View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11139_low_7 (Length: 330)
Name: NF11139_low_7
Description: NF11139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11139_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 326
Target Start/End: Original strand, 2731016 - 2731324
Alignment:
| Q |
18 |
ctcccatcgaaccaaacatcccccagcctcttttcaagctcctcttcattgttcacctccttaaacatcacaaagtcatattttctccctcattgatccc |
117 |
Q |
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| T |
2731016 |
ctcccatcgaaccaaacatcccccagcctcttttcaagctcctcttcattgttcacctccttaaacatcacaaaatcatattttctccctcattgatccc |
2731115 |
T |
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| Q |
118 |
tcttttgagtaatatagactttccccacctcccatatttagcaaaaagtttccataactcttatcatttttacctcatcctagaagttactgaagaagaa |
217 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| |
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| T |
2731116 |
tcttttgaggaatatagactttccccacctcccatatttagcaaaaagtttccataactcttatcatttttacctcatcttaaaagttagtgaagaagaa |
2731215 |
T |
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| Q |
218 |
ggggatggtaacctgatcaagattatgcacataccctttcctccttgtcgggtgtgcatttctcgccttttaaaaaacccatatggaccccttttcccct |
317 |
Q |
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|||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
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| T |
2731216 |
ggggatggtaacctgatcaagattattcacataacctttcctccttgtcgggtgtgcatttctcgccttttaaaaaacccatatgggccccttttctcct |
2731315 |
T |
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| Q |
318 |
ttgcttctc |
326 |
Q |
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||| ||||| |
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| T |
2731316 |
ttgtttctc |
2731324 |
T |
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