View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11137_low_32 (Length: 330)
Name: NF11137_low_32
Description: NF11137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11137_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 11 - 313
Target Start/End: Original strand, 8861245 - 8861549
Alignment:
| Q |
11 |
cacagaggccagaaaaactagacctagatgctaatggtactgtttgactgattttccagtttacatccaaattcattaagatttt-ggtaactcggtcnn |
109 |
Q |
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| T |
8861245 |
cacagaggccagaaaaactagacctagatgctaatggtactgtttgactgattttccagtttacatccaaattcattaagatttttggtaactctgtcaa |
8861344 |
T |
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| Q |
110 |
nnnnnn-cataccaagaagagattgtacaaaatgcagaatatcttatcattattattttcatgctacaaaaataataagggcacgcactaccaaatccac |
208 |
Q |
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| T |
8861345 |
aaaaaaacataccaagaagagattgtacaaaatgcagaatatcttatcattattattttcatgctacaaaaataataagggcacgcactaccaaatccac |
8861444 |
T |
|
| Q |
209 |
tgaaaacatgatagtacaagtctaaattatttcacagacaagttaaagacaaaattttgattgtgaccaagccaaattcacactatgaaagagaggaaag |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8861445 |
tgaaaacatgatagtacaagtctaaattatttcacagacaagttaaagacaaaattttgattgtgaccaagccaaattcacactatgaaagagaggaaag |
8861544 |
T |
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| Q |
309 |
aaagt |
313 |
Q |
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||||| |
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| T |
8861545 |
aaagt |
8861549 |
T |
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