View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11142_high_32 (Length: 373)
Name: NF11142_high_32
Description: NF11142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11142_high_32 |
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Alignment Details
Target: chr3 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 46864556 - 46864888
Alignment:
| Q |
1 |
tcatatacgtgtgatagacatatatttctaacacctttaaatttgaatgaagatccattatcaatccacttgtatggttgatcaaaatctaacacaatta |
100 |
Q |
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| T |
46864556 |
tcatatacatgtgat-gacatatatttctaacacctttaaatttaaatgaagatccgttatcaatctacttgtatggttgatcaaaatctaacacaatta |
46864654 |
T |
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| Q |
101 |
ttatcatacttcttatgactcaacaaatatgaatagtataacaatgtaataaaaaagaggtgctcaaattctcaatatacggtccaaagtacttcaagac |
200 |
Q |
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| T |
46864655 |
ttctcatacttcttatgactcaacaaatattaatagtataacaatgtaataaaaaaaaggtgctcaaattctcaatatacggtccaaattacttcaagac |
46864754 |
T |
|
| Q |
201 |
ttatttagtaatagagaacatgcaatgctgatgtttacaatgaagataaatcaaccaaaatatgtggataacatttcagtgacattgaggtgctaatatc |
300 |
Q |
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| T |
46864755 |
ttatttagtaatagagaacatgcaatgctgatgtttacaatgaagataaatcaaccaaaatatgtgggtaatattttggtgacattgaggtgccaatatc |
46864854 |
T |
|
| Q |
301 |
atgtgtcattgatcaactataacatcacaagtgt |
334 |
Q |
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| T |
46864855 |
atgtgacattaatcaactataacatcacaagtgt |
46864888 |
T |
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