View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11137_low_14 (Length: 467)
Name: NF11137_low_14
Description: NF11137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11137_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 445; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 1 - 449
Target Start/End: Complemental strand, 48121090 - 48120642
Alignment:
| Q |
1 |
gccaatagcagtagaaatttccctggaagaacatacaggttttacaatgggaaatccctctatgaatttggctatggattaagctactccacattctcca |
100 |
Q |
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| T |
48121090 |
gccaatagcagtagaaatttccctggaagaacatacaggttttacaatgggaaatccctctatgaatttggctatggattaagctactccacattctcca |
48120991 |
T |
|
| Q |
101 |
cccacatagcatctgctccttccaccataatgatccagaaaaacacatccatttcaaaaccacttaataatatcttccttgatgatcaagtaattgatat |
200 |
Q |
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| T |
48120990 |
cccacatagcatctgctccttccaccataatgctccagaaaaacacatccatttcaaaaccacttaataatatcttccttgatgatcaagtaattgatat |
48120891 |
T |
|
| Q |
201 |
ctccaccataagttgtttcaatttgacattttcgcttgtgattggtgtgaagaacaatggaccttttgatggatctcatgtggtgttagtgtttttggag |
300 |
Q |
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| T |
48120890 |
ctccaccataagttgtttcaatttgacattttcgcttgtgattggtgtgaagaacaatggaccttttgatggatctcatgtggtgttagtgtttttggag |
48120791 |
T |
|
| Q |
301 |
ccaccaagttcagaggcagtgagtggtgttccattgaaacaattgataggatttgaaagagcacaagttaaggttgggaagacagagtttgtgacagtaa |
400 |
Q |
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| T |
48120790 |
ccaccaagttcagaggcagtgagtggtgttccattgaaacaattgataggatttgaaagagcacaagttaaggttgggaagacagagtttgtgacagtaa |
48120691 |
T |
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| Q |
401 |
aaattgatatatgcaaaatgctaagtaatgttgatagtgatggtaaaag |
449 |
Q |
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| T |
48120690 |
aaattgatatatgcaaaatgctaagtaatgttgatagtgatggtaaaag |
48120642 |
T |
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