View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11139_low_8 (Length: 325)

Name: NF11139_low_8
Description: NF11139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11139_low_8
NF11139_low_8
[»] chr1 (43 HSPs)
chr1 (20-320)||(33087871-33088173)
chr1 (207-316)||(36613903-36614016)
chr1 (218-316)||(35594217-35594317)
chr1 (221-316)||(45149969-45150068)
chr1 (218-316)||(24422800-24422902)
chr1 (218-306)||(11437208-11437300)
chr1 (216-316)||(45148579-45148682)
chr1 (216-316)||(39699766-39699869)
chr1 (216-316)||(41364827-41364930)
chr1 (218-316)||(51685764-51685866)
chr1 (221-316)||(24426074-24426173)
chr1 (221-316)||(39153115-39153214)
chr1 (221-314)||(43058789-43058885)
chr1 (217-316)||(51684365-51684468)
chr1 (218-309)||(52274968-52275063)
chr1 (218-316)||(23980465-23980567)
chr1 (218-316)||(33088616-33088718)
chr1 (240-316)||(7675458-7675536)
chr1 (221-316)||(43378712-43378810)
chr1 (209-292)||(14999276-14999361)
chr1 (218-292)||(7674528-7674603)
chr1 (218-316)||(11436042-11436144)
chr1 (221-316)||(37526877-37526975)
chr1 (216-316)||(39222472-39222577)
chr1 (218-316)||(36612853-36612954)
chr1 (218-316)||(41366130-41366231)
chr1 (216-309)||(46066523-46066617)
chr1 (208-316)||(39151921-39152033)
chr1 (218-316)||(45157208-45157309)
chr1 (221-316)||(52276162-52276261)
chr1 (221-316)||(52828069-52828168)
chr1 (218-316)||(35067001-35067103)
chr1 (218-316)||(52827347-52827449)
chr1 (221-316)||(50680335-50680433)
chr1 (218-316)||(25652715-25652816)
chr1 (218-309)||(44404442-44404537)
chr1 (218-309)||(39698563-39698657)
chr1 (239-308)||(43060013-43060084)
chr1 (221-316)||(7983053-7983151)
chr1 (218-316)||(12389981-12390082)
chr1 (218-316)||(35595191-35595294)
chr1 (217-270)||(33739093-33739147)
chr1 (216-269)||(7987905-7987958)
[»] chr2 (37 HSPs)
chr2 (219-308)||(13030293-13030383)
chr2 (214-298)||(24476862-24476947)
chr2 (218-316)||(22587953-22588054)
chr2 (218-316)||(22848191-22848293)
chr2 (218-316)||(38840492-38840594)
chr2 (218-311)||(7899886-7899983)
chr2 (219-316)||(18300724-18300822)
chr2 (221-316)||(28617926-28618023)
chr2 (213-297)||(36449773-36449860)
chr2 (218-308)||(18905995-18906088)
chr2 (214-272)||(21837066-21837124)
chr2 (239-316)||(11258810-11258889)
chr2 (218-269)||(21837303-21837354)
chr2 (218-316)||(38839242-38839344)
chr2 (218-316)||(11257622-11257723)
chr2 (216-316)||(18299371-18299475)
chr2 (218-316)||(18797246-18797349)
chr2 (218-314)||(18904367-18904467)
chr2 (219-316)||(1033212-1033311)
chr2 (221-316)||(7898694-7898793)
chr2 (218-316)||(23869534-23869635)
chr2 (231-297)||(32739638-32739705)
chr2 (218-304)||(18868924-18869013)
chr2 (219-316)||(26545520-26545621)
chr2 (221-316)||(36450920-36451018)
chr2 (216-316)||(41878090-41878196)
chr2 (218-297)||(11938808-11938889)
chr2 (235-297)||(24475243-24475306)
chr2 (218-308)||(41879219-41879313)
chr2 (218-316)||(802590-802691)
chr2 (221-316)||(8535655-8535752)
chr2 (218-309)||(1034475-1034570)
chr2 (237-316)||(22587522-22587602)
chr2 (221-292)||(13567975-13568049)
chr2 (221-316)||(26544152-26544250)
chr2 (277-316)||(27553764-27553803)
chr2 (244-316)||(810780-810854)
[»] chr5 (35 HSPs)
chr5 (216-314)||(22940624-22940725)
chr5 (218-316)||(25523069-25523171)
chr5 (209-308)||(5962579-5962680)
chr5 (218-316)||(19752912-19753013)
chr5 (218-316)||(28538676-28538778)
chr5 (218-308)||(18154494-18154586)
chr5 (218-316)||(19754129-19754232)
chr5 (218-316)||(5777901-5778001)
chr5 (221-316)||(24332916-24333015)
chr5 (218-316)||(18486901-18487003)
chr5 (218-316)||(36486487-36486589)
chr5 (218-298)||(33158098-33158181)
chr5 (218-316)||(5778835-5778937)
chr5 (236-309)||(7311610-7311685)
chr5 (236-316)||(28539819-28539901)
chr5 (217-309)||(25056387-25056483)
chr5 (216-292)||(1796052-1796131)
chr5 (216-298)||(20214194-20214278)
chr5 (221-291)||(2685749-2685820)
chr5 (218-316)||(16650854-16650956)
chr5 (218-316)||(18485138-18485247)
chr5 (218-316)||(21835041-21835142)
chr5 (218-310)||(33160291-33160387)
chr5 (258-316)||(25524097-25524157)
chr5 (218-292)||(25524151-25524229)
chr5 (236-316)||(36485320-36485402)
chr5 (221-316)||(42195137-42195234)
chr5 (212-316)||(25055406-25055514)
chr5 (237-289)||(34893686-34893739)
chr5 (218-296)||(5730441-5730523)
chr5 (221-316)||(20216762-20216861)
chr5 (213-316)||(42196199-42196306)
chr5 (266-316)||(16650043-16650094)
chr5 (218-316)||(40255671-40255773)
chr5 (231-316)||(1016863-1016949)
[»] chr3 (45 HSPs)
chr3 (218-316)||(29932698-29932799)
chr3 (218-316)||(29981852-29981953)
chr3 (218-316)||(12703499-12703600)
chr3 (218-316)||(54540789-54540891)
chr3 (218-315)||(7758402-7758503)
chr3 (218-309)||(12700175-12700268)
chr3 (214-316)||(47614181-47614287)
chr3 (219-309)||(8456479-8456572)
chr3 (221-309)||(7267647-7267738)
chr3 (218-316)||(29931226-29931328)
chr3 (218-316)||(29980380-29980482)
chr3 (218-309)||(534499-534594)
chr3 (213-316)||(22776811-22776918)
chr3 (222-317)||(24516464-24516563)
chr3 (216-316)||(51037534-51037637)
chr3 (212-316)||(51469966-51470074)
chr3 (216-316)||(52840603-52840707)
chr3 (221-316)||(47610579-47610678)
chr3 (218-316)||(19984849-19984951)
chr3 (221-316)||(7268826-7268924)
chr3 (240-316)||(55191994-55192072)
chr3 (218-318)||(5029680-5029783)
chr3 (218-314)||(11671342-11671441)
chr3 (221-306)||(52104484-52104569)
chr3 (216-310)||(535787-535885)
chr3 (218-316)||(19986069-19986173)
chr3 (218-316)||(46721219-46721321)
chr3 (218-316)||(47609697-47609799)
chr3 (218-308)||(54539755-54539849)
chr3 (218-269)||(47615596-47615649)
chr3 (216-297)||(53901407-53901489)
chr3 (218-308)||(51470462-51470555)
chr3 (221-316)||(54987006-54987103)
chr3 (218-290)||(5001200-5001275)
chr3 (240-291)||(6170296-6170348)
chr3 (277-316)||(10584039-10584078)
chr3 (243-316)||(31645000-31645075)
chr3 (218-316)||(52839037-52839139)
chr3 (221-308)||(34019152-34019241)
chr3 (216-308)||(49216245-49216341)
chr3 (239-306)||(6171251-6171319)
chr3 (240-307)||(6249633-6249701)
chr3 (273-316)||(23770406-23770450)
chr3 (221-315)||(40426778-40426877)
chr3 (217-316)||(46719940-46720043)
[»] chr6 (28 HSPs)
chr6 (216-316)||(7314878-7314981)
chr6 (216-316)||(1829602-1829706)
chr6 (216-313)||(16703568-16703666)
chr6 (216-316)||(30495696-30495799)
chr6 (218-316)||(8659265-8659367)
chr6 (218-308)||(8660211-8660304)
chr6 (218-308)||(8821873-8821967)
chr6 (218-316)||(16704496-16704598)
chr6 (218-318)||(27322065-27322168)
chr6 (214-310)||(8822798-8822898)
chr6 (218-316)||(10784592-10784695)
chr6 (221-316)||(26575053-26575150)
chr6 (218-316)||(7316293-7316395)
chr6 (218-307)||(14823583-14823677)
chr6 (218-316)||(3721612-3721714)
chr6 (241-315)||(12350823-12350898)
chr6 (218-318)||(27318315-27318420)
chr6 (218-296)||(3722527-3722608)
chr6 (236-316)||(10785912-10785994)
chr6 (218-307)||(14822360-14822453)
chr6 (239-316)||(26574642-26574720)
chr6 (218-316)||(27437828-27437930)
chr6 (236-316)||(17496817-17496900)
chr6 (260-316)||(22418894-22418950)
chr6 (221-316)||(34834578-34834677)
chr6 (218-291)||(6842308-6842384)
chr6 (218-316)||(6840194-6840294)
chr6 (231-291)||(26949210-26949268)
[»] chr4 (43 HSPs)
chr4 (218-312)||(49308031-49308127)
chr4 (221-316)||(35934347-35934444)
chr4 (209-316)||(31600984-31601095)
chr4 (218-316)||(1290197-1290299)
chr4 (221-316)||(8155741-8155839)
chr4 (213-316)||(17382988-17383094)
chr4 (218-316)||(1835101-1835203)
chr4 (218-316)||(1963196-1963298)
chr4 (220-316)||(19750574-19750673)
chr4 (220-316)||(19789133-19789232)
chr4 (218-310)||(26421627-26421722)
chr4 (218-316)||(31599789-31599891)
chr4 (215-316)||(10471387-10471492)
chr4 (221-316)||(12129626-12129725)
chr4 (218-316)||(10470546-10470648)
chr4 (218-314)||(17388212-17388311)
chr4 (218-316)||(25685821-25685923)
chr4 (218-316)||(5526125-5526226)
chr4 (218-316)||(8757675-8757776)
chr4 (217-316)||(25684933-25685036)
chr4 (218-295)||(49306775-49306854)
chr4 (216-316)||(33310088-33310189)
chr4 (218-316)||(48781045-48781146)
chr4 (218-316)||(13386531-13386634)
chr4 (221-308)||(8758844-8758935)
chr4 (216-316)||(1834117-1834222)
chr4 (218-316)||(48780248-48780350)
chr4 (236-316)||(5525379-5525461)
chr4 (218-318)||(14868890-14868992)
chr4 (218-318)||(14876942-14877044)
chr4 (240-316)||(46638724-46638802)
chr4 (218-316)||(10447006-10447109)
chr4 (218-316)||(13509358-13509459)
chr4 (216-316)||(50909671-50909776)
chr4 (218-316)||(52491606-52491708)
chr4 (248-316)||(21539070-21539140)
chr4 (221-309)||(35935539-35935631)
chr4 (243-291)||(26420342-26420390)
chr4 (235-316)||(10448259-10448342)
chr4 (218-309)||(13386014-13386111)
chr4 (277-316)||(33997853-33997892)
chr4 (221-263)||(55603585-55603628)
chr4 (236-316)||(21178016-21178098)
[»] chr8 (41 HSPs)
chr8 (212-316)||(5513976-5514083)
chr8 (215-316)||(10006341-10006446)
chr8 (218-316)||(12353360-12353460)
chr8 (218-314)||(22221365-22221465)
chr8 (218-314)||(22227707-22227807)
chr8 (239-309)||(1824084-1824156)
chr8 (239-309)||(1858529-1858601)
chr8 (218-316)||(8388464-8388564)
chr8 (218-316)||(32207324-32207424)
chr8 (218-316)||(10007762-10007864)
chr8 (218-316)||(30335639-30335741)
chr8 (236-316)||(18978039-18978121)
chr8 (240-316)||(24123897-24123975)
chr8 (221-316)||(29968336-29968434)
chr8 (216-316)||(11287774-11287878)
chr8 (221-316)||(11282011-11282110)
chr8 (218-309)||(30336507-30336602)
chr8 (237-316)||(45112891-45112971)
chr8 (218-316)||(1823552-1823654)
chr8 (218-316)||(1857997-1858099)
chr8 (218-308)||(2379931-2380021)
chr8 (236-316)||(18970930-18971012)
chr8 (216-316)||(22220386-22220490)
chr8 (236-316)||(24488679-24488760)
chr8 (218-316)||(5514270-5514370)
chr8 (218-309)||(12351921-12352016)
chr8 (218-310)||(5003103-5003197)
chr8 (219-316)||(18979119-18979220)
chr8 (218-309)||(24359809-24359902)
chr8 (218-316)||(11283208-11283310)
chr8 (221-316)||(30570255-30570353)
chr8 (221-315)||(40471147-40471244)
chr8 (218-308)||(24122883-24122976)
chr8 (218-263)||(11288914-11288961)
chr8 (218-281)||(23170034-23170098)
chr8 (216-269)||(24483141-24483196)
chr8 (218-306)||(45114526-45114617)
chr8 (221-314)||(8389690-8389787)
chr8 (232-315)||(40469356-40469441)
chr8 (220-316)||(43661267-43661367)
chr8 (216-269)||(32973984-32974039)
[»] chr7 (30 HSPs)
chr7 (216-308)||(18371422-18371518)
chr7 (235-316)||(22629505-22629588)
chr7 (218-310)||(127337-127431)
chr7 (236-315)||(18372457-18372538)
chr7 (216-316)||(31659620-31659725)
chr7 (218-316)||(21505416-21505516)
chr7 (218-316)||(3227593-3227695)
chr7 (231-316)||(47369796-47369883)
chr7 (218-315)||(22630452-22630553)
chr7 (218-316)||(7500455-7500556)
chr7 (218-310)||(17782558-17782654)
chr7 (218-316)||(7501851-7501953)
chr7 (218-316)||(31949322-31949424)
chr7 (221-316)||(42886285-42886384)
chr7 (218-292)||(597308-597381)
chr7 (216-316)||(47525366-47525470)
chr7 (216-316)||(48934902-48935006)
chr7 (219-316)||(3227109-3227209)
chr7 (218-316)||(31949801-31949903)
chr7 (220-316)||(17781663-17781763)
chr7 (223-316)||(14999154-14999249)
chr7 (213-315)||(11658374-11658480)
chr7 (218-287)||(20163585-20163657)
chr7 (221-316)||(11662550-11662649)
chr7 (218-269)||(14998008-14998062)
chr7 (218-292)||(43899448-43899523)
chr7 (218-281)||(34174018-34174083)
chr7 (221-316)||(128600-128699)
chr7 (277-316)||(14998042-14998082)
chr7 (225-281)||(47524532-47524591)
[»] scaffold0302 (2 HSPs)
scaffold0302 (218-316)||(17470-17572)
scaffold0302 (217-316)||(18775-18878)
[»] scaffold0294 (2 HSPs)
scaffold0294 (218-311)||(5442-5539)
scaffold0294 (218-311)||(4442-4539)
[»] scaffold0186 (2 HSPs)
scaffold0186 (216-316)||(23079-23181)
scaffold0186 (218-266)||(23941-23991)
[»] scaffold0586 (2 HSPs)
scaffold0586 (218-310)||(9032-9126)
scaffold0586 (266-309)||(6394-6438)
[»] scaffold0019 (2 HSPs)
scaffold0019 (216-316)||(60088-60192)
scaffold0019 (219-316)||(61458-61559)
[»] scaffold0093 (2 HSPs)
scaffold0093 (212-308)||(2472-2571)
scaffold0093 (212-308)||(7095-7194)
[»] scaffold0112 (2 HSPs)
scaffold0112 (212-311)||(37142-37244)
scaffold0112 (268-311)||(40641-40684)
[»] scaffold0632 (1 HSPs)
scaffold0632 (218-316)||(3307-3408)
[»] scaffold2034 (1 HSPs)
scaffold2034 (217-316)||(232-335)
[»] scaffold0320 (1 HSPs)
scaffold0320 (218-316)||(19488-19590)
[»] scaffold0369 (1 HSPs)
scaffold0369 (218-306)||(13193-13283)
[»] scaffold0059 (2 HSPs)
scaffold0059 (231-309)||(3690-3770)
scaffold0059 (219-316)||(4729-4829)
[»] scaffold1303 (1 HSPs)
scaffold1303 (218-316)||(1439-1541)
[»] scaffold0003 (1 HSPs)
scaffold0003 (218-316)||(49432-49534)
[»] scaffold0049 (1 HSPs)
scaffold0049 (266-316)||(7414-7465)


Alignment Details
Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 20 - 320
Target Start/End: Original strand, 33087871 - 33088173
Alignment:
Q  20 cgactttgtgacagtactcggtcagattttacagtactctttgttggagtgatttctggcaaaatctaaccgtcttgctatgnnnnnnnggtcttgttgg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||       | |||||||||    
T  33087871 cgactttgtgacagtactcggtcagattttacagtactctttgttggagtgatttctggcaaaatccaaccgtcttggtatgtttttttg-tcttgttgg 33087969  T
Q  120 ctaataaatgatgcacttcttcgtggttctttttctttatagtacgaatattttgacaagggagaattttatttgcaaagtgtaatcaattttatattgg 219  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||    
T  33087970 ctaataaatgatgcaaatcttcgtggttcttttcctttatagtacgaatattttgacaagggagaattttacttgcaaagtgttatcaattttatatcgg 33088069  T
Q  220 ctaaagtgcactttttc-ccctaactttcaaaaacttgtaa-ttttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||  ||| || |  |||||||||||||||||||||| ||||  | ||||| || ||||| |||||||||   ||| ||||||||||||| |||||    
T  33088070 ctaaagtatactgttccttcctaactttcaaaaacttgtaatttttatctcctaaatataaaaactacaattttattcccttaagatttagcccatttgc 33088169  T
Q  317 ttct 320  Q
    ||||    
T  33088170 ttct 33088173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 207 - 316
Target Start/End: Complemental strand, 36614016 - 36613903
Alignment:
Q  207 aattttatattggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaaga 302  Q
    |||| |||||||||||||||||| ||||  |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  36614016 aattctatattggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaaga 36613917  T
Q  303 tttagcccctttgc 316  Q
    ||||||| ||||||    
T  36613916 tttagcctctttgc 36613903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 35594217 - 35594317
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttgccccctaagatttagcccctttg 315  Q
    ||||||||||||||||| |  |||||||||||||||||||| ||||||| ||||||||||  |||| |||||||||| ||||||| ||||||||||||||    
T  35594217 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgacccctaagtattaaaactacaattttgacccctaaaatttagcccctttg 35594316  T
Q  316 c 316  Q
    |    
T  35594317 c 35594317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 45150068 - 45149969
Alignment:
Q  221 taaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg--ccccctaagatttagcccctttgc 316  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||||||  |||||||||  ||||||||||||||||||||||||    
T  45150068 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttgc 45149969  T

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Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 24422800 - 24422902
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||| |||| |||||||||||| ||||||||| |||||||||||||||||||| |    
T  24422800 ggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccccat 24422899  T
Q  314 tgc 316  Q
    |||    
T  24422900 tgc 24422902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 11437300 - 11437208
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagattta 306  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||| ||| |||||||||||| ||||||||| |||||||||||||||    
T  11437300 ggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagattta 11437208  T

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Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 45148579 - 45148682
Alignment:
Q  216 ttggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccc 311  Q
    |||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||||| ||||| |||||||||| |||||||||||||| ||||    
T  45148579 ttggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaacccc 45148677  T
Q  312 tttgc 316  Q
    |||||    
T  45148678 tttgc 45148682  T

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Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 39699869 - 39699766
Alignment:
Q  216 ttggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagcccct 312  Q
    ||||||||||||||||||| |||| |||||||||| |||||| |||||||  |||||||||||| ||| ||||||||| ||||||||||||||||||||     
T  39699869 ttggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagcccca 39699770  T
Q  313 ttgc 316  Q
    ||||    
T  39699769 ttgc 39699766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 41364827 - 41364930
Alignment:
Q  216 ttggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccct 312  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| ||| ||||  ||||||| | |||||||||||||||||||     
T  41364827 ttggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagcccca 41364926  T
Q  313 ttgc 316  Q
    ||||    
T  41364927 ttgc 41364930  T

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Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 51685866 - 51685764
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||  |||||||||||| |||  |||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||    
T  51685866 ggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccctt 51685767  T
Q  314 tgc 316  Q
    |||    
T  51685766 tgc 51685764  T

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Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 24426173 - 24426074
Alignment:
Q  221 taaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||  |||||  |||||||||||||||| |||||||| |||||||||||||||| ||||||||| | |||||||||||||||||| ||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgc 24426074  T

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Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 39153214 - 39153115
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||||||||  ||| ||||||||||||| |||||||||||| || ||||||||| |||||||||| ||| |||||||||| |||||||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 39153115  T

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Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 43058789 - 43058885
Alignment:
Q  221 taaagtgcactttttcccc-taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    |||||| |||||||||||| ||||||| ||||||||| |||||||  |||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  43058789 taaagtacactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagccccttt 43058885  T

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Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 51684365 - 51684468
Alignment:
Q  217 tggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccct 312  Q
    |||||||||||||||||| ||||  ||||||| ||||| ||| |||||||||||| || ||| ||||| |||||||||| ||||||||||||||||||||    
T  51684365 tggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcccct 51684464  T
Q  313 ttgc 316  Q
    ||||    
T  51684465 ttgc 51684468  T

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Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 52274968 - 52275063
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||  |||||||||||||||| ||||||||| | ||||||||||||||||    
T  52274968 ggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcc 52275063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 23980567 - 23980465
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccc-cctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||  |||||| ||||||||| ||||||||| ||||||||||||||| || |||||||  | ||||||||||||||||||    
T  23980567 ggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcccctt 23980468  T
Q  314 tgc 316  Q
    |||    
T  23980467 tgc 23980465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 33088718 - 33088616
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgcc-ccctaagatttagcccctt 313  Q
    ||||||||||||||||| || ||  ||| |||||||||||| ||||||| ||| | ||||||||||| |||||||||||| |||||||||||||||||||    
T  33088718 ggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcccctt 33088619  T
Q  314 tgc 316  Q
    |||    
T  33088618 tgc 33088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 7675536 - 7675458
Alignment:
Q  240 taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    ||||||||||||||||| ||||||| || |||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  7675536 taactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctttgc 7675458  T

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Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 43378810 - 43378712
Alignment:
Q  221 taaagtgcactttt-tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||| || | ||||||||||||||||  |||||||  ||||||||||||||||||||||||||| || ||||||||||||| |||||||    
T  43378810 taaagtgcacttttctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgc 43378712  T

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Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 14999276 - 14999361
Alignment:
Q  209 ttttatattggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg 292  Q
    |||||||| |||||||||| |||||| |||| ||||||||||||||||| |||||||  |||||||||||||||| ||||||||||    
T  14999276 ttttatataggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 14999361  T

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Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 7674528 - 7674603
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg 292  Q
    ||||||||||| ||||| |||| ||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||    
T  7674528 ggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttgggccctaagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 11436042 - 11436144
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||  |||||||||||||||| ||||||||||   |||||| ||||| ||||||||| ||||||||||||||| ||| ||    
T  11436042 ggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccatt 11436141  T
Q  314 tgc 316  Q
    |||    
T  11436142 tgc 11436144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 37526975 - 37526877
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    ||||||| |||||| ||||  ||||||||||||||||| ||||||||| |||||| || | |||  ||||||||| |||||||||||||||||||||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccctaagatttagcccctttgc 37526877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 39222577 - 39222472
Alignment:
Q  216 ttggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaat-tttgccccctaagatttagccc 310  Q
    ||||||||||||||||||| ||||   ||||||||||||||||| |||||||| |||||||||| ||||| |||||| || |||| ||||||||| ||||    
T  39222577 ttggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgccc 39222478  T
Q  311 ctttgc 316  Q
     |||||    
T  39222477 atttgc 39222472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 36612853 - 36612954
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    |||||||||||| |||| ||||  ||||||||||||| ||| ||||||||  | |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  36612853 ggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttggatcttaagtacaaaaactacaattttaaccccctaagatttagtcccttt 36612952  T
Q  315 gc 316  Q
    ||    
T  36612953 gc 36612954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 41366231 - 41366130
Alignment:
Q  218 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgccccctaagatttagccccttt 314  Q
    ||||||||||||||||| |||  ||||||||||||||| || |||||| |||||| |||||  ||||  ||||||| |||||||||||||||||||| ||    
T  41366231 ggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaatttagccccctaagatttagccccatt 41366132  T
Q  315 gc 316  Q
    ||    
T  41366131 gc 41366130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 309
Target Start/End: Original strand, 46066523 - 46066617
Alignment:
Q  216 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagcc 309  Q
    |||||| |||||||||||| | ||||||||||||||| |||  ||||| ||||| || ||||||||| |||||||||  ||||||||||||||||    
T  46066523 ttggcttaagtgcacttttcctcctaactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttagcccctaagatttagcc 46066617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 316
Target Start/End: Original strand, 39151921 - 39152033
Alignment:
Q  208 attttatattggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagat 303  Q
    ||||||| | || ||||||||| |||||||||  ||| |||||||||||||||||||||| |||||| ||||||||| |||||||||| | |  ||||||    
T  39151921 attttatttaggttaaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagat 39152020  T
Q  304 ttagcccctttgc 316  Q
    ||| |||||||||    
T  39152021 ttaacccctttgc 39152033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 45157309 - 45157208
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 314  Q
    ||||||||||||||||  |||| ||| ||||||||||||| |||||||| |||||| ||||||||| |||||||||| |||  ||||||||| |||||||    
T  45157309 ggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaaccccttt 45157210  T
Q  315 gc 316  Q
    ||    
T  45157209 gc 45157208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 52276261 - 52276162
Alignment:
Q  221 taaagtgcactttttccc--ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaatta-caattttgccccctaagatttagcccctttgc 316  Q
    |||||||||||||  |||  |||||||||||||| |||||||||||| |||||||||||||||| ||  ||||| | |||||||||||||||||| ||||    
T  52276261 taaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagccccattgc 52276162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 52828168 - 52828069
Alignment:
Q  221 taaagtgcactttttcccct--aactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccc-taagatttagcccctttgc 316  Q
    |||||||||||||| |||||  || ||||||||||||| ||||||||| |||||||||| ||||  ||||||| |||||| |||||||||||||| ||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 52828069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 35067103 - 35067001
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||| ||||||||| |||  ||||||||||| || | ||||||| |||||||||| |||||||| ||||||||||||    
T  35067103 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagcccctt 35067004  T
Q  314 tgc 316  Q
    |||    
T  35067003 tgc 35067001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 52827347 - 52827449
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattt-tgccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||  ||||||||||| ||||  |||||||   ||||||||||||||||||| |    
T  52827347 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccat 52827446  T
Q  314 tgc 316  Q
    |||    
T  52827447 tgc 52827449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 50680335 - 50680433
Alignment:
Q  221 taaagtgcactttttcccct-aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||| |||| ||||| ||||| |||||||||| |||||||| |||||||||| ||||| || |||||| | ||||||||||||| |||||||||    
T  50680335 taaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccctttgc 50680433  T

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Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 25652715 - 25652816
Alignment:
Q  218 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgcccc-ctaagatttagccccttt 314  Q
    ||||||||||||| ||||||  |||| ||||||||||||| |||||||  |||| |||||||||||||| || |||| ||| |||||||||||||| |||    
T  25652715 ggctaaagtgcaccttttccttctaattttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagcccattt 25652814  T
Q  315 gc 316  Q
    ||    
T  25652815 gc 25652816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 44404442 - 44404537
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    ||||||| |||||||||||||   ||||||||||||||| | |||||| ||||| |||||||||||| || |||||| ||||||||| ||||||||    
T  44404442 ggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagcc 44404537  T

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Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 39698563 - 39698657
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagcc 309  Q
    ||||||||||||||||  ||||  ||||||| ||||||||  |||||||||||| |||||||| ||| || ||||||| || |||||||||||||    
T  39698563 ggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttggccactaagatttagcc 39698657  T

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Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 43060084 - 43060013
Alignment:
Q  239 ctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttg-ccccctaagatttagc 308  Q
    |||||||||||||| ||| ||||||| ||||| ||||||||||| |||||||||| |||| |||||||||||    
T  43060084 ctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagc 43060013  T

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Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 7983053 - 7983151
Alignment:
Q  221 taaagtgcactttt-tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||| |||| |||||||||| |||||| |||||||| |||||| |||  ||||  ||||||||| |||||||||||||| |||| ||||    
T  7983053 taaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatccccattgc 7983151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 12390082 - 12389981
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagccccttt 314  Q
    |||||||||||| |||| || |  ||||||||||||| |||  ||||||  |||||| |||||||||||| ||||||| ||||  |||||||||||||||    
T  12390082 ggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccccctagatttagccccttt 12389983  T
Q  315 gc 316  Q
    ||    
T  12389982 gc 12389981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 35595294 - 35595191
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaactt-gtaattttggcccc-taagtacaaaaatta-caattttgccccctaagatttagcccct 312  Q
    |||||||||| |||||| |||||  |||||| |||||||| | ||||||| |||| || ||| ||||| || |||||||| |||||||||||||||||||    
T  35595294 ggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccctaagatttagcccct 35595195  T
Q  313 ttgc 316  Q
    ||||    
T  35595194 ttgc 35595191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 33739093 - 33739147
Alignment:
Q  217 tggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcccct 270  Q
    |||||||| |||| |||||||| ||||||||||||| |||||||||||| |||||    
T  33739093 tggctaaaatgcattttttccctctaactttcaaaagcttgtaattttgacccct 33739147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 7987958 - 7987905
Alignment:
Q  216 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc 269  Q
    ||||| |||||||| |||| ||||||||||||||||| ||  ||||||||||||    
T  7987958 ttggccaaagtgcatttttccccctaactttcaaaaatttacaattttggcccc 7987905  T

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Target: chr2 (Bit Score: 79; Significance: 6e-37; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 13030293 - 13030383
Alignment:
Q  219 gctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaa-ttttgccccctaagatttagc 308  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13030293 gctaaagtgcacttttccccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttttgccccctaagatttagc 13030383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 298
Target Start/End: Complemental strand, 24476947 - 24476862
Alignment:
Q  214 tattggctaaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccct 298  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  24476947 tattggctagagtgcactttttcccccaacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttgacccct 24476862  T

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Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 22588054 - 22587953
Alignment:
Q  218 ggctaaagtgcactttttcccct---aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    |||||||||||| ||||||||||   |||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||    
T  22588054 ggctaaagtgca-tttttcccctcataactttcaaaaacttgcaattttggcccctatgtacaaaaactacaattttggccccttaagatttagcccctt 22587956  T
Q  314 tgc 316  Q
    |||    
T  22587955 tgc 22587953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 22848191 - 22848293
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| || |||||||||||||||||||    
T  22848191 ggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccctt 22848290  T
Q  314 tgc 316  Q
    |||    
T  22848291 tgc 22848293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 38840594 - 38840492
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||| ||||| |||||||||||| ||||||||| |||||||||||||||||||| |    
T  38840594 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagccccat 38840495  T
Q  314 tgc 316  Q
    |||    
T  38840494 tgc 38840492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 311
Target Start/End: Complemental strand, 7899983 - 7899886
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccc 311  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||| |||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  7899983 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcccc 7899886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 18300822 - 18300724
Alignment:
Q  219 gctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    |||||| ||||||||| ||||||||||||| ||||||| ||||||| |||| |||||||||||| |||||||||| ||||||  |||||||||||||||    
T  18300822 gctaaattgcacttttccccctaactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttgacccctataatttagcccctttgc 18300724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 28617926 - 28618023
Alignment:
Q  221 taaagtgcactttttc-ccctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    |||||| || |||||| ||||||||||||||| |||| ||||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||    
T  28617926 taaagtacattttttctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttgccccctaagatttagcccctttgc 28618023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 36449773 - 36449860
Alignment:
Q  213 atattggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccc 297  Q
    |||| ||||||||||||||||| ||||  ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  36449773 atataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgccccc 36449860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 18906088 - 18905995
Alignment:
Q  218 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagc 308  Q
    ||||||||||||||||| |||  |||||||||||||||||| |||||| ||||| |||||||||||| |||||||||  |||||||||||||||    
T  18906088 ggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccctaagatttagc 18905995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 21837066 - 21837124
Alignment:
Q  214 tattggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaa 272  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  21837066 tattggctaaagtgcactttttcctctaactttcaaaaacttgcaattttggcccctaa 21837124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 11258889 - 11258810
Alignment:
Q  239 ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||||| | |||||||||||||||||| ||||    
T  11258889 ctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgc 11258810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 21837354 - 21837303
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc 269  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21837354 ggctaaagtgcactttttcccctaactttcaaaaacttgcaattttggcccc 21837303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 38839242 - 38839344
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    |||||||||||| |||||||||  ||| ||||||||||||| |||||| ||||| ||| |||||||| |||||||||| ||||||||||||||||||| |    
T  38839242 ggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagccccat 38839341  T
Q  314 tgc 316  Q
    |||    
T  38839342 tgc 38839344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 11257622 - 11257723
Alignment:
Q  218 ggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    |||||||||||||||||  ||| |||||||||||||||||| ||||||   ||||||||| ||||| ||||||||| ||| |||||||||||||||| ||    
T  11257622 ggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaaccctaagtataaaaactacaattttggcctcctaagatttagccccatt 11257721  T
Q  315 gc 316  Q
    ||    
T  11257722 gc 11257723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 18299371 - 18299475
Alignment:
Q  216 ttggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccc 311  Q
    ||||||||||||||||||| | ||  ||||||||||||||||  |||||||||| |||||||| ||||| ||||||||| |||||||| ||||||||||     
T  18299371 ttggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagccct 18299470  T
Q  312 tttgc 316  Q
    |||||    
T  18299471 tttgc 18299475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 18797246 - 18797349
Alignment:
Q  218 ggctaaagtgcactttttc---ccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccct 312  Q
    ||||||||||||||||| |   |||||||||||||||||||| ||||||| |||| ||||||  |||| |||||||||| |||||||| |||||||||||    
T  18797246 ggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccct 18797345  T
Q  313 ttgc 316  Q
    ||||    
T  18797346 ttgc 18797349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 18904367 - 18904467
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  |||||||||||||| || |||||||||||| |||||||||||| ||||||||| |  |||||||| ||||||||||    
T  18904367 ggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagcccctt 18904466  T
Q  314 t 314  Q
    |    
T  18904467 t 18904467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 316
Target Start/End: Original strand, 1033212 - 1033311
Alignment:
Q  219 gctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttgcccc-ctaagatttagcccctttgc 316  Q
    ||||||||| |||||| |||| ||||||| ||||||||| ||||||||||||||| ||| ||||||| |||||  |||| ||||||||||||||| ||||    
T  1033212 gctaaagtgtacttttcccccctaacttttaaaaacttgcaattttggcccctaaataccaaaattataatttaacccctctaagatttagccccattgc 1033311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 7898694 - 7898793
Alignment:
Q  221 taaagtgcactttt-tcccct-aactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||| |||||| |||||||||||||||| |||||| ||| |||||||| | ||| |||||||||| ||||||||||||||||||| ||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagccccattgc 7898793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 23869635 - 23869534
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| | ||  ||||||| ||||||||| |||||||||||| ||| |||||||| ||||||||| || |||||||||||||||||||    
T  23869635 ggctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccctt 23869537  T
Q  314 tgc 316  Q
    |||    
T  23869536 tgc 23869534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 32739638 - 32739705
Alignment:
Q  231 tttttcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccc 297  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||| |||||||||| ||||    
T  32739638 tttttcccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggcccc 32739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 18868924 - 18869013
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttgccccctaagatt 304  Q
    |||||||||| |||||| |  |||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||||  ||||||||||    
T  18868924 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttgatccctaagatt 18869013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 26545621 - 26545520
Alignment:
Q  219 gctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgcccc-ctaagatttagccccttt 314  Q
    |||||||||||||||||||  | | ||||||||||| ||| ||||||| ||||| || ||||||||||| ||||||| ||| ||||||||||||||||||    
T  26545621 gctaaagtgcactttttccttcatgactttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagccccttt 26545522  T
Q  315 gc 316  Q
    ||    
T  26545521 gc 26545520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 36451018 - 36450920
Alignment:
Q  221 taaagtgcactttttcccct-aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattt-tgccccctaagatttagcccctttgc 316  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||| |||||||||||| ||| ||||||||  |||||| |||| ||||| |||||||    
T  36451018 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcctttgc 36450920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 41878090 - 41878196
Alignment:
Q  216 ttggctaaagtgcactttttcccct-aactttcaaaaact---tgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||||||  ||||| ||||||||||||||   || |||||||||||| |||||||| ||| ||||||||| ||||| ||||||||||||    
T  41878090 ttggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagcc 41878189  T
Q  310 cctttgc 316  Q
    || ||||    
T  41878190 ccattgc 41878196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 11938889 - 11938808
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccc 297  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||| | |||||||||||||| || ||||||||||||    
T  11938889 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgccccc 11938808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 24475243 - 24475306
Alignment:
Q  235 tcccctaactttcaaaaacttgtaa-ttttggcccctaagtacaaaaattacaattttgccccc 297  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||| ||||    
T  24475243 tcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggcccc 24475306  T

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Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 41879313 - 41879219
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    ||||||||| ||||||||||||  ||| ||||||||||||| |||||||| |||||||||||| ||| |||||||||  |||||||| |||||||    
T  41879313 ggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagc 41879219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 802691 - 802590
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 314  Q
    |||||||||| |||||| |||| ||| ||||||||||||| |||||||| |||||  ||||||||| |||||||||| ||| |||||||||  |||||||    
T  802691 ggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttaccccttt 802592  T
Q  315 gc 316  Q
    ||    
T  802591 gc 802590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 8535752 - 8535655
Alignment:
Q  221 taaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||| ||||||| | ||||||||| |||||||||||||||||  ||  |||||| | ||| |||||||||| |||||||||| |||||||||||||    
T  8535752 taaagtacacttttcctcctaacttttaaaaacttgtaattttgatcctttaagtagagaaactacaattttgaccccctaagaattagcccctttgc 8535655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 1034570 - 1034475
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||||| ||||  |||||||||||||| || |||||||| |||||| |||| ||||  ||||||| | |||||||||||||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagatttagcc 1034475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 22587522 - 22587602
Alignment:
Q  237 ccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||||| ||  |||||||| |||  | |||||||| ||||||||| |||||||||||||||||| ||||||    
T  22587522 ccctaactttcaaaaagttccaattttggtcccctattacaaaaactacaattttggccccctaagatttagcctctttgc 22587602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 13567975 - 13568049
Alignment:
Q  221 taaagtgcactttttccc--ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg 292  Q
    ||||||| |||||| |||  |||| ||||||||||||| |||||||| ||||||| |||||||| ||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttg 13568049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 26544152 - 26544250
Alignment:
Q  221 taaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||||||||   ||||||| ||| ||||| ||  ||||||||  |||||||||||||| |||| |||| ||| ||||||||||||| |||||||    
T  26544152 taaagtgcacttttctacccctaatttttaaaaatttacaattttggttcctaagtacaaaaactacagttttagcctcctaagatttagcacctttgc 26544250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 27553803 - 27553764
Alignment:
Q  277 aaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  27553803 aaaaatgaaaattttgccccctaagatttagcccctttgc 27553764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 810854 - 810780
Alignment:
Q  244 tttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    ||||||||||||| |||||||| |||||  ||||||||| |||||||||| ||| |||||||||  |||||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgc 810780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 22940725 - 22940624
Alignment:
Q  216 ttggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagcccct 312  Q
    ||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  22940725 ttggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgacccctaaaatttagcccct 22940626  T
Q  313 tt 314  Q
    ||    
T  22940625 tt 22940624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 25523069 - 25523171
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||| ||||| |||||||||||| |||||||||| |||||||||||||||||||||    
T  25523069 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccctt 25523168  T
Q  314 tgc 316  Q
    |||    
T  25523169 tgc 25523171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 5962680 - 5962579
Alignment:
Q  209 ttttatattggctaaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagattta 306  Q
    ||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| |||||||||||||||| || |||||| ||| ||||| |||||    
T  5962680 ttttatattggctaaagtgcactttttccactgactttcaaaaatttgtaattttggtcccctaagtacaaaaactataattttagccacctaatattta 5962581  T
Q  307 gc 308  Q
    ||    
T  5962580 gc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 19752912 - 19753013
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||| ||    
T  19752912 ggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccatt 19753011  T
Q  315 gc 316  Q
    ||    
T  19753012 gc 19753013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 28538676 - 28538778
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| | ||  ||||||||||||||||| ||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  28538676 ggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccctt 28538775  T
Q  314 tgc 316  Q
    |||    
T  28538776 tgc 28538778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 18154494 - 18154586
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttgccccctaagatttagc 308  Q
    |||||||||| ||||||| |||  ||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||| |||| |||||||    
T  18154494 ggctaaagtgaacttttttccccttaactttcaaaaacttacaattttgacccctaagtacaaaaactacaattttgccctctaaaatttagc 18154586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 19754232 - 19754129
Alignment:
Q  218 ggctaaagtgcacttttt---cccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccct 312  Q
    |||||||||||| |||||   ||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| |||||||| |||||||||||     
T  19754232 ggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagcccca 19754133  T
Q  313 ttgc 316  Q
    ||||    
T  19754132 ttgc 19754129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 5777901 - 5778001
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 315  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||  ||||||||||| ||||  ||||||| | ||||||||||||||||||| |||    
T  5777901 ggctaaagtgcactttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattg 5778000  T
Q  316 c 316  Q
    |    
T  5778001 c 5778001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 24332916 - 24333015
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||||||||  ||| ||||||||||||| |||||||||||| || ||||||||| |||||||||| ||| |||||||||| |||||||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 24333015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 18487003 - 18486901
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||  ||||  ||||||||||||||||| |||||||| |||||||||| | |||  |||||||| ||||||||||||||||||||||    
T  18487003 ggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccctt 18486904  T
Q  314 tgc 316  Q
    |||    
T  18486903 tgc 18486901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 36486589 - 36486487
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    |||| |||||||||||||||||  ||||||| ||||||||| ||||||| |||| |||||||||||| ||||||||| | |||||||||||||| |||||    
T  36486589 ggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccctt 36486490  T
Q  314 tgc 316  Q
    |||    
T  36486489 tgc 36486487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 33158098 - 33158181
Alignment:
Q  218 ggctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccct 298  Q
    |||||||||||| |||||  ||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||| |||||    
T  33158098 ggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgacccct 33158181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 5778937 - 5778835
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaa-ttttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||  |||||||||||||||| || ||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  5778937 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5778838  T
Q  314 tgc 316  Q
    |||    
T  5778837 tgc 5778835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 7311610 - 7311685
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||||||||| ||| |||||| || ||||||||||| ||||||||| ||||||||||||||||||    
T  7311610 cccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagatttagcc 7311685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 28539901 - 28539819
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||||| ||||||||| ||||||| ||| ||||||||||||| ||||||||| | |||||||||||||| ||||||||    
T  28539901 cccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgc 28539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 309
Target Start/End: Complemental strand, 25056483 - 25056387
Alignment:
Q  217 tggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||||||||| | |  |||||||||||||||||| |||||||  ||||||||||  |||| |||||||||| |||||||||||||||||    
T  25056483 tggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 25056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 1796052 - 1796131
Alignment:
Q  216 ttggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg 292  Q
    |||||||||||||| |||| |  |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||    
T  1796052 ttggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttg 1796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 20214194 - 20214278
Alignment:
Q  216 ttggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccct 298  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||| || | ||| ||||||||| |||||||||| |||||    
T  20214194 ttggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccct 20214278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 2685749 - 2685820
Alignment:
Q  221 taaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt 291  Q
    |||| |||||| || ||||||| |||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  2685749 taaaatgcactattccccctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 16650956 - 16650854
Alignment:
Q  218 ggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    |||||||||||||||||   ||| ||||||| ||||||||| |||||||  |||||||||| ||||| ||||||||| |||||||||| |||||||| ||    
T  16650956 ggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcccatt 16650857  T
Q  314 tgc 316  Q
    |||    
T  16650856 tgc 16650854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 18485138 - 18485247
Alignment:
Q  218 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt--------gccccctaagattta 306  Q
    |||||||||||||||||||||  |||||||| ||||||||| |||||||| ||||||||||  ||||  ||||||||        |||||||||||||||    
T  18485138 ggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgggttttggccccctaagattta 18485237  T
Q  307 gcccctttgc 316  Q
    ||||||||||    
T  18485238 gcccctttgc 18485247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 21835041 - 21835142
Alignment:
Q  218 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagccccttt 314  Q
    ||||||||||||||||  ||| |||| ||| ||||| |||| |||||| |||| || ||||||||| |||||||||| |||||||||||||| |||||||    
T  21835041 ggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttgaccccctaagatttaaccccttt 21835140  T
Q  315 gc 316  Q
    ||    
T  21835141 gc 21835142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 33160387 - 33160291
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg-ccccctaagatttagccc 310  Q
    ||||||||||||||||| ||||  ||| ||||||||||||| |||||| | |||||||||| | ||| |||||||||| |||| |||||||||||||    
T  33160387 ggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttagccc 33160291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 25524157 - 25524097
Alignment:
Q  258 aattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  25524157 aattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgc 25524097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 25524229 - 25524151
Alignment:
Q  218 ggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg 292  Q
    ||||||||||||||||| ||||   ||| ||| ||||| |||||||||||||||| |||||||||||| ||||||||||    
T  25524229 ggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttg 25524151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 36485320 - 36485402
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    ||||||||||| ||||||||  ||||||| || || ||||||||||| || ||||||| |||||||||||||| |||||||||    
T  36485320 cccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttgc 36485402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 42195137 - 42195234
Alignment:
Q  221 taaagtgcactttttcccct-aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgc-cccctaagatttagcccctttgc 316  Q
    |||||||||||||| ||||| |||||| ||||| |||  ||||||||||| || ||||||||  ||||||||||  |||||||||||||||||||||||    
T  42195137 taaagtgcacttttcccccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgc 42195234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 25055406 - 25055514
Alignment:
Q  212 tatattggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttag 307  Q
    ||||| ||||||||||||||||| |||  |||||||| ||   |||| |||||||  |||||| ||| ||||| ||||||||| ||||||||||||||||    
T  25055406 tatataggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttag 25055505  T
Q  308 cccctttgc 316  Q
    ||| |||||    
T  25055506 cccatttgc 25055514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 34893686 - 34893739
Alignment:
Q  237 ccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatt 289  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||    
T  34893686 ccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 5730441 - 5730523
Alignment:
Q  218 ggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgcccc 296  Q
    ||||||||||||||||| ||||   ||||||||||||||||| |||||||||  ||||||||| ||||  ||||||| |||||    
T  5730441 ggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaatttagcccc 5730523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 20216861 - 20216762
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||| ||||  ||| ||||||||||||| |||||| || |||||  |||||||| ||||||||| |||||| |||| ||||||| |||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccatttgc 20216762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 316
Target Start/End: Complemental strand, 42196306 - 42196199
Alignment:
Q  213 atattggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    |||| ||||||||||||||||  ||||  ||||||| ||||| |||| | |||||||| ||| ||||||||| |||| |||| | |||||||||||||||    
T  42196306 atataggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagc 42196207  T
Q  309 ccctttgc 316  Q
    || |||||    
T  42196206 ccatttgc 42196199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 316
Target Start/End: Original strand, 16650043 - 16650094
Alignment:
Q  266 cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||||| |||||||||| ||| |||||||||| |||||||||    
T  16650043 cccctaagtacaaaaactacaattttgaccctctaagatttaacccctttgc 16650094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 40255773 - 40255671
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||   ||| ||| ||||||||| ||||||| |||| ||| |||| ||| |||||||||| |||||||||||||| |||| |    
T  40255773 ggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaaccccat 40255674  T
Q  314 tgc 316  Q
    |||    
T  40255673 tgc 40255671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 1016949 - 1016863
Alignment:
Q  231 tttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    |||| ||||||| ||| ||||| |||||||||||| |  ||| ||||||||| |||||||||| | ||||||| ||||| |||||||    
T  1016949 ttttccccctaatttttaaaaaattgtaattttggtcttctatgtacaaaaactacaattttgactcctaagaattagctcctttgc 1016863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 29932799 - 29932698
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 314  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  29932799 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccctaagtacaaaaactacaattttgaccccttaagatttagtcccttt 29932700  T
Q  315 gc 316  Q
    ||    
T  29932699 gc 29932698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 29981953 - 29981852
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 314  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  29981953 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccctaagtacaaaaactacaattttgaccccttaagatttagtcccttt 29981854  T
Q  315 gc 316  Q
    ||    
T  29981853 gc 29981852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 12703600 - 12703499
Alignment:
Q  218 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||| ||    
T  12703600 ggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccatt 12703501  T
Q  315 gc 316  Q
    ||    
T  12703500 gc 12703499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 54540891 - 54540789
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  54540891 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccctt 54540792  T
Q  314 tgc 316  Q
    |||    
T  54540791 tgc 54540789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 7758402 - 7758503
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||| |||| |||||||||||| ||||||||| ||||||||||||||| ||||||    
T  7758402 ggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccctt 7758501  T
Q  314 tg 315  Q
    ||    
T  7758502 tg 7758503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 12700175 - 12700268
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||| |||||||||    
T  12700175 ggctaaagtgcactttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagcc 12700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 316
Target Start/End: Original strand, 47614181 - 47614287
Alignment:
Q  214 tattggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||||||||||  ||||  |||||||| ||||||||||||||||||    
T  47614181 tattggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcc 47614280  T
Q  310 cctttgc 316  Q
     ||||||    
T  47614281 tctttgc 47614287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 8456479 - 8456572
Alignment:
Q  219 gctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||    
T  8456479 gctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcc 8456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 7267647 - 7267738
Alignment:
Q  221 taaagtgcactttttcccct-aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||| |||||||||||| ||| ||||||||| ||||||||||||||||||    
T  7267647 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcc 7267738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 29931226 - 29931328
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaa-ttttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |  |||||||||||||||||||| || ||||| ||||||| |||||||| ||||||||| ||||||||||||||| ||||||    
T  29931226 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctt 29931325  T
Q  314 tgc 316  Q
    |||    
T  29931326 tgc 29931328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 29980380 - 29980482
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaa-ttttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |  |||||||||||||||||||| || ||||| ||||||| |||||||| ||||||||| ||||||||||||||| ||||||    
T  29980380 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctt 29980479  T
Q  314 tgc 316  Q
    |||    
T  29980480 tgc 29980482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 534499 - 534594
Alignment:
Q  218 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||||||||  |||||| ||||||||||| ||||||| || |||| ||||||||| ||||||||| ||||||||||||||||||    
T  534499 ggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcc 534594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 316
Target Start/End: Complemental strand, 22776918 - 22776811
Alignment:
Q  213 atattggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    |||| ||||||||||||||||| |  |||||||||||| ||| ||| |||||||| |||||| ||||||||| ||||||||| ||||||||||| |||||    
T  22776918 atataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagc 22776819  T
Q  309 ccctttgc 316  Q
    ||||||||    
T  22776818 ccctttgc 22776811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 222 - 317
Target Start/End: Original strand, 24516464 - 24516563
Alignment:
Q  222 aaagtgcactttttcccc--taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgct 317  Q
    ||||||||||||||||||  ||||||| ||||||||| ||||||||| ||||||||| ||||| ||||||||| ||||| ||||||||||| ||||||||    
T  24516464 aaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcctttgct 24516563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 51037534 - 51037637
Alignment:
Q  216 ttggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagcccct 312  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| ||||||| ||| ||| | ||||||| ||||||||| ||||||||||| |||||||||    
T  51037534 ttggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagcccct 51037633  T
Q  313 ttgc 316  Q
    ||||    
T  51037634 ttgc 51037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 51469966 - 51470074
Alignment:
Q  212 tatattggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattt-tgccccctaagatttag 307  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||||||| |||||||| ||||||||||| ||||  |||||||   |||||||||||||||    
T  51469966 tatattggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttag 51470065  T
Q  308 cccctttgc 316  Q
    |||| ||||    
T  51470066 ccccattgc 51470074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 52840707 - 52840603
Alignment:
Q  216 ttggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttg-ccccctaagatttagcccc 311  Q
    ||||||||||||| |||||  |||||||||||||||||||||| ||||||||| |||||| ||  ||||  ||||||||| |||||||||||||||||||    
T  52840707 ttggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagcccc 52840608  T
Q  312 tttgc 316  Q
     ||||    
T  52840607 attgc 52840603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 47610678 - 47610579
Alignment:
Q  221 taaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| ||||    
T  47610678 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 47610579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 19984849 - 19984951
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||| ||||||||||||| |||||||| |||||| ||||||||| |||||||||| |||  ||||||||| ||||||    
T  19984849 ggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 19984948  T
Q  314 tgc 316  Q
    |||    
T  19984949 tgc 19984951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 7268924 - 7268826
Alignment:
Q  221 taaagtgcactttttcccc-taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||| |||||||| | ||| ||||||||| ||| |||||||||||| ||| ||||    
T  7268924 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtcccattgc 7268826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 55192072 - 55191994
Alignment:
Q  240 taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgccccct-aagatttagcccctttgc 316  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||| ||||| |||| ||| |||||||||    
T  55192072 taactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctttgc 55191994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 5029783 - 5029680
Alignment:
Q  218 ggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaa-ttttgccccctaagatttagccccttt 314  Q
    |||||||||||||||||  |||||| ||||||||| |||| |||||||||| ||||||||| ||||  |||| |||| |||||||||| |||||||| ||    
T  5029783 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagccccatt 5029684  T
Q  315 gctt 318  Q
    ||||    
T  5029683 gctt 5029680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 11671441 - 11671342
Alignment:
Q  218 ggctaaagtgcactttttcc-cctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattaca-attttgccccctaagatttagccccttt 314  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| | ||||||| || ||||| |||| ||||  ||||||| |||||| |||||||    
T  11671441 ggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaaccccttt 11671342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 306
Target Start/End: Original strand, 52104484 - 52104569
Alignment:
Q  221 taaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagattta 306  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||  |||| ||||||||| || |||||| ||| |||||||||||    
T  52104484 taaaatgcacttttccccctaactttcaaaaagttgtaattttgg-tcctatgtacaaaaactataattttggccacctaagattta 52104569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 535885 - 535787
Alignment:
Q  216 ttggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccc 310  Q
    |||||||||||| |||||| |  |||||||||||||||||||| |||||||| ||| ||||||  |||| || ||||||  ||||||||||||||||||    
T  535885 ttggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagccc 535787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 19986173 - 19986069
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcc---cctaagtacaaaaattacaattttg-ccccctaagatttagcccc 311  Q
    ||||||||||||||||| |||   ||| ||||||||||||| ||||||||||   |||| ||| ||||| |||||||||| ||| |||||||||| ||||    
T  19986173 ggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaacccc 19986074  T
Q  312 tttgc 316  Q
    |||||    
T  19986073 tttgc 19986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 46721321 - 46721219
Alignment:
Q  218 ggctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    |||||||||||||||||   ||||||||||| ||||| |||  |||||  |||| || ||||||||| ||||||||| | ||||||||||||||||||||    
T  46721321 ggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccctt 46721222  T
Q  314 tgc 316  Q
    |||    
T  46721221 tgc 46721219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 47609697 - 47609799
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattt-tgccccctaagatttagcccctt 313  Q
    ||||||| ||||||||| ||||  ||||||||||||||||| |||||||  ||||||||||| ||||  |||||||   ||||||||||||||||||| |    
T  47609697 ggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccat 47609796  T
Q  314 tgc 316  Q
    |||    
T  47609797 tgc 47609799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 54539755 - 54539849
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg-ccccctaagatttagc 308  Q
    ||||||||||||||||| | ||  ||||||||||||||||| ||||||   ||||||| |||||||| ||||||||||  |||||||||||||||    
T  54539755 ggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagc 54539849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 47615649 - 47615596
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc 269  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  47615649 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggcccc 47615596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 53901489 - 53901407
Alignment:
Q  216 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccc 297  Q
    ||||||||||||||||||| ||||||| ||| ||||| ||| ||||||| | || |||||||||||| |||||| ||| ||||    
T  53901489 ttggctaaagtgcacttttccccctaagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggcccc 53901407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 51470555 - 51470462
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttgc-cccctaagatttagc 308  Q
    |||||||||||||| || |||| ||||||||||||||||| ||||| |  ||||||||||| ||||  ||||||| || |||||||||||||||    
T  51470555 ggctaaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagatttagc 51470462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 54987103 - 54987006
Alignment:
Q  221 taaagtgcactttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||| ||||||| ||||||||| |||  ||||| | |||||| ||| ||||| || ||||||| ||| |||||||||||| |||||||    
T  54987103 taaagtgcacttttccccctaagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcctttgc 54987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 5001200 - 5001275
Alignment:
Q  218 ggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattt 290  Q
    |||||||||||||||||  ||||||| ||||||||| |||| |||||||| ||||||||||| ||||  |||||||    
T  5001200 ggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 6170296 - 6170348
Alignment:
Q  240 taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaatttt 291  Q
    ||||||||||||||||| |||||||  |||| |||||||||||||||||||||    
T  6170296 taactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttt 6170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 10584078 - 10584039
Alignment:
Q  277 aaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  10584078 aaaaattaaaatttggccccctaagatttagcccctttgc 10584039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 316
Target Start/End: Original strand, 31645000 - 31645075
Alignment:
Q  243 ctttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||  |||||||| ||||||||| |||||| |||||||||  || ||||||||||||||| |||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgc 31645075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 52839037 - 52839139
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgcccc-ctaagatttagcccctt 313  Q
    |||||||||||| |||| |||||  ||||| |||||| ||||||||||| ||| |||||||| ||||  |||||||| |||| |||| |||||||||| |    
T  52839037 ggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagccccat 52839136  T
Q  314 tgc 316  Q
    |||    
T  52839137 tgc 52839139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 34019241 - 34019152
Alignment:
Q  221 taaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    |||||| || |||| ||| ||||||||||||||||| |||||||  |||||| ||||||| | ||||||||| | ||||||| |||||||    
T  34019241 taaagtacatttttccccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagc 34019152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 49216245 - 49216341
Alignment:
Q  216 ttggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagc 308  Q
    |||||||||||||||||||   | ||||| ||||||||| ||| |||||||  |||||| ||||||||| ||||||| || |||| |||||||||||    
T  49216245 ttggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagc 49216341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 6171319 - 6171251
Alignment:
Q  239 ctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagattta 306  Q
    |||| ||| ||||| |||| ||||||||||||| ||||||||| || ||||||| ||| ||||||||||    
T  6171319 ctaagttttaaaaaattgtgattttggcccctatgtacaaaaactataattttgaccctctaagattta 6171251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 6249633 - 6249701
Alignment:
Q  240 taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgccccctaagatttag 307  Q
    ||||||||||||||||| ||||||   |||| ||||||||||| |||||||||  ||| ||||||||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaattttatcccttaagatttag 6249701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 23770450 - 23770406
Alignment:
Q  273 gtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||    
T  23770450 gtacaaaaactacaattttagccccctaagatttaacccctttgc 23770406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 315
Target Start/End: Complemental strand, 40426877 - 40426778
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaag-tacaaaaattacaatttt-gccccctaagatttagcccctttg 315  Q
    |||||||||||||| ||||  ||||||| ||||| ||| || ||| ||||||| |  |||||||||||||||||| |||||||| |||||||| ||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgatttagctcctttg 40426778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 46719940 - 46720043
Alignment:
Q  217 tggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccct 312  Q
    ||||||||||||| |||| ||||  ||||||| ||||| |||  ||||||||||| || ||| ||||| ||||||||| | || |||||||||||||| |    
T  46719940 tggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccat 46720039  T
Q  313 ttgc 316  Q
    ||||    
T  46720040 ttgc 46720043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 7314878 - 7314981
Alignment:
Q  216 ttggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccct 312  Q
    ||||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||  ||||  ||||||||| ||||||||||||||||||||    
T  7314878 ttggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccctaagtatcaaaacaacaattttgaccccctaagatttagcccct 7314977  T
Q  313 ttgc 316  Q
    ||||    
T  7314978 ttgc 7314981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 1829706 - 1829602
Alignment:
Q  216 ttggctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccc 311  Q
    |||| |||||||||||||||  ||||||||||| ||||||||| ||||||| |||| |||||| ||||| |||||||||| |||||||||||||||||||    
T  1829706 ttggttaaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccc 1829607  T
Q  312 tttgc 316  Q
    |||||    
T  1829606 tttgc 1829602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 16703568 - 16703666
Alignment:
Q  216 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||||| |||||| |||||||||||||| |||||||  || ||| |||||||| ||||||||| ||||||||| ||||| ||||||    
T  16703568 ttggctaaagtgcacttttccccctatctttcaaaaacttgcaattttgatccataaatacaaaaactacaattttagccccctaaaatttaacccctt 16703666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 30495799 - 30495696
Alignment:
Q  216 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg--ccccctaagatttagcccct 312  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||   |||||| |||||||||| |||||||||  ||| |||||||||||||| |    
T  30495799 ttggctaaagtgcactttttcccctaactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccctctaagatttagcccat 30495700  T
Q  313 ttgc 316  Q
    ||||    
T  30495699 ttgc 30495696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 8659265 - 8659367
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  8659265 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 8659364  T
Q  314 tgc 316  Q
    |||    
T  8659365 tgc 8659367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 8660304 - 8660211
Alignment:
Q  218 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagc 308  Q
    ||||||||||||||||| |||  |||||||||||||||||| ||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||    
T  8660304 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacccctaagtaccaaaaccacaatttagcccccctaagatttagc 8660211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 8821873 - 8821967
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagc 308  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||    
T  8821873 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 8821967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 16704598 - 16704496
Alignment:
Q  218 ggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    |||||||||||||||||  |||| ||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||  ||  |||||||||||| |||    
T  16704598 ggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctctt 16704499  T
Q  314 tgc 316  Q
    |||    
T  16704498 tgc 16704496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 27322168 - 27322065
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccc-taagatttagccccttt 314  Q
    ||||||||||||||||| |||| || ||||||||| |||| |||||||||||| ||||||| ||||  |||||||| ||||| ||||| |||||||||||    
T  27322168 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagccccttt 27322069  T
Q  315 gctt 318  Q
    ||||    
T  27322068 gctt 27322065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 310
Target Start/End: Complemental strand, 8822898 - 8822798
Alignment:
Q  214 tattggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||||||||| || ||  |||||||||||||||| |||||||  ||||||||||| ||||  ||||||| | |||||||||||||||||    
T  8822898 tattggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 8822799  T
Q  310 c 310  Q
    |    
T  8822798 c 8822798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 10784592 - 10784695
Alignment:
Q  218 ggctaaagtgcactttt---tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccct 312  Q
    |||||||||||||||||   |||| ||||||| ||||||||| ||||||  |||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  10784592 ggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccct 10784691  T
Q  313 ttgc 316  Q
    ||||    
T  10784692 ttgc 10784695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 26575150 - 26575053
Alignment:
Q  221 taaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||   | |||||||||||||||||| ||||||  |||| |||||||||||| ||||||||| ||||||||||||||| | |||||||    
T  26575150 taaagtgcactttcctctctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgc 26575053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 7316395 - 7316293
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccct-aagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||||||| ||| ||   |||  ||||||||| ||||| |||||||||||||||    
T  7316395 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcccctt 7316296  T
Q  314 tgc 316  Q
    |||    
T  7316295 tgc 7316293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 14823677 - 14823583
Alignment:
Q  218 ggctaaagtgcacttttt---cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttag 307  Q
    ||||||||||||||||||   ||| ||| ||| ||||||||| |||||| ||||| |||||||| ||| ||||||||| ||||||||||||||||    
T  14823677 ggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttag 14823583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 3721612 - 3721714
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||  ||||||||||| ||||  | ||||| | |||| |||||||||||||| |    
T  3721612 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagccccat 3721711  T
Q  314 tgc 316  Q
    |||    
T  3721712 tgc 3721714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 12350823 - 12350898
Alignment:
Q  241 aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 315  Q
    |||||| | ||||||| ||||||| |||||| ||| ||||| |||||||||  |||||||||||||||||||||||    
T  12350823 aactttaataaacttgcaattttgacccctatgtataaaaactacaattttaaccccctaagatttagcccctttg 12350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 27318315 - 27318420
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattt---tgccccctaagatttagcccct 312  Q
    ||||||||||||| |||||||| || ||||||||| |||| |||||||| ||||||||||| ||||  |||||||     |||||||||| |||||||||    
T  27318315 ggctaaagtgcaccttttccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttcccccccccctaagaattagcccct 27318414  T
Q  313 ttgctt 318  Q
    ||||||    
T  27318415 ttgctt 27318420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 3722608 - 3722527
Alignment:
Q  218 ggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgcccc 296  Q
    ||||||||||||||||| ||  ||||||||||||||||||| ||||||| ||| |||||||| ||||  ||||||| |||||    
T  3722608 ggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccc 3722527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 10785994 - 10785912
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||||| ||||| ||| ||||||  |||| |||||||||||| |||||||||  |||| |||||||||||||||||||    
T  10785994 cccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgc 10785912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 14822360 - 14822453
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttag 307  Q
    ||||| |||||||||||  |||  ||| ||||||||||||| |||||||||||| |||||| | ||| ||||||||| ||||||||||||||||    
T  14822360 ggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttag 14822453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 26574642 - 26574720
Alignment:
Q  239 ctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    |||||||||||||||||| |||||||  || ||||||||||||| |||| |||   ||| |||||||||||||||||||    
T  26574642 ctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactacattttgatcccttaagatttagcccctttgc 26574720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 27437828 - 27437930
Alignment:
Q  218 ggctaaagtgcactttt-tcccct-aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||| |||||| ||||| ||| |||||||||||| ||   | ||||| |||||||||| |||||||||||||||| ||||    
T  27437828 ggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctt 27437927  T
Q  314 tgc 316  Q
    |||    
T  27437928 tgc 27437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 17496817 - 17496900
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg--ccccctaagatttagcccctttgc 316  Q
    ||||||||||||||||||||  ||||||  ||| ||||||||||||| | ||||||||  |||||||||||||| || ||||||    
T  17496817 cccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaacctctttgc 17496900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 22418950 - 22418894
Alignment:
Q  260 ttttggcccctaagtacaaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    ||||| |||||||  | |||||| | |||||||||||||||||||||||||||||||    
T  22418950 ttttgtcccctaataaaaaaaatgaaaattttgccccctaagatttagcccctttgc 22418894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 34834677 - 34834578
Alignment:
Q  221 taaagtgcactttttcc--cctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||| ||  ||||||||||||||||||| |||||||  | ||||||||  ||||  ||||||| | ||||||||||||||||||| ||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagccccattgc 34834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 6842384 - 6842308
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt 291  Q
    ||||||||||||||||| |||||  || ||||||||| ||| |||||||| |||||| || |||||| |||||||||    
T  6842384 ggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 6840194 - 6840294
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttg 315  Q
    |||| |||||||||||  ||| ||| ||||||||| |||  ||||||||||| ||| |||||||| || ||||||| ||| ||||||||||  |||||||    
T  6840194 ggctgaagtgcactttcccccttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttgaccctctaagatttaatccctttg 6840293  T
Q  316 c 316  Q
    |    
T  6840294 c 6840294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 26949268 - 26949210
Alignment:
Q  231 tttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt 291  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||| ||||| |||||||||    
T  26949268 tttttcccttaactttcaaaaa-ttgcaattttg-cccctaagtataaaaactacaatttt 26949210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 218 - 312
Target Start/End: Complemental strand, 49308127 - 49308031
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagcccct 312  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||||| ||||||    
T  49308127 ggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgccccctatgattttgcccct 49308031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 35934347 - 35934444
Alignment:
Q  221 taaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| | |||||| |||||| ||||| |||||||||||||| ||||    
T  35934347 taaagtgcacttttccccctaactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccccattgc 35934444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 316
Target Start/End: Complemental strand, 31601095 - 31600984
Alignment:
Q  209 ttttatattggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatt 304  Q
    |||||| |||||||||||||||||||||||  |||||||| ||||||||| |||||||  |||||||||||||||| |||||||||| |||| |||||||    
T  31601095 ttttattttggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatt 31600996  T
Q  305 tagcccctttgc 316  Q
    |||||| |||||    
T  31600995 tagcccatttgc 31600984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 1290299 - 1290197
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  |||||||||||| |||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  1290299 ggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccctt 1290200  T
Q  314 tgc 316  Q
    |||    
T  1290199 tgc 1290197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 8155741 - 8155839
Alignment:
Q  221 taaagtgcactttttcccctaactttcaaaaacttgtaattttgg--cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |  ||||||||| |||||| ||||||||| |||||||||||||||||| ||||||    
T  8155741 taaagtgcacttttccccctaactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttgc 8155839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 17382988 - 17383094
Alignment:
Q  213 atattggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||| ||||||||| |||||| |||| ||| ||    
T  17382988 atataggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatcc 17383087  T
Q  310 cctttgc 316  Q
    |||||||    
T  17383088 cctttgc 17383094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 1835203 - 1835101
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||  ||||||||||  |||| |||||||||| |||||||||||||||||||||    
T  1835203 ggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 1835104  T
Q  314 tgc 316  Q
    |||    
T  1835103 tgc 1835101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 1963196 - 1963298
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||| ||| |||||||||| |||| ||||||||| ||||||||| ||||||||||| ||||||||||    
T  1963196 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccctt 1963295  T
Q  314 tgc 316  Q
    |||    
T  1963296 tgc 1963298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 19750673 - 19750574
Alignment:
Q  220 ctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||||||||| |||| ||||||| ||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19750574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 19789133 - 19789232
Alignment:
Q  220 ctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||||||||| |||| ||||||| ||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19789232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 26421722 - 26421627
Alignment:
Q  218 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagccc 310  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||||| || |||||||||||||| |||||||||| |||| |||||||||||||    
T  26421722 ggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttagccc 26421627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 31599789 - 31599891
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    |||| |||||||||||||||||  ||||||| ||||||||| ||||||| |||| |||||||||||| ||||||||| | ||||||||||||||||||||    
T  31599789 ggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccctt 31599888  T
Q  314 tgc 316  Q
    |||    
T  31599889 tgc 31599891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 10471492 - 10471387
Alignment:
Q  215 attggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccc 310  Q
    |||||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||    
T  10471492 attggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 10471393  T
Q  311 ctttgc 316  Q
    | ||||    
T  10471392 cattgc 10471387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 12129626 - 12129725
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||| |||   ||||||||||||||||| |||||||||||| |||||||||||| |||||||||| |||| ||||||||||||| |||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 10470546 - 10470648
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||| ||| |||||||| ||||| ||||||| | ||||||||||||||||||| |    
T  10470546 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagccccat 10470645  T
Q  314 tgc 316  Q
    |||    
T  10470646 tgc 10470648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 17388311 - 17388212
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||| ||| ||||||||| |||||| |||| |||||||||||    
T  17388311 ggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagccccttt 17388212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 25685923 - 25685821
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  25685923 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagccccat 25685824  T
Q  314 tgc 316  Q
    |||    
T  25685823 tgc 25685821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 5526226 - 5526125
Alignment:
Q  218 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 314  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||  ||||  ||||||| | ||||||||||||||||||| ||    
T  5526226 ggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagccccatt 5526127  T
Q  315 gc 316  Q
    ||    
T  5526126 gc 5526125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 8757675 - 8757776
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||| | |||||||||||| ||| ||||||||| | ||| |||||||||||||| ||    
T  8757675 ggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagccccatt 8757774  T
Q  315 gc 316  Q
    ||    
T  8757775 gc 8757776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 25684933 - 25685036
Alignment:
Q  217 tggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccct 312  Q
    |||||||||||||||||| ||||  ||||||||||||||||| ||||||| ||| |||||||| ||||  ||||||| | |||||||||||||||||||     
T  25684933 tggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagcccca 25685032  T
Q  313 ttgc 316  Q
    ||||    
T  25685033 ttgc 25685036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 49306775 - 49306854
Alignment:
Q  218 ggctaaagtgcacttttt-cccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttgccc 295  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||||   |||||||||||| |||||||||||||    
T  49306775 ggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttgccc 49306854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 33310189 - 33310088
Alignment:
Q  216 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||| || |||||| |||||||| || |||||| |||| ||| ||||||||| |||    
T  33310189 ttggctaaagtgcacttttttcc-taacttttaaaaacttgtaattttagctccctaaatacaaaaactataattttggccctctatgatttagcctctt 33310091  T
Q  314 tgc 316  Q
    |||    
T  33310090 tgc 33310088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 48781146 - 48781045
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 314  Q
    ||||||||||||||||| |||||  |||||||||||| ||| |||||||| |||||||||| ||||  ||||||| | |||||||| |||||||||| ||    
T  48781146 ggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggtccctaagtactaaaaccacaatttagcccccctaaaatttagccccatt 48781047  T
Q  315 gc 316  Q
    ||    
T  48781046 gc 48781045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 13386634 - 13386531
Alignment:
Q  218 ggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccct 312  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||| |||| ||||||| ||||  ||||||| | ||||||||||| |||||||     
T  13386634 ggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagcccca 13386535  T
Q  313 ttgc 316  Q
    ||||    
T  13386534 ttgc 13386531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 8758935 - 8758844
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    |||| ||||||||| ||||  ||||||||||||||||| |||||||| |||||||||||| ||| ||||||||| ||||| |||||||||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagc 8758844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 1834117 - 1834222
Alignment:
Q  216 ttggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg--ccccctaagatttagccc 310  Q
    ||||||||||||||||||| |||  |||||||| ||||||||  |||||||  |||||| ||| ||||| ||||||||||  ||||||||||||||||||    
T  1834117 ttggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagccc 1834216  T
Q  311 ctttgc 316  Q
     |||||    
T  1834217 atttgc 1834222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 48780248 - 48780350
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||| ||||||||| |||||||  ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  48780248 ggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 48780347  T
Q  314 tgc 316  Q
    |||    
T  48780348 tgc 48780350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 5525379 - 5525461
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    ||||||||||||||||||||| |||||||  ||||||||||| ||||  ||||||| | ||||||||||||||||||| ||||    
T  5525379 cccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 5525461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 14868890 - 14868992
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgccccctaagatttagcccctttg 315  Q
    ||||||||||||||||| |||| || ||||||||| |||| ||||||||||| |||||||  ||||  |||||||  |||||||||| |||||||| |||    
T  14868890 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaattagccccattg 14868989  T
Q  316 ctt 318  Q
    |||    
T  14868990 ctt 14868992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 14877044 - 14876942
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgccccctaagatttagcccctttg 315  Q
    ||||||||||||||||| |||| || ||||||||| |||| ||||||||||| |||||||  ||||  |||||||  |||||||||| |||||||| |||    
T  14877044 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaattagccccattg 14876945  T
Q  316 ctt 318  Q
    |||    
T  14876944 ctt 14876942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 46638802 - 46638724
Alignment:
Q  240 taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||||||| ||| |||||||  |||||| | ||||||||||||||||| |||||||||||||||| ||||||||    
T  46638802 taactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagccccctaagatttagtccctttgc 46638724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 10447006 - 10447109
Alignment:
Q  218 ggctaaagtgcactttttcccct---aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgcccc-ctaagatttagcccct 312  Q
    ||||||||||||||||| |||||   || ||||||||| ||| |||||| ||||| || |||||||||  |||||||| |||| ||||||||||||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccct 10447105  T
Q  313 ttgc 316  Q
    ||||    
T  10447106 ttgc 10447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 13509459 - 13509358
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgc-cccctaagatttagccccttt 314  Q
    |||||||||| |||||| |||| ||||||| ||||| ||| ||||||||||||  |||||  |||| ||||||||||  |||||||||||||||||||||    
T  13509459 ggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagccccttt 13509360  T
Q  315 gc 316  Q
    ||    
T  13509359 gc 13509358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 50909776 - 50909671
Alignment:
Q  216 ttggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttg--ccccctaagatttagccc 310  Q
    |||||||||||||||||||||  |||||| ||| ||||| |||  |||||| | ||||| ||| ||||| ||||||||||  |||| |||||||||||||    
T  50909776 ttggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagccc 50909677  T
Q  311 ctttgc 316  Q
    ||||||    
T  50909676 ctttgc 50909671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 52491708 - 52491606
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    |||||||||| |||||| | ||  ||||||||||||||||| |||||||| || |||| |||| ||| ||||||||| ||||||||| |||||||||| |    
T  52491708 ggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagccccat 52491609  T
Q  314 tgc 316  Q
    |||    
T  52491608 tgc 52491606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 21539140 - 21539070
Alignment:
Q  248 aaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    ||||||||| |||||||||| |||||||  ||||| |||||||||| |||||||||||||||| |||||||    
T  21539140 aaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgc 21539070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 35935631 - 35935539
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||  ||||  ||||||| ||||| ||| |||||| ||||| |||||||| ||| ||||||||| ||||||||||||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcc 35935539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 26420342 - 26420390
Alignment:
Q  243 ctttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt 291  Q
    |||||||||||||| |||||||| ||||||||| |||||||| ||||||    
T  26420342 ctttcaaaaacttgcaattttggtccctaagtataaaaattataatttt 26420390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 316
Target Start/End: Complemental strand, 10448342 - 10448259
Alignment:
Q  235 tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgcccc-ctaagatttagcccctttgc 316  Q
    |||||||| ||||||||| |||  ||||| ||||| || ||||||||| |||||||||| ||| ||||||| ||||||||||||    
T  10448342 tcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccctttgc 10448259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 13386014 - 13386111
Alignment:
Q  218 ggctaaagtgcactttttccc--ctaactttc-aaaaacttgtaattttgg-cccctaagtacaaaaattacaatt--ttgccccctaagatttagcc 309  Q
    ||||||||||||||||| |||  ||||||||| ||||||||| |||||||| ||||||||||| ||||  ||||||  |  |||||||||||||||||    
T  13386014 ggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcc 13386111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 33997892 - 33997853
Alignment:
Q  277 aaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  33997892 aaaaatgaaaattttgccccctaagatttagcccctttgc 33997853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 55603628 - 55603585
Alignment:
Q  221 taaagtgcactttttcccct-aactttcaaaaacttgtaatttt 263  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  55603628 taaagtgcactttttccccttaactttcaaaaacttgcaatttt 55603585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 21178016 - 21178098
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    ||||||||||||| ||| ||| |||||||  |||||| | ||||||| |||||||||| |||||||| ||||||||| |||||    
T  21178016 cccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcccttttgc 21178098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 5513976 - 5514083
Alignment:
Q  212 tatattggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagc 308  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||||  |||||||||||| |||||||||||| |||||||||| |||||||| |||||||    
T  5513976 tatataggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagc 5514075  T
Q  309 ccctttgc 316  Q
    ||||||||    
T  5514076 ccctttgc 5514083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 10006341 - 10006446
Alignment:
Q  215 attggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccc 310  Q
    |||||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||  ||||  |||||||| |||||||||||||||||||    
T  10006341 attggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagccc 10006440  T
Q  311 ctttgc 316  Q
    ||||||    
T  10006441 ctttgc 10006446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 12353460 - 12353360
Alignment:
Q  218 ggctaaagtgcactttttcccct-aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||| ||||||||||| |||| || |||||| |||||||||||||||||||| ||    
T  12353460 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggccccctaagatttagccccatt 12353362  T
Q  315 gc 316  Q
    ||    
T  12353361 gc 12353360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 22221465 - 22221365
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||  ||||||||||  |||| |||||||||| |||||||||||||||||||||    
T  22221465 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 22221366  T
Q  314 t 314  Q
    |    
T  22221365 t 22221365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 22227807 - 22227707
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||  ||||||||||  |||| |||||||||| |||||||||||||||||||||    
T  22227807 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 22227708  T
Q  314 t 314  Q
    |    
T  22227707 t 22227707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 1824156 - 1824084
Alignment:
Q  239 ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  1824156 ctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagcc 1824084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 1858601 - 1858529
Alignment:
Q  239 ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  1858601 ctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagcc 1858529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 8388464 - 8388564
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttg 315  Q
    ||||||||||||||||  ||||||||||| ||||| ||| |||||| | |||||| ||||||||| || |||||| ||||||||||||||||||||||||    
T  8388464 ggctaaagtgcactttcccccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctttg 8388563  T
Q  316 c 316  Q
    |    
T  8388564 c 8388564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 32207424 - 32207324
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttg 315  Q
    ||||||||||||||||  |||||||| |||||||||||| ||||||| | ||||||||||||||| ||||||||| ||| | |||||||||||| |||||    
T  32207424 ggctaaagtgcactttcccccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctttg 32207325  T
Q  316 c 316  Q
    |    
T  32207324 c 32207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 10007864 - 10007762
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||| |||||||||| | |||  |||||||| | ||||||||||||||||||||    
T  10007864 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcccctt 10007765  T
Q  314 tgc 316  Q
    |||    
T  10007764 tgc 10007762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 30335639 - 30335741
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    |||||||||||| |||| | ||  ||||||| ||||||||| ||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||    
T  30335639 ggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcccctt 30335738  T
Q  314 tgc 316  Q
    |||    
T  30335739 tgc 30335741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 18978039 - 18978121
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||||| |||  |||||||||||| |||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  18978039 cccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgc 18978121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 24123975 - 24123897
Alignment:
Q  240 taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||||||||||| |||||||||| | ||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  24123975 taactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgc 24123897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 29968434 - 29968336
Alignment:
Q  221 taaagtgcactttttcccct-aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatt-ttgccccctaagatttagcccctttgc 316  Q
    |||||||||||||| ||||| |||||| ||||||||| |||||||| |||||||||||||||| ||||||| | | |||||||||||||||||| ||||    
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagccccattgc 29968336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 11287774 - 11287878
Alignment:
Q  216 ttggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagcccc 311  Q
    |||| ||||||||||||||||  |||||||||| ||||||||| ||||||||||| ||||||||| ||| ||||||||| ||||||||||| ||| | ||    
T  11287774 ttggataaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcc 11287873  T
Q  312 tttgc 316  Q
    |||||    
T  11287874 tttgc 11287878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 11282011 - 11282110
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||||||||  ||||||| ||||| ||| |||||||||||| ||  ||||||||| ||||||||| |||||||||||||| |||||||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgc 11282110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 30336602 - 30336507
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| ||||||  |||||||||||||||| ||||||| ||| |||||||||||||| |||||||||  ||| |||||||||||||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagcc 30336507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 45112891 - 45112971
Alignment:
Q  237 ccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||||| |||||||||| | | |||||||||||||||| |||||| | ||||||||| |||||||||||||    
T  45112891 ccctaactttcaaaaatttgtaattttagtctctaagtacaaaaattataattttggtcccctaagaattagcccctttgc 45112971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 1823552 - 1823654
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 313  Q
    |||||||||| |||||||||||  ||||||| ||||||||| ||||||| ||| ||||||||||||| |||||||| |  ||||||||||||||||| ||    
T  1823552 ggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatt 1823651  T
Q  314 tgc 316  Q
    |||    
T  1823652 tgc 1823654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 1857997 - 1858099
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 313  Q
    |||||||||| |||||||||||  ||||||| ||||||||| ||||||| ||| ||||||||||||| |||||||| |  ||||||||||||||||| ||    
T  1857997 ggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatt 1858096  T
Q  314 tgc 316  Q
    |||    
T  1858097 tgc 1858099  T

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Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 2380021 - 2379931
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    |||||||||  |||||| ||||||||||||||||| |||||||||||||||||| ||||  ||| ||||||||| ||||| |||||||||||    
T  2380021 ggctaaagtttacttttccccctaactttcaaaaagttgtaattttggcccctatgtac-gaaactacaattttggccccttaagatttagc 2379931  T

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Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 18970930 - 18971012
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccct-aagatttagcccctttgc 316  Q
    |||||||||||||||| |||  |||||||||||| |||||||||||| |||||||||| ||||| |||||||| |||||||||    
T  18970930 cccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgc 18971012  T

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Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 22220386 - 22220490
Alignment:
Q  216 ttggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagcccc 311  Q
    ||||||||||||||||||| |||  |||||||| ||| ||||| |||||||  |||||| ||| ||||| ||||||||| |||||||||||||||||||     
T  22220386 ttggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagccca 22220485  T
Q  312 tttgc 316  Q
    |||||    
T  22220486 tttgc 22220490  T

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Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 24488760 - 24488679
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagcccctttgc 316  Q
    ||||||||||||||||||||| |||||||| ||||||| ||  ||||  ||||||||||||| |||||||||||||| ||||    
T  24488760 cccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttgccccgtaagatttagccccattgc 24488679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 5514370 - 5514270
Alignment:
Q  218 ggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttgccccctaagatttagcccctttg 315  Q
    ||||||||||||||||| |||||||| ||| ||||||||| |||||| |||  |||| |||||||| |||||||||| || |||| ||||||||| ||||    
T  5514370 ggctaaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttgacctctaaaatttagcccatttg 5514271  T
Q  316 c 316  Q
    |    
T  5514270 c 5514270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 12351921 - 12352016
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||| |||  ||||  ||||||||||||| ||| ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||    
T  12351921 ggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcc 12352016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 5003197 - 5003103
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtac-aaaaattacaattttgccccctaagatttagccc 310  Q
    |||||||| |||||||  |||||||||||||||| |||| ||||||   ||||||||||| |||||  ||||||||| |||||||||||||||||    
T  5003197 ggctaaagcgcactttcccccctaactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttgtcccctaagatttagccc 5003103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 18979220 - 18979119
Alignment:
Q  219 gctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    |||||||||||||||| ||||  |||||||||| |||||| |||||||| ||||||| || ||||| ||||||||| ||||| || |||||||||| |||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccattt 18979121  T
Q  315 gc 316  Q
    ||    
T  18979120 gc 18979119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 309
Target Start/End: Original strand, 24359809 - 24359902
Alignment:
Q  218 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||| ||||||||| |||||||| ||||| |||  ||||| ||| |||  |||||||| |||||||||| |||||||||||||||||    
T  24359809 ggctaaagtgctctttttccctctaacttttaaaaagttgcgatttttgcctctatatacaaaaactacaattttgaccccctaagatttagcc 24359902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 11283310 - 11283208
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    |||||||||||| |||  ||||  ||||||||||||| |||||||||| | |||||| ||| |||||| |||||||| | ||||||| ||||||||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagcccctt 11283211  T
Q  314 tgc 316  Q
    |||    
T  11283210 tgc 11283208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 30570353 - 30570255
Alignment:
Q  221 taaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||| |||||||||  || ||| ||||| ||| |||||||  || || |||||||||||| ||||||| |||||||||||||||||| |||||    
T  30570353 taaagtgcaccttttcccctctaagttttaaaaagttgcaattttgatccttatgtacaaaaattagaattttggccccctaagatttagcccttttgc 30570255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 315
Target Start/End: Complemental strand, 40471244 - 40471147
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttg 315  Q
    |||||||||||||| ||||  ||||||| ||||||||  |||||||| || ||| |||||||| ||||||||| ||||| ||||||||| || |||||    
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttggtccataaatacaaaaactacaattttagccccttaagatttaacctctttg 40471147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 24122883 - 24122976
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    |||||||||||| |||| |||| ||||||| ||||| ||| |||||||  |||||||||||||||| || |||||| | |||||||||||||||    
T  24122883 ggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagc 24122976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 11288961 - 11288914
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaatttt 263  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||    
T  11288961 ggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaa 281  Q
    |||||||||||| |||  ||||||| ||||||||||||| |||||||  ||||||||||||||||    
T  23170098 ggctaaagtgcattttcccccctaattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 24483141 - 24483196
Alignment:
Q  216 ttggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccc 269  Q
    ||||||||||||||||||| |||  |||| ||||||||||||| ||||||||||||    
T  24483141 ttggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggcccc 24483196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 45114617 - 45114526
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagattta 306  Q
    |||| |||||||||||| |  |||||||||||||||||||| ||||||||  | ||| ||||| ||| |||||||||| || ||||||||||    
T  45114617 ggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttggcctctaagattta 45114526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 8389787 - 8389690
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccctaa-gtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    |||||||||||||| |||   ||| ||||||||| ||| |||||||| |||| | ||||||||| ||||||||| | ||||||||||||| |||||||    
T  8389787 taaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaaccccttt 8389690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 315
Target Start/End: Original strand, 40469356 - 40469441
Alignment:
Q  232 ttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttg 315  Q
    ||||||| ||||||||||||| ||||||||||   || |||| ||||||||||||||||||  || | |||||||||| |||||||    
T  40469356 ttttcccttaactttcaaaaatttgtaattttcatcctctaaatacaaaaattacaattttaaccacataagatttagtccctttg 40469441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 43661267 - 43661367
Alignment:
Q  220 ctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccctaa-gtacaaaaattacaattttg-ccccctaagatttagcccctttg 315  Q
    |||||||||||||||   ||| ||| ||| ||||| ||  |||||||| |||| | ||||||||| || ||||||| |||||||||||||||||||||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttg 43661366  T
Q  316 c 316  Q
    |    
T  43661367 c 43661367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 32974039 - 32973984
Alignment:
Q  216 ttggctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccc 269  Q
    ||||||||||||||||||||  ||||||||||||||||  |||  |||||||||||    
T  32974039 ttggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggcccc 32973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 18371422 - 18371518
Alignment:
Q  216 ttggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    ||||||||||||||||||| |||  |||||||||||||||||| |||||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  18371422 ttggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagc 18371518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 22629505 - 22629588
Alignment:
Q  235 tcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  22629505 tcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcccctttgc 22629588  T

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Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 127337 - 127431
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagccc 310  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||| ||||  ||||||| |||||||||||||||||||    
T  127337 ggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaatttagccccctaagatttagccc 127431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 18372538 - 18372457
Alignment:
Q  236 cccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttg 315  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  18372538 cccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttg 18372457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 31659620 - 31659725
Alignment:
Q  216 ttggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagccc 310  Q
    ||||||||||||||||||| ||||   ||||||||||||||||  ||||||| |||| |||||||||||| ||||||||| |||||||||||||||||||    
T  31659620 ttggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccc 31659719  T
Q  311 ctttgc 316  Q
    | ||||    
T  31659720 cattgc 31659725  T

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Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 21505416 - 21505516
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 315  Q
    ||||||||||||||||| ||||||||||||||||| |||  ||||||| |||| |  |||||||| |||||||||| |||| ||||||||||||||||||    
T  21505416 ggctaaagtgcacttttccccctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccctttg 21505515  T
Q  316 c 316  Q
    |    
T  21505516 c 21505516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 3227695 - 3227593
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||||||||| ||||  ||||||| || |||||||||||||||||| |    
T  3227695 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagccccat 3227596  T
Q  314 tgc 316  Q
    |||    
T  3227595 tgc 3227593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 47369796 - 47369883
Alignment:
Q  231 tttttcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||||||||||||||| |||||| ||| | |||||||||||| || |||||| ||||| |||||||||||||||||||    
T  47369796 tttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctttgc 47369883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 22630553 - 22630452
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| || |  ||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| ||||||||||||| |||| |||    
T  22630553 ggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctctt 22630454  T
Q  314 tg 315  Q
    ||    
T  22630453 tg 22630452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 7500455 - 7500556
Alignment:
Q  218 ggctaaagtgcactttttcccct-aactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 314  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||  || ||||||| | |||  ||||||||| ||||||||||||||||||||||    
T  7500455 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagccccttt 7500554  T
Q  315 gc 316  Q
    ||    
T  7500555 gc 7500556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 17782654 - 17782558
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccc 310  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||    
T  17782654 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 17782558  T

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Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 7501953 - 7501851
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||  ||||  |||||||| ||||| |||||| |||||||||    
T  7501953 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccctt 7501854  T
Q  314 tgc 316  Q
    |||    
T  7501853 tgc 7501851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 31949322 - 31949424
Alignment:
Q  218 ggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| ||  ||||| ||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  31949322 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 31949421  T
Q  314 tgc 316  Q
    |||    
T  31949422 tgc 31949424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 42886384 - 42886285
Alignment:
Q  221 taaagtgcactttt-tcc-cctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    |||||||||||||| ||| ||||||||||||||| ||| ||||||| |||| ||| |||||||| ||||||||| ||||||||||||||||||| |||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgc 42886285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 597381 - 597308
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg 292  Q
    |||||| ||||| |||||||||||||||||||||||||| ||||||| | | |||||||||||| ||||||||||    
T  597381 ggctaatgtgca-tttttcccctaactttcaaaaacttgaaattttgacgcataagtacaaaaactacaattttg 597308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 47525470 - 47525366
Alignment:
Q  216 ttggctaaagtgcactttttcccct--aactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccc 311  Q
    ||||||||||||||||||| |||||  |||||||||||||||| |||||| | ||||||||||  ||||  ||||||| | |||||||||||||||||||    
T  47525470 ttggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagcccc 47525371  T
Q  312 tttgc 316  Q
     ||||    
T  47525370 attgc 47525366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 48935006 - 48934902
Alignment:
Q  216 ttggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccc 311  Q
    |||||||||||||| |||| |  |||||||||||||||||||||||||||| ||| ||||||||||||| || |||||||  |||| |||| |||||||     
T  48935006 ttggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagccca 48934907  T
Q  312 tttgc 316  Q
    |||||    
T  48934906 tttgc 48934902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 316
Target Start/End: Original strand, 3227109 - 3227209
Alignment:
Q  219 gctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccc-taagatttagcccctttg 315  Q
    |||||||||||||||  |||| ||| ||||||||||||| |||||||| ||||||||||| ||||  ||||||| |||||| |||||||||||||| |||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagatttagccccattg 3227208  T
Q  316 c 316  Q
    |    
T  3227209 c 3227209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 31949903 - 31949801
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 313  Q
    |||||||||||||| || ||||  ||||||||||||||||| |||||||| ||||||| ||| ||||  ||||||| || |||||||||||||||||| |    
T  31949903 ggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagatttagccccat 31949804  T
Q  314 tgc 316  Q
    |||    
T  31949803 tgc 31949801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 17781663 - 17781763
Alignment:
Q  220 ctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattt-tgccccctaagatttagcccctttg 315  Q
    ||||||||||||||| ||||  ||||||||||||||||| |||||||  ||||||||||| ||||  |||||||   ||||||||||||||||||| |||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattg 17781762  T
Q  316 c 316  Q
    |    
T  17781763 c 17781763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 316
Target Start/End: Complemental strand, 14999249 - 14999154
Alignment:
Q  223 aagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgcc-ccctaagatttagcccctttgc 316  Q
    |||||||||||| |||| ||| |||||||| |||| ||||||| |||| ||| |||||||| |||||||||| | ||||||||||||||||||||||    
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgc 14999154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 11658374 - 11658480
Alignment:
Q  213 atattggctaaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttgccccct-aagatttagc 308  Q
    |||| ||||||| ||||||||| ||||  |||||||||||||| || |||||| | |||||| ||||||||| ||||||||||  |||| |||| |||||    
T  11658374 atataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctcaagaattagc 11658473  T
Q  309 ccctttg 315  Q
    |||||||    
T  11658474 ccctttg 11658480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 20163657 - 20163585
Alignment:
Q  218 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaa 287  Q
    ||||||||||||||| | |  |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||    
T  20163657 ggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 11662649 - 11662550
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 316  Q
    ||||||||| |||| ||||  ||||||||||||||||| |||||| || | ||| ||||||||| || |||||| |||||| |||| |||||||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccctttgc 11662550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 14998008 - 14998062
Alignment:
Q  218 ggctaaagtgcac---tttttcccctaactttcaaaaacttgtaattttggcccc 269  Q
    |||||||||||||   |||||||||||||||||||||||||  ||||||||||||    
T  14998008 ggctaaagtgcacctttttttcccctaactttcaaaaacttacaattttggcccc 14998062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 43899448 - 43899523
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg 292  Q
    ||||||||| || |||||||| ||||||||||||||||| |||||||  |  |||| || ||||||||||||||||    
T  43899448 ggctaaagtacattttttcccttaactttcaaaaacttgcaattttgatcttctaaatataaaaattacaattttg 43899523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 34174083 - 34174018
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaa 281  Q
    ||||||||||||||||| |||| || ||||||||| |||| |||||||| ||||||||||| ||||    
T  34174083 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaa 34174018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 128699 - 128600
Alignment:
Q  221 taaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||||||||||| || |  ||||||||||||| ||| |||||||  ||||||||||| ||||  ||||||| | |||||||||||| |||||| ||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagccccattgc 128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 14998042 - 14998082
Alignment:
Q  277 aaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  14998042 aaaacttacaattttggccccctaagatttagcccctttgc 14998082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 47524532 - 47524591
Alignment:
Q  225 gtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaa 281  Q
    |||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaa 47524591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 17470 - 17572
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 313  Q
    ||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||| ||||||||| |||||| |||| ||| ||||||    
T  17470 ggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccctt 17569  T
Q  314 tgc 316  Q
    |||    
T  17570 tgc 17572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 316
Target Start/End: Complemental strand, 18878 - 18775
Alignment:
Q  217 tggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccct 312  Q
    |||||||||||||||||||||  ||||||||| ||||| ||| |||||||| |||||| ||||||||| || |||||| ||||| ||| ||||||||||     
T  18878 tggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagcccca 18779  T
Q  313 ttgc 316  Q
    ||||    
T  18778 ttgc 18775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 311
Target Start/End: Complemental strand, 5539 - 5442
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgccccc-taagatttagcccc 311  Q
    ||||||||||||||||| ||||  ||| ||||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  5539 ggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcccc 5442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 311
Target Start/End: Original strand, 4442 - 4539
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaatttt-gccccctaagatttagcccc 311  Q
    ||||||||||||| ||||||||  ||| ||||||||||||  |||||| |||||| |||||||||||||||||||||  |||||||| ||||||||||    
T  4442 ggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagcccc 4539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 23079 - 23181
Alignment:
Q  216 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 313  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||| ||||  ||||| |||| |||||||| ||||||||| |    
T  23079 ttggctaaagtgcacttttccccctaactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagccccat 23178  T
Q  314 tgc 316  Q
    |||    
T  23179 tgc 23181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 23991 - 23941
Alignment:
Q  218 ggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttggc 266  Q
    |||||||||||||||||| |  ||||||||||||||||||| |||||||||    
T  23991 ggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggc 23941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 9126 - 9032
Alignment:
Q  218 ggctaaagtgcactttttcc-cctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttgccccctaagatttagccc 310  Q
    |||||||||||||||||||| ||| | ||||||||| |||| ||||| ||| |||| ||||||||| |||||||||| |||||||||||||||||    
T  9126 ggctaaagtgcactttttcctccttaatttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttggcccctaagatttagccc 9032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 6394 - 6438
Alignment:
Q  266 cccctaagtacaaaaattacaattttg-ccccctaagatttagcc 309  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||    
T  6394 cccctatgtacaaaaactacaattttgaccccctaagatttagcc 6438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 60088 - 60192
Alignment:
Q  216 ttggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccc 311  Q
    |||||||||||||||||||  ||| |||||||| ||||||||| ||||||| |||| || ||| ||||| |||||||||| ||||||| |||||||||||    
T  60088 ttggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccc 60187  T
Q  312 tttgc 316  Q
    |||||    
T  60188 tttgc 60192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 61559 - 61458
Alignment:
Q  219 gctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagccccttt 314  Q
    ||||||||||||||||  |||| ||| ||||||||||||| |||||| ||||| |||||||||||| || |||||| |||||||| |||||||||| |||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagccctttt 61460  T
Q  315 gc 316  Q
    ||    
T  61459 gc 61458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 2571 - 2472
Alignment:
Q  212 tatattggctaaagtgcactttttcccctaactttca-aaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||| |||||||  ||||||||||||||||  || ||||| |||||||| ||||||||    
T  2571 tatattagctaaagtgcacttttccccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 2472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 7194 - 7095
Alignment:
Q  212 tatattggctaaagtgcactttttcccctaactttca-aaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||| |||||||  ||||||||||||||||  || ||||| |||||||| ||||||||    
T  7194 tatattagctaaagtgcacttttccccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 7095  T

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Target: scaffold0112 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 37142 - 37244
Alignment:
Q  212 tatattggctaaagtgcactttttcccctaac-tttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagc 308  Q
    ||||||||||||||||||||||| |||||| | ||| ||||| ||| |||||||  ||||||||||||||||  |||||||| |||||||| ||||||||    
T  37142 tatattggctaaagtgcacttttccccctatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagc 37241  T
Q  309 ccc 311  Q
    |||    
T  37242 ccc 37244  T

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Target: scaffold0112; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 311
Target Start/End: Complemental strand, 40684 - 40641
Alignment:
Q  268 cctaagtacaaaaattacaattttgccccctaagatttagcccc 311  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  40684 cctaagtacaaaaataacaattttgtcccctaagatttagcccc 40641  T

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Target: scaffold0632 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 3408 - 3307
Alignment:
Q  218 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgc-cccctaagatttagccccttt 314  Q
    ||||||||||||||||| |||| | ||||||||||||||  ||||||| |||| || ||||||||| || |||||||  |||||||||||||||||||||    
T  3408 ggctaaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagccccttt 3309  T
Q  315 gc 316  Q
    ||    
T  3308 gc 3307  T

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Target: scaffold2034 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 232 - 335
Alignment:
Q  217 tggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgc-cccctaagatttagcccct 312  Q
    |||||||||||||||||  ||||  ||||||||||||| ||| |||||||| |||||| ||||||||| || |||||||  ||||||||| |||||||||    
T  232 tggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccct 331  T
Q  313 ttgc 316  Q
    ||||    
T  332 ttgc 335  T

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Target: scaffold0320 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 19488 - 19590
Alignment:
Q  218 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgc-cccctaagatttagcccctt 313  Q
    |||||||||||| |||| ||||  ||| |||||||| |||| |||||||||||| |||||| ||||| ||||||||||  ||||||||||||| ||||||    
T  19488 ggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccctt 19587  T
Q  314 tgc 316  Q
    |||    
T  19588 tgc 19590  T

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Target: scaffold0369 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 13193 - 13283
Alignment:
Q  218 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaa-ttttgccccctaagattta 306  Q
    ||||||||||||||||| ||||||||||| ||||| |||| |||||| || |||| |||| |||| ||||| ||||| |||||||||||||    
T  13193 ggctaaagtgcacttttccccctaactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttttgtcccctaagattta 13283  T

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Target: scaffold0059 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 3690 - 3770
Alignment:
Q  231 tttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||| | ||| || |||||| | ||||||||||||||||    
T  3690 tttttcccctaactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagcc 3770  T

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Target: scaffold0059; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 4829 - 4729
Alignment:
Q  219 gctaaagtgcactttttc-ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 315  Q
    |||||||||||||||  | |||||||||| |||||| || |||||||| ||||||| |||| ||| |||||||||| ||| ||||  ||||||||| |||    
T  4829 gctaaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccctctaaattttagccccattg 4730  T
Q  316 c 316  Q
    |    
T  4729 c 4729  T

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Target: scaffold1303 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 1439 - 1541
Alignment:
Q  218 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    |||||||||| |||||| |||||  |||||| ||||||||| ||||||| |||| || ||| ||||| || ||||||| |||||||||||||||||| ||    
T  1439 ggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccatt 1538  T
Q  314 tgc 316  Q
    |||    
T  1539 tgc 1541  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 49534 - 49432
Alignment:
Q  218 ggctaaagtgcactttt-tcccct-aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 313  Q
    ||||||||||||||||| |||||| |||||| ||||| ||| |||||||||||| ||   | ||||| |||||||||| |||||||||||||||| ||||    
T  49534 ggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctt 49435  T
Q  314 tgc 316  Q
    |||    
T  49434 tgc 49432  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 7465 - 7414
Alignment:
Q  266 cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 316  Q
    |||||| ||||| ||| |||||||||| ||||||||||||||||||||||||    
T  7465 cccctatgtacagaaactacaattttgaccccctaagatttagcccctttgc 7414  T

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