View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1113_low_3 (Length: 553)
Name: NF1113_low_3
Description: NF1113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1113_low_3 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 509; Significance: 0; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 30 - 542
Target Start/End: Complemental strand, 39475827 - 39475315
Alignment:
| Q |
30 |
catggtggtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgttttacgtttggtttc |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39475827 |
catggtggtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgttttacgtttggtttc |
39475728 |
T |
|
| Q |
130 |
tgagcttcgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgatgatgttgagagattctgagatag |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39475727 |
tgagcttcgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgatgatgttgagagattctgagatag |
39475628 |
T |
|
| Q |
230 |
gaagggatttagtgttgacatcattttctgttatgtgtgggaatttgataactaaaacagttgctcggagacggttatcacgattgattagaagcttcac |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39475627 |
gaagggatttagtgttgacatcattttctgttatgtgtgggaatttgataactaaaacagttactcggagacggttatcacgattgattagaagcttcac |
39475528 |
T |
|
| Q |
330 |
aaactcaagtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttcttcatcttggatatacacttgatcagtgtgactgtg |
429 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39475527 |
aaactcaagtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttcttcatcttggatatacacttgatcagtgtgactgtg |
39475428 |
T |
|
| Q |
430 |
ttttgaattgttgttttgatgttcctgttatttaaataggaataggaatagtgtagataattattagtatgaatataattatattatactaggagtgttt |
529 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39475427 |
ttttgaattgttgttttgatgttcctgttatttaaataggaataggaatagtgtagataattattagtatgaatataattatattatactaggagtgttt |
39475328 |
T |
|
| Q |
530 |
gatgcatgttctt |
542 |
Q |
| |
|
||||||||||||| |
|
|
| T |
39475327 |
gatgcatgttctt |
39475315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 30 - 402
Target Start/End: Complemental strand, 39451321 - 39450949
Alignment:
| Q |
30 |
catggtggtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgttttacgtttggtttc |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||| ||||| || |||| ||| |||||||||||| || || |||||||| || ||||||||| |
|
|
| T |
39451321 |
catggtggtgcagaacatgtcaacaacgatggtggcgaggactccattttctcctcctccagtagtgaggttagaaacggcttgtttgacatttggtttc |
39451222 |
T |
|
| Q |
130 |
tgagcttcgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgatgatgttgagagattctgagatag |
229 |
Q |
| |
|
||||||||||||||||| | |||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
39451221 |
tgagcttcgaggagagcaggcatggaagcgaaacctggattggtgtttggaggaagagaaacttctggaaggttgatgatgttgagagaatctgagatag |
39451122 |
T |
|
| Q |
230 |
gaagggatttagtgttgacatcattttctgttatgtgtgggaatttgataactaaaacagttgctcggagacggttatcacgattgattagaagcttcac |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
39451121 |
gaagggatttagtgttgacatcattttctgatatatgtgggaatttgataactaaaacagttactcggagacggttatcacgattgattagaagcttcgc |
39451022 |
T |
|
| Q |
330 |
aaactcaagtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttcttcatcttg |
402 |
Q |
| |
|
|| ||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39451021 |
gaattcaagggtggaaactagatggctcacaccaggaaaagggataaacaccacttctgctttcttcatcttg |
39450949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 37 - 404
Target Start/End: Complemental strand, 39472344 - 39471983
Alignment:
| Q |
37 |
gtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgttttacgtttggtttctgagctt |
136 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||| ||||| || || ||| ||| ||||||| || || ||||||| ||||||||||||||||||| |
|
|
| T |
39472344 |
gtgcagaacatgtcaacaacaaaagcggcaaggactccatttt---ctgatctggtaatgaggttagatactacttgtttgacgtttggtttctgagctt |
39472248 |
T |
|
| Q |
137 |
cgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgatgatgttgagagattctgagataggaaggga |
236 |
Q |
| |
|
||||||| || ||||| |||| |||| |||| |||||||||| ||||||| |||||||||||||||||||| ||| || || |||||||||||||| |
|
|
| T |
39472247 |
cgaggagcgcagtcat---agagggaccttgatctgtgtttggggcaagagaacattctggaaggttgatgatgtggagtgaatcggagataggaaggga |
39472151 |
T |
|
| Q |
237 |
tttagtgttgacatcattttctgttatgtgtgggaatttgataactaaaacagttgctcggagacggttatcacgattgattagaagcttcacaaactca |
336 |
Q |
| |
|
|||||||| |||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
39472150 |
tttagtgtagacatcggtttctgtgatgtgtgggaatttgataactaaaacagttattcggagacggttatcacggttgattagaagcttcgcaaactcg |
39472051 |
T |
|
| Q |
337 |
agtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttcttcatcttgga |
404 |
Q |
| |
|
|| | |||| || ||| | | | | |||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
39472050 |
agagcagaaactatatgaccctcagccggaaaagggacaaacaccacttctgctttcttcatcttgga |
39471983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 30 - 405
Target Start/End: Complemental strand, 39486786 - 39486405
Alignment:
| Q |
30 |
catggtggtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgt---tgtccttctctagtagtgaggttggagacagcttgttttacgtttggt |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
39486786 |
catggtggtgcagaacatgtcaacaacgaaggcggcaaggtgtccaggtggttgtccttctctagtagtgaggttggatacagcttgtttgacgtttggt |
39486687 |
T |
|
| Q |
127 |
ttctgagcttcgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgatgatgttgagagattctgaga |
226 |
Q |
| |
|
||||||||||| |||||||| ||||| | |||| ||| ||||||||||||||||||||| ||||||||||||||||| | |||||| || || | |
|
|
| T |
39486686 |
ttctgagcttcaaggagagcgttcatgaca---aaacgtggttcggtgtttgggggaagagaacattctggaaggttgatgacctggagagaatcggaaa |
39486590 |
T |
|
| Q |
227 |
taggaagggatttagtg------ttgacatcattttctgttatgtgtgggaatttgataactaaaacagttgctcggagacggttatcacgattgattag |
320 |
Q |
| |
|
| ||||||||||| ||| | |||||| | ||||| |||||||||||||||| || || | ||| |||||||||||||||||| |||||||| |
|
|
| T |
39486589 |
tgggaagggattttgtgtagacatcgacatcgtcatctgtggtgtgtgggaatttgatgaccaagatggttattcggagacggttatcacggttgattag |
39486490 |
T |
|
| Q |
321 |
aagcttcacaaactcaagtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttcttcatcttggat |
405 |
Q |
| |
|
|||||| |||| ||||| ||||||| |||||| | | ||| || ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
39486489 |
aagctttgcaaattcaagggtggaaactagatgaccaacaccaggtgaagggataatcaccacttctgctttcttcatcttggat |
39486405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 37 - 404
Target Start/End: Complemental strand, 39460561 - 39460197
Alignment:
| Q |
37 |
gtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgttttacgtttggtttctgagctt |
136 |
Q |
| |
|
|||||||||||||||||||| ||||| | |||| |||||||| | || |||||||||| || || || |||||||| ||||||| ||||||||||| |
|
|
| T |
39460561 |
gtgcagaacatgtcaacaacaaaggctgtgagggttccatgtttttctctagtagtagtgagattagatacggcttgtttgacgtttgatttctgagctt |
39460462 |
T |
|
| Q |
137 |
cgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgatgatgttgagagattctgagataggaaggga |
236 |
Q |
| |
|
|||||| ||| |||| || | ||| ||| ||||||||||||||||||||||||||||||||||||||| |||||| || || | ||||| || |
|
|
| T |
39460461 |
cgaggaaagccatcattctgga---agttggttcgatgtttgggggaagagaaacttctggaaggttgatgatgtcgagagaatcagaagtgggaagtga |
39460365 |
T |
|
| Q |
237 |
tttagtgttgacatcattttctgttatgtgtgggaatttgataactaaaacagttgctcggagacggttatcacgattgattagaagcttcacaaactca |
336 |
Q |
| |
|
||||||||| ||||| ||||| | ||| ||||| ||| || |||| ||||| |||||| || |||||||| ||| |||||||||| | |||||| |
|
|
| T |
39460364 |
tttagtgttaacatcggattctgatgtgtatgggagtttcatgactaggacagtaattcggaggcgcttatcacggttggttagaagctttgcgaactca |
39460265 |
T |
|
| Q |
337 |
agtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttcttcatcttgga |
404 |
Q |
| |
|
|| |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39460264 |
agggtggaatctagatggctcggaccgggaaaagggataaacacaacttctgctttcttcatcttgga |
39460197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 30 - 206
Target Start/End: Complemental strand, 39483578 - 39483405
Alignment:
| Q |
30 |
catggtggtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgttttacgtttggtttc |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
39483578 |
catggtggtgcagaacatgtcaacaacgaaggcggagaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgtattatgtttggtttc |
39483479 |
T |
|
| Q |
130 |
tgagcttcgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgat |
206 |
Q |
| |
|
|||||||| |||||||| | |||| || || || ||||| ||||||||||||| || ||||||||||||||| |
|
|
| T |
39483478 |
tgagcttcaaggagagcgttgatggcag---aaactagatcgaagtttgggggaagataacattctggaaggttgat |
39483405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 37 - 398
Target Start/End: Complemental strand, 39454947 - 39454592
Alignment:
| Q |
37 |
gtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgttttacgtttggtttctgagctt |
136 |
Q |
| |
|
|||||| |||||||||||||||| || |||||| |||| ||| |||| | |||| ||||||| || || |||||||| ||||||||||||||||||| |
|
|
| T |
39454947 |
gtgcaggacatgtcaacaacgaaagctgcgaggactccac-ttg--cttcaccagtaatgaggttagatacggcttgtttgacgtttggtttctgagctt |
39454851 |
T |
|
| Q |
137 |
cgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgatgatgttgagagattctgagataggaaggga |
236 |
Q |
| |
|
| ||| |||| | |||||| || | |||||| ||||||||||||||||| ||||||||||||||||||| || || || ||||| ||||| || |
|
|
| T |
39454850 |
caaggtgagcggacatggaggaaa---ctggattagtgtttgggggaagagagcattctggaaggttgatgatgcggattgaatcggagattggaagaga |
39454754 |
T |
|
| Q |
237 |
tttagtgttgacatcattttctgttatgtgtgggaatttgataactaaaacagttgctcggagacggttatcacgattgattagaagcttcacaaactca |
336 |
Q |
| |
|
|||| ||| |||||| |||| || |||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||| | |||||| |
|
|
| T |
39454753 |
tttactgtatacatcagtttcagtggcgtgtggaaatttgaggactaaaacagttattcggagacggttatcacggttgattagaagtttcgcgaactca |
39454654 |
T |
|
| Q |
337 |
agtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttcttcat |
398 |
Q |
| |
|
|| ||||||| || ||||| | ||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
39454653 |
agggtggaaactaaatggccaacaccaggagaagggataaacaccacttctgctttcttcat |
39454592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 37 - 404
Target Start/End: Original strand, 39470618 - 39470979
Alignment:
| Q |
37 |
gtgcagaacatgtcaacaacgaaggcggcgaggtgtccatgttgtccttctctagtagtgaggttggagacagcttgttttacgtttggtttctgagctt |
136 |
Q |
| |
|
||||||||||||||||||| || ||||||||| ||||||||||| |||| ||||||||||||||||| ||||||||| ||||||| ||| ||||||| |
|
|
| T |
39470618 |
gtgcagaacatgtcaacaatgacagcggcgaggggtccatgttgt---tctccagtagtgaggttggagatagcttgtttgacgtttgctttatgagctt |
39470714 |
T |
|
| Q |
137 |
cgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttctggaaggttgatgatgttgagagattctgagataggaaggga |
236 |
Q |
| |
|
|||||||||| |||| | |||||||||| | | ||||| ||| ||||||||||||||||||||||| | |||||| || ||||| |||| ||| |
|
|
| T |
39470715 |
cgaggagagcgttcat---atccgaacctggatcagaggttgggagaacagaaacttctggaaggttgatgacatggagagaatcagagatgggaatgga |
39470811 |
T |
|
| Q |
237 |
tttagtgttgacatcattttctgttatgtgtgggaatttgataactaaaacagttgctcggagacggttatcacgattgattagaagcttcacaaactca |
336 |
Q |
| |
|
||||| || ||||||| ||||| ||||||||||||| || ||||| |||||| || ||| ||||||||| | |||||||||||||| | ||||| |
|
|
| T |
39470812 |
tttagcgtagacatcagattctgcagtgtgtgggaatttcatgactaagacagttattcagaggcggttatcatggttgattagaagcttggcgaactct |
39470911 |
T |
|
| Q |
337 |
agtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttcttcatcttgga |
404 |
Q |
| |
|
| | |||| |||||| | | | ||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
39470912 |
aaggcagaaactagatgacctacagcgggaaaagggataaacaccacttccactttcttcatgttgga |
39470979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 96 - 398
Target Start/End: Original strand, 39464451 - 39464750
Alignment:
| Q |
96 |
gaggttggagacagcttgttttacgtttggtttctgagcttcgaggagagctgtcatggaagagaaacctggatcggtgtttgggggaagagaaacttct |
195 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||||| ||||| || |||||||| |||| || | |||||||||| | | || ||||||||||||||||| |
|
|
| T |
39464451 |
gaggttagagacggcttgtttgacgtttggtttgtgagcatcaaggagagcgttcat---agcggaacctggatcagaggtttggggaagagaaacttct |
39464547 |
T |
|
| Q |
196 |
ggaaggttgatgatgttgagagattctgagataggaagggatttagtgttgacatcattttctgttatgtgtgggaatttgataactaaaacagttgctc |
295 |
Q |
| |
|
||||||||||||| || ||||| || || || |||| ||||||||||| |||||| ||||| | ||||||| |||||| ||||| | ||| || |
|
|
| T |
39464548 |
ggaaggttgatgacattaagagaatcagatatgggaatggatttagtgtagacatcggattctgcggtttgtgggagtttgatgactaagatggttattc |
39464647 |
T |
|
| Q |
296 |
ggagacggttatcacgattgattagaagcttcacaaactcaagtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttctt |
395 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||||||| | |||| |||||| | | | ||||||||||||||||||| |||||||||||||| |
|
|
| T |
39464648 |
ggagacggttatcacggttgattagaagcttcgcaaactcaagggcagaaactagatgacctacagcgggaaaagggataaacactacttctgctttctt |
39464747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 174 - 424
Target Start/End: Original strand, 39458286 - 39458536
Alignment:
| Q |
174 |
gtttgggggaagagaaacttctggaaggttgatgatgttgagagattctgagataggaagggatttagtgttgacatcattttctgttatgtgtgggaat |
273 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||| ||||| || ||| | |||||||||||||| |||||| |||||||| ||||||| ||| |
|
|
| T |
39458286 |
gtttgggggaagagaacattctggaaggtcgacaatgttaagagaatcgtcgatggcaagggatttagtgtagacatctatttctgttgtgtgtggaaat |
39458385 |
T |
|
| Q |
274 |
ttgataactaaaacagttgctcggagacggttatcacgattgattagaagcttcacaaactcaagtgtggaaattagatggctcagaccgggaaaaggga |
373 |
Q |
| |
|
|| || || || | |||| |||||||||||||||||| |||||||||||||| |||| || || ||||||| |||||| | | ||| || ||| || |
|
|
| T |
39458386 |
ttcatgaccaagatagttattcggagacggttatcacggttgattagaagctttgcaaattcgagggtggaaactagatgaccaacaccaggtgaagaga |
39458485 |
T |
|
| Q |
374 |
taaacaccacttctgctttcttcatcttggatatacacttgatcagtgtga |
424 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||| ||||| ||||||||| |
|
|
| T |
39458486 |
taatcaccacttctgctttcttcatcctggatatgcacttactcagtgtga |
39458536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 424
Target Start/End: Complemental strand, 39480441 - 39480300
Alignment:
| Q |
283 |
aaaacagttgctcggagacggttatcacgattgattagaagcttcacaaactcaagtgtggaaattagatggctcagaccgggaaaagggataaacacca |
382 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||||||| | || ||||| ||||||| |||||| | | ||| || ||||||||| ||||| |
|
|
| T |
39480441 |
aaaacagttattcggagacggttatcacggttgattagaagcttcgcgaattcaagggtggaaactagatgaccaacaccaggtgaagggataatcacca |
39480342 |
T |
|
| Q |
383 |
cttctgctttcttcatcttggatatacacttgatcagtgtga |
424 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||||||||| |
|
|
| T |
39480341 |
cttctgctttcttcatcctggatatgcacttactcagtgtga |
39480300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 399
Target Start/End: Original strand, 43312626 - 43312730
Alignment:
| Q |
295 |
cggagacggttatcacgattgattagaagcttcacaaactcaagtgtggaaattagatggctcagaccgggaaaagggataaacaccacttctgctttct |
394 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| |||||||||| ||||| | || ||| | || ||| ||| |||||||||||||||||||| ||||| |
|
|
| T |
43312626 |
cggagacggttatcacggttgatgagaagcttagcaaactcaagggtggatactaaatgtcccacacctggagaagggataaacaccacttctagtttct |
43312725 |
T |
|
| Q |
395 |
tcatc |
399 |
Q |
| |
|
||||| |
|
|
| T |
43312726 |
tcatc |
43312730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 39458207 - 39458259
Alignment:
| Q |
92 |
tagtgaggttggagacagcttgttttacgtttggtttctgagcttcgaggaga |
144 |
Q |
| |
|
|||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |
|
|
| T |
39458207 |
tagtgaggttggagacggcttttttgacgtttggtttctgagctttgaggaga |
39458259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 43312388 - 43312426
Alignment:
| Q |
30 |
catggtggtgcagaacatgtcaacaacgaaggcggcgag |
68 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
43312388 |
catggtggtgcagaacatgtcaacaacgaaggcagcgag |
43312426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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