View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11137_low_29 (Length: 348)

Name: NF11137_low_29
Description: NF11137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11137_low_29
NF11137_low_29
[»] chr6 (32 HSPs)
chr6 (21-330)||(33330018-33330326)
chr6 (21-330)||(33335515-33335823)
chr6 (21-330)||(16838948-16839245)
chr6 (22-330)||(6005621-6005920)
chr6 (15-330)||(5343681-5343985)
chr6 (21-330)||(28155156-28155454)
chr6 (21-330)||(6438701-6438998)
chr6 (29-223)||(14737159-14737353)
chr6 (29-223)||(14742019-14742213)
chr6 (29-219)||(22010282-22010472)
chr6 (29-218)||(11857286-11857474)
chr6 (29-121)||(5266487-5266579)
chr6 (44-222)||(5674338-5674515)
chr6 (29-103)||(30125111-30125185)
chr6 (43-120)||(6136363-6136440)
chr6 (44-120)||(33342503-33342580)
chr6 (44-120)||(6026942-6027018)
chr6 (44-120)||(22709460-22709536)
chr6 (41-120)||(16578917-16578996)
chr6 (41-120)||(16616384-16616463)
chr6 (44-120)||(13150957-13151034)
chr6 (44-120)||(34164552-34164629)
chr6 (44-120)||(34166774-34166851)
chr6 (44-120)||(25420905-25420981)
chr6 (41-120)||(16554559-16554638)
chr6 (41-120)||(16631115-16631194)
chr6 (44-98)||(2171941-2171995)
chr6 (44-213)||(3073065-3073234)
chr6 (41-120)||(27647573-27647652)
chr6 (44-121)||(411794-411872)
chr6 (44-98)||(5757060-5757114)
chr6 (44-98)||(23896794-23896848)
[»] chr1 (18 HSPs)
chr1 (11-330)||(43988024-43988343)
chr1 (21-330)||(25439484-25439780)
chr1 (21-330)||(25444677-25444973)
chr1 (21-330)||(39445700-39445997)
chr1 (21-330)||(44023462-44023758)
chr1 (21-330)||(1054599-1054896)
chr1 (29-219)||(41390903-41391093)
chr1 (29-219)||(41398558-41398748)
chr1 (29-219)||(24786918-24787107)
chr1 (29-211)||(24793740-24793921)
chr1 (44-120)||(44203326-44203402)
chr1 (44-213)||(9986894-9987063)
chr1 (44-121)||(20622635-20622712)
chr1 (44-98)||(19361021-19361075)
chr1 (44-98)||(19365877-19365931)
chr1 (44-121)||(51765099-51765176)
chr1 (65-225)||(24202360-24202521)
chr1 (44-121)||(21053648-21053726)
[»] chr3 (36 HSPs)
chr3 (23-330)||(2672506-2672812)
chr3 (23-330)||(2676662-2676968)
chr3 (27-330)||(18656635-18656937)
chr3 (15-330)||(24968311-24968625)
chr3 (15-330)||(8512421-8512748)
chr3 (15-330)||(8517301-8517628)
chr3 (15-330)||(32475688-32475992)
chr3 (15-330)||(32480546-32480850)
chr3 (29-219)||(28503412-28503602)
chr3 (29-175)||(22172755-22172900)
chr3 (44-219)||(28501260-28501435)
chr3 (29-213)||(40372349-40372532)
chr3 (29-213)||(7167606-7167789)
chr3 (29-219)||(8738616-8738805)
chr3 (29-219)||(9090854-9091043)
chr3 (44-181)||(27352189-27352325)
chr3 (29-221)||(8477717-8477909)
chr3 (29-121)||(2671158-2671250)
chr3 (41-120)||(54634815-54634894)
chr3 (44-120)||(4598922-4598999)
chr3 (44-120)||(4601143-4601220)
chr3 (44-120)||(10208886-10208963)
chr3 (44-120)||(25637121-25637197)
chr3 (41-120)||(6716190-6716269)
chr3 (41-120)||(6718374-6718453)
chr3 (44-98)||(1306441-1306495)
chr3 (44-120)||(10055913-10055990)
chr3 (44-120)||(10058135-10058212)
chr3 (44-120)||(10060357-10060434)
chr3 (44-120)||(10062579-10062656)
chr3 (44-120)||(10064801-10064878)
chr3 (44-120)||(10067023-10067100)
chr3 (44-120)||(10211086-10211163)
chr3 (41-120)||(45282671-45282750)
chr3 (140-213)||(7782455-7782525)
chr3 (44-120)||(800794-800870)
[»] chr5 (39 HSPs)
chr5 (21-330)||(33791520-33791818)
chr5 (21-330)||(2785579-2785877)
chr5 (21-330)||(33768388-33768686)
chr5 (13-330)||(31396567-31396872)
chr5 (13-330)||(31401424-31401729)
chr5 (21-330)||(28807161-28807458)
chr5 (44-330)||(37561055-37561329)
chr5 (44-330)||(37556233-37556507)
chr5 (29-219)||(15044997-15045187)
chr5 (44-218)||(1456746-1456920)
chr5 (29-217)||(31180568-31180756)
chr5 (29-218)||(27445285-27445473)
chr5 (29-218)||(27450128-27450316)
chr5 (29-211)||(43599043-43599224)
chr5 (29-211)||(43604535-43604716)
chr5 (29-211)||(43610027-43610208)
chr5 (29-218)||(43592591-43592779)
chr5 (29-122)||(30631762-30631855)
chr5 (44-222)||(24136198-24136375)
chr5 (29-114)||(29402643-29402728)
chr5 (44-120)||(25077814-25077890)
chr5 (44-120)||(25135783-25135859)
chr5 (41-120)||(10592948-10593027)
chr5 (41-120)||(22536668-22536747)
chr5 (44-120)||(26177575-26177651)
chr5 (44-120)||(38219845-38219921)
chr5 (65-219)||(29751461-29751615)
chr5 (44-120)||(9789624-9789700)
chr5 (44-120)||(18442048-18442124)
chr5 (41-120)||(16544099-16544178)
chr5 (41-120)||(16546321-16546400)
chr5 (41-120)||(40379783-40379862)
chr5 (41-120)||(40381994-40382073)
chr5 (44-98)||(9352916-9352970)
chr5 (44-121)||(29720074-29720152)
chr5 (136-213)||(10593044-10593119)
chr5 (44-120)||(16407750-16407826)
chr5 (44-120)||(16409186-16409262)
chr5 (44-120)||(26170466-26170542)
[»] scaffold0197 (2 HSPs)
scaffold0197 (13-330)||(18741-19046)
scaffold0197 (15-330)||(13863-14190)
[»] chr8 (25 HSPs)
chr8 (21-330)||(35745595-35745893)
chr8 (29-330)||(10683832-10684145)
chr8 (21-330)||(39784410-39784707)
chr8 (29-219)||(25327757-25327947)
chr8 (29-219)||(6311652-6311842)
chr8 (29-219)||(7289521-7289711)
chr8 (29-219)||(10688692-10688882)
chr8 (29-219)||(18852720-18852909)
chr8 (29-219)||(18870114-18870303)
chr8 (29-211)||(30656008-30656189)
chr8 (29-212)||(4759627-4759809)
chr8 (29-211)||(36979741-36979921)
chr8 (44-219)||(1261523-1261699)
chr8 (29-121)||(33037380-33037472)
chr8 (245-330)||(25327952-25328036)
chr8 (245-330)||(25328078-25328162)
chr8 (41-120)||(3439193-3439271)
chr8 (41-120)||(25689646-25689725)
chr8 (44-120)||(42575724-42575801)
chr8 (44-119)||(15290251-15290327)
chr8 (44-119)||(15470620-15470696)
chr8 (44-120)||(2627427-2627503)
chr8 (44-120)||(26288332-26288408)
chr8 (44-120)||(26301589-26301665)
chr8 (44-120)||(26313583-26313659)
[»] chr2 (15 HSPs)
chr2 (21-330)||(19344626-19344924)
chr2 (21-330)||(19349484-19349782)
chr2 (65-330)||(32246989-32247244)
chr2 (27-219)||(39811568-39811760)
chr2 (29-222)||(9295955-9296147)
chr2 (29-213)||(14291849-14292032)
chr2 (29-213)||(11098480-11098663)
chr2 (44-120)||(12647783-12647859)
chr2 (44-98)||(3492214-3492268)
chr2 (44-120)||(25410081-25410157)
chr2 (44-98)||(30833030-30833084)
chr2 (21-58)||(32247230-32247267)
chr2 (44-120)||(4484738-4484814)
chr2 (44-98)||(28258759-28258813)
chr2 (44-120)||(32289257-32289333)
[»] scaffold0259 (1 HSPs)
scaffold0259 (15-330)||(1818-2132)
[»] scaffold0028 (1 HSPs)
scaffold0028 (15-330)||(148523-148837)
[»] chr7 (30 HSPs)
chr7 (15-330)||(24265756-24266083)
chr7 (15-327)||(16880280-16880581)
chr7 (15-330)||(16885133-16885436)
chr7 (15-330)||(24260900-24261204)
chr7 (41-328)||(21811844-21812119)
chr7 (29-219)||(24023912-24024100)
chr7 (28-330)||(31109163-31109467)
chr7 (29-219)||(4873438-4873628)
chr7 (44-195)||(12406598-12406749)
chr7 (56-218)||(12397223-12397385)
chr7 (29-213)||(2058329-2058512)
chr7 (29-121)||(21640238-21640330)
chr7 (249-328)||(19992517-19992595)
chr7 (29-122)||(20357121-20357214)
chr7 (44-219)||(24789535-24789709)
chr7 (44-210)||(1533012-1533177)
chr7 (44-120)||(6592737-6592813)
chr7 (44-120)||(6594953-6595029)
chr7 (44-120)||(18414090-18414166)
chr7 (32-120)||(20343596-20343684)
chr7 (44-213)||(21646365-21646534)
chr7 (44-120)||(32060704-32060780)
chr7 (44-120)||(1562403-1562479)
chr7 (44-120)||(18409214-18409290)
chr7 (44-120)||(43504536-43504612)
chr7 (44-120)||(48408507-48408583)
chr7 (44-120)||(25767361-25767437)
chr7 (44-120)||(39731042-39731118)
chr7 (41-120)||(18389160-18389239)
chr7 (41-120)||(18392596-18392675)
[»] scaffold0009 (1 HSPs)
scaffold0009 (15-330)||(176529-176858)
[»] chr4 (23 HSPs)
chr4 (12-330)||(45347393-45347700)
chr4 (21-330)||(45356883-45357180)
chr4 (27-330)||(5732865-5733155)
chr4 (21-330)||(18855927-18856224)
chr4 (27-330)||(3814224-3814514)
chr4 (30-219)||(9228780-9228969)
chr4 (29-219)||(18712348-18712538)
chr4 (29-219)||(9223992-9224182)
chr4 (42-219)||(56141618-56141795)
chr4 (29-213)||(24742301-24742484)
chr4 (29-218)||(51520769-51520957)
chr4 (29-121)||(29761073-29761165)
chr4 (44-120)||(7122375-7122451)
chr4 (44-120)||(7124597-7124673)
chr4 (44-120)||(8393090-8393166)
chr4 (44-120)||(28468086-28468162)
chr4 (44-222)||(13992592-13992770)
chr4 (44-120)||(8395299-8395375)
chr4 (44-120)||(5135757-5135834)
chr4 (44-120)||(5137983-5138060)
chr4 (44-120)||(31495717-31495793)
chr4 (159-213)||(29761001-29761055)
chr4 (21-54)||(18860403-18860436)
[»] scaffold0464 (1 HSPs)
scaffold0464 (21-330)||(563-860)
[»] scaffold0355 (1 HSPs)
scaffold0355 (44-218)||(3445-3619)
[»] scaffold0135 (1 HSPs)
scaffold0135 (44-219)||(34662-34837)
[»] scaffold0665 (1 HSPs)
scaffold0665 (29-137)||(8091-8199)
[»] scaffold0674 (1 HSPs)
scaffold0674 (44-120)||(4126-4202)
[»] scaffold0286 (1 HSPs)
scaffold0286 (29-120)||(22033-22124)
[»] scaffold0565 (1 HSPs)
scaffold0565 (44-120)||(3001-3077)
[»] scaffold0188 (1 HSPs)
scaffold0188 (44-120)||(17540-17616)
[»] scaffold0491 (2 HSPs)
scaffold0491 (44-120)||(11569-11644)
scaffold0491 (60-120)||(9124-9184)
[»] scaffold0510 (1 HSPs)
scaffold0510 (44-98)||(1192-1246)


Alignment Details
Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 33330018 - 33330326
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33330018 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 33330117  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  33330118 aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttga 33330217  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
    ||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330218 agacaaccttaagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 33330316  T
Q  321 aggttgggaa 330  Q
    ||||||||||    
T  33330317 aggttgggaa 33330326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 33335515 - 33335823
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33335515 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 33335614  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||     
T  33335615 aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcatgtgcttttttga 33335714  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
    ||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33335715 agacaaccttaagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 33335813  T
Q  321 aggttgggaa 330  Q
    ||||||||||    
T  33335814 aggttgggaa 33335823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 16839245 - 16838948
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16839245 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 16839146  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  16839145 aaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttttttgg 16839046  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
    |||||           ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  16839045 agaga-----------accttgagagagcttaagaga-gaaaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtgtatctt 16838958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 22 - 330
Target Start/End: Complemental strand, 6005920 - 6005621
Alignment:
Q  22 tgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6005920 tgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 6005821  T
Q  122 acttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgga 221  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |     
T  6005820 acctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgctttttttg- 6005722  T
Q  222 gagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
             || | |||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6005721 --------gaaaaaaaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttctt 6005631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 330
Target Start/End: Complemental strand, 5343985 - 5343681
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||| |||||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5343985 gaggaagtgagccaagtcttctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 5343886  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||      
T  5343885 ctggtcaacttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggctggactagtatataaagtgttcttgtgctc 5343786  T
Q  215 ttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 314  Q
     |||| ||          |  |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  5343785 atttgaag----------gttaaccttgagagaacttaagaga-gaaaacttggatatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 5343697  T
Q  315 tttcttaggttgggaa 330  Q
      ||||||||||||||    
T  5343696 aatcttaggttgggaa 5343681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 28155156 - 28155454
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  28155156 gtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtc 28155255  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||  |||||||||||| ||||||     
T  28155256 aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttg- 28155354  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              || | |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  28155355 ---------aaaaaaaaccttaagagaacttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttctt 28155444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 6438998 - 6438701
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  6438998 gtgagccaagtttgctggatgcataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc 6438899  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||  |||||||||||| ||||||     
T  6438898 aacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggaaggactagtatatattgtgttcttgtgcttttttg- 6438800  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  6438799 ----------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttctt 6438711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 14737159 - 14737353
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  14737159 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 14737258  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggaga 223  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||||||    
T  14737259 gtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttggaga 14737353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 14742019 - 14742213
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  14742019 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 14742118  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggaga 223  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||||||    
T  14742119 gtccgttgcagatcgtgacacgatctaaggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttggaga 14742213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 22010282 - 22010472
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||    
T  22010282 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgg 22010381  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||||| |   ||||||||| ||  |||||||||||| ||||||    
T  22010382 gtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagagggagactagtatatattgtgttcttgtgcttttttg 22010472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 11857474 - 11857286
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || | |||||||||||| |||||| | ||    
T  11857474 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtcaaccttgg 11857375  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 218  Q
    | |||||||| ||||||||||||| | |||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| |||||    
T  11857374 gtccgttgcaaatcgtgacacgat-ttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgctttttt 11857286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 5266579 - 5266487
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 121  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||  ||||||||||||||||    
T  5266579 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtca 5266487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 44 - 222
Target Start/End: Original strand, 5674338 - 5674515
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 142  Q
    |||||||| ||| ||||||||||||||||||||||||  |||||||||| ||||| ||||  |||||||||||||||| || | |||||    ||| |||    
T  5674338 aaatcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaatc 5674437  T
Q  143 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 222  Q
    ||||||||||||  |||||||||| |||||||   |||| | | | |||||||||||||||||||||||||  |||||||    
T  5674438 gtgacacgatct--ggaaatcgtgacacgattgtatcagaggaaggctagtatttaaagtgttcttgtgcagatttggag 5674515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 30125111 - 30125185
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatc 103  Q
    ||||||| ||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  30125111 agtttgcaggacgccaaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 6136440 - 6136363
Alignment:
Q  43 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  6136440 aaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6136363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 33342580 - 33342503
Alignment:
Q  44 aaatcgtggcacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | |||||||||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  33342580 aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 33342503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 6026942 - 6027018
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||| ||||    
T  6026942 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtc 6027018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 22709536 - 22709460
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  22709536 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtc 22709460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 16578996 - 16578917
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16578996 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16578917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 16616384 - 16616463
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16616384 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16616463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 13150957 - 13151034
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  13150957 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 13151034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 34164552 - 34164629
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  34164552 aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34164629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 34166774 - 34166851
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  34166774 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34166851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 25420905 - 25420981
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  25420905 aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25420981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 16554559 - 16554638
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||| |||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16554559 gcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16554638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 16631115 - 16631194
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||| |||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16631115 gcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16631194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 2171995 - 2171941
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| |||||    
T  2171995 aaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaa 2171941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 3073234 - 3073065
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgca--ga 140  Q
    |||||||| ||||||  | ||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||| || | ||||  | ||||   |    
T  3073234 aaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggatggatgcactaa 3073135  T
Q  141 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    |||| |||||||||  |||||||||| ||||||||  |||| | ||| ||||||||| |||||||||||||||    
T  3073134 tcgttacacgatct--ggaaatcgtgacacgattttatcagtggagggctagtattt-aagtgttcttgtgca 3073065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 27647573 - 27647652
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||||  || ||||||||||||||||   |||||||||| ||||| ||||  |||||  ||||||||    
T  27647573 gcaaaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtc 27647652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 411794 - 411872
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaactatctctgataaggactggtca 121  Q
    |||||||| ||||||  ||||||||||||||||||||  | ||||||||| ||||| | ||  ||||||||||||||||    
T  411794 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 411872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 5757060 - 5757114
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    ||||||||| ||||| ||| |||||||||||||||||   |||||||||||||||    
T  5757060 aaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaa 5757114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 23896848 - 23896794
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    ||||||||| ||||| ||| |||||||||||||||||   |||||||||||||||    
T  23896848 aaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaa 23896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 277; Significance: 1e-155; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 330
Target Start/End: Original strand, 43988024 - 43988343
Alignment:
Q  11 cagagaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgata 110  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  43988024 cagagaggcagtgagccaagtttgctggaagcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgata 43988123  T
Q  111 aggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgt 210  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43988124 aggactggtcaacttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgctcttgt 43988223  T
Q  211 gca-tttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatga 309  Q
    ||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43988224 gcattttttggagataaccttaagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatga 43988322  T
Q  310 gagtgtttcttaggttgggaa 330  Q
    |||||||||||||||||||||    
T  43988323 gagtgtttcttaggttgggaa 43988343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 25439484 - 25439780
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  25439484 gtgagccaagtttgcaggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtc 25439583  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||     
T  25439584 aacctggggactgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc-tttttg- 25439681  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  25439682 ----------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttctt 25439770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 25444677 - 25444973
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  25444677 gtgagccaagtttgtaggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc 25444776  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||     
T  25444777 aacctagggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc-tttttg- 25444874  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  25444875 ----------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttctt 25444963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 39445997 - 39445700
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||| ||||||||||||||||    
T  39445997 gtgagccaagtttgcaggacgccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtc 39445898  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||     
T  39445897 aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttg- 39445799  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  39445798 ----------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttctt 39445710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 44023462 - 44023758
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  44023462 gtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 44023561  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||  |||||||||||| ||||||     
T  44023562 aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactggtatatattgtgttcttgtgc-tttttg- 44023659  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              | || |||||| ||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  44023660 ----------aggataaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttctt 44023748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 1054599 - 1054896
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  1054599 gtgagccaagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc 1054698  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||  |||||||||||| ||||||     
T  1054699 aacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttg- 1054797  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  1054798 ----------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttctt 1054886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 219
Target Start/End: Complemental strand, 41391093 - 41390903
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||| ||||||||||||||||||| ||||    
T  41391093 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggg 41390994  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  41390993 gtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 41390903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 29 - 219
Target Start/End: Complemental strand, 41398748 - 41398558
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||  |||||||||||||||||| ||||    
T  41398748 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcattgataaggactggtcaacctggg 41398649  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  41398648 gtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 41398558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 24786918 - 24787107
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc-aacttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||| | |    
T  24786918 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttg 24787017  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    || | |  ||| |||||||||||||||  |||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||||    
T  24787018 ggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttg 24787107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 211
Target Start/End: Original strand, 24793740 - 24793921
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc-aacttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||| | |    
T  24793740 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttg 24793839  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 211  Q
    || | |  ||| |||||||||||||||  |||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||    
T  24793840 ggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 44203326 - 44203402
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  44203326 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 44203402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 213
Target Start/End: Original strand, 9986894 - 9987063
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgca--ga 140  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | ||  | |||||||||||||| || | ||||| | ||||   |    
T  9986894 aaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttgggacggatgcaccaa 9986993  T
Q  141 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    ||||||||||||||  |||||||||| ||| ||||  |||| | ||| ||||||||| |||||||||||||||    
T  9986994 tcgtgacacgatct--ggaaatcgtgacacaattttatcagtggagggctagtattt-aagtgttcttgtgca 9987063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 20622712 - 20622635
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 121  Q
    |||||||| ||||||  ||||||||||||||||||||  |||||||||| ||||| ||||  ||||||||||||||||    
T  20622712 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtca 20622635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 19361021 - 19361075
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| |||||    
T  19361021 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 19361075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 19365877 - 19365931
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| |||||    
T  19365877 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 19365931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 51765099 - 51765176
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 121  Q
    |||||||| |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  ||||||||||||||||    
T  51765099 aaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtca 51765176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 225
Target Start/End: Original strand, 24202360 - 24202521
Alignment:
Q  65 aaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc--aacttggg--gaccgttgcagatcgtgacacgatctagggaa 160  Q
    ||||||||||||||||   ||||||||| ||||| ||||  |||||||||||||||  | ||||||  |  |||| || |||||||||||||||  ||||    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgtt-caaatcgtgacacgatct--ggaa 24202456  T
Q  161 atcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat-ttttggagaga 225  Q
    |||||| |||||||   |||| | | | ||||||||| |||||||||||||||| |||||||||||    
T  24202457 atcgtgacacgattgtatcagaggaaggctagtattt-aagtgttcttgtgcatattttggagaga 24202521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 21053648 - 21053726
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaactatctctgataaggactggtca 121  Q
    |||||||| ||||||  ||||||||||||||||||||  | ||||||||| ||||| | ||  ||||||||||||||||    
T  21053648 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 21053726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 23 - 330
Target Start/End: Original strand, 2672506 - 2672812
Alignment:
Q  23 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 122  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2672506 gagccaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 2672605  T
Q  123 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 222  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  2672606 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaag 2672705  T
Q  223 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttag 322  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2672706 agaaccttaagacaaccttgagagaacttaagaga-gaaaacttggaggtcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttag 2672804  T
Q  323 gttgggaa 330  Q
    ||||||||    
T  2672805 gttgggaa 2672812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 23 - 330
Target Start/End: Original strand, 2676662 - 2676968
Alignment:
Q  23 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  2676662 gagccaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtcaa 2676761  T
Q  123 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 222  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  2676762 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaag 2676861  T
Q  223 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttag 322  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2676862 agaaccttaagacaaccttgagagaacttaagaga-gaaaacttggaggtcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttag 2676960  T
Q  323 gttgggaa 330  Q
    ||||||||    
T  2676961 gttgggaa 2676968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 27 - 330
Target Start/End: Complemental strand, 18656937 - 18656635
Alignment:
Q  27 caagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttg 126  Q
    ||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||    
T  18656937 caagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctg 18656838  T
Q  127 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaa 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||    
T  18656837 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagacaa 18656738  T
Q  227 cctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttg 326  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  18656737 ccttaagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttg 18656639  T
Q  327 ggaa 330  Q
    ||||    
T  18656638 ggaa 18656635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 15 - 330
Target Start/End: Complemental strand, 24968625 - 24968311
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  24968625 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataagga 24968526  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  24968525 ctggtcaacctggggaccgttgcaaatcgtgccacgatctagggaaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttcttgtgctt 24968426  T
Q  215 ttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 314  Q
     |||| |  |   || ||||||| ||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24968425 atttgaaagggggcttaagacaatcttgagagagctcaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 24968327  T
Q  315 tttcttaggttgggaa 330  Q
    | ||||||||||||||    
T  24968326 tatcttaggttgggaa 24968311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 330
Target Start/End: Complemental strand, 8512748 - 8512421
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8512748 gaggcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 8512649  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||      
T  8512648 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctc 8512549  T
Q  215 ttttg-------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcc 301  Q
    |||||             |||| ||||| ||||||||||||||||     |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  8512548 ttttgaaggtaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttcc 8512450  T
Q  302 tttgatgagagtgtttcttaggttgggaa 330  Q
    |||||||||||||| ||||||||||||||    
T  8512449 tttgatgagagtgtatcttaggttgggaa 8512421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 330
Target Start/End: Complemental strand, 8517628 - 8517301
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8517628 gaggcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 8517529  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||      
T  8517528 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctc 8517429  T
Q  215 ttttg-------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcc 301  Q
    |||||             |||| ||||| ||||||||||||||||     |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  8517428 ttttgaaggtaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttcc 8517330  T
Q  302 tttgatgagagtgtttcttaggttgggaa 330  Q
    |||||||||||||| ||||||||||||||    
T  8517329 tttgatgagagtgtatcttaggttgggaa 8517301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 330
Target Start/End: Complemental strand, 32475992 - 32475688
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    ||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32475992 gaggcagtgagccaagttctctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 32475893  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||      
T  32475892 ctggtcatcttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctc 32475793  T
Q  215 ttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 314  Q
     |||| ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32475792 atttgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 32475704  T
Q  315 tttcttaggttgggaa 330  Q
      ||||||||||||||    
T  32475703 aatcttaggttgggaa 32475688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 15 - 330
Target Start/End: Complemental strand, 32480850 - 32480546
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    ||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32480850 gaggcagtgagccaagttctctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 32480751  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||      
T  32480750 ctggtcatcttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctaggcaggactagtatttaaagtgttcttgtgctc 32480651  T
Q  215 ttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 314  Q
     |||| ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32480650 atttgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 32480562  T
Q  315 tttcttaggttgggaa 330  Q
      ||||||||||||||    
T  32480561 aatcttaggttgggaa 32480546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 28503412 - 28503602
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  28503412 agtttgctggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgg 28503511  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | | |  ||| ||||||||||||||| ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||||    
T  28503512 gtcagacgcaaatcgtgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttg 28503602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 175
Target Start/End: Original strand, 22172755 - 22172900
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| | ||    
T  22172755 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtcaaccttgg 22172854  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgattt 175  Q
      |||||||| ||||||||||||| | ||||||||||||||||||||    
T  22172855 ttccgttgcaaatcgtgacacgat-ttgggaaatcgtggcacgattt 22172900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 219
Target Start/End: Original strand, 28501260 - 28501435
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||| | |  ||| |||     
T  28501260 aaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaatca 28501359  T
Q  144 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    ||||||||||| ||||||||||||||||||| |||||| | | ||||||||| ||  |||| ||||||| ||||||    
T  28501360 tgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgcttttttg 28501435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 40372349 - 40372532
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || |||    
T  40372349 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgg 40372448  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    | || |  ||| |||||| ||||||||  |||||||||| |||||||||||||| | | ||||||||| ||  |||||||||||||    
T  40372449 gaacggacgcaaatcgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgca 40372532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 7167789 - 7167606
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| || | |    
T  7167789 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttg 7167690  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    || | |  ||| ||||||||||||| |  | ||||| ||||||||||||||||| | | ||||||||| ||  |||||||||||||    
T  7167689 ggtcagacgcaaatcgtgacacgattt--gaaaatcatggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 7167606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 8738616 - 8738805
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  8738616 agtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 8738715  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | || |  ||| ||||||||| |||||  |||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||| ||||||    
T  8738716 gaacggacgcaaatcgtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttg 8738805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 9090854 - 9091043
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  9090854 agtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 9090953  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | || |  ||| ||||||||| |||||  |||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||| ||||||    
T  9090954 gaacggacgcaaatcgtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttg 9091043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 27352189 - 27352325
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| || | ||||| |  ||| |||    
T  27352189 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatc 27352288  T
Q  143 gtgacacgatctagggaaatcgtggcacgatttcttcag 181  Q
    |||||||||| |  |||||||||||||||||| ||||||    
T  27352289 gtgacacgattt--ggaaatcgtggcacgattgcttcag 27352325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 221
Target Start/End: Complemental strand, 8477909 - 8477717
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  8477909 agtttgctggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttg 8477810  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg--catttttgga 221  Q
    ||      ||| |||||||||||||||  |||||||||| ||||||| |||||| | | | ||||||||| |||||||||||||  ||||||||||    
T  8477809 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtgacacgattgcttcagaggaaggctagtattt-aagtgttcttgtgttcatttttgga 8477717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 2671158 - 2671250
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 121  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  ||||||||||||||||    
T  2671158 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtca 2671250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 54634815 - 54634894
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  54634815 gcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 54634894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 4598999 - 4598922
Alignment:
Q  44 aaatcgtggcacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | |||||||||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  4598999 aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 4598922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 4601220 - 4601143
Alignment:
Q  44 aaatcgtggcacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | |||||||||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  4601220 aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 4601143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10208886 - 10208963
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10208886 aaatcgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtc 10208963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 25637121 - 25637197
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  25637121 aaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 6716190 - 6716269
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  6716190 gcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6716269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 6718374 - 6718453
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  6718374 gcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 1306495 - 1306441
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||||| |||||    
T  1306495 aaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaa 1306441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10055913 - 10055990
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10055913 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10055990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10058135 - 10058212
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10058135 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10060357 - 10060434
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10060357 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10062579 - 10062656
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10062579 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10064801 - 10064878
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10064801 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10067023 - 10067100
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10067023 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10067100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10211086 - 10211163
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| |||||||| || |||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10211086 aaatcgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10211163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 45282671 - 45282750
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  45282671 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 45282750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 7782525 - 7782455
Alignment:
Q  140 atcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    |||||||||||||||  |||||||||| ||||||||  |||| | ||| ||||||||| |||||||||||||||    
T  7782525 atcgtgacacgatct--ggaaatcgtgacacgattttatcagtggagggctagtattt-aagtgttcttgtgca 7782455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 800794 - 800870
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||| | ||  ||||||||| |||||    
T  800794 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtc 800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 33791818 - 33791520
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33791818 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 33791719  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33791718 aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg 33791619  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttcctttgatgagagtgtttct 319  Q
               ||| |||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33791618 -----------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttct 33791531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 2785877 - 2785579
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2785877 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 2785778  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2785777 aacctggggagcgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg 2785678  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttcctttgatgagagtgtttct 319  Q
               ||| |||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2785677 -----------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttct 2785590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 33768686 - 33768388
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33768686 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 33768587  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  33768586 aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcatgactagtatttaaagtgttcttgtgcttttttgg 33768487  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttcctttgatgagagtgtttct 319  Q
               ||| |||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33768486 -----------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttct 33768399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 13 - 330
Target Start/End: Original strand, 31396567 - 31396872
Alignment:
Q  13 gagaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataag 112  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||||    
T  31396567 gagaggcagtgagctaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagacacttgttggttaagtttctctgataag 31396666  T
Q  113 gactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  31396667 gactggtcaacctggggaccgttgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgc 31396766  T
Q  213 atttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagag 312  Q
     ||||||           ||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31396767 ttttttg-----------aagacaaccttgagagagcttaagaga-gaaaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagag 31396854  T
Q  313 tgtttcttaggttgggaa 330  Q
    ||| ||||||||||||||    
T  31396855 tgtatcttaggttgggaa 31396872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 13 - 330
Target Start/End: Original strand, 31401424 - 31401729
Alignment:
Q  13 gagaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataag 112  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| | |||||||||||    
T  31401424 gagaggcagtgagctaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacatgattcagaaacttgctgcttaagtttctctgataag 31401523  T
Q  113 gactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  31401524 gactggtcaacctggggaccgttgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgc 31401623  T
Q  213 atttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagag 312  Q
     ||||||           ||||||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31401624 ttttttg-----------aagacaaccttgagagagcttaagaga-caaaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagag 31401711  T
Q  313 tgtttcttaggttgggaa 330  Q
    ||| ||||||||||||||    
T  31401712 tgtatcttaggttgggaa 31401729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 28807161 - 28807458
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  28807161 gtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc 28807260  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||   ||||||||||| ||||||     
T  28807261 aacctggggaccgttgcagatcgtgacacgatctagggaactcgtggcacgatttcttcagggcaggactagtatatattatgttcttgtgcttttttg- 28807359  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              |||| |||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28807360 ----------aagagaaccttaagagagcttaagaga-gaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 28807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 44 - 330
Target Start/End: Original strand, 37561055 - 37561329
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 143  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  37561055 aaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggttaacctggggaccgttgcagatcg 37561154  T
Q  144 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaacctcaagacaaccttga 243  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||| ||||||||| ||||      ||     
T  37561155 tgacatgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagagaaccttaaga------tg- 37561247  T
Q  244 gagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaa 330  Q
         ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  37561248 ----gcttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttgggaa 37561329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 44 - 330
Target Start/End: Original strand, 37556233 - 37556507
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 143  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||| |||  | ||||||||||||||||    
T  37556233 aaatcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggttaaccagaggaccgttgcagatcg 37556332  T
Q  144 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaacctcaagacaaccttga 243  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||||||| |||||| ||||||||| ||||      ||     
T  37556333 tgacacgatctagggaaatcatggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagagaaccttaaga------tg- 37556425  T
Q  244 gagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaa 330  Q
         ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  37556426 ----gcttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttgggaa 37556507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 29 - 219
Target Start/End: Complemental strand, 15045187 - 15044997
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||| ||||    
T  15045187 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggg 15045088  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  15045087 gtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 15044997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 44 - 218
Target Start/End: Original strand, 1456746 - 1456920
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||| | | |||| ||||    
T  1456746 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtctaccttgggtcagatgcaaatcg 1456845  T
Q  144 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 218  Q
    ||||||| ||| ||||||||||||||||||||||| || | | ||||||||| ||  |||||||||||| |||||    
T  1456846 tgacacggtcttgggaaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgctttttt 1456920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 31180756 - 31180568
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| |||| || ||||| |||| ||||||||||||||||||| | ||    
T  31180756 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgttaagtatcactgataaggactggtcaaccttgg 31180657  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 217  Q
    | | |  ||| ||||||||| ||||| ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||    
T  31180656 gtcagacgcaaatcgtgacatgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 31180568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 27445473 - 27445285
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  27445473 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 27445374  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 218  Q
    | | |  ||| ||||||||||||| | ||||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||| |||||    
T  27445373 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgctttttt 27445285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 27450316 - 27450128
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  27450316 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 27450217  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 218  Q
    | | |  ||| ||||||||||||| | ||||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||| |||||    
T  27450216 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgctttttt 27450128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 211
Target Start/End: Complemental strand, 43599224 - 43599043
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  43599224 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43599125  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 211  Q
    | | |  ||| ||||||||||||| | ||||||||||| ||||||| |||||| | | | ||||||| ||  |||||||||||    
T  43599124 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 211
Target Start/End: Complemental strand, 43604716 - 43604535
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  43604716 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43604617  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 211  Q
    | | |  ||| ||||||||||||| | ||||||||||| ||||||| |||||| | | | ||||||| ||  |||||||||||    
T  43604616 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 211
Target Start/End: Complemental strand, 43610208 - 43610027
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  43610208 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43610109  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 211  Q
    | | |  ||| ||||||||||||| | ||||||||||| ||||||| |||||| | | | ||||||| ||  |||||||||||    
T  43610108 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 43592779 - 43592591
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  43592779 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43592680  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 218  Q
    | | |  ||| ||||||||||||| | ||||||||||| ||||||| |||| | | | | ||||||| ||  |||||||||||| |||||    
T  43592679 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttcttgtgctttttt 43592591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 30631855 - 30631762
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 122  Q
    ||||||| ||| || |||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30631855 agtttgcaggacgccaaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaa 30631762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 24136375 - 24136198
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 142  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| ||||  |||||||||||||||| || | |||||    ||| |||    
T  24136375 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgcaaatc 24136276  T
Q  143 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 222  Q
    ||||||||||||  ||||||||||||||||||   |||| | |   ||||||| ||||||||||||||||||||||||||    
T  24136275 gtgacacgatct--ggaaatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgcatttttggag 24136198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 29402643 - 29402728
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  29402643 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 25077814 - 25077890
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  25077814 aaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 25077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 25135783 - 25135859
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  25135783 aaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 25135859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 10592948 - 10593027
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  10592948 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtc 10593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 22536747 - 22536668
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| ||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  22536747 gcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 22536668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 26177575 - 26177651
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||| ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  26177575 aaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 26177651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 38219921 - 38219845
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||||||||||||| |||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  38219921 aaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactggtc 38219845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 29751615 - 29751461
Alignment:
Q  65 aaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatcgtgacacgatctagggaaatc 163  Q
    ||||||||||||||||  |||||||||| ||||| ||||  |||||||||||||||| || | |||      ||| ||||||||||||| | || |||||    
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgat-ttggaaaatc 29751517  T
Q  164 gtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    ||| ||||||| ||| || | | | ||||||| |||||||||||||||||| ||||    
T  29751516 gtgacacgattgctttagaggaaggctagtatataaagtgttcttgtgcatctttg 29751461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 9789700 - 9789624
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  9789700 aaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 9789624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 18442124 - 18442048
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  18442124 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 18442048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 16544099 - 16544178
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16544099 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16544178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 16546321 - 16546400
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16546321 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16546400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 40379783 - 40379862
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  40379783 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 40379862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 40381994 - 40382073
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  40381994 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 40382073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 9352916 - 9352970
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    |||||||||||||||  || |||||||||||||||||   |||||||||||||||    
T  9352916 aaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaa 9352970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 29720074 - 29720152
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaactatctctgataaggactggtca 121  Q
    |||||||| ||||||  ||||||||||||||||||||  | ||||||||| ||||| | ||  ||||||||||||||||    
T  29720074 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 29720152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 10593044 - 10593119
Alignment:
Q  136 gcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    ||||||||||||||||| | ||||||||||| |||||||||  ||| | | ||||||||| | |||||||||||||||    
T  10593044 gcagatcgtgacacgat-ttgggaaatcgtgacacgatttcaacagaggaagactagtatgt-aagtgttcttgtgca 10593119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 16407750 - 16407826
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  |||||||||| ||||    
T  16407750 aaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtc 16407826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 16409186 - 16409262
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||| ||| |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  16409186 aaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 16409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 26170466 - 26170542
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||| |||||||||||||||  |||   ||||||||| ||||| | ||  |||||||||||||||    
T  26170466 aaatcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtc 26170542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 228; Significance: 1e-126; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 13 - 330
Target Start/End: Original strand, 18741 - 19046
Alignment:
Q  13 gagaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataag 112  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  18741 gagaggcagtgagctaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaa 18840  T
Q  113 gactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 212  Q
    ||||||||| | |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18841 gactggtcatcctggggaccgttgcaaatcgtgacacgatctaaggaaatcgtggcacgatttcttcagggcaggactaatatttaaagtgttcttgtgc 18940  T
Q  213 atttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagag 312  Q
     ||||||           ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18941 ttttttg-----------aagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagag 19028  T
Q  313 tgtttcttaggttgggaa 330  Q
    ||||||||||||||||||    
T  19029 tgtttcttaggttgggaa 19046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 13863 - 14190
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13863 gaggcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 13962  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||      
T  13963 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctc 14062  T
Q  215 ttttg-------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcc 301  Q
    |||||             |||| ||||| ||||||||||||||||     |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  14063 ttttgaaggtaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttcc 14161  T
Q  302 tttgatgagagtgtttcttaggttgggaa 330  Q
    |||||||||||||| ||||||||||||||    
T  14162 tttgatgagagtgtatcttaggttgggaa 14190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 35745893 - 35745595
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  35745893 gtgagccaagtttgttggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtc 35745794  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35745793 aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg 35745694  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttcctttgatgagagtgtttct 319  Q
               ||| |||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35745693 -----------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttct 35745606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 29 - 330
Target Start/End: Original strand, 10683832 - 10684145
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  10683832 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaacttggg 10683931  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg--------- 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||             
T  10683932 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaacc 10684031  T
Q  220 ----gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgt 315  Q
        |||| ||||| ||||||||||||||||     |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10684032 ttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgt 10684130  T
Q  316 ttcttaggttgggaa 330  Q
     ||||||||||||||    
T  10684131 atcttaggttgggaa 10684145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 39784410 - 39784707
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  39784410 gtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc 39784509  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||     
T  39784510 aacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg- 39784608  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              |||| |||||| ||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||| || ||||    
T  39784609 ----------aagagaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtctctt 39784697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 25327757 - 25327947
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  25327757 agtttgcaggacgccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 25327856  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  25327857 gtccgttgcagctcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 25327947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 219
Target Start/End: Complemental strand, 6311842 - 6311652
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||||| |||||| | ||    
T  6311842 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgg 6311743  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | | | |||| |||||||||||||   ||||||||||||||| |||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  6311742 gtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 6311652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 7289521 - 7289711
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||    
T  7289521 agtttgcaggacgccaaatcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtctaccttgg 7289620  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
      | | |||| ||||||||||||||| |||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  7289621 atcagatgcaaatcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 7289711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 10688692 - 10688882
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||||| |||||| | ||    
T  10688692 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgg 10688791  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | | | |||| |||||||||||||   ||||||||||||||| |||||||||| | | ||||||||| ||  ||||||||||||| |||||    
T  10688792 gtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgcagttttg 10688882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 18852720 - 18852909
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| || | |    
T  18852720 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttg 18852819  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    || | |  ||||||||||||||||| |  |||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||||    
T  18852820 ggtcagacgcagatcgtgacacgattt--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttg 18852909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 18870114 - 18870303
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || |||||||||||||| || | |    
T  18870114 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttg 18870213  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    || | |  ||||||||||||||||| |  | |||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||||    
T  18870214 ggtcagacgcagatcgtgacacgattt--gaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttcttgtgcttttttg 18870303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 211
Target Start/End: Complemental strand, 30656189 - 30656008
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc-aacttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||| | |    
T  30656189 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttg 30656090  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 211  Q
    || | |  ||| |||||||||||||||  |||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||    
T  30656089 ggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 30656008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 4759627 - 4759809
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  4759627 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttg 4759726  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 212  Q
    | || |  ||| |||||||||||||||  |||||||||| |||||||||||||| | | ||||||||| ||  ||||||||||||    
T  4759727 gaacggacgcaaatcgtgacacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 4759809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 211
Target Start/End: Complemental strand, 36979921 - 36979741
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || | |    
T  36979921 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttg 36979822  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 211  Q
    ||      ||| |||||||||||||||  |||||||||||||||||| |||||| | | | ||||||||| |||||||||||||    
T  36979821 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtattt-aagtgttcttgtg 36979741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 219
Target Start/End: Original strand, 1261523 - 1261699
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggac---cgttgcag 139  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| ||||  |||||||||||||||| || | |||||   |||| ||     
T  1261523 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacatacgtt-caa 1261621  T
Q  140 atcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    |||||||||||||||  |||||||||| ||||||||  |||| | | | |||||||||||||||||||||||| ||||||    
T  1261622 atcgtgacacgatct--ggaaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgcttttttg 1261699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 33037380 - 33037472
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 121  Q
    ||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||    
T  33037380 agtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 33037472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 25327952 - 25328036
Alignment:
Q  245 agaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaa 330  Q
    |||||||||||||| | ||||||||||||||||  |||||||| |||| |||||  ||||||||||||||| |||| |||||||||    
T  25327952 agaacttaagagag-agaacttggagatcaaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaa 25328036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 25328078 - 25328162
Alignment:
Q  245 agaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaa 330  Q
    |||||||||||||| | ||||||||||||||||  |||||||| |||| |||||  ||||||||||||||| |||| |||||||||    
T  25328078 agaacttaagagag-agaacttggagatcaaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaa 25328162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 3439193 - 3439271
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||| |||||| ||||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  3439193 gcaaaatcgtgacacgat-ttgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 3439271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 25689646 - 25689725
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||||  ||||||||||| |||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  25689646 gcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 42575801 - 42575724
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  42575801 aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 42575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 15290251 - 15290327
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggt 119  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  ||||||||||||||    
T  15290251 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 15470620 - 15470696
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggt 119  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  ||||||||||||||    
T  15470620 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15470696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 2627427 - 2627503
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | ||  ||||||||| |||||    
T  2627427 aaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtc 2627503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 26288408 - 26288332
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||| |||||||||||||||||||| |||   ||||||||| ||||| | ||  |||||||||||||||    
T  26288408 aaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26288332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 26301665 - 26301589
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||| |||||||||||||||||||| |||   ||||||||| ||||| | ||  |||||||||||||||    
T  26301665 aaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 26313659 - 26313583
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||| |||||||||||||||||||| |||   ||||||||| ||||| | ||  |||||||||||||||    
T  26313659 aaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26313583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 19344924 - 19344626
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19344924 gtgagccaagtttgctggaagcaaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 19344825  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19344824 aacctggggaccgttgcagatcatgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg 19344725  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttcctttgatgagagtgtttct 319  Q
               ||| |||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19344724 -----------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttct 19344637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 19349782 - 19349484
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19349782 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtc 19349683  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19349682 aacctgaggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg 19349583  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttcctttgatgagagtgtttct 319  Q
               ||| |||||| ||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19349582 -----------agataaccttaagagagcttaagaga-gaaaacttagagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttct 19349495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 65 - 330
Target Start/End: Complemental strand, 32247244 - 32246989
Alignment:
Q  65 aaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcg 164  Q
    |||||||| ||||||||||||||||||| ||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32247244 aaatcgtggcacgattcagaaacttgctcgttaagtatcactgataaagactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 32247145  T
Q  165 tggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaac 264  Q
    ||||||||||||||||||| ||||||||||| ||  |||||||||||| |||||          | |||| |||||| ||||||||||||||| ||||||    
T  32247144 tggcacgatttcttcaggggaggactagtatatattgtgttcttgtgccttttt---------ttgaagataaccttaagagaacttaagaga-gaaaac 32247055  T
Q  265 ttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaa 330  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||    
T  32247054 ttggagatcaaagagggggtcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaa 32246989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 27 - 219
Target Start/End: Original strand, 39811568 - 39811760
Alignment:
Q  27 caagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttg 126  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||  | |     
T  39811568 caagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtctgcctt 39811667  T
Q  127 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  39811668 ggggccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 39811760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 9295955 - 9296147
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||  |||||||||||||||| || | |    
T  9295955 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttg 9296054  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 222  Q
    || | |  ||| |||||||||||||||  | |||||||| ||||||| |||||| | | |||||||||||||||||||||||||| |||||||||    
T  9296055 ggtcggacgcaaatcgtgacacgatct--gaaaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgcttttttggag 9296147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 14292032 - 14291849
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||||||| || | |    
T  14292032 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttg 14291933  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    ||      ||| |||||||||||||||  ||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||||    
T  14291932 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 14291849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 11098480 - 11098663
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc-aacttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||| ||| | |    
T  11098480 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttg 11098579  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    ||      ||| |||||||||||||||  ||||||||||||||||||||||||| | | |||||| || ||  |||||||||||||    
T  11098580 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagcatatattgtgttcttgtgca 11098663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 12647859 - 12647783
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||  ||||||||||||||||||| || ||||||||| ||||| ||||  |||||||||||||||    
T  12647859 aaatcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtc 12647783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 3492268 - 3492214
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  3492268 aaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaa 3492214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 25410157 - 25410081
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| ||||  ||||||||| |||||    
T  25410157 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtc 25410081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 30833030 - 30833084
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| |||||    
T  30833030 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 30833084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 32247267 - 32247230
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgat 58  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  32247267 gtgagccaagtttgctggatgcaaaatcgtggcacgat 32247230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 4484814 - 4484738
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||||||  | |||||||||||||||   ||||||||| ||||| | ||| |||||||||||||||    
T  4484814 aaatcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtc 4484738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 28258759 - 28258813
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    |||||||||||| || ||| |||||||||||||||||   |||||||||||||||    
T  28258759 aaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaa 28258813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 32289257 - 32289333
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||| || |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  32289257 aaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 32289333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 1818 - 2132
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  1818 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataagga 1917  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |    
T  1918 ctggtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgctt 2017  T
Q  215 ttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 314  Q
     |||| ||  ||||| ||||||||||||||||     |||||  || ||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  2018 atttgaaggtaaccttaagacaaccttgagaggttggaagag-tgataacttggaggtcaaggaggggatcctttggggtgtgttcctttgatgagagtg 2116  T
Q  315 tttcttaggttgggaa 330  Q
    | ||||||||||||||    
T  2117 tatcttaggttgggaa 2132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 148523 - 148837
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  148523 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataagga 148622  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |    
T  148623 ctggtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgctt 148722  T
Q  215 ttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 314  Q
     |||| ||  ||||| ||||||||||||||||     |||||  || ||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  148723 atttgaaggtaaccttaagacaaccttgagaggttggaagag-tgataacttggaggtcaaggaggggatcctttggggtgtgttcctttgatgagagtg 148821  T
Q  315 tttcttaggttgggaa 330  Q
    | ||||||||||||||    
T  148822 tatcttaggttgggaa 148837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 24265756 - 24266083
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24265756 gaggcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 24265855  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||      
T  24265856 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctc 24265955  T
Q  215 ttttg-------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcc 301  Q
    |||||             |||| ||||| ||||||||||||||||     |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  24265956 ttttgaaggtaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttcc 24266054  T
Q  302 tttgatgagagtgtttcttaggttgggaa 330  Q
    |||||||||||||| ||||||||||||||    
T  24266055 tttgatgagagtgtatcttaggttgggaa 24266083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 15 - 327
Target Start/End: Complemental strand, 16880581 - 16880280
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  16880581 gaggcagtgagcctagtttgctggaagcaaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataagga 16880482  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||      
T  16880481 ctggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctc 16880382  T
Q  215 ttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 314  Q
     |||| ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16880381 atttgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 16880293  T
Q  315 tttcttaggttgg 327  Q
      |||||||||||    
T  16880292 aatcttaggttgg 16880280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 15 - 330
Target Start/End: Complemental strand, 16885436 - 16885133
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  16885436 gaggcagtgagcctagtttgctggaagcaaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataagga 16885337  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||      
T  16885336 ctggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctc 16885237  T
Q  215 ttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 314  Q
     |||| ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  16885236 atttgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatccttt-gggtgtgttcctttgatgagagtg 16885149  T
Q  315 tttcttaggttgggaa 330  Q
      ||||||||||||||    
T  16885148 aatcttaggttgggaa 16885133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 24260900 - 24261204
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24260900 gaggcagtgagccaagtaatctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 24260999  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||      
T  24261000 ctggtcaacttgaggaccgttgaaaatcgtgacacgatctagggaaatcgtggcacgatttcatcaggacaggactagtatttaaagtgttcttgtgctc 24261099  T
Q  215 ttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtg 314  Q
     |||| ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24261100 atttgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 24261188  T
Q  315 tttcttaggttgggaa 330  Q
      ||||||||||||||    
T  24261189 aatcttaggttgggaa 24261204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 41 - 328
Target Start/End: Original strand, 21811844 - 21812119
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcaga 140  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  21811844 gcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtcaacctggagaccgttgcaga 21811943  T
Q  141 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaacctcaagacaacct 240  Q
    | ||| |||||||| ||||||||||||||||||||  |||||||||||||||||| ||  |||||||||||| ||||||           |||  |||||    
T  21811944 ttgtgtcacgatcttgggaaatcgtggcacgatttactcagggcaggactagtatatattgtgttcttgtgcttttttg-----------aagctaacct 21812032  T
Q  241 tgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttggg 328  Q
    | ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21812033 taagagaacttaagaga-gaaagcttggaggtcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttggg 21812119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 24023912 - 24024100
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||    
T  24023912 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcaacctggg 24024011  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||  || ||||||||||||| ||||||    
T  24024012 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagta--tatagtgttcttgtgcttttttg 24024100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 28 - 330
Target Start/End: Original strand, 31109163 - 31109467
Alignment:
Q  28 aagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttgg 127  Q
    |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||  | | |    
T  31109163 aagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtctgccttg 31109262  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaac 227  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| |||||| ||| ||     
T  31109263 gggccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagataaa 31109362  T
Q  228 ctcaagaca-accttgagagaacttaagagaggaaaacttggagatcaaa-gaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggtt 325  Q
    || |||| | | ||||   || |||||||||| |||||||||| | |||| ||||| | | | |||| || ||  ||||| ||||||||| |||| ||||    
T  31109363 cttaagagagagcttgtatgagcttaagagagaaaaacttggatagcaaaggagggaaccatatgggttgagtgtctttgttgagagtgtctcttgggtt 31109462  T
Q  326 gggaa 330  Q
    |||||    
T  31109463 gggaa 31109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 29 - 219
Target Start/End: Complemental strand, 4873628 - 4873438
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||||||| |||  | | ||    
T  4873628 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtcttccttgg 4873529  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  4873528 gtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 4873438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 44 - 195
Target Start/End: Complemental strand, 12406749 - 12406598
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||| |||||||| ||||    
T  12406749 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaatcg 12406650  T
Q  144 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtat 195  Q
    ||||||||| | |||||||||||||||||||||||||| | | |||||||||    
T  12406649 tgacacgatttggggaaatcgtggcacgatttcttcagaggaagactagtat 12406598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 56 - 218
Target Start/End: Complemental strand, 12397385 - 12397223
Alignment:
Q  56 gatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcgtgacacgatcta 155  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||| |||||||| ||||||||||||| |     
T  12397385 gatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaatcgtgacacgatttg 12397286  T
Q  156 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 218  Q
    |||||||||||||||||||||||||| | |  |||||||| ||  |||||||||||| |||||    
T  12397285 gggaaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgccttttt 12397223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 2058512 - 2058329
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  2058512 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 2058413  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    ||      ||| |||||||||||||||  |||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||||    
T  2058412 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgca 2058329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 21640330 - 21640238
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 121  Q
    ||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||    
T  21640330 agtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 21640238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 249 - 328
Target Start/End: Complemental strand, 19992595 - 19992517
Alignment:
Q  249 cttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttggg 328  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  19992595 cttaagagag-aaaacttggaggtcaaagaggggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttggg 19992517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 20357121 - 20357214
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 122  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||  |||||||||| ||||||    
T  20357121 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaa 20357214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 219
Target Start/End: Original strand, 24789535 - 24789709
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 142  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||  |||||||||||||||| || | |||      ||| |||    
T  24789535 aaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatc 24789634  T
Q  143 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
     ||||||||| |  |||||||||| ||||||| |||||| | | | ||||||| |||||||||||||||||| ||||    
T  24789635 ttgacacgattt--ggaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttg 24789709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 1533012 - 1533177
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 142  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||| || ||||| ||||  |||||||||||||| | || | |||||     || |||    
T  1533012 aaatcgtgacacgatcttgggaaatcgtgacacgattgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatc 1533111  T
Q  143 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgt 210  Q
    ||||||||||||  |||||||||||||||||| |||||| | | | ||||||| || |||||||||||    
T  1533112 gtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtatatatagtgttcttgt 1533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 6592813 - 6592737
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  6592813 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6592737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 6595029 - 6594953
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  6595029 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6594953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 18414166 - 18414090
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||||||||||||||| |||||||||  ||||||||| ||||| | ||  |||||||||||||||    
T  18414166 aaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18414090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 20343596 - 20343684
Alignment:
Q  32 ttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||| ||| ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  20343596 ttgccggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 20343684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 21646534 - 21646365
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggac---cgttgcag 139  Q
    |||||||| ||||||||||| ||||||||||||||||   ||||||||| ||||| ||||  ||||||| |||||||| || | |||||   |||| ||     
T  21646534 aaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggacgtacgtt-caa 21646436  T
Q  140 atcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    |||||| ||||||||  |||||||||| ||||||||  |||| | | | ||||||||| |||||||||||||||    
T  21646435 atcgtgccacgatct--ggaaatcgtgacacgattttatcagaggaaggctagtattt-aagtgttcttgtgca 21646365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 32060780 - 32060704
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | || |||||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  32060780 aaatcgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 32060704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 1562479 - 1562403
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||| |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  1562479 aaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 1562403  T

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Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 18409290 - 18409214
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||| || |||||||||| ||||||||||||||||||  ||||||||| ||||| | ||  |||||||||||||||    
T  18409290 aaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18409214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 43504612 - 43504536
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||| ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  43504612 aaatcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 43504536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 48408507 - 48408583
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||||||| |||||||||||||||||   ||||||||| ||||| | |||  ||||||||||||||    
T  48408507 aaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtc 48408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 25767437 - 25767361
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | |||  ||||||||| ||||    
T  25767437 aaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtc 25767361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 39731042 - 39731118
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  39731042 aaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 39731118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 18389239 - 18389160
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  18389239 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 18389160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 18392675 - 18392596
Alignment:
Q  41 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  18392675 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 18392596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 176529 - 176858
Alignment:
Q  15 gaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  176529 gaggcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 176628  T
Q  115 ctggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat 214  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||      
T  176629 ctggtcaactttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctc 176728  T
Q  215 ttttg---------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgtt 299  Q
    |||||               |||| ||||| ||||||||||||||||     |||||| || ||||||||||||||||||||||||||||||||||||||    
T  176729 ttttgaagaaaaaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgtt 176827  T
Q  300 cctttgatgagagtgtttcttaggttgggaa 330  Q
    |||||||||||||||| ||||||||||||||    
T  176828 cctttgatgagagtgtatcttaggttgggaa 176858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 12 - 330
Target Start/End: Original strand, 45347393 - 45347700
Alignment:
Q  12 agagaggcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataa 111  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  45347393 agagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataa 45347492  T
Q  112 ggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 211  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||| ||  |||||||||||    
T  45347493 ggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaaaactagtatatattgtgttcttgtg 45347592  T
Q  212 catttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgaga 311  Q
    | ||||||           ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  45347593 cttttttg-----------aagacaaccttaagagagcttaagagagaaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgaga 45347681  T
Q  312 gtgtttcttaggttgggaa 330  Q
    |||| ||||||||||||||    
T  45347682 gtgtctcttaggttgggaa 45347700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 21 - 330
Target Start/End: Original strand, 45356883 - 45357180
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  45356883 gtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 45356982  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||  |||||||||||| ||||||     
T  45356983 aacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttctggggaggactagtatatattgtgttcttgtgcttttttg- 45357081  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  45357082 ----------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttctt 45357170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 27 - 330
Target Start/End: Complemental strand, 5733155 - 5732865
Alignment:
Q  27 caagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttg 126  Q
    ||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||    
T  5733155 caagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctg 5733056  T
Q  127 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||||||||  |||||            
T  5733055 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtg--ttttt-------- 5732966  T
Q  227 cctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttg 326  Q
      | ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  5732965 --tgaagacaaccttaagagagcttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttg 5732869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 18856224 - 18855927
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  18856224 gtgagccaagtttgctggatgcaaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 18856125  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||     
T  18856124 aacctgggaaccgttgcagatcgtgacatgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg- 18856026  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||| ||| |||||||| | ||||||||||||| |||||||    
T  18856025 ----------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggagcctatggggtgtttgcctttgatgagagagtttctt 18855937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 27 - 330
Target Start/End: Complemental strand, 3814514 - 3814224
Alignment:
Q  27 caagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttg 126  Q
    |||||||||  || || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||    
T  3814514 caagtttgcaagacgccaaatcgtgtcacgat-ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctg 3814416  T
Q  127 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaa 226  Q
     | ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||| ||  |||||||||||| ||||||           
T  3814415 agaaccgttgcagatcgtgacaagatctagggaaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg------- 3814323  T
Q  227 cctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttg 326  Q
        |||||||||||  |||| ||||||||| ||||||||||| |||||||  |||||||| ||||||||||  ||||||||||||||||||||||||||    
T  3814322 ----aagacaaccttaggagagcttaagaga-gaaaacttggacatcaaaggagggatcctatggggtgtgtgtctttgatgagagtgtttcttaggttg 3814228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 9228780 - 9228969
Alignment:
Q  30 gtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttgggg 129  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | |||    
T  9228780 gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttggg 9228879  T
Q  130 accgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  9228880 tccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 9228969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 18712348 - 18712538
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  18712348 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 18712447  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | |||||| |||||||||||| ||||||| ||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  18712448 gtccgttgaagatcgtgacacaatctaggaaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 18712538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 9223992 - 9224182
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||    
T  9223992 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgg 9224091  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||||||||| ||  |||||||| ||| ||||||    
T  9224092 gtccgttgcagatcgtgacacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttctgcttttttg 9224182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 42 - 219
Target Start/End: Original strand, 56141618 - 56141795
Alignment:
Q  42 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagat 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||| | | |||| ||    
T  56141618 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagatgcaaat 56141717  T
Q  142 cgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    ||||||||||||| |||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  56141718 cgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 56141795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 24742484 - 24742301
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 127  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || |||    
T  24742484 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgg 24742385  T
Q  128 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    | || |  ||| |||||| ||||||||  |||||||||| |||||||||||||| | | ||||||||| ||  |||||||||||||    
T  24742384 gaacggacgcaaatcgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgca 24742301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 51520957 - 51520769
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||||| || || | ||    
T  51520957 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatctaccttgg 51520858  T
Q  129 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 218  Q
    | | |  ||| ||||||||||||| | ||||||||||||||| ||| |||||| | | | ||||||| ||  |||||||||||| |||||    
T  51520857 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtggcacaattgcttcagaggaaggctagtatatattgtgttcttgtgctttttt 51520769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 29761165 - 29761073
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 121  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||    
T  29761165 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 29761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 7122375 - 7122451
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  7122375 aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7122451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 7124597 - 7124673
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  7124597 aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7124673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 8393090 - 8393166
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  8393090 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtc 8393166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 28468086 - 28468162
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||||||| ||||||||||||||||   ||||||||| ||||| | ||| |||||||||||||||    
T  28468086 aaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtc 28468162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 13992770 - 13992592
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggac---cgttgcag 139  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | |   |||||||||||||||| || | | |||   |||  ||     
T  13992770 aaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgacgtacgtatca- 13992672  T
Q  140 atcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 222  Q
    |||||||||||||||  |||||||||| ||||||||  |||| | | ||||||||||| |||||||||||||||  |||||||    
T  13992671 atcgtgacacgatct--ggaaatcgtgacacgattttatcagtggaagactagtattt-aagtgttcttgtgcagatttggag 13992592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 8395299 - 8395375
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||| ||||||| | || |||||||||||| || |||||||||||| ||||| ||||  |||||||||||||||    
T  8395299 aaatcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtc 8395375  T

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Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 5135757 - 5135834
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||| ||||    
T  5135757 aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5135834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 5137983 - 5138060
Alignment:
Q  44 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||| ||||    
T  5137983 aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5138060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 31495793 - 31495717
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  31495793 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 31495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 29761055 - 29761001
Alignment:
Q  159 aaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 213  Q
    ||||||||||||||||||||||| | | ||||||||| ||  |||||||||||||    
T  29761055 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 29761001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 18860436 - 18860403
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggca 54  Q
    ||||||||||||||||||| ||||||||||||||    
T  18860436 gtgagccaagtttgctggatgcaaaatcgtggca 18860403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 21 - 330
Target Start/End: Complemental strand, 860 - 563
Alignment:
Q  21 gtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  860 gtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 761  T
Q  121 aacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttgg 220  Q
    ||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||| ||  |||||||||||| ||||||     
T  760 aactttggttccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactggtatatattgtgttcttgtgcttttttg- 662  T
Q  221 agagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttctt 320  Q
              ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  661 ----------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttctt 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 44 - 218
Target Start/End: Original strand, 3445 - 3619
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||| |||||| |||||||||||||||||||    
T  3445 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtcaacctggggaccgttgcagatcg 3544  T
Q  144 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 218  Q
    |||||||||||||| |||||||| |||||||||||||||| | ||||||||| ||  || ||||||||| |||||    
T  3545 tgacacgatctaggaaaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgctttttt 3619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 44 - 219
Target Start/End: Original strand, 34662 - 34837
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||| |||||||||||||    
T  34662 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagatcg 34761  T
Q  144 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 219  Q
    ||||||||||||||||||||||||||| |||||||||| | | ||||||||| ||  |||||||| ||| ||||||    
T  34762 tgacacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttcttttgcttttttg 34837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 8199 - 8091
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 128  Q
    ||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  8199 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 8100  T
Q  129 gaccgttgc 137  Q
    | |||||||    
T  8099 gtccgttgc 8091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 4202 - 4126
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  4202 aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 4126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 22033 - 22124
Alignment:
Q  29 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    ||||||| ||| || |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| |||| ||||||||||| ||||    
T  22033 agtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtc 22124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 3077 - 3001
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| |||   |||||||||||||||    
T  3077 aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtc 3001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 17540 - 17616
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| ||||||||||||||||||||||| ||||   ||||||||| ||||| ||||  ||||||||| |||||    
T  17540 aaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtc 17616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 11644 - 11569
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  11644 aaatcgtgacacgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 9184 - 9124
Alignment:
Q  60 ttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 120  Q
    |||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  9184 ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 9124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 1192 - 1246
Alignment:
Q  44 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 98  Q
    ||||||||| ||||| ||| |||||||||||||||||   |||||||||||||||    
T  1192 aaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaa 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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