View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11137_low_40 (Length: 266)
Name: NF11137_low_40
Description: NF11137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11137_low_40 |
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Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 22324822 - 22325071
Alignment:
| Q |
1 |
atcagaaaacattttgctaattgtatccatatcaacagttctacggtaagcacgaatttctgtccgaagggtgtgcaattttttaaactccacaagtaaa |
100 |
Q |
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| T |
22324822 |
atcagaaaacattttgctaattgtatccatatcaacagttctacggtaagcacgaatttctgtccgaagggtgtgcaattttttaaactccacaagtaaa |
22324921 |
T |
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| Q |
101 |
cgagcacactgattcctcaaagtcttcaagtcatagcggtatgctatcttcatcctctcaactacattctgtgtagtgatatctcttatgagccttttct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22324922 |
cgagcacactgattcctcaaagtcttcaagtcatagcggtatgttatcttcatcctctcaactacattctgtgtagtgatatctcttatgagccttttct |
22325021 |
T |
|
| Q |
201 |
caatatcctttatcagatcaattacatcatatttctttgcagcttctaat |
250 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
22325022 |
caatatcctttatcaaatcaattacatcatatttctttgcagcttctaat |
22325071 |
T |
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