | ||||||||||| |||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatga 44374787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 20173982 - 20174048
Alignment:
Q  49 ttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 115  Q
    |||||||||| ||||||| |||||||||  |||||||||| ||||||| || |||||||||||||||    
T  20173982 ttattttatcttttgttatagaaataactaatacataagcacttatataactagtgtttatgctata 20174048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 39971309 - 39971227
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||  |||||||||||| ||||||| | || |||| ||||||||||| ||||||||| ||||||| ||| ||||||    
T  39971309 aaaacaatttggctttattttatcttttgttatataagtaacttatacataagcacttatatgataagtgttgatgttataag 39971227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 42808981 - 42808932
Alignment:
Q  23 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 72  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  42808981 acagcttatataaaaacaatttaactttattttatcttttgttatagaaa 42808932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 1395671 - 1395611
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 85  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| ||||||| | ||||||||    
T  1395671 agcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 22214754 - 22214830
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtg 104  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||  |||||||| || |||||| || |||||    
T  22214754 ttatatgaatacaatttcactttattttatcctttgttatagaaataatttatacatacgcacttatacgataagtg 22214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 41028921 - 41029013
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||| ||||||||  || |||||||||| || ||||||| ||||||| | ||||||||||| ||||||||| |||  |||| ||||||||    
T  41028921 agcttatttgaaaacagattgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataagcatttaagctataag 41029013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 2128331 - 2128382
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    |||||||||||||||||||||||| ||||||| ||||||| | |||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttatacataa 2128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 36189556 - 36189493
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||||||||||||| ||||| ||||||||| | ||||||||  | |||||||||    
T  36189556 aaaacaatttaactttattttatcttttgtaagagaaatagcttatacatactcacttatatga 36189493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 3015927 - 3016016
Alignment:
Q  33 tgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaa 123  Q
    |||||||| ||| |||| |||||||| ||||||| ||||||||   |||||||||| ||||||| | ||||||||||| |||||| |||||    
T  3015927 tgaaaacagtttgacttcattttatc-tttgttatagaaataattaatacataagcacttatataataagtgtttatgttataagcactaa 3016016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 48364956 - 48365010
Alignment:
Q  32 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||||||||| ||||||||||||| |||||||  |||||||| |||||||||    
T  48364956 atgaaaacaatttgactttattttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 10357431 - 10357382
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 76  Q
    |||||||||||| |||||||| |||||||||| ||||||| |||||||||    
T  10357431 cttatatgaaaaaaatttaacattattttatcttttgttatagaaataac 10357382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 49586986 - 49587035
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| |||||||    
T  49586986 agcttatatgaaaacagtttgactttattttatcttttgttatagaaata 49587035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 8007765 - 8007837
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 97  Q
    ||||||||||| |||| ||| |||||| |||||| ||||||| ||||| | | ||||||||||||||| ||||    
T  8007765 agcttatatgataacagtttgactttactttatcttttgttatagaaacagcttatacataagcccttgtatg 8007837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 16790181 - 16790249
Alignment:
Q  48 tttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||||||| ||||||| ||||||||| |||| |||||| ||||||||| ||  | |||||||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttatatgataaacgcttatgctataa 16790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 33307652 - 33307728
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagt 103  Q
    |||||||||||| ||||| ||||||||| ||  |||||||  |||||| | ||||||||||| ||||||||| ||||    
T  33307652 cttatatgaaaataatttgactttatttcatattttgttactgaaatagcttatacataagcacttatatgataagt 33307728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 37689447 - 37689495
Alignment:
Q  18 agtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    |||||| |||||||||||||| |||||||||||| |||||| |||||||    
T  37689447 agtttatagcttatatgaaaataatttaactttactttatcttttgtta 37689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 22232824 - 22232753
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||| ||| ||||||||||||| ||||||| | ||||| | ||||||| |||  ||||||||    
T  22232824 cttatatgaaaacagtttgactttattttatcatttgttatataaatagcttatacatgagcatttatatga 22232753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 24158582 - 24158649
Alignment:
Q  36 aaacaatttaactttattttat-cgtttgttagagaaataacgtatacataagcccttatatgacaag 102  Q
    ||||| ||| |||||| ||||| | ||||||| ||||||||| ||||||||||| |||||||||||||    
T  24158582 aaacagtttcactttactttattcatttgttatagaaataacttatacataagcacttatatgacaag 24158649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 32095271 - 32095334
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| |||| || ||  |||||||||    
T  32095271 aaaacaatttaacttaattttatcttttgttatagaaataacttatatatgagtgcttatatga 32095334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 32703143 - 32703048
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 115  Q
    |||| |||||||||||||||||||| | ||||||||||| ||| | | ||||||| | ||||||||| |  |||||||| || ||  |||||||||    
T  32703143 tttatagcttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataaatggatatgctata 32703048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 35127451 - 35127510
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||||||||||| | |||| ||||||| ||||||| | ||||||||||| |||||    
T  35127451 aaaacaatttaactttagtatatcttttgttatagaaatagcctatacataagcacttat 35127510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 52619001 - 52618954
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||||||||||||||||||||| ||| ||||||  |||||||    
T  52619001 cttatatgaaaacaatttaactttatttaatcatttgttttagaaata 52618954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 21367862 - 21367824
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttatttt 55  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  21367862 cagtttacagcttatatgaaaacattttgactttatttt 21367824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 21574491 - 21574366
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaa 124  Q
    |||||||||| ||||||||||||||||||||||| | || || | ||| |||  |||||||| | |||| |||| ||| |||||| ||||||| ||| ||    
T  21574491 agcttatatgtaaacaatttaactttattttatcttgtg-tataaaaacaactcatacataaacacttacatgagaagcgtttatactataagcacttaa 21574393  T
Q  125 tgaagtttttaatgcaaacaagaccta 151  Q
    | ||||  || || |||||| ||||||    
T  21574392 ttaagtagtttatccaaacaggaccta 21574366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 21862245 - 21862339
Alignment:
Q  25 agcttatatgaaaacaatttaactt-tattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    |||||||||||||||||||| |||| ||||||||| ||||| | ||||| | | |||||  |||| |||||| || ||  |||||||||||||||    
T  21862245 agcttatatgaaaacaatttgacttgtattttatcttttgtaatagaaacagcttatacgcaagcacttataagataaacgtttatgctataagt 21862339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 27792873 - 27792799
Alignment:
Q  24 cagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||||||||| | ||| || |||||||||| ||||||   |||||| | ||||||||||| |||||||||    
T  27792873 cagcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttatatga 27792799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 36783407 - 36783453
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||||||||||||| ||||||||||||| |||| || |||||||    
T  36783407 ttatatgaaaacaattttactttattttatcttttggtatagaaata 36783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 45433004 - 45433058
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||| |||| |||||||||||||||||||| |||||||| ||| ||| |||||||    
T  45433004 tttatagctcatatgaaaacaatttaacttcattttatcttttcttatagaaata 45433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 20192679 - 20192744
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 93  Q
    ||||||||||||  ||| ||||||||||||| ||||||| | ||||| | ||||||||||| ||||    
T  20192679 ttatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 26990730 - 26990685
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||| ||||| ||||||||||||| ||||||| |||||||    
T  26990730 tatatgaaaagaatttgactttattttatcttttgttatagaaata 26990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 33405237 - 33405286
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    ||||||||||||||||| |||||||||||||| | |||| || |||||||    
T  33405237 agcttatatgaaaacaaattaactttattttaccttttgctatagaaata 33405286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 49772747 - 49772828
Alignment:
Q  34 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 115  Q
    ||||||||||  ||||||||||||  ||| ||| | ||||| | ||||||||| | ||||||||| |||||| |||||||||    
T  49772747 gaaaacaattagactttattttattttttattacaaaaatagcttatacataaacacttatatgataagtgtctatgctata 49772828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 37795604 - 37795564
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttat 57  Q
    ||||||| |||||||| |||||||||||||| |||||||||    
T  37795604 cagtttatagcttatacgaaaacaatttaaccttattttat 37795564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 40122828 - 40122884
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    |||||||||| ||| ||||||||||||| |||||||  |||||| | ||||||||||    
T  40122828 tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 51455852 - 51455939
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||| |||||||| ||||||||||||| ||||||| | ||||||  | ||||||| | |  |||| | ||||||||||||||||||    
T  51455852 tatatgacaacaatttcactttattttatcttttgttata-aaataatttttacataaacaccaatatcataagtgtttatgctataag 51455939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 31884599 - 31884501
Alignment:
Q  20 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    |||| ||||||||||||||||||| || || |||||||  ||||||| ||||||||| |||||||| || ||| ||||| ||| | |||||||||||||    
T  31884599 tttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacatatgcacttgtatgataagcgcttatgctataagt 31884501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 37444485 - 37444573
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaagtgtttatgct 112  Q
    |||||||| |||||||||||||||||| |||||| ||||||| || |||| | ||||||||||| ||||| |||| ||||| |||||||    
T  37444485 agcttatacgaaaacaatttaactttactttatcttttgttatagtaatagcttatacataagcgcttatcatgataagtgcttatgct 37444573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 1112853 - 1112790
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 88  Q
    ||||||| ||||||||||||||| |||||||||| ||||||| ||||||| | |||||||||||    
T  1112853 agcttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacataagc 1112790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 34563229 - 34563158
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||||| ||||| | ||||||||| |||| |||||| ||||||||| || |||||||||||||||    
T  34563229 actttattttatcctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataag 34563158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 29699252 - 29699162
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||| |||| |||| ||| ||||||||||||| ||||||| ||||||||| | |||||||||  |||||||| || | |||||||||||||    
T  29699252 cttagatgacaacattttgactttattttatcttttgttatagaaataacttgtacataagcatttatatgataaatatttatgctataag 29699162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 7026729 - 7026644
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgct 112  Q
    |||||||||||||||||| ||||||||||||| ||||||| |  | || | ||| ||||||| ||||||||| || ||||||||||    
T  7026729 cttatatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatatgataaatgtttatgct 7026644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 42237492 - 42237533
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  42237492 agcttatatgaaaacaatttaactttattttatcttttgtta 42237533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 4558794 - 4558674
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaa 128  Q
    |||||||||| ||||||||||||||||||| ||| ||| ||||||| | ||||||||| | |||| || | ||  ||||||||||||||  |  ||| ||    
T  4558794 tatatgaaaataatttaactttattttatcttttattatagaaatagcttatacataaacacttacataataaacgtttatgctataagcgcgtaattaa 4558695  T
Q  129 gtttttaatgcaaacaagacc 149  Q
    ||| || || |||||||||||    
T  4558694 gttgtttatccaaacaagacc 4558674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 11119090 - 11119194
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaagtttttaatgcaaacaa 145  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||  |||||||| | ||  |||||||||||  ||| ||| ||||| || || |||||||    
T  11119090 actttattttatcttttgttatagaaatatcgtatacataagcgattatatgatatgtagttatgctataaacacttaatcaagttgtttatccaaacaa 11119189  T
Q  146 gacct 150  Q
     ||||    
T  11119190 aacct 11119194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 14482192 - 14482129
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||| ||||||||||||| ||||||| |||||||   ||||||||||| |||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatga 14482129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 35374433 - 35374476
Alignment:
Q  15 atcagtttacagcttatatgaaaacaatttaactttattttatc 58  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  35374433 atcagattatagcttatatgaaaacaatttaactttattttatc 35374476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 40280281 - 40280348
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||||||||| ||||||||||||| ||||||  ||||||||| |||| ||| || |||||||||    
T  40280281 tatgaaaacaattttactttattttatcttttgttgtagaaataacttatatataggcacttatatga 40280348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 42597394 - 42597339
Alignment:
Q  32 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||| | ||||||||||    
T  42597394 atgaaaacaattttactttattttatcttttgttatagaaatagcttatacataag 42597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 26215493 - 26215427
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||| ||||| | ||||||||||||||||| ||||||| ||||||| | ||||||||||| |||||    
T  26215493 ttatacgaaaatagtttaactttattttatcttttgttatagaaatagcttatacataagcgcttat 26215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 787168 - 787269
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    ||||||| ||||||||||| |||||||| ||||||||||||| | |||||  |||| | | || |||||||| |||| |||| ||   ||||||||||||    
T  787168 cagtttatagcttatatgataacaatttgactttattttatcttatgttacggaaacagcttaaacataagcacttagatgataaacatttatgctataa 787267  T
Q  117 gt 118  Q
    ||    
T  787268 gt 787269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 8536123 - 8536237
Alignment:
Q  29 tatatgaaaacaatttaacttta-ttttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatga 127  Q
    |||||||||||||||| |||| | ||||||  ||||||| ||||||| | ||||||||||| |||||||||||||  || ||| |||||| ||| ||| |    
T  8536123 tatatgaaaacaatttgacttcacttttat--tttgttatagaaatagcttatacataagcacttatatgacaagcattcatggtataagcactcaatta 8536220  T
Q  128 agtttttaatgcaaaca 144  Q
    |||| || || ||||||    
T  8536221 agttgtttatccaaaca 8536237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 14280471 - 14280540
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||||||||||||||||| || |||||||| |||| || |||||||   ||||||||||| |||||    
T  14280471 agcttatatgaaaacaatttaatttaattttatcttttgctatagaaataggttatacataagcgcttat 14280540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 32976407 - 32976358
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 84  Q
    ||||| |||||||||||||||||| ||||||| ||||||| |||||||||    
T  32976407 aaaactatttaactttattttatcttttgttatagaaatagcgtatacat 32976358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 12972856 - 12972764
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||| |||||| || ||||| ||||||| ||| | |||||  |||||| | ||||||||||| ||||||||| || || ||||||||||||    
T  12972856 agcttacatgaaaccagtttaattttatttcatcttctgttattgaaatagcttatacataagcacttatatgataaatgcttatgctataag 12972764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 21653072 - 21653012
Alignment:
Q  34 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||| |||||||||||||||||||| ||||||| | ||||| | ||||||||||| |||||    
T  21653072 gaaatcaatttaactttattttatcttttgttacataaatagcctatacataagcgcttat 21653012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 8909056 - 8909009
Alignment:
Q  19 gtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    ||||| |||||||||||||||||||||||| |||| |||| |||||||    
T  8909056 gtttatagcttatatgaaaacaatttaactatattatatcttttgtta 8909009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 16210956 - 16211015
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 84  Q
    |||||||||||||||||| ||||||||||||||| |||  || ||||||| | |||||||    
T  16210956 agcttatatgaaaacaatgtaactttattttatcatttactatagaaatagcttatacat 16211015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 27119984 - 27120027
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaata 74  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||    
T  27119984 tatgaaaacagtttaactttatgttatcgtttgttatagaaata 27120027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 29262934 - 29262977
Alignment:
Q  15 atcagtttacagcttatatgaaaacaatttaactttattttatc 58  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||    
T  29262934 atcagcttacagcttatatgaaaataatttgactttattttatc 29262977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 37152970 - 37153029
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    |||||||||||||||||||||||  ||||||| |||||||   ||||||||||| |||||    
T  37152970 aaaacaatttaactttattttatactttgttatagaaatatattatacataagcgcttat 37153029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 44168556 - 44168517
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgtta 66  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  44168556 cttatatgaaaacaaattaactttattttatcttttgtta 44168517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 3936849 - 3936787
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    |||||||| ||| |||||||| |||||||||||| ||||||| |||||||   ||||||||||    
T  3936849 agcttataggaagacaatttagctttattttatcctttgttatagaaatagattatacataag 3936787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 12361192 - 12361130
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 87  Q
    |||||||||||||||||||| |||| |||||||| ||  ||| ||||||||| |||| |||||    
T  12361192 agcttatatgaaaacaatttgacttcattttatctttatttatagaaataacttatatataag 12361130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 30627983 - 30628045
Alignment:
Q  36 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    ||||||||| | ||||||||||| ||||||| ||||||| | |||||| | ||||||||||||    
T  30627983 aaacaattttattttattttatcttttgttacagaaatagcttatacaaatgcccttatatga 30628045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 40356850 - 40356788
Alignment:
Q  46 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgttta 108  Q
    ||||||||||||| ||| ||| | ||||| | |||| |||||| |||||||||||||||||||    
T  40356850 actttattttatcttttattatataaatagcttatagataagcacttatatgacaagtgttta 40356788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 7646214 - 7646145
Alignment:
Q  17 cagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 86  Q
    ||||||| || |||||  |||||||||||||||||||||| | ||| ||| ||||||| | |||||||||    
T  7646214 cagtttatagattatacaaaaacaatttaactttattttaccttttcttatagaaatagcttatacataa 7646145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 11188248 - 11188297
Alignment:
Q  48 tttattttatcgtttgttagagaaataacgtatacataagcccttatatg 97  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||| ||||||||    
T  11188248 tttattttatcttttgttatagaaacaacttatacataagcacttatatg 11188297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 26716518 - 26716596
Alignment:
Q  35 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 115  Q
    |||| ||||| ||||||||| |||  |||||| |||| || | ||||||||||| ||||||| | ||||||||||||||||    
T  26716518 aaaataatttgactttatttaatc--ttgttatagaagtagcttatacataagcacttatataataagtgtttatgctata 26716596  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 35453695 - 35453784
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 116  Q
    |||||||||||  | ||||||||||||||||| ||||||  ||||| |   |||| |||||  ||||||||||||| | |||||||||||    
T  35453695 cttatatgaaactagtttaactttattttatcttttgttgtagaaacagattatatataagtacttatatgacaagcgcttatgctataa 35453784  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 41620365 - 41620434
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 98  Q
    |||||||| | ||||| ||||||||||||| ||||||| | ||||||| |||| |||||| ||| |||||    
T  41620365 tatatgaacataatttgactttattttatcttttgttacaaaaataacttatatataagcacttgtatga 41620434  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 3537101 - 3537149
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaat 73  Q
    |||||||| ||||||||||| ||||||||||||| |||| || ||||||    
T  3537101 agcttatacgaaaacaatttgactttattttatcttttgctatagaaat 3537149  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 7878547 - 7878587
Alignment:
Q  16 tcagtttacagcttatatgaaaacaatttaactttatttta 56  Q
    |||| ||| |||||||||||||||||||| |||||||||||    
T  7878547 tcagcttatagcttatatgaaaacaatttgactttatttta 7878587  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 35869837 - 35869745
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    ||||||||||||||   ||| | ||||||||||  ||||||  ||||||  | ||||||||||  ||||||||| ||||| ||||||||||||    
T  35869837 agcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataag 35869745  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 41475133 - 41475213
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaagtgttt 107  Q
    ||||| ||||||||||||||| ||||||||| |||| || | || || | ||||||||||  ||||| |||||||||||||    
T  41475133 ttatacgaaaacaatttaactgtattttatcttttgctataaaattagcttatacataagtgcttatcatgacaagtgttt 41475213  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 44617861 - 44617950
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    |||||||||||||| | |||||  |||||||  || |||| ||||||| | ||||||||| |  |||||| ||||||||||| |||||||||    
T  44617861 cttatatgaaaacagtctaact--attttatttttagttatagaaatagcttatacataaactgttatataacaagtgtttaagctataagt 44617950  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 51563 - 51508
Alignment:
Q  30 atatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 85  Q
    ||||||||||||||||||||||||||||  ||||||| | ||||||| ||||||||    
T  51563 atatgaaaacaatttaactttattttatattttgttataaaaataacttatacata 51508  T

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Target: scaffold0508 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 9847 - 9937
Alignment:
Q  27 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 117  Q
    |||||||||||||  ||| |||| |||||||  ||||||| ||||||||| ||||||||||| | ||||||| |||  ||||| |||||||    
T  9847 cttatatgaaaactttttgacttaattttattttttgttatagaaataacttatacataagcacctatatgataagcatttattctataag 9937  T

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Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 42616 - 42524
Alignment:
Q  25 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 118  Q
    ||||||||||||| ||  || ||| ||||||||| ||||||| |||||| || ||||||||||| ||||||||| || ||| | ||||||||||    
T  42616 agcttatatgaaa-caggtttactctattttatcttttgttatagaaatgacttatacataagcacttatatgataaatgtgtctgctataagt 42524  T

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Target: scaffold0549 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 1798 - 1866
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 97  Q
    |||||||||| || |||||||||||||||| ||||||| |||| || | |||| |||||| ||||||||    
T  1798 tatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttatatg 1866  T

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Target: scaffold0549; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 3888 - 3956
Alignment:
Q  29 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 97  Q
    |||||||||| || |||||||||||||||| ||||||| |||| || | |||| |||||| ||||||||    
T  3888 tatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttatatg 3956  T

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Target: scaffold0654 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 6713 - 6791
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttat 109  Q
    |||||||||||||| |||| | |||||  ||||||| |||||||   ||||||||||| ||||||||| ||||| ||||    
T  6713 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttat 6791  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 20292 - 20226
Alignment:
Q  28 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 94  Q
    ||||||||||||||||| || |||||||||  ||| ||| ||||||||| |||||||| || |||||    
T  20292 ttatatgaaaacaatttgacattattttatgttttattaaagaaataacttatacatacgcacttat 20226  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 116632 - 116710
Alignment:
Q  31 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttat 109  Q
    |||||||||||||| |||| | |||||  ||||||| |||||||   ||||||||||| ||||||||| ||||| ||||    
T  116632 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttat 116710  T

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