View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1113_low_7 (Length: 303)
Name: NF1113_low_7
Description: NF1113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1113_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 52 - 296
Target Start/End: Original strand, 47261959 - 47262203
Alignment:
| Q |
52 |
tagcataggataggacaacaaaaacttaggaaattttacagatacagtataaccacaactaaatgataatgatctatattctatatatctaccaagtacc |
151 |
Q |
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| T |
47261959 |
tagcataggataggacaacaaaaacttaggaaattttacagatacagtataaccacaactaaatgataatgatctatattctatatatctaccaagtacc |
47262058 |
T |
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| Q |
152 |
aaccacataaagattaatatcatcaaaacttgacaaaagttgaagaaaacagtgtccaagtccaactaaccttatgcttggtccggagtaaccaaagcta |
251 |
Q |
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| T |
47262059 |
aaccaaataaagattaatatcatcaaaacttgacaaaagttgaagaaaacagtgtccaagtccaactaaccttatgcttggtccggagtaaccaaagcta |
47262158 |
T |
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| Q |
252 |
tttctagcaaccaaaccaatagcaaagttgttaaaatcagtggta |
296 |
Q |
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| T |
47262159 |
tttctagcaaccaaaccaatagcaaagttgttaaaatcagtggta |
47262203 |
T |
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