View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11137_high_35 (Length: 302)
Name: NF11137_high_35
Description: NF11137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11137_high_35 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 10 - 295
Target Start/End: Complemental strand, 3733066 - 3732781
Alignment:
| Q |
10 |
gcacagattaggaagattgtgacttctgaaattgagtgcaaatctctcaagattgagaggtctcaaaaagttaccggaaaagtgtgcataagatatcatc |
109 |
Q |
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| T |
3733066 |
gcacagattaggaagattgtgacttctgaaattgagtgcaaatctctcaagattgagaggtctcaaaaagttaccggaaaagtgtgcataagatatcatc |
3732967 |
T |
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| Q |
110 |
ggctcatagataaaacgaatatatggtacatgttaatattgtgacactactattttagccacgccaaaacattagttcaggtagattcaaaatagttttg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3732966 |
ggctcatagataaaacgaatatatggtacatgttaatattgtgacactactattttagccacgccaaaacattagttcaggtagattcaaaatagttttg |
3732867 |
T |
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| Q |
210 |
aagaaatctttcatgaatacaagttgagtttacctagttcaaatctaactgttttatttcaacaacaaaataatatctaattacaa |
295 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3732866 |
aagaaatctttcatgaatacaagttgagcttacctagttcaaatctaactgttttatttcaacaacaaaataatatctaattacaa |
3732781 |
T |
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